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USGS2026

Space between houses influences movement and habitat selection of ungulates: Width as a novel metric of development

Wildlife often lose access to habitat due to housing development. The magnitude of indirect habitat loss can be conditional on the configuration of individual houses, but commonly used metrics (i.e. density or distance) can overlook the configuration of development. We introduce a novel framework to index the configuration of development based on the width of space between houses and associated structures. We use resource selection functions to assess the degree that GPS-collared elk ( Cervus canadensis ), mule deer ( Odocoileus hemionus ), pronghorn and moose ( Alces alces ) on winter range and on migration routes use space between houses within northwest Wyoming, USA, near the towns of Cody and Jackson. Further, to help inform regulations aiming to promote wildlife movement across a gradient of land uses, we differentiated between individuals residing in primarily rural and exurban areas. Rural populations of elk, mule deer, pronghorn and moose avoided spaces narrower than 2 km and never used spaces narrower than 50 m between houses, whereas exurban populations of elk, mule deer and moose selected for spaces narrower than 2 km but avoided spaces narrower than 50 m. We identified cutoffs in rural and exurban areas where space may become too narrow for most animals to use. Through this metric, managers and policy makers can inform the necessary width to maintain wildlife movement through corridors. Our width metric can be applied to other systems and our workflow is publicly available ( https://wildlifemovetools.org/width-calculator ) so users can estimate the width of space between structures in their focal areas. Synthesis and applications . In rural areas, maintaining spaces between houses >500 m will likely facilitate ungulate movement. To fully conserve functional habitat, such as unimpeded habitat use along migration corridors, maintaining spaces approximately >2.5 km between houses will likely be necessary.

Wyoming↗

USGS2011

Optical maturity variation in lunar spectra as measured by Moon Mineralogy Mapper data

High spectral and spatial resolution data from the Moon Mineralogy Mapper (M3) instrument on Chandrayaan-1 are used to investigate in detail changes in the optical properties of lunar materials accompanying space weathering. Three spectral parameters were developed and used to quantify spectral effects commonly thought to be associated with increasing optical maturity: an increase in spectral slope ("reddening"), a decrease in albedo ("darkening"), and loss of spectral contrast (decrease in absorption band depth). Small regions of study were defined that sample the ejecta deposits of small fresh craters that contain relatively crystalline (immature) material that grade into local background (mature) soils. Selected craters are small enough that they can be assumed to be of constant composition and thus are useful for evaluating trends in optical maturity. Color composites were also used to identify the most immature material in a region and show that maturity trends can also be identified using regional soil trends. The high resolution M3 data are well suited to quantifying the spectral changes that accompany space weathering and are able to capture subtle spectral variations in maturity trends. However, the spectral changes that occur as a function of maturity were observed to be dependent on local composition. Given the complexity of space weathering processes, this was not unexpected but poses challenges for absolute measures of optical maturity across diverse lunar terrains. Copyright 2011 by the American Geophysical Union.

Journal of Geophysical Research E: Planets↗

USGS2025

Assessing gap-filled Landsat land surface temperature time-series data using different observational datasets

Landsat Analysis Ready Data (ARD)-based time-series present challenges in monitoring surface urban heat islands (SUHI) due to rapid changes in land surface temperature (LST) compared to cloud-free satellite observations. This research investigates the use of a spatiotemporal gap-filling model as a feasible and cost-effective solution to produce Landsat time-series LST products with both high spatial resolution and temporal frequency. The study identified and filled Landsat ARD thermal times-series data gaps due to missing data, cloud and shadow effects, and data quality. The accuracy of Landsat gap-filled products was assessed using randomly selected clear observations of Landsat and uncertainty products from the gap-filling model and was evaluated using various existing temperature datasets, including climate data from NOAA Global Historical Climate Network station observations, Daily Surface Weather and Climatological Summaries (DAYMET), and LST including MODIS, VIIRS and ECOSTRESS. The result suggests that the gap-filled Landsat LST has significant correlations with existing datasets including field observation and remote sensing data derived from other sensors that have similar monthly and seasonal variation patterns. The uncertainty maps show spatial distributions of uncertainty for gap-filled pixels that have high or low uncertainties. The Landsat gap-filled time-series datasets can be used to measure annual, seasonal, or even monthly landscape thermal conditions, which are useful for SUHI and relevant research, and to perform multi-decade time-series LST change analysis under climate change conditions.

