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Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

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At least 109 records · Page 6Linked to original sources
USGS2003

Simulation of ground-water/surface-water flow in the Santa Clara-Calleguas ground-water basin, Ventura County, California

Ground water is the main source of water in the Santa Clara-Calleguas ground-water basin that covers about 310 square miles in Ventura County, California. A steady increase in the demand for surface- and ground-water resources since the late 1800s has resulted in streamflow depletion and ground-water overdraft. This steady increase in water use has resulted in seawater intrusion, inter-aquifer flow, land subsidence, and ground-water contamination. The Santa Clara-Calleguas Basin consists of multiple aquifers that are grouped into upper- and lower-aquifer systems. The upper-aquifer system includes the Shallow, Oxnard, and Mugu aquifers. The lower-aquifer system includes the upper and lower Hueneme, Fox Canyon, and Grimes Canyon aquifers. The layered aquifer systems are each bounded below by regional unconformities that are overlain by extensive basal coarse-grained layers that are the major pathways for ground-water production from wells and related seawater intrusion. The aquifer systems are bounded below and along mountain fronts by consolidated bedrock that forms a relatively impermeable boundary to ground-water flow. Numerous faults act as additional exterior and interior boundaries to ground-water flow. The aquifer systems extend offshore where they crop out along the edge of the submarine shelf and within the coastal submarine canyons. Submarine canyons have dissected these regional aquifers, providing a hydraulic connection to the ocean through the submarine outcrops of the aquifer systems. Coastal landward flow (seawater intrusion) occurs within both the upper- and lower-aquifer systems. A numerical ground-water flow model of the Santa Clara-Calleguas Basin was developed by the U.S. Geological Survey to better define the geohydrologic framework of the regional ground-water flow system and to help analyze the major problems affecting water-resources management of a typical coastal aquifer system. Construction of the Santa Clara-Calleguas Basin model required the compilation of geographic, geologic, and hydrologic data and estimation of hydraulic properties and flows. The model was calibrated to historical surface-water and ground-water flow for the period 1891-1993. Sources of water to the regional ground-water flow system are natural and artificial recharge, coastal landward flow from the ocean (seawater intrusion), storage in the coarse-grained beds, and water from compaction of fine-grained beds (aquitards). Inflows used in the regional flow model simulation include streamflows routed through the major rivers and tributaries; infiltration of mountain-front runoff and infiltration of precipitation on bedrock outcrops and on valley floors; and artificial ground-water recharge of diverted streamflow, irrigation return flow, and treated sewage effluent. Most natural recharge occurs through infiltration (losses) of streamflow within the major rivers and tributaries and the numerous arroyos that drain the mountain fronts of the basin. Total simulated natural recharge was about 114,100 acre-feet per year (acre-ft/yr) for 1984-93: 27,800 acre-ft/yr of mountain-front and bedrock recharge, 24,100 acre-ft/yr of valley-floor recharge, and 62,200 acre-ft/yr of net streamflow recharge. Artificial recharge (spreading of diverted streamflow, irrigation return, and sewage effluent) is a major source of ground-water replenishment. During the 1984-93 simulation period, the average rate of artificial recharge at the spreading grounds was about 54,400 acre-ft/yr, 13 percent less than the simulated natural recharge rate for streamflow infiltration within the major rivers and tributaries. Estimated recharge from infiltration of irrigation return flow on the valley floors averaged about 51,000 acre-ft/yr, and treated sewage effluent averaged about 9,000 acre-ft/yr. Artificial recharge as streamflow diversion to the spreading grounds has occurred since 1929, and treated-sewage effluent has been discharged to stream channels since 1930. Under

Water-Resources Investigations Report↗
USGS2022

Phenological variation in spring migration timing of adult alewife (Alosa pseudoharengus) in coastal Massachusetts

