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USGS1997

Sensitivity of greenhouse summer dryness to changes in plant rooting characteristics

A possible consequence of increased concentrations of greenhouse gases in Earth's atmosphere is “summer dryness,” a decrease of summer plant-available soil water in middle latitudes, caused by increased availability of energy to drive evapotranspiration. Results from a numerical climate model indicate that summer dryness and related changes of land-surface water balances are highly sensitive to possible concomitant changes of plant-available water-holding capacity of soil, which depends on plant rooting depth and density. The model suggests that a 14% decrease of the soil volume whose water is accessible to plant roots would generate the same summer dryness, by one measure, as an equilibrium doubling of atmospheric carbon dioxide. Conversely, a 14% increase of that soil volume would be sufficient to offset the summer dryness associated with carbon-dioxide doubling. Global and regional changes in rooting depth and density may result from (1) plant and plant-community responses to greenhouse warming, to carbon-dioxide fertilization, and to associated changes in the water balance and (2) anthropogenic deforestation and desertification. Given their apparently critical role, heretofore ignored, in global hydroclimatic change, such changes of rooting characteristics should be carefully evaluated using ecosystem observations, theory, and models.

Geophysical Research Letters↗

USGS2012

Streamflow depletion by wells--Understanding and managing the effects of groundwater pumping on streamflow

Groundwater is an important source of water for many human needs, including public supply, agriculture, and industry. With the development of any natural resource, however, adverse consequences may be associated with its use. One of the primary concerns related to the development of groundwater resources is the effect of groundwater pumping on streamflow. Groundwater and surface-water systems are connected, and groundwater discharge is often a substantial component of the total flow of a stream. Groundwater pumping reduces the amount of groundwater that flows to streams and, in some cases, can draw streamflow into the underlying groundwater system. Streamflow reductions (or depletions) caused by pumping have become an important water-resource management issue because of the negative impacts that reduced flows can have on aquatic ecosystems, the availability of surface water, and the quality and aesthetic value of streams and rivers. Scientific research over the past seven decades has made important contributions to the basic understanding of the processes and factors that affect streamflow depletion by wells. Moreover, advances in methods for simulating groundwater systems with computer models provide powerful tools for estimating the rates, locations, and timing of streamflow depletion in response to groundwater pumping and for evaluating alternative approaches for managing streamflow depletion. The primary objective of this report is to summarize these scientific insights and to describe the various field methods and modeling approaches that can be used to understand and manage streamflow depletion. A secondary objective is to highlight several misconceptions concerning streamflow depletion and to explain why these misconceptions are incorrect.

Circular↗

USGS2014

Mercury in fishes from 21 national parks in the Western United States: inter- and intra-park variation in concentrations and ecological risk

Mercury (Hg) is a global contaminant and human activities have increased atmospheric Hg concentrations 3- to 5-fold during the past 150 years. This increased release into the atmosphere has resulted in elevated loadings to aquatic habitats where biogeochemical processes promote the microbial conversion of inorganic Hg to methylmercury, the bioavailable form of Hg. The physicochemical properties of Hg and its complex environmental cycle have resulted in some of the most remote and protected areas of the world becoming contaminated with Hg concentrations that threaten ecosystem and human health. The national park network in the United States is comprised of some of the most pristine and sensitive wilderness in North America. There is concern that via global distribution, Hg contamination could threaten the ecological integrity of aquatic communities in the parks and the wildlife that depends on them. In this study, we examined Hg concentrations in non-migratory freshwater fish in 86 sites across 21 national parks in the Western United States. We report Hg concentrations of more than 1,400 fish collected in waters extending over a 4,000 kilometer distance, from Alaska to the arid Southwest. Across all parks, sites, and species, fish total Hg (THg) concentrations ranged from 9.9 to 1,109 nanograms per gram wet weight (ng/g ww) with a mean of 77.7 ng/g ww. We found substantial variation in fish THg concentrations among and within parks, suggesting that patterns of Hg risk are driven by processes occurring at a combination of scales. Additionally, variation (up to 20-fold) in site-specific fish THg concentrations within individual parks suggests that more intensive sampling in some parks will be required to effectively characterize Hg contamination in western national parks. Across all fish sampled, only 5 percent had THg concentrations exceeding a benchmark (200 ng/g ww) associated with toxic responses within the fish themselves. However, Hg concentrations in 35 percent of fish sampled were above a benchmark for risk to highly sensitive avian consumers (90 ng/g ww), and THg concentrations in 68 percent of fish sampled were above exposure levels recommended by the Great Lakes Advisory Group (50 ng/g ww) for unlimited consumption by humans. Of the fish assessed for risk to human consumers (that is, species that are large enough to be consumed by recreational or subsistence anglers), only one individual fish from Yosemite National Park had a muscle Hg concentration exceeding the benchmark (950 ng/g ww) at which no human consumption is advised. Zion, Capital Reef, Wrangell-St. Elias, and Lake Clark National Parks all contained sites in which most fish exceeded benchmarks for the protection of human and wildlife health. This finding is particularly concerning in Zion and Capitol Reef National Parks because the fish from these parks were speckled dace, a small, invertebrate-feeding species, yet their Hg concentrations were as high or higher than those in the largest, long-lived predatory species, such as lake trout. Future targeted research and monitoring across park habitats would help identify patterns of Hg distribution across the landscape and facilitate management decisions aimed at reducing the ecological risk posed by Hg contamination in sensitive ecosystems protected by the National Park Service.

