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USGS2021

Demographic response of brown treesnakes to extended population suppression

From a management perspective, reptiles are relatively novel invasive taxa. Few methods for reptile control have been developed and very little is known about their effectiveness for reducing reptile populations, particularly when the goal is eradication. Many reptiles, and especially snakes, are cryptic, secretive, and undergo extended periods of inactivity, traits that decrease detection probabilities and create challenges in estimating population size or evaluating management effects. The brown treesnake ( Boiga irregularis ) is a notorious invasive species that continues to cause major ecological and economic harm following their introduction to the island of Guam after World War II. They have been the subject of intensive research on the effectiveness of various techniques to control snakes, including the first ever aerial system for the distribution of toxic acetaminophen baits for reptile control. We provide a cohort-based life table for a cryptic and invasive reptile undergoing extended population control using toxic baits from March 2017–2020. We also evaluated the effects of single (toxic bait) versus multi-tool (toxic bait and live trapping) management efforts on population trajectories, and estimated which population vital rates are most important for influencing population growth or decline in a treated landscape. Treatment of the population with acetaminophen-laced baits resulted in an immediate reduction followed by a gradual population decline that suggested that eradication was the probable outcome given sufficient treatment time but that the period of treatment was decades in magnitude. Inclusion of live trapping reduced the predicted time required to achieve eradication by more than half. Preventing the transition of 1,000-mm snout-vent length (SVL) females to larger sizes was predicted to have the greatest effect on population reduction based on integral projection modeling. Our results suggest that toxic baits are capable of eradicating brown treesnakes in an enclosure, although inclusion of trapping reduced overall treatment time required. Tools that effectively target females >1,000 mm SVL may have the greatest effect on reducing overall treatment timelines.

Journal of Wildlife Management↗

USGS2019

Mapping a keystone shrub species, huckleberry (Vaccinium membranaceum), using seasonal colour change in the Rocky Mountains

Black huckleberries ( Vaccinium membranaceum ) provide a critical food resource to many wildlife species, including apex omnivores such as the grizzly bear ( Ursus arctos ), and play an important socioeconomic role for many communities in western North America, especially indigenous peoples. Remote sensing imagery offers the potential for accurate landscape-level mapping of huckleberries because the shrub changes colour seasonally. We developed two methods, for local and regional scales, to map a shrub species using leaf seasonal colour change from remote sensing imagery. We assessed accuracy with ground-based vegetation surveys. The high-resolution supervised random forest classification from one-meter resolution National Agricultural Imagery Program (NAIP) imagery achieved an overall accuracy of 75.31% (kappa = 0.26). The approach using multi-temporal 30-meter Landsat imagery similarly had an overall accuracy of 79.19% (kappa = .31). We found underprediction error was related to higher forest cover and a lack of visible colour change on the ground in some plots. Where forest cover was low, both models performed better. In areas with <10% forest cover, the high-resolution classification achieved an accuracy of 80.73% (kappa = 0.48), while the Landsat model had an accuracy of 82.55% (kappa = 0.47). Based on the fine-scale predictions, we found that 94% of huckleberry shrubs identified in our study area of Glacier National Park, Montana, USA are over 100 meters from human recreation trails. This information could be combined with productivity and phenology information to estimate the timing and availability of food resources for wildlife and to provide managers with a tool to identify and manage huckleberries. The development of the multi-temporal Landsat models sets the stage for assessment of impacts of disturbance at regional scales on this ecologically, culturally, and economically important shrub species. Our approach to map huckleberries is straightforward, efficient and accessible to wildlife and environmental managers and researchers in diverse fields.

Montana↗

USGS2023

Evaluating pharmaceuticals and other organic contaminants in the Lac du Flambeau Chain of Lakes using risk-based screening techniques