The timing of biological events in plants and animals, such as migration and reproduction, is shifting due to climate change. Anadromous fishes are particularly susceptible to these shifts as they are subject to strong seasonal cycles when transitioning between marine and freshwater habitats to spawn. We used linear models to determine the extent of phenological shifts in adult Alewife Alosa pseudoharengus as they migrated from ocean to freshwater environments during spring to spawn at 12 sites along the northeastern USA. We also evaluated broadscale oceanic and atmospheric drivers that trigger their movements from offshore to inland habitats, including sea surface temperature, North Atlantic Oscillation index, and Gulf Stream index. Run timing metrics of initiation, median (an indicator of peak run timing), end, and duration were found to vary among sites. Although most sites showed negligible shifts towards earlier timing, statistically significant changes were detected in three systems. Overall, winter sea surface temperature, spring and fall transition dates, and annual run size were the strongest predictors of run initiation and median dates, while a combination of within-season and seasonal-lag effects influenced run end and duration timing. Disparate results observed across the 12 spawning runs suggest that regional environmental processes were not consistent drivers of phenology and local environmental and ecological conditions may be more important. Additional years of data to extend time series and monitoring of Alewife timing and movements in nearshore habitats may provide important information about staging behaviors just before adults transition between ocean and freshwater habitats.

Massachusetts↗
USGS2011

Genetic discontinuity among regional populations of Lophelia perfusa in the North Atlantic Ocean

Knowledge of the degree to which populations are connected through larval dispersal is imperative to effective management, yet little is known about larval dispersal ability or population connectivity in Lophelia pertusa, the dominant framework-forming coral on the continental slope in the North Atlantic Ocean. Using nine microsatellite DNA markers, we assessed the spatial scale and pattern of genetic connectivity across a large portion of the range of L. pertusa in the North Atlantic Ocean. A Bayesian modeling approach found four distinct genetic groupings corresponding to ocean regions: Gulf of Mexico, coastal southeastern U.S., New England Seamounts, and eastern North Atlantic Ocean. An isolation-by-distance pattern was supported across the study area. Estimates of pairwise population differentiation were greatest with the deepest populations, the New England Seamounts (average FST = 0.156). Differentiation was intermediate with the eastern North Atlantic populations (FST = 0.085), and smallest between southeastern U.S. and Gulf of Mexico populations (FST = 0.019), with evidence of admixture off the southeastern Florida peninsula. Connectivity across larger geographic distances within regions suggests that some larvae are broadly dispersed. Heterozygote deficiencies were detected within the majority of localities suggesting deviation from random mating. Gene flow between ocean regions appears restricted, thus, the most effective management scheme for L. pertusa involves regional reserve networks

Conservation Genetics↗
USGS2018

Hawai‘i and U.S.-Affiliated Pacific Islands

The U.S. Pacific Islands are culturally and environmentally diverse, treasured by the 1.9 million people who call them home. Pacific islands are particularly vulnerable to climate change impacts due to their exposure and isolation, small size, low elevation (in the case of atolls), and concentration of infrastructure and economy along the coasts. A prevalent cause of year-to-year changes in climate patterns around the globe and in the Pacific Islands region is the El Niño –Southern Oscillation (ENSO). The El Niño and La Niña phases of ENSO can dramatically affect precipitation, air and ocean temperature, sea surface height, storminess, wave size, and trade winds. It is unknown exactly how the timing and intensity of ENSO will continue to change in the coming decades, but recent climate model results suggest a doubling in frequency of both El Niño and La Niña extremes in this century as compared to the 20th century under scenarios with more warming, including the higher scenario (RCP8.5). On islands, all natural sources of freshwater come from rainfall received within their limited land areas. Severe droughts are common, making water shortage one of the most important climate-related risks in the region. As temperature continues to rise and cloud cover decreases in some areas, evaporation is expected to increase, causing both reduced water supply and higher water demand. Streamflow in Hawai‘i has declined over approximately the past 100 years, consistent with observed decreases in rainfall. The impacts of sea level rise in the Pacific include coastal erosion, episodic flooding, permanent inundation, heightened exposure to marine hazards, and saltwater intrusion to surface water and groundwater systems. Sea level rise will disproportionately affect the tropical Pacific and potentially exceed the global average. Invasive species , landscape change, habitat alteration, and reduced resilience have resulted in extinctions and diminished ecosystem function. Inundation of atolls in the coming decades is projected to impact existing on-island ecosystems. Wildlife that relies on coastal habitats will likely also be severely impacted. In Hawaiʻi, coral reefs contribute an estimated $477 million to the local economy every year. Under projected warming of approximately 0.5°F per decade, all nearshore coral reefs in the Hawai‘i and Pacific Islands region will experience annual bleaching before 2050. An ecosystem -based approach to international management of open ocean fisheries in the Pacific that incorporates climate-informed catch limits is expected to produce more realistic future harvest levels and enhance ecosystem resilience. Indigenous communities of the Pacific derive their sense of identity from the islands. Emerging issues for Indigenous communities of the Pacific include the resilience of marine-managed areas and climate-induced human migration from their traditional lands. The rich body of traditional knowledge is place-based and localized and is useful in adaptation planning because it builds on intergenerational sharing of observations. Documenting the kinds of governance structures or decision-making hierarchies created for management of these lands and waters is also important as a learning tool that can be shared with other island communities. Across the region, groups are coming together to minimize damage and disruption from coastal flooding and inundation as well as other climate-related impacts. Social cohesion is already strong in many communities, making it possible to work together to take action. Early intervention can lower economic, environmental, social, and cultural costs and reduce or prevent conflict and displacement from ancestral land and resources.