Alaska;Arizona;California;Colorado;Idaho;Montana;N↗

USGS2015

How big of an effect do small dams have? Using geomorphological footprints to quantify spatial impact of low-head dams and identify patterns of across-dam variation

Longitudinal connectivity is a fundamental characteristic of rivers that can be disrupted by natural and anthropogenic processes. Dams are significant disruptions to streams. Over 2,000,000 low-head dams (<7.6 m high) fragment United States rivers. Despite potential adverse impacts of these ubiquitous disturbances, the spatial impacts of low-head dams on geomorphology and ecology are largely untested. Progress for research and conservation is impaired by not knowing the magnitude of low-head dam impacts. Based on the geomorphic literature, we refined a methodology that allowed us to quantify the spatial extent of low-head dam impacts (herein dam footprint), assessed variation in dam footprints across low-head dams within a river network, and identified select aspects of the context of this variation. Wetted width, depth, and substrate size distributions upstream and downstream of six low-head dams within the Upper Neosho River, Kansas, United States of America were measured. Total dam footprints averaged 7.9 km (3.0–15.3 km) or 287 wetted widths (136–437 wetted widths). Estimates included both upstream (mean: 6.7 km or 243 wetted widths) and downstream footprints (mean: 1.2 km or 44 wetted widths). Altogether the six low-head dams impacted 47.3 km (about 17%) of the mainstem in the river network. Despite differences in age, size, location, and primary function, the sizes of geomorphic footprints of individual low-head dams in the Upper Neosho river network were relatively similar. The number of upstream dams and distance to upstream dams, but not dam height, affected the spatial extent of dam footprints. In summary, ubiquitous low-head dams individually and cumulatively altered lotic ecosystems. Both characteristics of individual dams and the context of neighboring dams affected low-head dam impacts within the river network. For these reasons, low-head dams require a different, more integrative, approach for research and management than the individualistic approach that has been applied to larger dams.

PLoS ONE↗

USGS2005

Estimated water use and availability in the South Coastal Drainage Basin, southern Rhode Island, 1995-99