In an investigation of pharmaceutical contamination in the Lac du Flambeau Chain of Lakes (hereafter referred to as “the Chain”), few contaminants were detected; only eight pharmaceuticals and one pesticide were identified among the 110 pharmaceuticals and other organic contaminants monitored in surface water samples. This study, conducted in cooperation with the Lac du Flambeau Tribe’s Water Resource Program, investigated these organic contaminants and potential biological effects in channels connecting lakes throughout the Chain, including the Moss Lake Outlet site, adjacent to the wastewater treatment plant lagoon. Of the 6 sites monitored and 24 samples analyzed, sample concentrations and contaminant detection frequencies were greatest at the Moss Lake Outlet site; however, the concentrations and detection frequencies of this study were comparable to other pharmaceutical investigations in basins with similar characteristics. Because established water-quality benchmarks do not exist for the pharmaceuticals detected in this study, alternative screening-level water-quality benchmarks, developed using two U.S. Environmental Protection Agency toxicological resources (ToxCast database and ECOTOX knowledgebase), were used to estimate potential biological effects associated with the observed contaminant concentrations. Two contaminants (caffeine and thiabendazole) exceeded the prioritization threshold according to ToxCast alternative benchmarks, and four contaminants (acetaminophen, atrazine, caffeine, and carbamazepine) exceeded the prioritization threshold according to ECOTOX alternative benchmarks. Atrazine, an herbicide, was the most frequently detected contaminant (79% of samples), and it exhibited the strongest potential for biological effects due to its high estimated potency. Insufficient toxicological information within ToxCast and ECOTOX for gabapentin and methocarbamol (which had the two greatest concentrations in this study) precluded alternative benchmark development. This data gap presents unknown potential environmental impacts. Future research examining the biological effects elicited by these two contaminants as well as the others detected in this study would further elucidate the ecological relevance of the water chemistry results generated though this investigation.

Wisconsin↗

USGS2021

Effects of surveying for the federally endangered Spruce-fir Moss Spider (Microhexura montivaga Crosby & Bishop) on its bryophyte habitat

Microhexura montivaga (Spruce-fir Moss Spider) is a federally endangered arachnid endemic to high-elevation montane conifer forests of the southern Appalachian Mountains. The spider is cryptic and difficult to monitor because this species lives in the interface between the bryophyte mat and the rock surface. Since temporary removal of the bryophyte mat is necessary to monitor the spider, surveyors may negatively impact the spider's habitat during monitoring. To help inform survey protocol for this endangered species, we studied reattachment rates of bryophyte mats to rock surfaces after their removal. In 2017, we surveyed sixty 10 cm × 10 cm plots, assigning a plot to either control or treatment (i.e., application of water post-reattachment). We monitored plots for 1 year post-survey to determine reattachment rates. The majority of plots (70%) reestablished after 1 year, whereas 15% did not reattach or showed substantial prolonged (e.g., ∼1 year) desiccation and 15% completely fell off or had 100% prolonged desiccation and were chlorotic. We found that mat depth and overstory canopy cover had no effect on mat reestablishment, although bryophyte type did. We found no difference between treatment and control plots, suggesting that no treatment is needed for mats to reestablish under the conditions described. Rock slope significantly influenced reestablishment rates, highlighting that surveying bryophyte mats on slopes >80% may diminish or destroy habitat. Further research is needed to determine long-term monitoring effects on the spider and its habitat, especially in relation to disturbance regimes and ecological restoration of Picea rubens (Red Spruce).

Southeastern Naturalist↗

USGS2007

Multiple stressors in amphibian communities: Effects of chemical contamination, bullfrogs, and fish

A leading hypothesis of amphibian population declines is that combinations of multiple stressors contribute to declines. We examined the role that chemical contamination, competition, and predation play singly and in combination in aquatic amphibian communities. We exposed larvae of American toads (Bufo americanus), southern leopard frogs (Rana sphenocephala), and spotted salamanders (Ambystoma maculatum) to overwintered bullfrog tadpoles (R. catesbeiana), bluegill sunfish (Lepomis macrochirus), the insecticide carbaryl, and ammonium nitrate fertilizer in 1000-L mesocosms. Most significantly, our study demonstrated that the presence of multiple factors reduced survival of B. americanus and A. maculatum and lengthened larval periods of R. sphenocephala. The presence of bluegill had the largest impact on the community; it eliminated B. americanus and A. maculatum and reduced the abundance of R. sphenocephala. Chemical contaminants had the second strongest effect on the community with the insecticide, reducing A. maculatum abundance by 50% and increasing the mass of anurans (frogs and toads) at metamorphosis; the fertilizer positively influenced time and mass at metamorphosis for both anurans and A. maculatum. Presence of overwintered bullfrogs reduced mass and increased time to metamorphosis of anurans. While both bluegill and overwintered bullfrog tadpoles had negative effects on the amphibian community, they performed better in the presence of one another and in contaminated habitats. Our results indicate that predicting deleterious combinations from single-factor effects may not be straightforward. Our research supports the hypothesis that combinations of factors can negatively impact some amphibian species and could contribute to population declines. ?? 2007 by the Ecological Society of America.

