Search USGSSearch

SEARCH · Search USGS

Results for “Journal of Ecology”

Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 1,135 records · Page 63Linked to original sources

RAD (Resist-Accept-Direct) switch points and triggers for adaptation planning

Climate change is transforming ecosystems globally. The Resist-Accept-Direct (RAD) framework has gained traction within many natural resource management institutions to help consider the decision space in response to this transformation. Because RAD helps manage for directional change, RAD choices entail considering which RAD pathway to implement and for how long. For example, one may accept a slowly changing ecosystem, but at a certain point, decide to begin resisting or directing the change an ecosystem is experiencing. Alternatively, one may begin resisting an ecosystem transformation, but ultimately realize resistance is no longer feasible based on cost or efficacy. These choices are challenging and encompass broad domains of cultural, ecological, financial, organizational, public, regulatory, and technological considerations to determine when to switch RAD pathways. We introduce the concepts of RAD switch points and triggers to help support these decision processes. We illustrate these concepts using case studies on walleye ( Sander vitreus ) stocking decisions in Wisconsin, wildfire response in the Greater Yellowstone Ecosystem, and bull trout ( Salvelinus confluentus ) management in Oregon, USA. Synthesizing across these examples, we delineate key points for decision makers as they (iteratively) reevaluate among the RAD pathways as conditions continue to change.

Journal of Environmental Management

Ranking river basins for stream temperature research and monitoring in the contiguous United States

There is a need to prioritize research and data collection in river basins by integrating information from environmental, ecological, and socioeconomic datasets to maintain acceptable water quality for human uses and ecosystem health. Multiple anthropogenic and natural stressors are responsible for driving changes in stream temperatures that can alter ecosystems and degrade water quality. These stressors are variable spatially and temporally, which can be challenging for prioritizing monitoring and research. In this study, an evaluation of variables related to stream temperature was performed for 163 candidate basins of the contiguous United States to highlight potential focal areas. Thirty variables were combined in six components: anthropogenic forcing, natural forcing, climate change, ecological sensitivity, socioeconomic sensitivity, and data availability. The components were incorporated into three themes: vulnerability of streams to thermal change, vulnerability of ecosystems, and vulnerability of communities. By evaluating each theme separately, patterns of vulnerability and potential resiliency were identified as well as consistency in ranks within the themes. For example, results of the national scale ranking indicated the Southern California Coastal basin (within California-Nevada region) was the highest-ranking priority in vulnerability of streams to thermal change and vulnerability of ecosystems. The analysis also identified vulnerable basins with gaps in monitoring. For example, the Missouri-Oahe basin (within the Northern High Plains region) was the highest-ranking priority for vulnerable communities with limitations in data availability. The ranking approach provides insight into basins that are resilient and are ideal candidates for monitoring and research.

Journal of Hydrology

Evaluating trade-offs in bull trout reintroduction strategies using structured decision making

Structured decision making allows reintroduction decisions to be made despite uncertainty by linking reintroduction goals with alternative management actions through predictive models of ecological processes. We developed a decision model to evaluate the trade-offs between six bull trout ( Salvelinus confluentus ) reintroduction decisions with the goal of maximizing the number of adults in the recipient population without reducing the donor population to an unacceptable level. Sensitivity analyses suggested that the decision identity and outcome were most influenced by survival parameters that result in increased adult abundance in the recipient population, increased juvenile survival in the donor and recipient populations, adult fecundity rates, and sex ratio. The decision was least sensitive to survival parameters associated with the captive-reared population, the effect of naivety on released individuals, and juvenile carrying capacity of the reintroduced population. The model and sensitivity analyses can serve as the foundation for formal adaptive management and improved effectiveness, efficiency, and transparency of bull trout reintroduction decisions.