The South Coastal Drainage Basin includes approximately 59.14 square miles in southern Rhode Island. The basin was divided into three subbasins to assess the water use and availability: the Saugatucket, Point Judith Pond, and the Southwestern Coastal Drainage subbasins. Because there is limited information on the ground-water system in this basin, the water use and availability evaluations for these subbasins were derived from delineated surface-water drainage areas. An assessment was completed to estimate water withdrawals, use, and return flow over a 5-year study period from 1995 through 1999 in the basin. During the study period, one major water supplier in the basin withdrew an average of 0.389 million gallons per day from the sand and gravel deposits. Most of the potable water is imported (about 2.152 million gallons per day) from the adjacent Pawcatuck Basin to the northwest. The estimated water withdrawals from the minor water suppliers, which are all in Charlestown, during the study period were 0.064 million gallons per day. The self-supplied domestic, industrial, commercial, and agricultural withdrawals from the basin were 0.574 million gallons per day. Water use in the basin was 2.874 million gallons per day. The average return flow in the basin was 1.190 million gallons per day, which was entirely from self-disposed water users. In this basin, wastewater from service collection areas was exported (about 1.139 million gallons per day) to the Narragansett Bay Drainage Basin for treatment and discharge. During times of little to no recharge, in the form of precipitation, the surface- and ground-water system flows are from storage primarily in the stratified sand and gravel deposits, although there is flow moving through the till deposits at a slower rate. The ground water discharging to the streams, during times of little to no precipitation, is referred to as base flow. The PART program, a computerized hydrograph-separation application, was used at the selected index stream-gaging station to determine water availability based on the 75th, 50th, and 25th percentiles of the total base flow, the base flow minus the 7-day, 10-year flow criteria, and the base flow minus the Aquatic Base Flow criteria at the index station. The base flow calculated at the selected index station was subdivided into two rates on the basis of the percent contributions from sandand-gravel and till deposits. There has been no long-term collection of surface-water data in this study area and therefore an index stream-gaging station in the Pawcatuck Basin was used for the South Coastal Drainage Basin. The Pawcatuck River at Wood River Junction was chosen as the index station for the South Coastal Drainage Basin because the station is representative of the basin on the basis of the percentage of sand and gravel deposits and the average extent of thickness of the sand and gravel deposits. The baseflow contributions from sand and gravel deposits at the index station were computed for June, July, August, and September, and applied to the percentage of surficial deposits at the index station. The base-flow contributions were converted to a per unit area at the station for the till, and for the sand and gravel deposits and applied to the South Coastal Drainage Basin to determine the water availability. The results from the index station, the Pawcatuck River at Wood River Junction streamgaging station, were lowest for the summer in September. To determine water availability in the South Coastal Drainage Basin, the per unit area of the estimated base flows from sand and gravel deposits and till deposits at the index station was applied to the subbasin areas, and the resultant flows were lowest in September. The base flow at the 75th percentile in the basin was 56.95 million gallons per day in June; 32.78 million gallons per day in July; 30.22 million gallons per day in August; and 23.94 million gallons per day in September. The base flow at the 50th percentile in the basin was 44.59 million gallons per day in June; 25.31 million gallons per day in July; 20.75 million gallons per day in August; and 17.01 million gallons per day in September. The base flow at the 25th percentile in the basin was 35.52 million gallons per day in June; 20.40 million gallons per day in July; 14.94 million gallons per day in August; and 12.00 million gallons per day in September. There are some limitations in the application of this method along the coast, because saltwater intrusion can change the amount of fresh ground-water discharge to the coastal saltwater ecosystem. A ground-water system analysis evaluating these variances would provide additional information to assess the water availability along the coast. Because water withdrawals and use are greater during the summer than other times of the year, water availability in June, July, August, and September was assessed and compared to water withdrawals in the basin. The ratios were calculated by dividing the water withdrawals by the water-availability flow scenarios at the 75th, 50th, and 25th percentiles for the basin, which are based on total water available from base-flow contributions from till and sand and gravel deposits in the basin. The closer the ratio is to one, the closer the withdrawals are to the estimated water available, and the net water available decreases. For the study period, the withdrawals in July were higher than the other summer months. The ratios in the basin for the base-flow scenario, with no low-flow criteria removed, ranged from 0.029 to 0.046 in June; 0.059 to 0.094 in July; 0.050 to 0.100 in August; and 0.040 to 0.079 in September. A long-term hydrologic budget (60 years) was calculated for the South Coastal Drainage Basin to identify and assess the basin and subbasin inflow and outflows. This coastal basin is different than other study areas because all three of the subbasins drain into salt water, Point Judith Point, Long Island Sound, and Rhode Island Sound towards the Atlantic Ocean, or internally within the subbasin to the salt ponds. The hydrologic budgets, therefore, were compiled by subbasin. The basin hydrologic budget is the sum of the three subbasin budgets. Unlike a river subbasin drainage system, however, the estimated streamflows out of the subbasins were also considered outflows from the basin. The water withdrawals and return flows used in the budget were from 1995 through 1999. For the hydrologic budget, it was assumed that inflow equals outflow, where the estimated inflows were from precipitation and wastewater-return flow, and the estimated outflows were from evapotranspiration, streamflow, and water withdrawals.