Ecological Applications↗

USGS1963

Disease and infection in the Tetraonidae

Disease is one of many factors advanced to explain the fluctuations of grouse populations, but no profound study of natural disease losses in Tetraonidae exists. The literature contains frequent references to THE grouse disease, although many potential pathogens are listed in numerous surveys and limited investigations, and the relevant data indicate that no single etiologic agent is universally responsible for disease in grouse. Few experimental infections or related studies on parasite biology have been attempted. Well-trained personnel and specialized facilities are required for research and analysis (1) to develop new methods of interpretation to be used with existing census techniques, (2) to conduct intensive studies of ecological factors of host and habitat, and (3) to establish base lines for recognition of deviations from the norm. Disease in wildlife can be controlled only through management procedures based on information concerning the biology of pathogens, hosts, and environments. It cannot be studied as a separate entity if its impact on survival or population fluctuations of grouse is to be correctly assessed.

Journal of Wildlife Management↗

USGS2015

Biodiversity and Habitat Markets—Policy, Economic, and Ecological implications of Market-Based Conservation

This report is a primer on market-like and market-based mechanisms designed to conserve biodiversity and habitat. The types of markets and market-based approaches that were implemented or are emerging to benefit biodiversity and habitat in the United States are examined. The central approaches considered in this report include payments for ecosystem services, conservation banks, habitat exchanges, and eco-labels. Based on literature reviews and input from experts and practitioners, the report characterizes each market-based approach including policy context and structure; the theoretical basis for applying market-based approaches; the ecological effectiveness of practices and tools for measuring performance; and the future outlook for biodiversity and habitat markets. This report draws from previous research and serves as a summary of pertinent information associated with biodiversity and habitat markets while providing references to materials that go into greater detail on specific topics.

Circular↗

USGS2012

Strategic directions for U.S. Geological Survey water science, 2012-2022 - Observing, understanding, predicting, and delivering water science to the Nation

Executive Summary This report expands the Water Science Strategy that was begun in the USGS Science Strategy, “Facing Tomorrow’s Challenges—U.S. Geological Survey Science in the Decade 2007–2017” (U.S. Geological Survey, 2007). The report looks at the relevant issues facing society and develops a strategy built around observing, understanding, predicting, and delivering water science for the next 5 to 10 years by building new capabilities, tools, and delivery systems to meet the Nation’s water-resource needs. This report begins by presenting the vision of water science for the USGS and the societal issues that are influenced by, and in turn influence, the water resources of our Nation. The essence of the Water Strategic Science Plan is built on the concept of “water availability,” defined as spatial and temporal distribution of water quantity and quality, as related to human and ecosystem needs, as affected by human and natural influences . The report also describes the core capabilities of the USGS in water science—the strengths, partnerships, and science integrity that the USGS has built over its 130-year history. Nine priority actions are presented in the report, which combine and elevate the numerous specific strategic actions listed throughout the report. Priority actions were developed as a means of providing the audience of this report with a list for focused attention, even if resources and time limit the ability of managers to address all of the strategic actions in the report. Priority actions focus on the following: Improve integrated science planning for water. Expand and enhance water-resource monitoring networks. Characterize the water cycle through development of state-of-the-art 3-D/4-D hydrogeologic framework models at multiple scales. Clarify the linkage between human water use (engineered hydrology) and the water cycle (natural hydrology). Advance ecological flow science. Provide flood-inundation science and information. Develop rapid deployment teams for water-related emergencies. Conduct integrated watershed assessment, research, and modeling. Deliver water data and analyses to the Nation. The body of the report is presented as a hierarchal set of 5 goals, 14 objectives, and 27 strategic actions that the USGS should undertake to advance water science through year 2022. The goals deal with: Providing society the information it needs regarding the amount and quality of water in all components of the water cycle at high temporal and spatial resolution, nationwide; Advancing our understanding of processes that determine water availability; Predicting changes in the quantity and quality of water resources in response to changing climate, population, land use, and management scenarios; Anticipating and responding to water-related emergencies and conflicts; and Delivering timely hydrologic data, analyses, and decision-support tools seamlessly across the Nation to support water-resource decisions. Scientific information produced on water resources would be without value if it were not communicated to society in a fashion that can inform decisions and actions. Therefore, the chapter following the goals describes how the USGS should inform, involve, and educate society about the science it produces. This includes discussions on local outreach and the use of social media for effective communication. This report concludes with a chapter devoted to the crosscutting science issues of the Water Mission Area with the other USGS Mission Areas: Climate and Land Use Change, Core Science Systems, Ecosystems, Energy and Minerals, Environmental Health Science, and Natural Hazards. Not one of these Mission Areas stands alone—all must work together and integrate their actions to fulfill the USGS science mission for the future. This final chapter identifies the important linkages that must be realized and maintained for this integration to occur.