Canadian Journal of Fisheries and Aquatic Sciences

Nutritional ecology of a fossorial herbivore: protein N and energy value of winter caches made by the northern pocket gopher, Thomomys talpoides

Northern pocket gophers ( Thomomys talpoides ) are fossorial herbivores that excavate belowground plant parts for food. In subalpine areas during autumn and winter, pocket gophers hoard plant parts in caches placed in or under snow. We examined the size and composition of 17 nival caches and tested the hypotheses that (i) cached food can provide complete energy and protein N sustenance during typical periods when burrowing is precluded by soil conditions, and (ii) cached food is a random sample of items encountered by burrowing gophers during tunnel excavation. Our data indicate that caches provide substantially more energy than protein in terms of a pocket gopher's daily maintenance requirements. Nevertheless, quantities stored are sufficient to allow individuals to endure commonly encountered adverse environmental conditions without entering negative energy or protein balance. Analysis of stomach contents and a comparison of cache composition to availability of plant species suggests that gophers consume high-protein items as they are encountered, and store low-protein items in caches.

Canadian Journal of Zoology

Truth, models, model sets, AIC, and multimodel inference: a Bayesian perspective

Statistical inference begins with viewing data as realizations of stochastic processes. Mathematical models provide partial descriptions of these processes; inference is the process of using the data to obtain a more complete description of the stochastic processes. Wildlife and ecological scientists have become increasingly concerned with the conditional nature of model-based inference: what if the model is wrong? Over the last 2 decades, Akaike's Information Criterion (AIC) has been widely and increasingly used in wildlife statistics for 2 related purposes, first for model choice and second to quantify model uncertainty. We argue that for the second of these purposes, the Bayesian paradigm provides the natural framework for describing uncertainty associated with model choice and provides the most easily communicated basis for model weighting. Moreover, Bayesian arguments provide the sole justification for interpreting model weights (including AIC weights) as coherent (mathematically self consistent) model probabilities. This interpretation requires treating the model as an exact description of the data-generating mechanism. We discuss the implications of this assumption, and conclude that more emphasis is needed on model checking to provide confidence in the quality of inference.

Journal of Wildlife Management

The integration of geophysical and enhanced Moderate Resolution Imaging Spectroradiometer Normalized Difference Vegetation Index data into a rule-based, piecewise regression-tree model to estimate cheatgrass beginning of spring growth

Cheatgrass exhibits spatial and temporal phenological variability across the Great Basin as described by ecological models formed using remote sensing and other spatial data-sets. We developed a rule-based, piecewise regression-tree model trained on 99 points that used three data-sets – latitude, elevation, and start of season time based on remote sensing input data – to estimate cheatgrass beginning of spring growth (BOSG) in the northern Great Basin. The model was then applied to map the location and timing of cheatgrass spring growth for the entire area. The model was strong ( R 2 = 0.85) and predicted an average cheatgrass BOSG across the study area of 29 March–4 April. Of early cheatgrass BOSG areas, 65% occurred at elevations below 1452 m. The highest proportion of cheatgrass BOSG occurred between mid-April and late May. Predicted cheatgrass BOSG in this study matched well with previous Great Basin cheatgrass green-up studies.

Great Basin

elfgen: A new instream flow framework for rapid generation and optimization of flow-ecology relations

Effective water resource management requires practical, data‐driven determination of instream flow needs. Newly developed, high‐resolution flow models and aquatic species databases provide enormous opportunity, but the volume of data can prove challenging to manage without automated tools. The objective of this study was to develop a framework of analytical methods and best practices to reduce costs of entry into flow–ecology analysis by integrating widely available hydrologic and ecological datasets. Ecological limit functions (ELFs) describing the relation between maximum species richness and stream size characteristics (streamflow or drainage area) were developed. Species richness is expected to increase with streamflow through a watershed up to a point where it either plateaus or transitions to a decreasing trend in larger streams. Our results show that identifying the location of this "breakpoint" is critical for producing optimal ELF model fit. We found that richness breakpoints can be estimated using automated low‐supervision methods, with high‐supervision providing negligible improvement in detection accuracy. Model fit (and predictive capability) was found to be superior in smaller hydrologic units. The ELF model ("elfgen" R package available on GitHub: https://github.com/HARPgroup/elfgen ) can be used to generate ELFs using built‐in datasets for the conterminous United States, or applied anywhere else streamflow and biodiversity data inputs are available.

