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Coordinating standards and applications for optical water quality sensor networks

Joint USGS-CUAHSI Workshop: In Situ Optical Water Quality Sensor Networks; Shepherdstown, West Virginia, 8-10 June 2011; Advanced in situ optical water quality sensors and new techniques for data analysis hold enormous promise for advancing scientific understanding of aquatic systems through measurements of important biogeochemical parameters at the time scales over which they vary. High-frequency and real-time water quality data also provide the opportunity for early warning of water quality deterioration, trend detection, and science-based decision support. However, developing networks of optical sensors in freshwater systems that report reliable and comparable data across and between sites remains a challenge to the research and monitoring community. To address this, the U.S. Geological Survey (USGS) and the Consortium of Universities for the Advancement of Hydrologic Science, Inc. (CUAHSI), convened a 3-day workshop to explore ways to coordinate development of standards and applications for optical sensors, as well as handling, storage, and analysis of the continuous data they produce.

Conference Paper

Density currents in the Chicago River: Characterization, effects on water quality, and potential sources

Bidirectional flows in a river system can occur under stratified flow conditions and in addition to creating significant errors in discharge estimates, the upstream propagating currents are capable of transporting contaminants and affecting water quality. Detailed field observations of bidirectional flows were made in the Chicago River in Chicago, Illinois in the winter of 2005-06. Using multiple acoustic Doppler current profilers simultaneously with a water-quality profiler, the formation of upstream propagating density currents within the Chicago River both as an underflow and an overflow was observed on three occasions. Density differences driving the flow primarily arise from salinity differences between intersecting branches of the Chicago River, whereas water temperature is secondary in the creation of these currents. Deicing salts appear to be the primary source of salinity in the North Branch of the Chicago River, entering the waterway through direct runoff and effluent from a wastewater-treatment plant in a large metropolitan area primarily served by combined sewers. Water-quality assessments of the Chicago River may underestimate (or overestimate) the impairment of the river because standard water-quality monitoring practices do not account for density-driven underflows (or overflows). Chloride concentrations near the riverbed can significantly exceed concentrations at the river surface during underflows indicating that full-depth parameter profiles are necessary for accurate water-quality assessments in urban environments where application of deicing salt is common.

Illinois

Delivering real-time water hazard information through human-centered design

On Memorial Day, 2015, catastrophic flooding throughout central Texas resulted in the loss of 13 lives and caused millions of dollars in damages (Furl 2018). The flooding exposed the need for water resource managers, first responders, and the public to have better real-time access to streamflow gaging stations and weather information. In 2016, the U.S. Geological Survey (USGS) developed the Texas Water Dashboard (Dashboard) to combine datasets produced by multiple agencies and display them in a single web-mapping application.

Texas

Proceedings of the U.S. Geological Survey Eighth Biennial Geographic Information Science Workshop and first The National Map Users Conference, Denver, Colorado, May 10-13, 2011

