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USGS2021

Waterfowl use of wetland habitats informs wetland restoration designs for multi‐species benefits

Extensive global estuarine wetland losses have prompted intensive focus on restoration of these habitats. In California, substantial tracts of freshwater, brackish and tidal wetlands have been lost. Given the anthropogenic footprint of development and urbanization in this region, wetland restoration must rely on conversion of existing habitat types rather than adding new wetlands. These restorations can cause conflicts among stakeholders and species that win or lose depending on identified restoration priorities. Suisun Marsh on the San Francisco Bay Estuary is the largest brackish marsh on the U.S. Pacific coast. To understand how conversion of brackish managed wetlands to tidal marsh would impact waterfowl populations and whether future tidal marsh restorations could provide suitable habitat for dabbling ducks, we examined waterfowl wetland use with a robust GPS‐GSM tracking dataset (442,017 locations) from six dabbling duck species (N=315). Managed wetlands, which comprise 47% of Suisun Marsh, were consistently and strongly selected by waterfowl over tidal marshes, with use ~98% across seasons and species. However, while use of tidal marsh (only 14% of Suisun Marsh) was generally <2%, almost half our ducks (~44%) spent some time in this habitat and exhibited strong utilization of pond‐like features. Ponds only comprise ~10% of this habitat but attracted 44% use (~4.5 times greater than availability). Synthesis and applications : Managed wetlands were vital to dabbling ducks, but losses from conversion of these habitats may be partially mitigated by incorporating pond features that are more attractive to waterfowl, and likely to offer multi‐species benefits, into tidal marsh restoration designs. While waterfowl are presently a common taxon, previously seen calamitous population declines can be avoided through informed ecosystem‐based management that promotes species richness, biodiversity and helps “keep common species common”.

California↗

USGS2022

Physiological and nutritional constraints on zooplankton productivity due to eutrophication and climate change predicted using a resource-based modeling approach

Emerging evidence suggests that zooplankton production is affected by physiological and nutritional constraints due to climate change and eutrophication, which in turn could have broad implications for food-web dynamics and fisheries production. In this study, we developed a resource-based zooplankton production dynamics model that causally links freshwater cladoceran and copepod daily production-to-biomass (P/B) ratios with water temperature, phytoplankton biomass and community composition, and zooplankton feeding selectivity. This model was used to evaluate constraints on zooplankton growth under four hypothetical scenarios: involving natural plankton community seasonal succession; lake fertilization to enhance fisheries production; eutrophication; and climatic warming. Our novel modeling approach predicts zooplankton production is strongly dependent on seasonal variation in resource availability and quality, which results in more complex zooplankton dynamics than predicted by simpler temperature dependent models. For mesotrophic and hypereutrophic lakes, our study suggests that the ultimate control over zooplankton P/B ratios shifts from physiological control during colder periods to strong resource control during warmer periods. Our resource-based model provided important insights into the nature of biophysical control of zooplankton under a changing climate that has crucial implications for food web energy transfer and fisheries production.

Canadian Journal of Fisheries and Aquatic Sciences↗

USGS2015

Determining climate change management priorities: A case study from Wisconsin

A burgeoning dialogue exists regarding how to allocate resources to maximize the likelihood of long-term biodiversity conservation within the context of climate change. To make effective decisions in natural resource management, an iterative, collaborative, and learning-based decision process may be more successful than a strictly consultative approach. One important, early step in a decision process is to identify priority species or systems. Although this promotes the conservation of select species or systems, it may inadvertently alter the future of non-target species and systems. We describe a process to screen terrestrial wildlife for potential sensitivity to climate change and then use the results to engage natural resource professionals in a process of identifying priorities for monitoring, research, and adaptation strategy implementation. We demonstrate this approach using a case study from Wisconsin. In Wisconsin, experts identified 23 out of 353 species with sufficient empirical research and management understanding to inform targeted action. Habitat management and management of hydrological conditions were the common strategies for targeted action. Although there may be an interest in adaptation strategy implementation for many species and systems, experts considered existing information inadequate to inform targeted action. According to experts, 40% of the vertebrate species in Wisconsin will require near-term intervention for climate adaptation. These results will inform state-wide conservation planning as well as regional efforts.