Virginia

Red-tailed Hawk movements and use of habitat in the Luquillo Mountains of Puerto Rico

The Red-tailed Hawk ( Buteo jamaicensis ) is a top predator of upland ecosystems in the Greater Antilles. Little information exists on the ecology of the insular forms of this widely distributed species. We studied movements and resource use of the Red-tailed Hawk from 2000 to 2002 in the montane forests of northeastern Puerto Rico. We captured 32 and used 21 radio-marked Red-tailed Hawks to delineate home range, core area shifts, and macrohabitat use in the Luquillo Mountains. Red-tailed Hawks in the Luquillo Mountains frequently perched near the top of canopy emergent trees and were characterized by wide-ranging capabilities and extensive spatial overlap. Home range size averaged 5,022.6 ± 832.1 ha (305–11,288 ha) and core areas averaged 564.8 ± 90.7 ha (150–1,230 ha). This species had large mean weekly movements (3,286.2 ± 348.5 m) and a preference for roadside habitats. Our findings suggest fragmentation of contiguous forest outside protected areas in Puerto Rico may benefit the Red-tailed Hawk.

Puerto Rico

Satellite-tagged osprey nearly sets longevity record and productivity response to initial captures

We equipped adult Ospreys ( Pandion haliaetus ) from 24 nests in Oregon/Washington with satellite-tracked battery-powered radios, known as platform transmitter terminals (PTTs), in 1996–1999. These Ospreys from the lower Columbia River (river miles 76–286), and the Willamette Valley in western Oregon were part of a larger study of Osprey fall migration, wintering ecology, and spring migration, which included additional adults from the Upper Midwest and East Coast of the United States ( Martell et al. 2001 , 2014 , Washburn et al. 2014 ). These early-generation PTTs weighed 30–35 g (Microwave Telemetry Inc., Columbia, MD U.S.A.) and utilized the ARGOS tracking system ( www.argos-system.org ). We placed PTTs on the birds' backs using Teflon ribbon (Bally Ribbon, Bally, PA U.S.A.) in a standard backpack configuration ( Kenward 2001 ). With the mass of adult male Ospreys 1400 to 1500 g ( Poole et al. 2002 ), the ratio of tag mass to body mass was 2.0 to 2.5%. Ospreys also received a standard size 8 bird band (U.S. Geological Survey) on one leg and a numbered color band on the other. For more details on trapping techniques, attachment procedures, the battery-powered units, turn-on, turn-off cycles, and tracking equipment, see Martell et al. (2001) .

Oregon, Washington

Some observations on the ecology and fish management of reservoirs in the United States

By 1980 there were 1,608 reservoirs (over 202 ha each) with a surface area of 4 million ha in the United States. Construction of new reservoirs has decreased in recent years because of the lack of suitable sites and the opposition of environmental interests. Reservoirs have characteristics of both lacustrine and riverine ecosystems. Reservoirs have been segmented into riverine, transitional and lacustrine zones for simulation modelling.Fish and plankton production increases rapidly after initial impoundment and then decreases and stabilizes at lower levels. Decreases in the number of fish species and in fish biomass following impoundment are caused by reduced quantity and quality of spawning and nursery habitat and decreased detrital input. Plankton populations can be followed downstream in a series of reservoirs and increases in abundance were associated with the inundation of vegetation or the introduction of nutrients.In addition to water level management, the most effective fish management programs have included introducing new fishes, developing vegetation or building structures on the reservoir bottom. Considerable progress has been made in predicting the effects of environmental parameters on fish production.

Montana, Nebraska, North Dakota, South Dakota

Differential propagation of the metazoan parasite Myxobolus cerebralis by Limnodrilus hoffmeisteri, Ilyodrilus templetoni, and genetically distinct strains of Tubifex tubifex

Whirling disease, caused by the parasite Myxobolus cerebralis, has infected rainbow trout (Oncorhynchus mykiss) and other salmonid fish in the western United States, often with devastating results to native populations but without a discernible spatial pattern. The parasite develops in a complex 2-host system in which the aquatic oligochaete Tubifex tubifex is an obligate host. Because substantial differences in whirling disease severity in different areas of North America did not seem explainable by environmental factors or features of the parasite or its fish host, we sought to determine whether ecological or genetic variation within oligochaete host populations may be responsible. We found large differences in compatibility between the parasite and various laboratory strains of T. tubifex that were established from geographic regions with different whirling disease histories. Moreover, 2 closely related species of tubificids, Limnodrilus hqffmeisteri and Ilyodrilus templetoni, which occur naturally in mixed species assemblages with T. tubifex, were incompatible with M. cerebralis. Virulence of the parasite was directly correlated with the numbers of triactinomyxon spores that developed within each strain of T. tubifex. Thus, the level of virulence was directly related to the compatibility between the host strain and the parasite. Genetic analyses revealed relationships that were in agreement with the level of parasite production. Differences in compatibilities between oligochaetes and M. cerebralis may contribute to the spatial variance in the severity of the disease among salmonid populations. ?? American Society of Parasitologists 2004.