Report↗
USGS2012

Bathymetry and acoustic backscatter-outer mainland shelf, eastern Santa Barbara Channel, California

In 2010 and 2011, scientists from the U.S. Geological Survey (USGS), Pacific Coastal and Marine Science Center (PCMSC), acquired bathymetry and acoustic-backscatter data from the outer shelf region of the eastern Santa Barbara Channel, California. These surveys were conducted in cooperation with the Bureau of Ocean Energy Management (BOEM). BOEM is interested in maps of hard-bottom substrates, particularly natural outcrops that support reef communities in areas near oil and gas extraction activity. The surveys were conducted using the USGS R/V Parke Snavely, outfitted with an interferometric sidescan sonar for swath mapping and real-time kinematic navigation equipment. This report provides the bathymetry and backscatter data acquired during these surveys in several formats, a summary of the mapping mission, maps of bathymetry and backscatter, and Federal Geographic Data Committee (FGDC) metadata.

California↗
USGS2006

Continuous resistivity profiling to delineate submarine groundwater discharge - Examples and limitations

Aquifer-ocean interaction, saline intrusion, and submarine groundwater discharge (SGD) are emerging topics in hydrology and oceanography with important implications for water-resource management and estuarine ecology. Although the threat of saltwater intrusion has long been recognized in coastal areas, SGD has, until recently, received much less attention. It is clear that SGD constitutes a major nutrient flux to coastal waters, with implications for estuarine ecology, eutrophication, and loss of coral reefs; however, fundamental questions regarding SGD remain unanswered: What are the spatial and temporal distributions of SGD offshore? How do seasonal and storm-related variations in aquifer recharge affect SGD flux and nutrient loading? What controls do aquifer structure and heterogeneity impose? How are SGD and saline recirculation related? Geophysical methods can provide insights to help answer these questions and improve the understanding of this intriguing and environmentally relevant hydrologic phenomenon.

Leading Edge (Tulsa, OK)↗
USGS2007

Survey report of NOAA Ship McArthur II cruises AR-04-04, AR-05-05 and AR-06-03: habitat classification of side scan sonar imagery in support of deep-sea coral/sponge explorations at the Olympic Coast National Marine Sanctuary

Habitat mapping and characterization has been defined as a high-priority management issue for the Olympic Coast National Marine Sanctuary (OCNMS), especially for poorly known deep-sea habitats that may be sensitive to anthropogenic disturbance. As a result, a team of scientists from OCNMS, National Centers for Coastal Ocean Science (NCCOS), and other partnering institutions initiated a series of surveys to assess the distribution of deep-sea coral/sponge assemblages within the sanctuary and to look for evidence of potential anthropogenic impacts in these critical habitats. Initial results indicated that remotely delineating areas of hard bottom substrate through acoustic sensing could be a useful tool to increase the efficiency and success of subsequent ROV-based surveys of the associated deep-sea fauna. Accordingly, side scan sonar surveys were conducted in May 2004, June 2005, and April 2006 aboard the NOAA Ship McArthur II to: (1) obtain additional imagery of the seafloor for broader habitat-mapping coverage of sanctuary waters, and (2) help delineate suitable deep-sea coral-sponge habitat, in areas of both high and low commercial-fishing activities, to serve as sites for surveying-in more detail using an ROV on subsequent cruises, Several regions of the sea floor throughout the OCNMS were surveyed and mosaicked at 1-meter pixel resolution. Imagery from the side scan sonar mapping efforts was integrated with other complementary data from a towed camera sled, ROVs, sedentary samples, and bathymetry records to describe geological and biological (where possible) aspects of habitat. Using a hierarchical deep-water marine benthic classification scheme (Greene et al. 1999), we created a preliminary map of various habitat polygon features for use in a geographical information system (GIS). This report provides a description of the mapping and groundtruthing efforts as well as results of the image classification procedure for each of the areas surveyed.