Wisconsin↗

USGS2021

Loss of branches due to winter storms could favor deciduousness in oaks

Premise Ecologists have an incomplete understanding of the factors that select for deciduous, evergreen, and marcescent leaf habits. Evergreens have more opportunities for photosynthesis but may experience costs when abiotic conditions are unfavorable such as during ice and windstorms. Methods We documented branch loss for species of oaks ( Quercus spp.) in a common garden in California during an unusual windstorm. Results Branches of marcescent trees were more likely to break during the storm, and this pattern had a negligible phylogenetic signature. Branches of evergreen and marcescent species were mostly alive before breaking, which likely accrued a fitness cost, while those of deciduous species were mostly already dead. One explanation for the overrepresentation of broken branches from marcescent species is that their petioles are inflexible and have greater wind loading compared to the flexible petioles of evergreen leaves and the leafless condition of deciduous branches. Conclusions These results suggest that branch loss during unusual winter storms may be an important cost of a marcescent leaf habit.

American Journal of Botany↗

USGS2012

Multivariate statistical approach to estimate mixing proportions for unknown end members

A multivariate statistical method is presented, which includes principal components analysis (PCA) and an end-member mixing model to estimate unknown end-member hydrochemical compositions and the relative mixing proportions of those end members in mixed waters. PCA, together with the Hotelling T 2 statistic and a conceptual model of groundwater flow and mixing, was used in selecting samples that best approximate end members, which then were used as initial values in optimization of the end-member mixing model. This method was tested on controlled datasets (i.e., true values of estimates were known a priori) and found effective in estimating these end members and mixing proportions. The controlled datasets included synthetically generated hydrochemical data, synthetically generated mixing proportions, and laboratory analyses of sample mixtures, which were used in an evaluation of the effectiveness of this method for potential use in actual hydrological settings. For three different scenarios tested, correlation coefficients ( R 2 ) for linear regression between the estimated and known values ranged from 0.968 to 0.993 for mixing proportions and from 0.839 to 0.998 for end-member compositions. The method also was applied to field data from a study of end-member mixing in groundwater as a field example and partial method validation.

Journal of Hydrology↗

USGS1981

Speciation of aryloxyethoxyethyl benzyl dimethyl ammonium salts by glass capillary gas chromatography and high-performance liquid chromatography

Using glass capillary gas chromatography (GC) and ion-pair reversed-phase high-performance liquid chromatography (HPLC), a pair of structurally similar microbicides, benzyl diisobutylphenoxyethoxyethyl dimethyl ammonium chloride and its cresoxy-analogue, were effectively resolved and accurately quantified with a high degree of selectivity and specificity. Optimization of conditions in the chromatographic systems to attain desirable baseline separations of the components of interest is described. The minimum detectable quantities as determined are in the neighborhood of 10 ng for the quaternary ammonium salts by HPLC-UV detection, 0.1 ng for the cyanamide derivatives of the salts by GC-alkaline flame-ionization detection and 1–2 pg for the trichloroethyl carbamate derivatives of the salts by GC-electron-capture detection. In conjunction with cation-exchange chromatography for sample enrichment and purification, the glass capillary GC and ion-pair reversed-phase HPLC methods presented here are particularly suitable to separate and simultaneously analyze for the aryloxyethoxyethyl benzyl dimethyl ammonium compounds concerned in environmental samples. It appears that these chromatographic techniques possess potential applicability to the separation and quantification of other classes of quaternary ammonium compounds with closely related structures that are not separable by other methods.