Journal of Parasitology

The influence of layout on Appalachian Trail soil loss, widening, and muddiness: Implications for sustainable trail design and management

This research investigates the influence of layout and design on the severity of trail degradation. Previous trail studies have been restricted by relatively small study areas which provide a limited range of environmental conditions and therefore produce findings with limited applicability; this research improves on this limitation by analyzing a representative sample of the Appalachian Trail with significant topographical, ecological, use-related, and managerial diversity. Many trail science studies have also focused on a singular form of trail degradation, whereas this study investigates all three core types of trail impact: trail soil loss, widening and muddiness. Relational analyses with all three indicators provide a more cohesive understanding of trail impact and reveal interrelationships between trail degradation processes. ANOVA testing of the mean values for these trail impact indicators across categories of influential independent factors confirms and refines the relevance of core trail design principles, specifically the sustainability advantages of trails with low grades and side-hill alignments. Findings also reveal and clarify the importance of landform grade in determining the susceptibility of trails to degradation and the influence of routing decisions; these relationships have received relatively little attention in the literature. The results also reveal several methodological considerations for trail alignment metrics and trail impact indicators

Connecticut, Georgia, Maine, Massachusetts, Maryla

The FORE-SCE model: a practical approach for projecting land cover change using scenario-based modeling

A wide variety of ecological applications require spatially explicit, historic, current, and projected land use and land cover data. The U.S. Land Cover Trends project is analyzing contemporary (1973–2000) land-cover change in the conterminous United States. The newly developed FORE-SCE model used Land Cover Trends data and theoretical, statistical, and deterministic modeling techniques to project future land cover change through 2020 for multiple plausible scenarios. Projected proportions of future land use were initially developed, and then sited on the lands with the highest potential for supporting that land use and land cover using a statistically based stochastic allocation procedure. Three scenarios of 2020 land cover were mapped for the western Great Plains in the US. The model provided realistic, high-resolution, scenario-based land-cover products suitable for multiple applications, including studies of climate and weather variability, carbon dynamics, and regional hydrology.

Journal of Land Use Science

Energy dynamics, foraging ecology, and behavior of prenesting greater white-fronted geese

We collected greater white-fronted geese (Anser albifrons frontalis) on their nesting grounds on the Yukon-Kuskokwim Delta, Alaska, when they arrived and again before incubation during 1986 and 1987. Body mass, water content, crude fat, and crude protein increased in female geese between arrival and incubation onset in 1986 and 1987 (P = 0.0001, 0.0002, 0.0329, and 0.0003, respectively). Body mass of male geese during prenesting did not change, but total fat content decreased by about 30%. Crude protein of males was different between years (P = 0.0014). Female geese spent more time feeding than did males (P < 0.001). Primary foods during the prenesting period were pendent grass (Arctophila fulva) shoots and arrowgrass (Triglochin palustris) bulbs. Gizzard contents and orifice staining indicated crowberries (Empetrum nigrum) also were consumed. Of the commonly consumed food items, arrowgrass bulbs had the greatest protein content (21%), and crowberries had the greatest lipid content (10%). Unlike other medium-sized, northern-nesting geese, food (energy) acquired on the nesting grounds by white-fronted geese before incubation increased endogenous reserves necessary for reproduction.