Washington↗
USGS2022

Long-term apparent survival of a cold-stunned subpopulation of juveniles green turtles

Understanding the effects of extreme weather on animal populations is fundamental to ecological and conservation sciences and species management. Climate change has resulted in both warm and cold temperature extremes, including an increased frequency of severe cold snaps at middle latitudes in North America. These unusually cold air masses cause rapid declines in nearshore ocean temperatures in coastal areas, with detrimental effects on marine organisms. Acute cold-stun events (hereafter cold stuns) occur when hundreds to thousands of resident juvenile sea turtles fail to escape shallow water during cold snaps. Human intervention through rescue and recovery largely mitigates direct juvenile sea turtle mortality, but delayed effects of cold stuns on rescued individuals are not well understood. Our objective was to examine long-term juvenile green turtle ( Chelonia mydas ) survival across four cold stuns of varying severity in St. Joseph Bay, Florida, between 2010 and 2018. We used the classic Cormack–Jolly–Seber model in a hierarchical Bayesian framework to estimate apparent survival (i.e., emigration and mortality) of rescued turtles at different time intervals. Our results indicated about half of a cohort rescued during a severe cold stun in January 2010 likely remained in the population 1 year later, with 10%–20% remaining 4 years later, and as few as 5% by 2018. The results also suggested higher apparent survival for cohorts rescued during two subsequent milder cold stuns. Emigration was a more plausible ecological explanation for low apparent survival than delayed mortality. Potential ecological mechanisms underlying emigration include a reduction in food availability and a behavioral response to either the severe weather event or handling during rescue (or both). However, the typical annual turnover of juvenile green turtles, though assumed low, is not well known in St. Joseph Bay. Thus, our apparent survival estimates may be reflective of higher-than-expected emigration in the broader population. Our study provides important baseline information about long-term juvenile sea turtle survival after cold stuns in temperate regions. We also highlight the importance of strategic monitoring between cold stuns to examine additional ecological questions.

Florida↗
USGS2012

Storm surge modeling and applications in coastal areas

This chapter introduces the reader to a wide spectrum of storm surge modeling systems used to assess the impact of tropical cyclones, covering a range of numerical methods, model domains, forcing and boundary conditions, and purposes. New technologies to obtain data such as deployment of temporary sensors and remote sensing practices to support modeling are also presented. Extensive storm surge modeling applications have been made with existing modeling systems and some of them are described in this chapter. The authors recognize the importance of evaluating river-ocean interactions in coastal environments during tropical cyclones. Therefore, the coupling of hydraulic (riverine) and storm surge models is discussed. In addition, results from studies performed in the coast of India are shown which generated maps to help emergency managers and reduce risk due to coastal inundation.

Book chapter↗
USGS2022

Characteristics of day-roosts used by the Northern Long-eared Bat (Myotis septentrionalis) in coastal New York

In North America, Myotis septentrionalis (Northern Long-eared Bat) has experienced precipitous declines from white-nose syndrome. As these bats become rare and difficult to capture, additional day-roost assessments to inform management may fill gaps in our understanding, particularly in habitats and regions where such roosts have never been surveyed. Over 2 summers, we radio-tracked 16 individuals from a maternity colony on Long Island, NY, in a small forested patch surrounded by development and ocean. These bats disproportionately selected small, suppressed Robinia pseudoacacia (Black Locust) trees or snags for roosting. Generally, roosts occurred within the interior or edges of this forest patch, rather than surrounding suburbia, reinforcing the hypothesis that Northern Long-eared Bats are forest adapted. Our study shows even small tracts of forest in coastal, urban areas may have conservation value in providing day-roost and foraging habitat.