Rhode Island↗

USGS2016

Effects of pulse and press drying disturbance on benthic stream communities

Natural disturbance is an integral component of most ecosystems and occurs in 3 different forms: pulse, press, and ramp. In lotic ecosystems, seasonal drought is a major form of disturbance, particularly in intermittent headwater streams, which often are reduced to pools that serve as refuges for biota. We used simulated intermittent stream pools to compare the effects of control, pulse, and press drying on growth and survival in 3 fish species ( Lepomis megalotis , Campostoma anomalum , and Etheostoma spectabile ) commonly found together in drought-prone streams in the Ozark Highlands, USA. We also compared effects on benthic community structure, including periphyton and chironomid density and sediment in deep (permanently watered) and shallow (intermittently dewatered) habitat. Only one species, L. megalotis , showed a significant reduction in length and mass growth in press drying compared with control treatments. Drying and type of drying had no effect on survival of any fish species. Drying and type of drying had strong overall effects on periphyton growth in shallow habitats, where ash-free dry mass decreased and the autotrophic index (the ratio of chlorophyll a to total biomass) increased significantly in drying relative to control and in press relative to pulse treatments. Drying negatively affected sediment accumulation in shallow habitat and chironomid density in deep habitat. Drying in intermittent streams has species-dependent effects on fish growth and benthic structure, and pulse and press drying differ in their effects on periphyton in these systems. These effects may have important consequences in seasonally drying streams as anthropogenic influence on stream drying increases.

Freshwater Science↗

USGS2015

Brumation of introduced Black and White Tegus, Tupinambis merianae (Squamata: Teiidae), in southern Florida

An established population of Tupinambis merianae (Black and White Tegu) in southeastern Florida threatens the Everglades ecosystem. Understanding the behavioral ecology of Black and White Tegus could aid in management and control plans. Black and White Tegus are seasonally active and brumate during the winter in their native range, but brumation behavior is largely unstudied in either the native or the invasive range. We describe the first observations of Black and White Tegu brumation in southeastern Florida after monitoring 5 free-ranging, adult male Black and White Tegus through an inactive season using radiotelemetry and automated cameras. Duration of brumation averaged 137 days, beginning in September and ending by February. One of the 5 Black and White Tegus emerged to bask regularly during brumation, which to our knowledge represents the first documented instance of a free-ranging Black and White Tegu basking during brumation. These preliminary findings provide a basis for future research of brumation behavior.

Florida↗

USGS1997

Reclamation of Bay wetlands and disposal of dredge spoils: meeting two goals simultaneously

San Francisco Bay is one of the world's largest urbanized estuarine systems with a watershed that drains about 40 percent of the State of California. Its freshwater and saltwater marshes comprise approximately 125 square kilometers (48 square miles), compared to 2,200 square kilometers (850 square miles) before California began rapid development in 1850. This staggering reduction in tidal wetlands of approximately 95 percent has resulted in significant loss . of habitat for many species of fish and wildlife. The need for wetlands is well documented- healthy and adequate wetlands are critical to the proper functioning of an estuarine ecosystem like San Francisco Bay.

California↗

USGS2004

Comparison of methods for determining streamflow requirements for aquatic habitat protection at selected sites on the Assabet and Charles Rivers, Eastern Massachusetts, 2000-02