The U.S. Geological Survey (USGS) is sponsoring the first The National Map Users Conference in conjunction with the eighth biennial Geographic Information Science (GIS) Workshop on May 10-13, 2011, in Lakewood, Colorado. The GIS Workshop will be held at the USGS National Training Center, located on the Denver Federal Center, Lakewood, Colorado, May 10-11. The National Map Users Conference will be held directly after the GIS Workshop at the Denver Marriott West, a convention hotel in the Lakewood, Colorado area, May 12-13. The National Map is designed to serve the Nation by providing geographic data and knowledge for government, industry, and public uses. The goal of The National Map Users Conference is to enhance communications and collaboration among the communities of users of and contributors to The National Map, including USGS, Department of the Interior, and other government GIS specialists and scientists, as well as the broader geospatial community. The USGS National Geospatial Program intends the conference to serve as a forum to engage users and more fully discover and meet their needs for the products and services of The National Map. The goal of the GIS Workshop is to promote advancement of GIS and related technologies and concepts as well as the sharing of GIS knowledge within the USGS GIS community. This collaborative opportunity for multi-disciplinary GIS and associated professionals will allow attendees to present and discuss a wide variety of geospatial-related topics. The Users Conference and Workshop collaboration will bring together scientists, managers, and data users who, through presentations, posters, seminars, workshops, and informal gatherings, will share accomplishments and progress on a variety of geospatial topics. During this joint event, attendees will have the opportunity to present or demonstrate their work; to develop their knowledge by attending hands-on workshops, seminars, and presentations given by professionals from USGS and other Federal Agencies, GIS related companies, and academia; and to network with other professionals to develop collaborative opportunities. Specific conference topics include scientific and modeling applications using The National Map, opportunities for partnerships, and advances in geospatial technologies. The first part of the week will be the GIS Workshop, offered as a pre-conference seminar. It will focus on hands-on GIS training and seminars concerning current topics of geospatial interest. The focus of the USGS GIS Workshop is to showcase specific techniques and concepts for using GIS in support of science. The presentations will be educational and not a marketing endeavor. To promote awareness of and interaction with selected USGS corporate and local science center data products, as well as promoting collaboration, a “GIS Olympics” event will be held Tuesday evening during the GIS Workshop. The second part of the week will feature interactive briefings and discussions on issues and opportunities of The National Map. The focus of the Users Conference will be on the role of The National Map in supporting science initiatives, emergency response, land and wildlife management, and other activities. All presentations at the Users Conference include use or innovations related to a The National Map data theme or application. On Wednesday evening, a poster session is being held as a combined event for all attendees and as a juncture between the events. On Thursday evening, the Henry Gannett Award will be presented. Additionally, poster awards will be presented. Several prominent speakers are featured at plenary sessions at The National Map Users Conference, including Deanna A. Archuleta, Deputy Assistant Secretary for Water and Science, Department of the Interior; Dr. Barbara P. Buttenfield, Professor of Geography at the University of Colorado in Boulder; best-selling author Frederick Reuss; and Dr. Joel Scheraga, Senior Advisor for Climate Adaptation, U.S. Environmental Protection Agency. Additionally, panel discussions have attracted participation from notable experts from government, academia, and the private sector. This Proceedings volume will serve as an activity reference for workshop attendees, as well as an archive of technical abstracts presented at the workshop. Author, co-author, and presenter names, affiliations, and contact information are listed with presentation titles with the abstracts. Some hands-on sessions are offered twice; in these instances, abstracts submitted for publication are presented in the proceedings on both days on which they are offered.

Scientific Investigations Report

Health-Based Screening Levels and their Application to Water-Quality Data

To supplement existing Federal drinking-water standards and guidelines, thereby providing a basis for a more comprehensive evaluation of contaminant-occurrence data in a human-health context, USGS began a collaborative project in 1998 with USEPA, the New Jersey Department of Environmental Protection, and the Oregon Health & Science University to calculate non-enforceable health-based screening levels. Screening levels were calculated for contaminants that do not have Maximum Contaminant Level values using a consensus approach that entailed (1) standard USEPA Office of Water methodologies (equations) for establishing Lifetime Health Advisory (LHA) and Risk-Specific Dose (RSD) values for the protection of human health, and (2) existing USEPA human-health toxicity information.

Fact Sheet

A land data assimilation system for sub-Saharan Africa food and water security applications

Seasonal agricultural drought monitoring systems, which rely on satellite remote sensing and land surface models (LSMs), are important for disaster risk reduction and famine early warning. These systems require the best available weather inputs, as well as a long-term historical record to contextualize current observations. This article introduces the Famine Early Warning Systems Network (FEWS NET) Land Data Assimilation System (FLDAS), a custom instance of the NASA Land Information System (LIS) framework. The FLDAS is routinely used to produce multi-model and multi-forcing estimates of hydro-climate states and fluxes over semi-arid, food insecure regions of Africa. These modeled data and derived products, like soil moisture percentiles and water availability, were designed and are currently used to complement FEWS NET’s operational remotely sensed rainfall, evapotranspiration, and vegetation observations. The 30+ years of monthly outputs from the FLDAS simulations are publicly available from the NASA Goddard Earth Science Data and Information Services Center (GES DISC) and recommended for use in hydroclimate studies, early warning applications, and by agro-meteorological scientists in Eastern, Southern, and Western Africa.

Scientific Data

Bayesian applications in environmental and ecological studies with R and Stan

Modern ecological and environmental sciences are dominated by observational data. As a result, traditional statistical training often leaves scientists ill-prepared for the data analysis tasks they encounter in their work. Bayesian methods provide a more robust and flexible tool for data analysis, as they enable information from different sources to be brought into the modelling process. Bayesian Applications in Evnironmental and Ecological Studies with R and Stan provides a Bayesian framework for model formulation, parameter estimation, and model evaluation in the context of analyzing environmental and ecological data. Features: An accessible overview of Bayesian methods in environmental and ecological studies Emphasizes the hypothetical deductive process, particularly model formulation Necessary background material on Bayesian inference and Monte Carlo simulation Detailed case studies, covering water quality monitoring and assessment, ecosystem response to urbanization, fisheries ecology, and more Advanced chapter on Bayesian applications, including Bayesian networks and a change point model Complete code for all examples, along with the data used in the book, are available via GitHub The book is primarily aimed at graduate students and researchers in the environmental and ecological sciences, as well as environmental management professionals. This is a group of people representing diverse subject matter fields, who could benefit from the potential power and flexibility of Bayesian methods.