Journal of Wildlife Management

Basis function models for animal movement

Advances in satellite-based data collection techniques have served as a catalyst for new statistical methodology to analyze these data. In wildlife ecological studies, satellite-based data and methodology have provided a wealth of information about animal space use and the investigation of individual-based animal–environment relationships. With the technology for data collection improving dramatically over time, we are left with massive archives of historical animal telemetry data of varying quality. While many contemporary statistical approaches for inferring movement behavior are specified in discrete time, we develop a flexible continuous-time stochastic integral equation framework that is amenable to reduced-rank second-order covariance parameterizations. We demonstrate how the associated first-order basis functions can be constructed to mimic behavioral characteristics in realistic trajectory processes using telemetry data from mule deer and mountain lion individuals in western North America. Our approach is parallelizable and provides inference for heterogenous trajectories using nonstationary spatial modeling techniques that are feasible for large telemetry datasets. Supplementary materials for this article are available online.

Journal of the American Statistical Association

Disease epidemics: Lessons for resilience in an increasingly connected world

In public health, the term resilience often refers to the personality traits that individuals possess which help them endure and recover from stressors. However, resilience as a system characteristic, especially in regards to complex social-ecological systems, can be informative for public health at scales larger than the individual. Acute shocks to systems occur against a background of existing conditions, which are crucial determinants of the eventual public health outcomes of those shocks, and in the context of complex dependencies among and between ecological and societal elements. Many components of a system's baseline condition are chronic public health concerns themselves and diminish the capacity of the system to perform in the face of acute shocks. The emerging field of resilience management is concerned with holistically assessing and improving a system's ability to prepare for and absorb disruption, and then recover and adapt across physical, information, environmental and social domains. Integrating resilience considerations into current risk- and evidence-based approaches to disease control and prevention 1 can move public health efforts toward more proactive and comprehensive solutions for protecting and improving the health of communities. Here, we look to the case of the Black Death as an illustrative case of a dramatic transformation in human history, an acute shock to a system that was underlain by chronic social maladies, to derive lessons about resilience management for public health in contemporary systems.

Journal of Public Health

Summer Diet of Juvenile Lake Sturgeon Reintroduced into the Genesee and St. Regis Rivers, New York USA

The restoration of threatened species involves understanding multiple aspects of the life history and ecology of the target species. One important consideration in the restoration of threatened species is feeding ecology. We examined the summer diet of reintroduced juvenile lake sturgeon ( Acipenser fulvescens ) in the Genesee ( n = 119, ages 1 and 2) and the St. Regis rivers ( n = 40, ages 1, 2, 5, 6, and 7) of New York State, USA, in the summer of 2005. The most common taxa consumed were Diptera (88% of prey biomass) in the Genesee River and Ephemeroptera (35% of prey biomass) and Diptera (29%) in the St. Regis River. Diptera: (Chironomidae) was the major prey taxon in both benthic communities. Selectivity analysis showed a positive selection of Diptera by Genesee River lake sturgeon and an avoidance of Diptera by St. Regis River lake sturgeon. The St. Regis River lake sturgeon showed avoidance of Coleoptera, but positive selection of Ephemeroptera, Trichoptera, and Oligochaeta. Results indicate that the reintroduced juvenile lake sturgeon are growing and successfully finding prey in these two rivers and appear to actively select specific prey types.

New York

Intrinsic prey preference and selection of the giant gartersnake: A threatened predator in a nonnative prey-dominated community

The introduction of exotic species into an environment can introduce great change in the trophic dynamics of native species. This is of even greater concern if the native species is of conservation concern. The giant gartersnake, Thamnophis gigas , an endemic predator of the Central Valley of California and a species of conservation concern at the state and federal levels, has declined as a result of conversion of its once vast wetland habitat to agriculture. Another anthropogenic factor contributing to this snake's changing ecology is the introduction of nonnative prey into the species' habitats. These introductions have resulted in a prey community that is almost completely composed of exotic species and have potential for considerable effects. In order to assess prey preference and selection we performed three sets of behavioral trials on naïve neonates. We examined 1) neonate prey preference in response to olfactory cues of prepared prey extracts, 2) neonate consumption of different live prey items presented simultaneously; and 3) terrestrial feeding behavior and/or latency to successful attack. Results from the olfactory study suggest that native Sierran treefrogs, Pseudacris sierra, are preferred by neonates. Results from consumption trials suggest that neonates are more likely to select frog species than fish species. This is the first study that we are aware of that examines prey selection of this threatened species and serves to inform its conservation and management.

Journal of Fish and Wildlife Management