Four methods used to determine streamflow requirements for habitat protection at nine critical riffle reaches in the Assabet River and Charles River Basins were compared. The methods include three standard setting techniques?R2Cross, Wetted Perimeter, and Tennant?and a diagnostic method, the Range of Variability Approach. One study reach is on the main stem of the Assabet River, four reaches are on tributaries to the Assabet River (Cold Harbor Brook, Danforth Brook, Fort Meadow Brook, and Elizabeth Brook), three are on the main stem of the Charles River, and one is on a tributary to the Charles River (Mine Brook). The strength of the R2Cross and Wetted-Perimeter methods is that they may be applied at ungaged locations whereas the Tennant method and the Range of Variability Approach require a period of streamflow record for analysis. Fish community assessments conducted at or near riffle sites in flowing reaches of the Assabet River and Charles River Basins were used to indicate ecological conditions. The fish communities in the main stem and tributary reaches of both the Assabet and Charles River Basins indicated degraded aquatic ecosystems. However, the degree of degradation differs between the two basins. The extreme predominance of tolerant, generalist species in the Charles River fish community demon-strates the cumulative impacts of flow, habitat, and water-chemistry degradation, combined with the effects of nearby impoundments and changing land use. The range of discharges for nine ungaged riffle reaches defined by the median R2Cross 3-of-3 criteria, R2Cross 2-of-3 criteria, and Wetted-Perimeter streamflow requirements, was 0.86 cubic foot per second per square mile, 0.18 cubic foot per second per square mile, and 0.23 cubic foot per second per square mile, respectively. Application of R2Cross and Wetted-Perimeter methods to sites with altered streamflows or at sites that are riffles only at low to moderate flows can result in a greater variability of streamflow requirements than would result if the methods were applied to riffles on natural channels with unaltered streamflows. The R2Cross 2-of-3 criteria and the Wetted-Perimeter streamflow requirements for the Assabet and Charles River sites show narrower interquartile ranges and lower median streamflow requirements than for 10 index streamflow-gaging stations in southern New England. This is especially evident for the R2Cross 2-of-3 criteria and Wetted-Perimeter results that were close to half of the flow requirements determined at the 10 southern New England stations. The R2Cross and Wetted-Perimeter methods were also compared to the Range of Variability Approach analysis and the Tennant Method. The median R2Cross 3-of-3 criteria streamflow requirement for the nine riffles is close to the 75th percentile of the monthly mean flows during the summer low-flow period from six streamflow-gaging stations near the Assabet and Charles River Basins having mostly unaltered flow. This streamflow requirement is close to the median Tennant 40-percent-flow requirement for good habitat condi-tion for the same six nearby stations. The R2Cross 2-of-3 criteria and Wetted-Perimeter results were less than the 25th-percentile of monthly mean flows during the summer months for the six stations. These streamflow requirements are in the poor habitat range as indicated by a Tennant analysis of the same six stations. These comparisons indicate that the R2Cross and Wetted-Perimeter methods underestimate streamflow requirements when applied to sites in smaller drainage areas and channels that are runs at higher flows.

Scientific Investigations Report↗

USGS2024

A review of the ecology and conservation biology of Sali (Micronesian Starling, Aplonis opaca guami) on Guam

The accidental introduction of the Brown Treesnake (BTS, Boiga irregularis ) to Guam following World War II led to the extinction, extirpation, or severe decline of most of Guam’s native avifauna. One forest bird species that managed to persist is the cavity-nesting Såli (Micronesian Starling, Aplonis opaca guami ), a once-ubiquitous native omnivore whose current Guam distribution is restricted primarily to urbanized areas in the northern half of the island, with a second much smaller population on Cocos Island off southern Guam. Såli on Guam breed year-round and are habitat generalists with large home ranges. Besides arthropods and small vertebrates, they consume fruit from a wide range of native and introduced plant species and are key seed dispersers within the local ecosystem. Såli on Guam suffer extremely high post-fledging mortality due to predation by BTS and cats, leading to a population age structure strongly skewed towards adult birds. Other threats include habitat loss and degradation, extreme weather events, and sea level rise. Key management activities aimed at restoring this species include predator control, while non-native ungulate removal and vegetation management may be undertaken to support broader ecological recovery. This species account on Såli provides a review of the literature on this species, synthesizing information on habitat use, life history, and demographics to provide a biological foundation for future recovery efforts.

Micronesica↗

USGS2013

Effects of climate change and urban development on the distribution and conservation of vegetation in a Mediterranean type ecosystem