Book

Long short-term memory models to quantify long-term evolution of streamflow discharge and groundwater depth in Alabama

Long short-term memory (LSTM) models have been shown to be efficient for rainfall-runoff modeling, and to a lesser extent, for groundwater depth forecasting. In this study, LSTMs were applied to quantify the spatiotemporal evolution of surface and subsurface hydrographs in Alabama in the Southeastern United States, where water sustainability has not been fully quantified across spatiotemporal scales. First, the surface water LSTM model with extensive dynamic (precipitation and other weather variables) and static (basin characteristics) inputs predicted the main characteristics of streamflow for six years at 19 gauged basins in Alabama. The model tended to underestimate extremely high streamflow but adding drainage density as an input feature slightly improved the predictions of extreme events. Second, to predict the groundwater depth evolution, a groundwater LSTM (GW-LSTM) model was proposed and applied using static inputs capturing the aquifers' hydrogeological properties and dynamic inputs of meteorological information. Three precipitation scenarios were also explored to evaluate the groundwater hydrograph evolution in the next two decades. The GW-LSTM model predicted the general trend of daily groundwater depth fluctuations (at 21 wells distributed across Alabama from 1990 to 2021) including most extremely high groundwater levels, and recovered groundwater depth for locations withheld from model training and validation. This study, therefore, extended the application of LSTMs in quantifying the spatiotemporal evolution of surface water and groundwater, two manifestations of a single integrated resource.

Alabama

Quartz solubility in hydrothermal seawater: An experimental study and equation describing quartz solubility for up to 0.5 M NaCl solutions

Experimental investigations confirm an increase of quartz solubility in sea-water relative to distilled water. Combination of the experimental data with published data, most of which related to distilled water, permitted construction of a database for calculating an equation that fits all the data. Application of the equation indicates a shallower depth of circulation for sea- floor hydrothermal waters than has previously been calculated. Use of the equation as a quartz geothermometer-geobarometer has applications not only for hydrothermal sea-water systems, but also for other geothermal and geological systems.

American Journal of Science

Principles of riverscape health

Riverscapes are the integration of terrestrial and aquatic systems from headwaters to estuaries that provide habitat and ecosystem benefits when in good health. However, current riverscape degradation is pervasive, impairing the function and resulting benefits of these systems. Healthy riverscapes are adaptive and some can ‘heal’ after disturbance with minimal to no human assistance. As riverscape health is threatened, a need exists to address current degradation and understand the potential for riverscape restoration—concisely communicating what comprises healthy riverscapes is essential to direct limited resources and increase efficacy of restoration and conservation efforts. Healthy riverscapes have (i) space to interact within their valley bottom; (ii) natural flow, sediment, and vegetation regimes appropriate to the biophysical setting and river type; and (iii) structural forcing to support diversity and that creates varied residence times for water, sediment, and vegetation. These three principles are grounded in interdisciplinary science and lessons from riverscape scientists and restoration practitioners across the world. Understanding the context, anthropogenic influences, boundary conditions, and legacy effects influencing riverscapes is essential for the appropriate application of these principles in pursuit of achieving riverscape health. Emphasizing a holistic, biogeomorphic view of riverscapes through these principles can guide policies, restoration actions, and monitoring frameworks that ensure that riverscapes remain capable of accommodating and adjusting to disturbances while continuing to support biodiversity and human benefits.

WIREsWATER (Wiley Interdisciplinary Reviews Primer

Water Resources Research October 1, 1979 - September 30, 1980: Summary statements of research activities by the Water Resources Division

Research in the WRD had its beginnings in the late 1950's when the "core research" line item was added to the Congressional budget. Since this time the Federal program has grown from a "basic sciences" program to one that includes a broad spectrum of basic and applied scientific investigations. Water resources research in WRD includes the study of water in all its phases and uses the basic sciences of mathematics, chemistry, physics, biology, geology and engineering to gain a fundamental understanding of the processes that affect the movement of water and its chemical constituents through hydrologic systems. The basic knowledge and methodologies derived from water resources research are applicable not only to the solution of current problems associated with the Nation's water resources, but also to anticipated hydrologic issues.