International Journal of Remote Sensing↗

USGS2024

Prey selection by black-footed ferrets (Mustela nigripes): Implications for intersexual resource partitioning and conservation

Intraspecific resource partitioning may play a critical role in how predators optimize prey selection. The Black-footed Ferret ( Mustela nigripes ; henceforth, ferret) is a highly specialized predator of prairie dogs ( Cynomys spp.; henceforth, PDs). Adult ferrets are sexually dimorphic and PDs are of similar size making them a difficult prey item. PD young are born 6 to 8 weeks prior to births of ferrets, producing a crop of smaller prey items during a period when energetic needs of female ferrets are highest. We asked whether relatively small female ferrets select small PDs as prey. We examined survival rates from early to late summer for large and small black-tailed PDs ( Cynomys ludovicianus ) in Montana and South Dakota as a function of their distance to adult male and female ferrets using capture–mark–recapture of PDs and simultaneous summer monitoring of ferret locations. Survival of small PDs (<600 g) was low when a female ferret was nearby, but distance to nearest female ferret did not affect survival of large PDs. Distance to the nearest male ferret did not influence survival regardless of PD size. Reduced competition from males for a critical food resource needed by females rearing young would benefit fitness of both sexes. If female ferrets depend on young PDs during their reproductive period, existing habitat models may substantially overestimate ferret carrying capacity.

Journal of Mammalogy↗

USGS1990

Multiplication of infectious hematopoietic necrosis virus in rainbow trout following immersion infection: whole-body assay and immunohistochemistry

The sites of replication of infectious hematopoietic necrosis virus (IHNV) in infected tissues were detected in fingerling rainbow trout Oncorhynchus mykiss by in situ histologic techniques following immersion infection. Virus antigens in tissues were detected by a neutralizing mouse monoclonal antibody and a one-step anti-mouse biotin-streptavidin conjugated to horseradish peroxidase. The efficiency of infection and virulence of the virus determined by mortality rates showed high virulence of the selected IHNV isolates, and viral replication in individual fish showed that virus content of the fish increased rapidly from the second day to the seventh day postinfection. The earliest viral lesions following infection were detected in the epidermis of the pectoral fins, opercula, and ventral surface of the body. Virus lesions became evident in kidneys on the third day. By the fifth day, when there was a significant increase in virus titer, foci of viral replication were detected in gill tissue and in the anterior internal tissues below the epidermis. Subsequently, extensive virus replication and tissue destruction were observed in the spleen, dorsal adipose tissues, ventricle, and pseudobranch. Replication in the liver, the muscularis layers of the digestive tract, and the general body musculature followed later. These infection experiments indicated that the epidermis and gills of fish constitute important sites of early IHNV replication.

Journal of Aquatic Animal Health↗

USGS2011

Does small-perimeter fencing inhibit mule deer or pronghorn use of water developments?

Wildlife water development can be an important habitat management strategy in western North America for many species, including both pronghorn (Antilocapra americana) and mule deer (Odocoileus hemionus). In many areas, water developments are fenced (often with small-perimeter fencing) to exclude domestic livestock and feral horses. Small-perimeter exclosures could limit wild ungulate use of fenced water sources, as exclosures present a barrier pronghorn and mule deer must negotiate to gain access to fenced drinking water. To evaluate the hypothesis that exclosures limit wild ungulate access to water sources, we compared use (photo counts) of fenced versus unfenced water sources for both pronghorn and mule deer between June and October 2002–2008 in western Utah. We used model selection to identify an adequate distribution and best approximating model. We selected a zero-inflated negative binomial distribution for both pronghorn and mule deer photo counts. Both pronghorn and mule deer photo counts were positively associated with sampling time and average daily maximum temperature in top models. A fence effect was present in top models for both pronghorn and mule deer, but mule deer response to small-perimeter fencing was much more pronounced than pronghorn response. For mule deer, we estimated that presence of a fence around water developments reduced photo counts by a factor of 0.25. We suggest eliminating fencing of water developments whenever possible or fencing a big enough area around water sources to avoid inhibiting mule deer. More generally, our results provide additional evidence that water development design and placement influence wildlife use. Failure to account for species-specific preferences will limit effectiveness of management actions and could compromise research results.