Climate and land-use changes are projected to threaten biodiversity over this century. However, few studies have considered the spatial and temporal overlap of these threats to evaluate how ongoing land-use change could affect species ranges projected to shift outside conservation areas. We evaluated climate change and urban development effects on vegetation distribution in the Southwest ecoregion, California Floristic Province, USA. We also evaluated how well a conservation network protects suitable habitat for rare plant species under these change projections and identified primary sources of uncertainty. We used consensus-based maps from three species distribution models (SDMs) to project current and future suitable habitat for 19 species representing different functional types (defined by fire-response – obligate seeders, resprouting shrubs – and life forms – herbs, subshrubs), and range sizes (large/common, small/rare). We used one spatially explicit urban growth projection; two climate models, emission scenarios, and probability thresholds applied to SDMs; and high-resolution (90 m) environmental data. We projected that suitable habitat could disappear for 4 species and decrease for 15 by 2080. Averaged centroids of suitable habitat (all species) were projected to shift tens (up to hundreds) of kilometers. Herbs showed a small-projected response to climate change, while obligate seeders could suffer the greatest losses. Several rare species could lose suitable habitat inside conservation areas while increasing area outside. We concluded that (i) climate change is more important than urban development for vegetation habitat loss in this ecoregion through 2080 due to diminishing amounts of undeveloped private land in this region; (ii) the existing conservation plan, while extensive, may be inadequate to protect plant diversity under projected patterns of climate change and urban development, (iii) regional assessments of the dynamics of the drivers of biodiversity change based on high-resolution environmental data and consensus predictive mapping, such as this study, are necessary to identify the species expected to be the most vulnerable and to meaningfully inform regional-scale conservation.

California↗

USGS2025

Modeling current and future distribution of invasive tegu lizards along geopolitical boundaries in the contiguous United States: Implications for invasion threat

Historically, constrained temperature ranges limited the spread of invasive herpetofauna into temperate climates, but climate change is predicted to facilitate broader distributions. There are three species of tegu lizards native to South America and available in the pet trade that have a high risk of invasion and deleterious impacts to native ecosystems in the United States (US). There are four populations of the black and white tegu ( Salvator merianae ) in Florida and sightings as far north as North Carolina and west as California. Red tegus ( S. rufescens ) have been observed in Florida, and there is an established population of gold tegus ( Tupinambis teguixin ) in Florida. We updated previous distribution models for the contiguous United States (CONUS) that used occurrence points from their native range in South America to evaluate potential changes given current and future climate scenarios (+2 °C and +4 °C warming). Under current climate conditions, one or more tegu species have the potential to occupy most ecoregions in the CONUS. Under a + 4 °C warming scenario, suitable habitat increases by 11 % for S. merianae , 31 % for S. rufescens . The proportion of suitable habitat for T. teguixin was small under all scenarios, but increased from 0.0003 to 0.0017. For S. merianae , parts of Florida become less suitable, while suitability increases in this region for the other two species. Additionally, much of the western US is projected to be suitable for S. rufescens . Our case study underscores the potential for climate change to compound invasion threats that could outpace effective managerial responses.

contiguous United States↗

USGS2021

Metal accumulation in Lake Michigan prey fish: Influence of ontogeny, trophic position, and habitat

Developing an understanding of factors that influence the accumulation and magnification of heavy metals in fish of the Laurentian Great Lakes is central to managing ecosystem and human health. We measured muscle tissue concentrations of heavy metals in Lake Michigan prey fish that vary in habitat use, diet, and trophic position, including alewife, bloater, deepwater sculpin, round goby, rainbow smelt, and slimy sculpin. For each individual, we measured tissue concentrations of four metals (chromium [Cr], copper [Cu], manganese [Mn], and total mercury [THg]), stable isotope ratios for trophic position (δ 15 N and δ 13 C), and individual fish attributes (length, mass). Total mercury concentration was positively related to total length and δ 15 N. Of all species, round goby displayed one of the greatest increases in mercury per unit growth and was most isotopically distinct from other species. Profundal species (bloater, deepwater sculpin, slimy sculpin) had similar high THg tissue concentrations, possibly due to slower growth due to cold temperatures, whereas other species (alewife, round goby, rainbow smelt) showed more variation in THg. In contrast, other metals (Cr, Cu, Mn) had either a negative or no relationship to total length and δ 15 N, suggesting no bioaccumulation or biomagnification. Potential incorporation of mercury by sportfish may thus be related to species, age, diet, trophic position, and habitat of prey fish. Our findings serve as a foundation for understanding how heavy metals accumulate in Lake Michigan food webs and highlight the continued need for management of metal input and cycling in Lake Michigan.