Journal of Chromatography↗

USGS1999

Evaluating adequacy of the representative stream reach used in invertebrate monitoring programs

Selection of a representative stream reach is implicitly or explicitly recommended in many biomonitoring protocols using benthic invertebrates. We evaluated the adequacy of sampling a single stream reach selected on the basis of its appearance. We 1st demonstrated the precision of our within-reach sampling. Then we sampled 3 or 4 reaches (each ∼20× mean width) within an 8-16 km segment on each of 8 streams in 3 ecoregions and calculated 4 common metrics: 1) total taxa; 2) Ephemeroptera, Plecoptera, and Trichoptera taxa; 3) biotic index; and 4) Shannon's diversity index. In only 6% of possible cases was the coefficient of variation for any of the metrics reduced >10% by sampling additional reaches. Sampling a 2nd reach on a stream improved the ability to detect impairment by an average of only 9.3%. Sampling a 3rd reach on a stream additionally improved ability to detect impairment by only 4.5%. We concluded that a single well-chosen reach, if adequately sampled, can be representative of an entire stream segment, and sampling additional reaches within a segment may not be cost effective.

Journal of the North American Benthological Societ↗

USGS2001

Palaeomagnetic dating of widespread remagnetization on the southeastern border of the French Massif Central and implications for fluid and Mississippi Valley-type mineralization

Palaeomagnetic dating techniques have been applied to determine the age of fluid migration that produced the Mississippi Valley-type (MVT) Pb-Zn-Ba-F deposits in the Ce??vennes region of southern France. 15 sampling sites in two gently deformed areas around the Largentie??re and Croix-de-Pallie??res mines on the Ce??vennes border were selected for palaeomagnetic study. They yielded a very well-defined direction of remagnetization corresponding to an Early-Middle Eocene age. This remagnetization cannot be related to the formation of magnetic as a result of the transformation of smectite to illite because the latter has been well dated as a Mesozoic event. The magnetic overprint in this area is related to a chemical phenomenon during fluid migration. The age of remagnetization corresponds to a major uplift in the Pyre??ne??es mountains, located to the south of the Ce??vennes. This implies that fluid migration occurred from the south to the north as a result of hydraulic head established in the Pyre??ne??es orogenic belt during orogenesis and suggests that the MVT deposits in the Ce??vennes region formed from a gravity-driven fluid system as described by Garven & Freeze (1984a,b).

Geophysical Journal International↗

USGS2008

Modeling variability and trends in pesticide concentrations in streams

A parametric regression model was developed for assessing the variability and long-term trends in pesticide concentrations in streams. The dependent variable is the logarithm of pesticide concentration and the explanatory variables are a seasonal wave, which represents the seasonal variability of concentration in response to seasonal application rates; a streamflow anomaly, which is the deviation of concurrent daily streamflow from average conditions for the previous 30 days; and a trend, which represents long-term (inter-annual) changes in concentration. Application of the model to selected herbicides and insecticides in four diverse streams indicated the model is robust with respect to pesticide type, stream location, and the degree of censoring (proportion of nondetections). An automatic model fitting and selection procedure for the seasonal wave and trend components was found to perform well for the datasets analyzed. Artificial censoring scenarios were used in a Monte Carlo simulation analysis to show that the fitted trends were unbiased and the approximate p-values were accurate for as few as 10 uncensored concentrations during a three-year period, assuming a sampling frequency of 15 samples per year. Trend estimates for the full model were compared with a model without the streamflow anomaly and a model in which the seasonality was modeled using standard trigonometric functions, rather than seasonal application rates. Exclusion of the streamflow anomaly resulted in substantial increases in the mean-squared error and decreases in power for detecting trends. Incorrectly modeling the seasonal structure of the concentration data resulted in substantial estimation bias and moderate increases in mean-squared error and decreases in power. ?? 2008 American Water Resources Association.