Utah↗

USGS1995

Introduction to the Proceedings of the 1994 International Conference on Restoration of Lake Trout in the Laurentian Great Lakes

Lake trout (Salvelinus namaycush) restoration in the Great Lakes began in the 1950s when stocking of artificially propagated lake trout was coupled with the first attempts at sea lamprey (Petromyzon marinus) control. A major milestone in the restoration process was recorded when a selective sea lamprey larvicide was identified in 1958 (Applegate et al. 1958) and then applied broad scale in Lake Superior in 1958-60 (Applegate et al. 1961). Other milestones include the expansion of the sea lamprey control programs into Lakes Michigan and Huron in 1960 (sustained usage in Lake Huron began in 1966, Smith and Tibbles 1980), Lake Ontario in 1971-72 (Elrod et al. 1995), and Lake Erie in 1986 (Cornelius et al. 1995). Following the collapse of lake trout in the Great Lakes and the implementation of massive stocking of hatchery-reared fish and effective sea lamprey control, the first documented evidence of nearshore natural reproduction of lake trout was in Lake Superior in 1965 (Dryer and King 1968), in Lake Michigan in 1980 (Jude et al. 1981), in Lake Huron in 1981-82 (Nester and Poe 1984), and in Lake Ontario in 1986 (Marsden et al. 1988).

Journal of Great Lakes Research↗

USGS2008

Diurnal and vertical variability of the sensible heat and carbon dioxide budgets in the atmospheric surface layer

The diurnal and vertical variability of heat and carbon dioxide (CO2) in the atmospheric surface layer are studied by analyzing measurements from a 213 in tower in Cabauw (Netherlands). Observations of thermodynamic variables and CO2 mixing ratio as well as vertical profiles of the turbulent fluxes are used to retrieve the contribution of the budget terms in the scalar conservation equation. On the basis of the daytime evolution of turbulent fluxes, we calculate the budget terms by assuming that turbulent fluxes follow a linear profile with height. This assumption is carefully tested and the deviation ftom linearity is quantified. The budget calculation allows us to assess the importance of advection of heat and CO2 during day hours for three selected days. It is found that, under nonadvective conditions, the diurnal variability of temperature and CO2 is well reproduced from the flux divergence measurements. Consequently, the vertical transport due to the turbulent flux plays a major role in the daytime evolution of both scalars and the advection is a relatively small contribution. During the analyzed days with a strong contribution of advection of either heat or carbon dioxide, the flux divergence is still an important contribution to the budget. For heat, the quantification of the advection contribution is in close agreement with results from a numerical model. For carbon dioxide, we qualitatively corroborate the results with a Lagrangian transport model. Our estimation of advection is compared with, traditional estimations based on the Net Ecosystem-atmosphere Exchange (NEE). Copyright 2008 by the American Geophysical Union.

Journal of Geophysical Research D: Atmospheres↗

USGS2009

Case study of a full-scale evapotranspiration cover

The design, construction, and performance analyses of a 6.1ha evapotranspiration (ET) landfill cover at the semiarid U.S. Army Fort Carson site, near Colorado Springs, Colo. are presented. Initial water-balance model simulations, using literature reported soil hydraulic data, aided selection of borrow-source soil type(s) that resulted in predictions of negligible annual drainage (⩽1mm∕year). Final construction design was based on refined water-balance simulations using laboratory determined soil hydraulic values from borrow area natural soil horizons that were described with USDA soil classification methods. Cover design components included a 122cm thick clay loam (USDA), compaction ⩽80% of the standard Proctor maximum dry density (dry bulk density ∼1.3Mg/m3), erosion control measures, top soil amended with biosolids, and seeding with native grasses. Favorable hydrologic performance for a 5year period was documented by lysimeter-measured and Richards’-based calculations of annual drainage that were all <0.4mm∕year. Water potential data suggest that ET removed water that infiltrated the cover and contributed to a persistent driving force for upward flow and removal of water from below the base of the cover.