Open-File Report↗

USGS2020

Investigating maternity roost selection by northern long-eared bats at three sites in Wisconsin

One of the North American bat species most impacted by white-nose syndrome (WNS) is the northern long-eared bat Myotis septentrionalis , which as a result has been listed under the Endangered Species Act. WNS was first detected in Wisconsin in 2014. Unfortunately, little is known regarding the ecology of M. septentrionalis in this state pre-WNS to guide management supporting post-WNS recovery efforts. The objectives of our research were to (1) assess characteristics of trees that are associated with roost tree selection and (2) investigate how characteristics of maternity colony networks compare to colonies in the eastern USA. We mist-netted at 3 sites in Wisconsin in 2015 and 2016, and affixed radio transmitters to 39 female M. septentrionalis . We tracked bats to 53 confirmed day roosts. We found that roost trees were larger, more decayed, and more likely to be in dominant canopy closure areas than random trees. Oaks Quercus spp. were used most frequently and in proportion to their availability in the landscape at 2 field sites, whereas invasive black locust Robinia pseudoacacia was used more than expected based on availability at another site. Overall, minimum convex polygon sizes for maternity roosts were variable (5.2 to 8.9 ha) but similar to values reported for other regions. However, network centrality was low, indicating equitable use of day roosts and more frequent roost switching compared to other regions. Our findings provide information that increasing availability of potential day roosts in the landscape during the reproductive period may improve recruitment, which may in turn mitigate some of the detrimental population effects from WNS.

Wisconsin↗

USGS2020

Environmental contamination and unusual snake mortality in an urban national wildlife refuge

The National Wildlife Refuge (NWR) System protects ~150 million acres of land and water in the United States and provides habitat for >2,000 native vertebrates species. Although legally protected, wildlife populations within these refuges can be threatened by anthropogenic activities. The lack of knowledge about such threats has the potential to undermine biodiversity conservation. We investigated patterns of wildlife mortality among three NWRs in the northern U.S. Gulf Coast. Visual surveys (958 total search-hours) were conducted for live or dead amphibians and reptiles at Big Branch, Bogue Chitto, and Bayou Sauvage NWRs. An exceptionally high incidence of snake mortality (>800% above background, P < 0.001) was observed at one site (Haul Road, Bayou Sauvage NWR). Mortality affected seven species and recurred for 29 months. Intact carcasses were subject to histopathological examination and diagnostic testing. Cause of death was undetermined (n = 9) or attributed to various pathogens (n = 5). To investigate possible underlying causes of this unusual mortality, water exposure challenges and soil toxicological analyses (n = 6 and 11 sites, respectively) were conducted on samples from Bayou Sauvage NWR, given the known potential for anthropogenic contamination in the refuge. In a controlled experiment, survival of Anaxyrus fowlerii embryos exposed to water from Recovery Road (i.e., 250m from a landfill) and Haul Road was reduced 92% and 48%, respectively, compared to four reference sites in the refuge. Sediment analyses suggested at least seven distinct sources of contaminants in Bayou Sauvage NWR. Potential sources included a landfill, illegal dumping, vehicle emissions, pesticide migration, and an active hydrocarbon pipeline leak discovered 600 m from Haul Road. Synthesis and applications: Although further research is needed to determine whether the observed mortality and contamination are related, these collective findings suggest that anthropogenic factors may threaten the ecological integrity of one of the United States largest urban wildlife refuges. More broadly, our study highlights the critical need for species inventories, baseline data, and systematic monitoring in NWRs. Such information is essential to detecting and mitigating anthropogenic threats to biodiversity conservation in protected areas.