Illinois, Indiana, Michigan, Wisconsin↗

USGS2005

Longer-term effects of selective thinning on microarthropod communities in a late-successional coniferous forest

Microarthropod densities within late-successional coniferous forests thinned 16–41 yr before sampling were compared with adjacent unthinned stands to identify longer term effects of thinning on this community. Soil and forest floor layers were sampled separately on eight paired sites. Within the forest floor oribatid, mesostigmatid, and to a marginal extent, prostigmatid mites, were reduced in thinned stands compared with unthinned stands. No differences were found for Collembola in the forest floor or for any mite suborder within the soil. Family level examination of mesostigmatid and prostigmatid mites revealed significant differences between stand types for both horizons. At the species level, thinning influenced numerous oribatid mites and Collembola. For oribatid mites, significant or marginally significant differences were found for seven of 15 common species in the forest floor and five of 16 common species in soil. Collembola were affected less, with differences found for one of 11 common species in the forest floor and three of 13 common species in soil. Multivariate analysis of variance and ordination indicated that forest thinning had little influence on the composition of oribatid mite and collembolan communities within either the forest floor or soil. Differences in microclimate or in the accumulation of organic matter on the forest floor were likely most responsible for the observed patterns of abundance. Considering the role that microarthropods play in nutrient cycling, determining the functional response of a wide range of taxa to thinning may be important to effective ecosystem management.

Oregon↗

USGS2013

Ecological limit functions relating fish community response to hydrologic departures of the ecological flow regime in the Tennessee River basin, United States

Ecological limit functions relating streamflow and aquatic ecosystems remain elusive despite decades of research. We investigated functional relationships between species richness and changes in streamflow characteristics at 662 fish sampling sites in the Tennessee River basin. Our approach included the following: (1) a brief summary of relevant literature on functional relations between fish and streamflow, (2) the development of ecological limit functions that describe the strongest discernible relationships between fish species richness and streamflow characteristics, (3) the evaluation of proposed definitions of hydrologic reference conditions, and (4) an investigation of the internal structures of wedge-shaped distributions underlying ecological limit functions. Twenty-one ecological limit functions were developed across three ecoregions that relate the species richness of 11 fish groups and departures from hydrologic reference conditions using multivariate and quantile regression methods. Each negatively sloped function is described using up to four streamflow characteristics expressed in terms of cumulative departure from hydrologic reference conditions. Negative slopes indicate increased departure results in decreased species richness. Sites with the highest measured fish species richness generally had near-reference hydrologic conditions for a given ecoregion. Hydrology did not generally differ between sites with the highest and lowest fish species richness, indicating that other environmental factors likely limit species richness at sites with reference hydrology. Use of ecological limit functions to make decisions regarding proposed hydrologic regime changes, although commonly presented as a management tool, is not as straightforward or informative as often assumed. We contend that statistical evaluation of the internal wedge structure below limit functions may provide a probabilistic understanding of how aquatic ecology is influenced by altered hydrology and may serve as the basis for evaluating the potential effect of proposed hydrologic changes.

Tennessee River basin↗

USGS2023

Estuarine salinity extremes: Using the Coastal Salinity Index to quantify the role of droughts, floods, hurricanes, and freshwater flow alteration

In the face of accelerating climate change, advancing understanding of how extreme climatic events influence estuarine salinities can help to inform resource management. Extreme salinities driven by droughts, hurricanes, floods, and freshwater flow alterations can lead to ecological transformations in estuarine ecosystems. Here, we applied the Coastal Salinity Index (CSI; Conrads and Darby 2017) to 22 years (1998–2020) of salinity data in a Louisiana estuary (Barataria Estuary, USA) to elucidate the impacts of extreme events on estuarine salinities. The CSI is an index to quantify salinity patterns at a specific location through long-term averages and deviations from historical average conditions. We calculated and compared CSI values for four stations distributed along an estuarine salinity gradient. We identified 10 events between 1998 and 2020 that produced extreme salinities, including two droughts, four hurricanes, three floods, and one freshwater diversion. The droughts of 2000 and 2006 caused surface water salinities to increase substantially throughout the estuary. The effects of hurricanes were highly variable, with some storms leading to elevated salinities throughout the entire estuary (e.g., Hurricanes Katrina and Rita in 2005), whereas other storms led to elevated salinities for some but not all stations (e.g., Hurricanes Gustav and Ike in 2008 or Hurricane Isaac in 2012). The opening of a freshwater river diversion in 2010 contributed to fresher conditions throughout the estuary and appeared to reduce or eliminate the increases in salinity that normally occur during the summer, although these effects were short-lived. Mississippi River floods in 2008, 2011, and 2019 reduced salinities throughout the estuary, but the effects were most pronounced in the lower estuary compared to the upper estuary. Collectively, our results advance understanding of the influence of extreme events on estuarine salinity regimes. Our analyses also highlight the value of the CSI for identifying periods with extreme salinities (i.e., extreme high or low salinities) via calculations that place salinity levels within and across estuaries within a historical context.