Journal of the American Water Resources Associatio↗

USGS2008

Modeling the effect of toe clipping on treefrog survival: Beyond the return rate

Some studies have described a negative effect of toe clipping on return rates of marked anurans, but the return rate is limited in that it does not account for heterogeneity of capture probabilities. We used open population mark-recapture models to estimate both apparent survival ( ϕ ) and the recapture probability ( p ) of two treefrog species individually marked by clipping 2–4 toes. We used information-theoretic model selection to examine the effect of toe clipping on survival while accounting for variation in capture probability. The model selection results indicate strong support for an effect of toe clipping on survival of Green Treefrogs ( Hyla cinerea ) and only limited support for an effect of toe clipping on capture probability. We estimate there was a mean absolute decrease in survival of 5.02% and 11.16% for Green Treefrogs with three and four toes removed, respectively, compared to individuals with just two toes removed. Results for Squirrel Treefrogs ( Hyla squirella ) indicate little support for an effect of toe clipping on survival but may indicate some support for a negative effect on capture probability. We believe that the return rate alone should not be used to examine survival of marked animals because constant capture probability must be assumed, and our examples demonstrate how capture probability may vary over time and among groups. Mark-recapture models provide a method for estimating the effect of toe clipping on anuran survival in situations where unique marks are applied.

Journal of Herpetology↗

USGS2001

Toward a national fuels mapping strategy: Lessons from selected mapping programs

The establishment of a robust national fuels mapping program must be based on pertinent lessons from relevant national mapping programs. Many large-area mapping programs are under way in numerous Federal agencies. Each of these programs follows unique strategies to achieve mapping goals and objectives. Implementation approaches range from highly centralized programs that use tightly integrated standards and dedicated staff, to dispersed programs that permit considerable flexibility. One model facilitates national consistency, while the other allows accommodation of locally relevant conditions and issues. An examination of the programmatic strategies of four national vegetation and land cover mapping initiatives can identify the unique approaches, accomplishments, and lessons of each that should be considered in the design of a national fuel mapping program. The first three programs are the U.S. Geological Survey Gap Analysis Program, the U.S. Geological Survey National Land Cover Characterization Program, and the U.S. Fish and Wildlife Survey National Wetlands Inventory. A fourth program, the interagency Multiresolution Land Characterization Program, offers insights in the use of partnerships to accomplish mapping goals. Collectively, the programs provide lessons, guiding principles, and other basic concepts that can be used to design a successful national fuels mapping initiative.

International Journal of Wildland Fire↗

USGS2011

Fire, grazing history, lichen abundance, and winter distribution of caribou in Alaska's taiga

In the early 1990s the Nelchina Caribou ( Rangifer tarandus ) Herd (NCH) began a dramatic shift to its current winter range, migrating at least an additional 100 km beyond its historic range. We evaluated the impacts of fire and grazing history on lichen abundance and subsequent use and distribution by the NCH. Historic (prior to 1990) and current (2002) winter ranges of the NCH had similar vascular vegetation, lichen cover ( P = 0.491), and fire histories ( P = 0.535), but the former range had significantly less forage lichen biomass as a result of grazing by caribou. Biomass of forage lichens was twice as great overall ( P = 0.031) and 4 times greater in caribou selected sites on the current range than in the historic range, greatly increasing availability to caribou. Caribou on the current range selected for stands with >20% lichen cover ( P < 0.001), greater than 1,250 kg/ha ( P < 0.001) forage lichen biomass and stands older than 80 yr postfire ( P < 0.001). After fires, forage lichen cover and biomass seldom recovered sufficiently to attract caribou grazing until after ≥60 yr, and, as a group, primary forage lichen species did not reach maximum abundance until 180 yr postfire. Recovery following overgrazing can occur much more quickly because lichen cover, albeit mostly fragments, and organic substrates remain present. Our results provide benchmarks for wildlife managers assessing condition of caribou winter range and predicting effects of fires on lichen abundance and caribou distribution. Of our measurements of cover and biomass by species, densities and heights of trees, elevation, slope and aspect, only percentage cover by Cladonia amaurocraea , Cladina rangiferina , Flavocetraria cuculata , and lowbush cranberry ( Vaccinium vitis‐idaea ) were necessary for predicting caribou use of winter range.