Louisiana↗

USGS2025

Two-stage models improve machine learning classifiers in wildlife research: A case study in identifying false positive detections of Ruffed Grouse

Autonomous recording units are increasingly being used to monitor wildlife on large geographic and temporal scales, paired with machine learning (ML) to automate detection of wildlife. However, false positive detections from ML classifiers can result in erroneous ecological models that can lead to misguided management and conservation actions. We used a two-stage general approach to understand and reduce false positive detections, a technique in which outputs of the primary classification model are passed to a secondary classification model to yield the probability that a detection from the primary model is a true positive detection. This approach is demonstrated on two open-source models that detect Ruffed Grouse ( Bonasa umbellus ). We analyzed over 9500 h of acoustic data collected in 2022–2023 from the Green Mountain National Forest in Vermont, USA, and found the two models detected different types of acoustic signals associated with differing life history traits. The first model yielded 4106 detections (71.5 % true positives) while the second model yielded 524 detections (17.0 % true positives). Secondary logistic regression models separated true positives and false positives with high accuracy (84.5 % and 89.8 % respectively). Our findings go beyond improving Ruffed Grouse monitoring and conservation efforts to, more broadly, illustrate how two-stage ML approaches can improve the use of model-derived detections in wildlife research.

Vermont↗

USGS2017

Understanding ecosystem services adoption by natural resource managers and research ecologists

The ecosystem services (ES) paradigm has gained much traction as a natural resource management approach due to its comprehensive nature and ability to provide quantitative tools to improve decision-making. However, it is still uncertain whether and how practitioners have adopted the ES paradigm into their work and how this aligns with resource management information needs. To address this, we surveyed natural resource managers within the Great Lakes region about their use of ES information in decision-making. We complemented our manager survey with in-depth interviews of a related population—research ecologists at the U.S. Geological Survey Great Lakes Science Center. In this study, managers and ecologists almost unanimously agreed that ES were appropriate to consider in resource management. We also found high congruence between managers and ecologists in the ES considered most relevant to their work, with provision of habitat, recreation and tourism, biological control, and primary production being the ES ranked highly by both groups. However, a disconnect arose when research ecologists deemed the information they provide regarding ES as adequate for management needs, but managers disagreed. Furthermore, managers reported that they would use economic information about ES if they had access to that information. We believe this data deficiency could represent a gap in scientific coverage by ecologists, but it may also simply reflect an underrepresentation of ecological economists who can translate ecological knowledge of ES providers into economic information that many managers desired.

Journal of Great Lakes Research↗

USGS2021

Editorial: Combining the science and practice of restoration ecology-Case studies of a grassroots binational restoration collaborative in the Madrean Archipelago Ecoregion (2014- 2019)

The Sky Island Restoration Collaborative (SIRC) is a growing partnership between government agencies, nonprofit organizations, and private landowners in southeast Arizona, the United States, and northern Sonora, Mexico. Starting in 2014 as an experiment to cultivate restoration efforts by connecting people across vocations and nations, SIRC has evolved over 5 years into a flourishing landscape-restoration initiative. The group is founded on the concept of developing a restoration economy, where ecological and socioeconomic benefits are interconnected and complimentary. The variety of ideas, people, field sites, administration, and organizations promote learning and increase project success through iterative adaptive management, transparency, and sharing. The collaborative seeks to make restoration self-sustaining and improve quality of life for citizens living along the US-Mexico border. Research and experiments are developed between scientists and practitioners to test hypotheses, qualify procedures, and quantify impacts on shared projects. Simultaneously, partners encourage and facilitate connecting more people to the landscape—via volunteerism, internships, training, and mentoring. Through this history, SIRC’s evolution is pioneering the integration of community and ecological restoration to protect biodiversity in the Madrean Archipelago Ecoregion. This editorial introduces SIRC as a unique opportunity for scientists and practitioners looking to engage in binational partnerships and segues into this special journal issue we have assembled that relates new findings in the field of restoration ecology.