Report

Geostatistical estimation of the bottom altitude and thickness of the Mississippi River Valley alluvial aquifer

The Mississippi River Valley alluvial aquifer (MRVA) caps a shallow system of aquifers and confining units in the Mississippi Alluvial Plain (MAP) that extends across 45,000 square miles of the midwestern and southern United States from Illinois to Louisiana. Irrigation water from the MRVA is required to sustain extensive crop production, which has resulted in groundwater-level declines since the late 1920s equal to nearly half of its thickness and in reduced baseflow of streams. Increased groundwater withdrawal for irrigation is expected to continue and threatens complete and irreversible aquifer dewatering (depletion). The exact amount of dewatering in the MRVA is uncertain because its vertical extent is poorly defined and the effects of groundwater withdrawal on the aquifer are not well understood. To provide stakeholders and managers with information and tools that promote understanding of the hydrogeologic framework of the MAP extent and its role in water-resource management, the U.S. Geological Survey (USGS) Water Availability and Use Science Program has funded a 5-year effort to assess groundwater availability and project future sustainability of water resources. Part of this study involves mapping the bottom altitude and thickness of the aquifer by using compilations of hydrogeologic data and applications of geostatistical analytics. Results of this mapping effort, presented here, are intended to enhance characterization of the shallow hydrogeologic framework and direct future airborne, ground-based, and waterborne geophysical surveys. Data used in support of the findings presented in this report are available as a USGS data release ( https://doi.org/10.5066/P9D9XR5F ).

Scientific Investigations Map

Temporal trends in nitrate and selected pesticides in mid-atlantic ground water

Evaluating long-term temporal trends in regional ground-water quality is complicated by variable hydrogeologic conditions and typically slow flow, and such trends have rarely been directly measured. Ground-water samples were collected over near-decadal and annual intervals from unconfined aquifers in agricultural areas of the Mid-Atlantic region, including fractured carbonate rocks in the Great Valley, Potomac River Basin, and unconsolidated sediments on the Delmarva Peninsula. Concentrations of nitrate and selected pesticides and degradates were compared among sampling events and to apparent recharge dates. Observed temporal trends are related to changes in land use and chemical applications, and to hydrogeology and climate. Insignificant differences in nitrate concentrations in the Great Valley between 1993 and 2002 are consistent with relatively steady fertilizer application during respective recharge periods and are likely related to drought conditions in the later sampling period. Detecting trends in Great Valley ground water is complicated by long open boreholes characteristic of wells sampled in this setting which facilitate significant ground-water mixing. Decreasing atrazine and prometon concentrations, however, reflect reported changes in usage. On the Delmarva Peninsula between 1988 and 2001, median nitrate concentrations increased 2 mg per liter in aerobic ground water, reflecting increasing fertilizer applications. Correlations between selected pesticide compounds and apparent recharge date are similarly related to changing land use and chemical application. Observed trends in the two settings demonstrate the importance of considering hydrogeology and recharge date along with, changing land and chemical uses when interpreting trends in regional ground-water quality. Copyright ?? 2008 by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America. All rights reserved.

Conference Paper

Physics-guided neural networks (PGNN): An application in lake temperature modeling

This chapter introduces a framework for combining scientific knowledge of physics-based models with neural networks to advance scientific discovery. It explains termed physics-guided neural networks (PGNN), leverages the output of physics-based model simulations along with observational features in a hybrid modeling setup to generate predictions using a neural network architecture. Data science has become an indispensable tool for knowledge discovery in the era of big data, as the volume of data continues to explode in practically every research domain. Recent advances in data science such as deep learning have been immensely successful in transforming the state-of-the-art in a number of commercial and industrial applications such as natural language translation and image classification, using billions or even trillions of data samples. Accurate water temperatures are critical to understanding contemporary change, and for predicting future thermal habitat of economically valuable fish.

Book chapter

Resident research associateships, postdoctoral research awards 1989: opportunities for research at the U.S. Geological Survey, U.S. Department of the Interior

The scientists of the U.S. Geological Survey are engaged in a wide range of geologic, geophysical, geochemical, hydrologic, and cartographic programs, including the application of computer science to them. These programs offer exciting possibilities for scientific achievement and professional growth to young scientists through participation as Research Associates.