Journal of Wildlife Management↗

USGS1990

Selenium speciation methods and application to soil saturation extracts from San Joaquin Valley, California

Methods to determine soluble concentrations of selenite, selenate, and organic Se were evaluated on saturation extracts of soil samples collected from three sites on the Panoche Creek alluvial fan in the western San Joaquin Valley, California. The methods were used in combination with hydride-generation atomic-absorption spectrometry for detection of Se, and included a selective chemical-digestion method and three chromatographic methods using XAD-8 resin, Sep-Pak C 18 cartridge, and a combination of XAD-8 resin and activated charcoal. The chromatography methods isolate dissolved organic matter that can inhibit Se detection by hydride-generation atomic-absorption spectrometry. Isolation of hydrophobic organic matter with XAD-8 did not affect concentrations of selenite and selenate, and the isolated organic matter represents a minimal estimation of organic Se. Ninety-eight percent of the Se in the extracts was selenate and about 100% of the isolated organic Se was associated with the humic acid fraction of dissolved organic matter. The depth distribution of Se species in the soil saturation extracts support a hypothesis that the distribution of soluble Se and salinity in these soils is the result of evaporation from a shallow water table and leaching by irrigation water low in Se and salinity.

California↗

USGS2004

Simulating the dynamics of linear forests in Great Plains agroecosystems under changing climates

Most forest growth models are not suitable for the highly fragmented, linear (or linearly shaped) forests in the Great Plains agroecosystems (e.g., windbreaks, riparian forest buffers) where such forests are a minor but ecologically important component of the land mosaics. This study used SEEDSCAPE, a recently modified gap model designed for cultivated land mosaics in the Great Plains, to simulate the effects of climate change on the dynamics of such linear forests. We simulated the dynamics of windbreaks with different initial planting species richness and widths (light changes as the selected resulting factor) using current climate data and nested regional circulation models (RegCMs). Results indicated that (1) it took 70-80 simulation years for the linear forests to reach a steady state under both normal (present-day) and warming climates; (2) warming climates would reduce total aboveground tree biomass and the spatial variation in biomass but increase dominance in the linear forests, especially in the upland forests; (3) linear forests with higher planting species richness and smaller width produced higher aboveground tree biomass per unit area; and (4) same species performed very differently with different climate scenarios, initial planting diversity, and forest widths. Although the model still needs further improvements (e.g., the effects of understory species should be included), the model can serve as a useful tool in modeling the succession of linear forests in human-dominated land mosaics under changing climates and may also have significant practical implications in other systems.

Canadian Journal of Forest Research↗

USGS2021

Movements of selected minnows between the lower Yellowstone River and its tributaries

Reduced population connectivity has been implicated as a cause of decreased distributions and abundances of many Great Plains fishes. However, scant empirical evidence quantifying movement and relating the contribution of spatial linkages to population abundances and resilience exists. We used otolith microchemistry analysis to characterize the movements of western silvery minnows ( Hybognathus argyritis Girard, 1856), flathead chubs ( Platygobio gracilis (Richardson, 1836)), and sand shiners ( Notropis stramineus (Cope, 1865)) between the Yellowstone River and its tributaries. Sixty-nine percent of western silvery minnows, 65% of flathead chubs, and 42% of sand shiners moved between the Yellowstone River and tributaries. Mean total number of interchanges was highest among western silvery minnows (4.8 interchanges/mover), intermediate among flathead chubs (4.3 interchanges/mover), and lowest among sand shiners (1.4 interchanges/mover; P < 0.01). Natal movements were rare, but juvenile movements were common and frequent among all three species. Movements between main-stem and tributary habitats are probably prominent facets of the life cycles of other Great Plains minnows. Therefore, connectivity among such habitats should be a high conservation priority to enhance the long-term viability of such fishes.