Arizona, New Mexico↗

USGS2006

Use of cotton gin trash to enhance denitrification in restored forested wetlands

Lower Mississippi Valley (LMV) has lost about 80% bottomland hardwood forests, mainly to agriculture. This landscape scale alteration of the LMV resulted in the loss of nitrate (NO3) removal capacity of the valley, contributing to nitrogen (N)-enhanced eutrophication and potentially hypoxia in the northern Gulf of Mexico. Restoration of hardwood forests in the LMV is a highly recommended practice to reduce NO3 load of the Mississippi River. However, restored bottomland forests take decades to develop characteristic ecological functions including denitrifier activity. One way to enhance denitrifier activity in restored wetland forests is to amend the soils with an available carbon (C) source. This research investigated the effects of cotton gin trash (CGT) amendment on denitrification rate and N2O:N2 emission ratio from a restored bottomland forest soils and compared it to those from an adjacent unamended natural forest soils. CGT amendment increased denitrification rates in the restored forest soils to the level of the natural forest soils. N2O:N2 emission ratios from the restored and natural forest soils were highly variable and were not significantly different from each other. These findings suggest that restoration of bottomland hardwood forests in the LMV will require organic carbon amendment to achieve enhanced denitrifier activity for NO3 removal while the restored forest is developing into a mature state over time. ?? 2006 Elsevier B.V. All rights reserved.

Mississippi↗

USGS2020

Fish growth rates and lake sulphate explain variation in mercury levels in ninespine stickleback (Pungitius pungitius) on the Arctic Coastal Plain of Alaska

Mercury concentrations in freshwater food webs are governed by complex biogeochemical and ecological interactions that spatially vary and are often mediated by climate. The Arctic Coastal Plain of Alaska (ACP) is a heterogeneous, lake-rich landscape where variability in mercury accumulation is poorly understood. Earlier research indicated that the level of catchment influence on lakes varied spatially on the ACP, and affected mercury accumulation in lake sediments. This work sought to determine drivers of spatial variation in mercury accumulation in lake food webs on the ACP. Three lakes that were a priori identified as “high catchment influence” (Reindeer Camp region) and three lakes that were a priori identified as “low catchment influence” (Atqasuk region) were sampled, and variability in water chemistry, food web ecology, and mercury accumulation was investigated. Among-lake differences in ninespine stickleback ( Pungitius pungitius ) length-adjusted methylmercury concentrations were significantly explained by sulphate concentration in lake water, a tracer of catchment runoff input. This effect was mediated by fish growth, which had no pattern between regions. Together, lake water sulphate concentration and fish age-at-size (proxy for growth) accounted for nearly all of the among-lake variability in length-adjusted methylmercury concentrations in stickleback (R 2 adj = 0.94, p < 0.01). The percentage of total mercury as methylmercury (a proxy for net Hg methylation) was higher in sediments of more autochthonous, “low catchment influence” lakes ( p < 0.05), and in the periphyton of more allochthonous, “high catchment influence” lakes (p < 0.05). The results indicate that dominant sources of primary production (littoral macrophyte/biofilm vs. pelagic phytoplankton) and food web structure (detrital vs. grazing) are regulated by catchment characteristics on the ACP, and that this ultimately influences the amount of methylmercury in the aquatic food web. These results have important implications for predicting future mercury concentrations in fish in lakes where fish growth rates and catchment inputs may change in response to a changing climate.

Alaska↗

USGS1980

Ecology of a Maryland population of black rat snakes (Elaphe o. obsoleta)

Behavior, growth and age of black rat snakes under natural conditions were investigated by mark-recapture methods at the Patuxent Wildlife Research Center for 22 years (1942-1963), with limited observations for 13 more years (1964-1976). Over the 35-year period, 330 snakes were recorded a total of 704 times. Individual home ranges remained stable for many years; male ranges averaged at least 600 m in diam and female ranges at least 500 m, each including a diversity of habitats, evidenced also in records of foods. Population density was low, probably less than 0.5 snake/ha. Peak activity of both sexes was in May and June, with a secondary peak in September. Large trees in the midst of open areas appeared to serve a significant functional role in the behavioral life pattern of the snake population. Male combat was observed three times in the field. Male snakes grew more rapidly than females, attained larger sizes and lived longer. Some individuals of both sexes probably lived 20 years or more. Weight-length relationships changed as the snakes grew and developed heavier bodies in proportion to length. Growth apparently continued throughout life. Some individuals, however, both male and female, stopped growing for periods of I or 2 years and then resumed, a condition probably related to poor health, suggested by skin ailments.