Journal of Geotechnical and Geoenvironmental Engin↗

USGS2007

Multiple-species analysis of point count data: A more parsimonious modelling framework

1. Although population surveys often provide information on multiple species, these data are rarely analysed within a multiple-species framework despite the potential for more efficient estimation of population parameters. 2. We have developed a multiple-species modelling framework that uses similarities in capture/detection processes among species to model multiple species data more parsimoniously. We present examples of this approach applied to distance, time of detection and multiple observer sampling for avian point count data. 3. Models that included species as a covariate and individual species effects were generally selected as the best models for distance sampling, but group models without species effects performed best for the time of detection and multiple observer methods. Population estimates were more precise for no-species-effect models than for species-effect models, demonstrating the benefits of exploiting species' similarities when modelling multiple species data. Partial species-effect models and additive models were also useful because they modelled similarities among species while allowing for species differences. 4. Synthesis and applications. We recommend the adoption of multiple-species modelling because of its potential for improved population estimates. This framework will be particularly beneficial for modelling count data from rare species because information on the detection process can be 'borrowed' from more common species. The multiple-species modelling framework presented here is applicable to a wide range of sampling techniques and taxa. ?? 2007 The Authors.

Journal of Applied Ecology↗

USGS2007

Potential effects of climate change on ground water in Lansing, Michigan

Computer simulations involving general circulation models, a hydrologic modeling system, and a ground water flow model indicate potential impacts of selected climate change projections on ground water levels in the Lansing, Michigan, area. General circulation models developed by the Canadian Climate Centre and the Hadley Centre generated meteorology estimates for 1961 through 1990 (as a reference condition) and for the 20 years centered on 2030 (as a changed climate condition). Using these meteorology estimates, the Great Lakes Environmental Research Laboratory's hydrologic modeling system produced corresponding period streamflow simulations. Ground water recharge was estimated from the streamflow simulations and from variables derived from the general circulation models. The U.S. Geological Survey developed a numerical ground water flow model of the Saginaw and glacial aquifers in the Tri-County region surrounding Lansing, Michigan. Model simulations, using the ground water recharge estimates, indicate changes in ground water levels. Within the Lansing area, simulated ground water levels in the Saginaw aquifer declined under the Canadian predictions and increased under the Hadley.

Michigan↗

USGS2021

Behavioural response of sea lamprey (Petromyzon marinus) to acoustic stimuli in a small stream

Sea lamprey ( Petromyzon marinus ) are invasive in the Laurentian Great Lakes and parasitically feed on valued fishes. Migration barriers and selective pesticides are used to control sea lamprey, but there is a desire to develop additional control tools such as traps with nonphysical deterrents. Sound has been used as a deterrent for other invasive species, but its potential for manipulating sea lamprey behavior in natural stream conditions remains untested. Here, behavioral responses of upstream-migrating adult sea lamprey in response to low frequency sounds of 70 or 90 Hz was tracked in a small stream (8 m wide) using passive integrated transponder (PIT) telemetry. The low frequency sounds shifted sea lamprey distribution, with up to 30% more sea lamprey detected on PIT antennas without sound compared with PIT antennas with sound playing. Future studies could continue testing low frequency sounds in larger rivers with larger speakers for use as a natural deterrent at sea lamprey barriers to push sea lamprey toward traps.

Canadian Journal of Fisheries and Aquatic Sciences↗

USGS1977

Radioactive springs geochemical data related to uranium exploration

Radioactive mineral springs and wells at 33 localities in the States of Colorado, Utah, Arizona and New Mexico in the United States were sampled and studied to obtain geochemical data which might be used for U exploration. The major source of radioactivity at mineral spring sites is 226 Ra. Minor amounts of 228 Ra, 238 U and 232 Th are also present. Ra is presumed to have been selectively removed from possibly quite deep uranium-mineralized rock by hydrothermal solutions and is either precipitated at the surface or added to fresh surface water. In this way, the source rocks influence the geochemistry of the spring waters and precipitates. Characteristics of the spring waters at or near the surface are also affected by variations in total dissolved solids, alkalinity, temperature and co-precipitation. Spring precipitates, both hard and soft, consist of four major types: (1) calcite travertine; (2) iron- and arsenic-rich precipitates; (3) manganese- and barium-rich precipitates; and (4) barite, in some instances accompanied by S, Ra and U, if present in the spring water, are co-precipitated with the barite, Mn-Ba and Fe-As precipitates. Using parameters based on U and Ra concentrations in waters and precipitates springsite areas are tentatively rated for favourability as potential uraniferous areas.