Louisiana↗

USGS2015

Archive of Sidescan Sonar and Swath Bathymetry Data Collected During USGS Cruise 13CCT04 Offshore of Petit Bois Island, Gulf Islands National Seashore, Mississippi, August 2013

In August of 2013, the U.S. Geological Survey conducted a geophysical survey offshore of Petit Bois Island, Mississippi. This effort was part of the U.S. Geological Survey Gulf of Mexico Science Coordination partnership with the U.S. Army Corps of Engineers to assist the Mississippi Coastal Improvements Program and the Northern Gulf of Mexico Ecosystem Change and Hazards Susceptibility Project, by mapping the shallow geologic stratigraphic framework of the Mississippi Barrier Island Complex. This geophysical survey will provide additional data necessary for scientists to define, interpret, and provide baseline bathymetry and seafloor habitat for this area, and to aid scientists in predicting future geomorphological changes of the islands with respect to climate change, storm impact, and sea-level rise. Furthermore, these data will provide information for barrier island restoration, particularly in Camille Cut, and protection for the historical Fort Massachusetts on Ship Island, Mississippi. The geophysical data were collected during one cruise ( USGS Field Activity Numbers 13CCT04 ) aboard the Research Vessel Tommy Munro offshore along the gulf side of Petit Bois Island, Gulf Islands National Seashore, Mississippi. Data were acquired with the following equipment: a Systems Engineering and Assessment, Ltd., SWATH plus interferometric sonar (468 kilohertz (kHz)), an EdgeTech 424 (4-24 kHz), an EdgeTech 525i chirp subbottom profiling system, and a Klein 3900 sidescan sonar system. This report serves as an archive of the processed interferometric swath bathymetry and sidescan sonar data. Geographic information system data products include an interpolated digital elevation model, an acoustic backscatter mosaic, trackline maps, and point data files. Additional files include error analysis maps, Field Activity Collection System logs, and formal Federal Geographic Data Committee metadata. NOTE: These data are scientific in nature and are not to be used for navigation. Any use of trade names is for descriptive purposes only and does not imply endorsement by the U.S. Government.

Mississippi↗

USGS1999

Sedimentation and bathymetry changes in Suisun Bay: 1867-1990

Understanding patterns of historical erosion and deposition in San Francisco Bay is crucial in managing such issues as locating deposits of sediment-associated contaminants, and the restoration of wetland areas. These problems were addressed by quantitatively examining historical hydrographic surveys. The data from five hydrographic surveys, made from 1867 to 1990, were analyzed using surface modeling software to determine long-term changes in the sediment system of Suisun Bay and surrounding areas. A surface grid displaying the bathymetry was created for each survey period, and the bathymetric change between survey periods was computed by differencing these grids. Patterns and volumes of erosion and deposition, sedimentation rates, and shoreline changes were derived from the resulting change grids. Approximately 115 million cubic meters of sediment were deposited in the Suisun Bay area from 1867 to 1887, the majority of which was debris from hydraulic gold mining in the Sierra Nevada. Just under two-thirds of the area of the study site was depositional during this time period, while less than one-third of it was erosional. However, over the entire study period, the Suisun Bay area lost sediment, indicating that a large amount of erosion occurred from1887 to 1990. In fact, this area lost sediment during each of the change periods between 1887 and 1990. Because erosion and deposition are processes that may vary over space and time, further analyses of more specific areas were done to examine spatial and temporal patterns. The change in the Suisun Bay area from being a largely depositional environment to an erosional one is the result of a combination of several factors. These factors include the regulation and subsequent cessation of hydraulic mining practices, and the increase in flood control and water distribution projects that have decreased sediment supply to the bay by reducing the frequency and duration of peak flow conditions. Another pattern shown by the changing bathymetry is the substantial decrease in the area of tidal flat (defined in this study as the area between mean lower low water and the shoreline), particularly in Grizzly Bay and Honker Bay. These tidal flats are important to the bay ecosystem, providing stability and biologic diversity.

California↗