Maryland↗

USGS2022

Evaluating risks associated with capture and handling of mule deer for individual-based, long-term research

Capture and handling techniques for individual-based, long-term research that tracks the life history of animals by recapturing the same individuals for several years has vastly improved study inferences and our understanding of animal ecology. Yet there are corresponding risks to study animals associated with physical trauma or capture myopathy that can occur during or following capture events. Rarely has empirical evidence existed to guide decisions associated with understanding the magnitude of capture-related risks, how to reduce these risks when possible, and implications for mortality censoring and survival estimates. We used data collected from 2,399 capture events of mule deer ( Odocoileus hemionus ) via helicopter net-gunning to compare daily survival probabilities within a 10-week period centered on a capture event and evaluated how animal age, nutritional condition (body fat), and various handling methods influenced survival before, during, and following a capture event. Direct mortality resulting from capture efforts was 1.59%. Mean daily survival was 0.9993 ± 0.0001 (SE) during the 5-week pre-capture window, was depressed the day of capture at 0.9841 ± 0.0004, and rebounded to 0.9990 ± 0.0008 during the 5-week post-capture window. Neither capture nor handling had a detectable effect on post-capture survival, including handling time ( x̄ = 13.30 ± 1.87 min), capture time of year (i.e., Dec or Mar), tooth extraction, and the number of times an animal had been recaptured (2–17 times). Although mortality rate was slightly elevated during capture (resulting from physical trauma associated with capture), age and nutritional condition did not influence the probability of mortality during a capture event. Following a capture event, nutritional condition influenced survival; however, that relationship was consistent with expected effects of nutritional condition on winter survival and independent of capture and handling. Overall survival rates 5 weeks before capture and 5 weeks after capture were not different. A specified window of time with depressed survival following capture and handling was not evident, which contradicts the implementation of a predetermined window often used by researchers and managers for censoring mortalities that occur after capture. Previous notions that censorship of all mortality data in the 2 weeks following capture is unwarranted and risks removal of meaningful data. With previous evidence guiding our protocols for capture (e.g., reduced chase time) and handling (e.g., temperature mitigation), low direct mortality and almost undetectable indirect mortality post capture reinforces the efficacy of helicopter net-gunning for capture and recapture of mule deer in long-term, individual-based studies.

Wyoming↗

USGS2018

Mean composite fire severity metrics computed with Google Earth Engine offer improved accuracy and expanded mapping potential

Landsat-based fire severity datasets are an invaluable resource for monitoring and research purposes. These gridded fire severity datasets are generally produced with pre-and post-fire imagery to estimate the degree of fire-induced ecological change. Here, we introduce methods to produce three Landsat-based fire severity metrics using the Google Earth Engine (GEE) platform: the delta normalized burn ratio (dNBR), the relativized delta normalized burn ratio (RdNBR), and the relativized burn ratio (RBR). Our methods do not rely on time-consuming a priori scene selection and instead use a mean compositing approach in which all valid pixels (e.g. cloud-free) over a pre-specified date range (pre- and post-fire) are stacked and the mean value for each pixel over each stack is used to produce the resulting fire severity datasets. This approach demonstrates that fire severity datasets can be produced with relative ease and speed compared the standard approach in which one pre-fire and post-fire scene are judiciously identified and used to produce fire severity datasets. We also validate the GEE-derived fire severity metrics using field-based fire severity plots for 18 fires in the western US. These validations are compared to Landsat-based fire severity datasets produced using only one pre- and post-fire scene, which has been the standard approach in producing such datasets since their inception. Results indicate that the GEE-derived fire severity datasets show improved validation statistics compared to parallel versions in which only one pre-fire and post-fire scene are used. We provide code and a sample geospatial fire history layer to produce dNBR, RdNBR, and RBR for the 18 fires we evaluated. Although our approach requires that a geospatial fire history layer (i.e. fire perimeters) be produced independently and prior to applying our methods, we suggest our GEE methodology can reasonably be implemented on hundreds to thousands of fires, thereby increasing opportunities for fire severity monitoring and research across the globe.

Remote Sensing↗