Journal of Geochemical Exploration↗

USGS2021

Assessment of a claimed ultra-low frequency electromagnetic (ULFEM) earthquake precursor

The rate of occurrence of anomalous ultra-low frequency electromagnetic (ULFEM) pulses has been claimed to have increased days to weeks prior to the M5.4 2007 and M4.0 2010 Alum Rock earthquakes. We re-examine the previously reported ultra-low frequency (ULF: 0.01–10 Hz) magnetic data recorded at a QuakeFinder site located 9 km from the earthquake hypocentre, and compare to data from a nearby Stanford-USGS site located 42 km from the hypocentre, to analyse the characteristics of the pulses and assess their origin. Using pulse definitions and pulse-counting algorithms analogous to those previously reported, we corroborate the increase in pulse counts before the 2007 Alum Rock earthquake at the QuakeFinder station, but we note that the number of pulses depends on chosen temporal and amplitude detection thresholds. These thresholds are arbitrary because we lack a clear physical model or basis for their selection. We do not see the same increase in pulse counts before the 2010 Alum Rock earthquake at the QuakeFinder or Stanford-USGS stations. In addition, the majority of pulses in the QuakeFinder data and Stanford-USGS data do not match temporally, indicating the pulses lack a common origin and are not from lightning or solar-driven ionospheric/magnetospheric disturbances. Our assessment of the temporal distribution of pulse counts shows pulse counts increase during peak human activity hours, suggesting these pulses result from local cultural noise and are not tectonic in origin. The many unknowns about the character and even existence of precursory earthquake pulses means that standard numerical and statistical tests cannot easily be applied. Yet here we show that exhaustive investigation of many different aspects of ULFEM signals can be used to properly characterize their origin.

California↗

USGS2013

American badgers selectively excavate burrows in areas used by black-footed ferrets: implications for predator avoidance

We evaluated how American badgers ( Taxidea taxus ) might exert selective pressure on black-footed ferrets ( Mustela nigripes ) to develop antipredator defenses. In a colony of black-tailed prairie dogs ( Cynomys ludovicianus ) in South Dakota, badgers concentrated their activities where burrow openings and prairie dogs were abundant, a selective behavior that was exhibited by ferrets in the same colony. Badgers excavated burrows more often when in areas recently used by a ferret, suggesting that badgers hunt ferrets or steal prey from ferrets, or both. We also conducted an analysis of survival studies for ferrets and Siberian polecats ( M. eversmanii ) released onto prairie dog colonies. This polecat is the ferret's ecological equivalent but evolved without a digging predator. Badgers accounted for 30.0% of predation on polecats and 5.5% of predation on ferrets. In contrast, both polecats and ferrets have evolutionary experience with canids, providing a plausible explanation for the similar relative impact of coyotes ( Canis latrans ) on them (65.0% and 67.1% of predation, respectively). We hypothesize that ferrets and badgers coexist because ferrets are superior at exploitation competition and are efficient at avoiding badgers, and badgers are superior at interference competition.

South Dakota↗

USGS1999

Brucellosis in Yellowstone National Park bison: Quantitative serology and infection

We collected complete sets of tissues, fluids, and swabs (approx 30) from 37 Yellowstone National Park (YNP) female bison (Bison bison) killed as a result of management actions by the Montana Department of Livestock and YNP personnel. Our goal was to establish the relation between blood tests demonstrating an animal has antibody to Brucella and the potential of that animal to be infected during the second trimester of pregnancy, the time when most management actions are taken. Twenty-eight of the 37 bison were seropositive adults (27) or a seropositive calf (1). We cultured samples using macerated whole tissues plated onto 4 Brucella-selective media and incubated with added CO2 for 1 week. Specimens from 2 adult seropositive females were contaminated, thus eliminating them from our data. Twelve of the remaining 26 seropositive adult and calf female bison (46%) were culture positive for Brucella abortus from 1 or more tissues. Culture positive adult females had high serologic titers. All 11 adults measured <0.115 on the Particle Concentration Fluorescence Immunoassay (PCFIA), and 9 (82%) were <0.085. Complement fixation (CF) titers were >3+ at 1:40 for 10 of 11 (91%) animals. All culture positive female adults had either a PCFIA ???0.080 or a CF reaction ???4+ at 1:80. However 5 (36%) bison with high titers were culture negative for B. abortus. Our findings on the relation between Brucella serology and culture are similar to those reported from studies of chronically infected cattle herds.