Great Plains, Yellowstone River↗

USGS1988

A survey of the prevalence of selected bacteria in wild birds

We determined the prevalence of six genera of bacteria from a sample of 387 cloacal swabs from 364 passerines and woodpeckers. The prevalence of bacteria were as follows: Escherichia coli (1%), Pseudomonas spp. (22%), Salmonella spp. (0%), Staphylococcus spp. (15%), Streptococcus spp. (18%), and Yersinia spp. (1%). The prevalence of Streptococcus spp. was higher in omnivorous species than in granivorous species (20% versus 8%). Individuals captured at feeders had a lower prevalence of both Streptococcus spp. (15% versus 33%) and Escherichia coli (0.5% versus 4%) than birds that did not have access to feeders. These differences are probably not due to the feeder per se, but instead to other site related differences. The prevalence of bacteria did not differ between male and female black-capped chickadees, Parus atricapillus . For 279 color marked black-capped chickadees, we calculated the cumulative mortality rate during 12 wk following swabbing. Although the cumulative mortality rates of infected birds were consistently higher than the rates of non-infected birds, none of these differences were significant. Infections may cause slight reductions in survival rates, but we were not able to confirm this with our data.

Wisconsin↗

USGS2008

Habitat use and movement patterns by adult saugers from fall to summer in an unimpounded small-river system

The Little Wind River drainage in Wyoming is a relatively small unimpounded river system inhabited by native saugers Sander canadensis. Radio telemetry was used to assess habitat use and movement patterns by adult saugers in the river system from fall through early summer. Fifty-four adult saugers were captured during fall 2004, surgically implanted with radio transmitters, and tracked through mid-July 2005. Tagged saugers selected large and deep pools. Such pools were abundant throughout the Little Wind River system and led to saugers being widely dispersed from fall to early spring. During fall, winter, and early spring, tagged saugers remained sedentary and moved short distances among pools in close proximity to each other. Longer movements by tagged saugers occurred from mid-spring to early summer, and were associated with both upstream and downstream movements to and from two river segments believed to be used for spawning. During early summer, most saugers returned to locations where they had been tagged the previous fall and had spent the winter. Our results provide evidence that preservation of the sauger fishery in the Wind River system will depend on maintaining fish passage throughout the portion of the watershed inhabited by saugers and preserving natural fluvial processes that maintain large and deep pools. ?? Copyright by the American Fisheries Society 2008.

North American Journal of Fisheries Management↗

USGS2002

Bryophytes from Tuxedni Wilderness area, Alaska

The bryoflora of two small maritime islands, Chisik and Duck Island (2,302 ha), comprising Tuxedni Wilderness in western lower Cook Inlet, Alaska, was examined to determine species composition in an area where no previous collections had been reported. The field study was conducted from sites selected to represent the totality of environmental variation within Tuxedni Wilderness. Data were analyzed using published reports to compare the bryophyte distribution patterns at three levels, the Northern Hemisphere, North America, and Alaska. A total of 286 bryophytes were identified: 230 mosses and 56 liverworts. Bryum miniatum, Dichodontium olympicum, and Orthotrichum pollens are new to Alaska. The annotated list of species for Tuxedni Wilderness expands the known range for many species and fills distribution gaps within Hulte??n's Central Pacific Coast district. Compared with bryophyte distribution in the Northern Hemisphere, the bryoflora of Tuxedni Wilderness primarily includes taxa of boreal (61%), montane (13%), temperate (11%), arctic-alpine (7%), cosmopolitan (7%), distribution; 4% of the total moss flora are North America endemics. A brief summary of the botanical exploration of the general area is provided, as is a description of the bryophytes present in the vegetation and habitat types of Chisik and Duck Islands.

Alaska↗