Monograph

Hydrologic monitoring and selected hydrologic and environmental studies by the U.S. Geological Survey in Georgia, 2011–2013

This compendium of papers describes results of hydrologic monitoring and hydrologic and environmental studies completed by the U.S. Geological Survey (USGS) in Georgia during 2011–2013. The USGS addresses a wide variety of water issues in the State of Georgia working with local, State, and Federal partners. As the primary Federal science agency for water resource information, the USGS monitors the quantity and quality of water in the Nation’s rivers and aquifers, assesses the sources and fate of contaminants in aquatic systems, collects and analyzes data on aquatic ecosystems, develops tools to improve the application of hydrologic information, and ensures that its information and tools are available to all potential users. During 2011–2013, the USGS continued a long-term program of monitoring stream and groundwater resources, including flow, water quality, and water use. In addition, a variety of hydrologic and environmental studies were completed to assess water availability, hydrologic hazards, and the impact of development on water resources. Information on USGS activities in Georgia is available online at http://ga.water.usgs.gov/ .

Georgia

Assessment and management of ecological integrity: Chapter 12

Assessing and understanding the impacts of human activities on aquatic ecosystems has long been a focus of ecologists, water resources managers, and fisheries scientists. While traditional fisheries management focused on single-species approaches to enhance fish stocks, there is a growing emphasis on management approaches at community and ecosystem levels. Of course, as fisheries managers shift their attention from narrow (e.g., populations) to broad organizational scales (e.g., communities or ecosystems), ecological processes and management objectives become more complex. At the community level, fisheries managers may strive for a fish assemblage that is complex, persistent, and resilient to disturbance. Aquatic ecosystem level objectives may focus on management for habitat quality and ecological processes, such as nutrient dynamics, productivity, or trophic interactions, but a long-term goal of ecosystem management may be to maintain ecological integrity. However, human users and social, economic, and political demands of fisheries management often result in a reduction of ecological integrity in managed systems, and this conflict presents a principal challenge for the modern fisheries manager. The concepts of biotic integrity and ecological integrity are being applied in fisheries science, natural resource management, and environmental legislation, but explicit definitions of these terms are elusive. Biotic integrity of an ecosystem may be defined as the capability of supporting and maintaining an integrated, adaptive community of organisms having a species composition, diversity, and functional organization comparable to that of a natural habitat of the region (Karr and Dudley 1981). Following that, ecological integrity is the summation of chemical, physical, and biological integrity. Thus, the concept of ecological integrity extends beyond fish and represents a holistic approach for ecosystem management that is especially applicable to aquatic systems. The more general term, ecological condition, refers to the state of the physical, chemical, and biological characteristics of the environment and the processes and interactions that connect them. While the concept of ecological integrity may appear unambiguous, its assessment and practice are much less clear. Ecological integrity made its debut in the USA with the Clean Water Act (CWA) of 1972 (Federal Water Pollution Control Act, as amended through Public Law 107–303, November 27, 2002), which states only one objective, “to restore and maintain the chemical, physical, and biological integrity of the Nation’s waters.” This legislation compelled resource managers to focus on chemical pollution from point effluent sources, such as industrial and municipal outflows, as well as give attention to diffuse, chronic, and watershed effects on ecological integrity. Further, the CWA allowed pursuit of restoration programs in degraded water bodies and catalyzed the science and practice of restoration ecology. The term ecosystem health is often raised in discussions of ecological integrity. Perhaps it is natural to anthropomorphize our concern for personal health to ecosystems, so it becomes a useful metaphor for understanding the concept of ecological integrity. However, whether or not an ecosystem should be considered an entity, such as a superorganism, is a debate without end that began with early ecologists and continues today (Clements 1916; Suter 1993; Simon 1999a). Regardless, the ecosystem is indeed a natural unit with a level of organization and properties beyond the collection of those species that occupy it and presents the most appropriate spatial and organizational scale in which to assess and study ecological integrity. Streams and rivers serve as integrators of chemical, physical, and biological conditions across the landscape, and while the theory and practice associated with ecological integrity of aquatic systems is easily applied to flowing waters and is emphasized in this chapter, they are broadly applicable among all aquatic systems.

Book chapter

Helping solve Georgia's water problems - the USGS Cooperative Water Program

The U.S. Geological Survey (USGS) addresses a wide variety of water issues in the State of Georgia through the Cooperative Water Program (CWP). As the primary Federal science agency for water-resource information, the USGS monitors the quantity and quality of water in the Nation's rivers and aquifers, assesses the sources and fate of contaminants in aquatic systems, collects and analyzes data on aquatic ecosystems, develops tools to improve the application of hydrologic information, and ensures that its information and tools are available to all potential users. This broad, diverse mission cannot be accomplished effectively without the contributions of the CWP.

Georgia