Journal of Wildlife Management↗

USGS2021

Flow dynamics influence fish recruitment in hydrologically connected river-reservoir landscapes

Hydrologic processes are often important determinants of successful recruitment of native fishes. However, water management practices can result in abnormal changes in daily and seasonal hydrology patterns. Rarely has fish recruitment across river–reservoir landscapes been considered in relation to flow management, despite the direct relationship between reservoir water management and the resulting upstream and downstream hydrology. We evaluated the relationships between lotic and lentic hydrology and recruitment of two native broadcast-spawning fishes, Freshwater Drum Aplodinotus grunniens and Gizzard Shad Dorosoma cepedianum . Four seasonal periods for each species were identified that related to the species’ spawning biology, from which we derived our remaining hydrology variables. Annual hydrology variables were also considered in our analysis. We developed regression models in conjunction with a model-selection procedure for each species and habitat type based on the catch-curve residuals from fish populations in hydrologically connected river–reservoir systems in the Ozark Highland and Ouachita Mountain ecoregions, USA. Our results indicated that recruitment of reservoir Freshwater Drum was negatively correlated to annual reservoir retention time. In lotic habitats, Freshwater Drum recruitment was positively correlated with prespawn discharge conditions and negatively correlated with annual flow variability. Similarly, riverine Gizzard Shad recruitment was positively correlated to the frequency of high-flow pulses during the spawning period. Our results indicate that releasing reservoir water to best mimic relatively natural flow patterns may benefit some broadcast-spawning species that occupy both lentic and downstream lotic environments, especially during the spring. This information, combined with future efforts on additional spawning guilds, will provide a foundation for developing holistic river–reservoir water-allocation plans.

Missouri, Oklahoma↗

USGS2019

Multi-species duck harvesting using dynamic programming and multi-criteria decision analysis

1.Multiple species are often exposed to a common hunting season, but harvest and population objectives may not be fully achieved if harvest potential varies among species and/or species abundances are not correlated through time. Our goal was to develop an approach for setting a common hunting season that would recognize heterogeneity in species productivity and would select annual hunting seasons conditioned on the status of individual species. 2.We first used stochastic dynamic programming to generate optimal, state‐dependent harvest strategies for 18 candidate regulatory scenarios. We simulated the performance of these strategies, and then used multi‐criteria decision making to identify preferred regulatory scenarios for duck hunting seasons in the Atlantic Flyway of the U.S. 3.Generally, estimates of annual population size were not correlated among species. Mallards had the highest estimated intrinsic rate of growth, green‐winged teal, wood ducks, and ring‐necked ducks had intermediate values, and goldeneyes were the least productive. Estimated carrying capacity was highest for mallards and lowest for green‐winged teal. 4.Managers had greatest interest in maximizing season length (33%) and aggregate duck abundance (28%), and less interest in maximizing aggregate harvest (19%) and the number of years between a change in hunting season regulations (19%). Several regulatory scenarios provided acceptable tradeoffs among these objectives. 5.Synthesis and applications. Separate hunting seasons for various species of game may be untenable, either due to the added cost and regulatory complexity, or because selective harvesting of stocks may be difficult due to problems in species identification. Rather than averaging species‐specific productivities, or basing hunting seasons on the least (or most) productive species, we describe an approach in which productivity and annual population status are considered explicitly for each species. By combining stochastic dynamic programming with multi‐criteria decision analysis, we can identify a regulatory strategy that can address a diverse set of objectives and explicitly recognize the tradeoffs among them. To meet the Atlantic Flyway's objectives as identified by waterfowl managers, our results suggest a regulatory strategy in which the harvest is targeted at 98% of aggregate maximum sustainable yield, most emphasis is placed on accumulating harvests of mallards and wood ducks, and by using a set of regulatory options that are more conservative than those currently in use.

Journal of Applied Ecology↗