New York↗
USGS2008

Submarine ground-water discharge and fate along the coast of Kaloko-Honokohau National Historical Park, Island of Hawai'i: Part 2, spatial and temporal variations in salinity, radium-isotope activity, and nutrient concentrations in coastal waters, December 2003 - April 2006

The aquatic resources of Kaloko-Honokohau National Historical Park, including rocky shoreline, fishponds, and anchialine pools, provide habitat to numerous plant and animal species and offer recreational opportunities to local residents and tourists. A considerable amount of submarine groundwater discharge was known to occur in the park, and this discharge was suspected to influence the park's water quality. Thus, the goal of this study was to characterize spatial and temporal variations in the quality and quantity of groundwater discharge in the park. Samples were collected in December 2003, November 2005, and April 2006 from the coastal ocean, beach pits, three park observation wells, anchialine pools, fishponds, and Honokohau Harbor. The activities of two Ra isotopes commonly used as natural ground-water tracers (223Ra and 224Ra), salinity, and nutrient concentrations were measured. Fresh ground water composed a significant proportion (8-47 volume percent) of coastal-ocean water. This percentage varied widely between study sites, indicating significant spatial variation in submarine groundwater discharge at small (meter to kilometer) scales. Nitrate + nitrite, phosphate, and silica concentrations were significantly higher in nearshore coastal-ocean samples relative to samples collected 1 km or more offshore, and linear regression showed that most of this difference was due to fresh ground-water discharge. High-Ra-isotope-activity, higher-salinity springs were a secondary source of nutrients, particularly phosphate, at Honokohau Harbor and Aiopio Fishtrap. Salinity, Ra-isotope activity, and nutrient concentrations appeared to vary in response to the daily tidal cycle, although little seasonal variation was observed, indicating that submarine ground-water discharge may buffer the park's water quality against the severe seasonal changes that would occur in a system where freshwater inputs were dominated by rivers and runoff. Ra-isotope-activity ratios indicated that the residence time of water in the coastal ocean at the study sites was less than 1.6 days. We calculated water and nutrient fluxes into the coastal ocean at each study site. This study provides a baseline description of submarine ground-water discharge in Kaloko-Honokohau National Historical Park and its effect on the park's aquatic resources. We hope that it will allow park managers to better assess potential future changes in ground-water quality and quantity and conserve the park's valuable resources.

Hawaii↗
USGS2015

Analysis of storm-tide impacts from Hurricane Sandy in New York

The hybrid cyclone-nor’easter known as Hurricane Sandy affected the mid-Atlantic and northeastern United States during October 28-30, 2012, causing extensive coastal flooding. Prior to storm landfall, the U.S. Geological Survey (USGS) deployed a temporary monitoring network from Virginia to Maine to record the storm tide and coastal flooding generated by Hurricane Sandy. This sensor network augmented USGS and National Oceanic and Atmospheric Administration (NOAA) networks of permanent monitoring sites that also documented storm surge. Continuous data from these networks were supplemented by an extensive post-storm high-water-mark (HWM) flagging and surveying campaign. The sensor deployment and HWM campaign were conducted under a directed mission assignment by the Federal Emergency Management Agency (FEMA). The need for hydrologic interpretation of monitoring data to assist in flood-damage analysis and future flood mitigation prompted the current analysis of Hurricane Sandy by the USGS under this FEMA mission assignment. The analysis of storm-tide impacts focused on three distinct but related aspects of coastal flooding from Hurricane Sandy, including flooding inland along the tidal reach of the Hudson River. These aspects are (1) comparisons of peak storm-tide elevations to those of historical storms and to annual exceedance probabilities, (2) assessments of storm-surge characteristics, and (3) comparisons of maps of inundation extent that were derived from differing amounts of available storm-tide data. Most peak storm-tide elevations from Hurricane Sandy were greater than about 9.5 feet (ft) above North American Vertical Datum of 1988. Peak storm-tide elevations from Hurricane Sandy were compared with data for the intense nor’easter of December 11–13, 1992, and Hurricane Irene (August 27–28, 2011), which weakened to a tropical storm before arriving in New York. Peak storm-tide elevations from Hurricane Sandy were higher than those from the December 1992 nor’easter at 24 of 27 sites; most differences were greater than about 0.7 ft or 9 percent (above the historical storm tide). Peak storm-tide elevations from Hurricane Sandy were higher than those from Tropical Storm Irene at all sites; most differences were greater than about 2.5 ft or 48 percent. Data from permanent and temporary monitoring sites and HWM sites were compared with corresponding FEMA flood elevations for the 10-, 2-, 1-, and 0.2-percent annual exceedance probabilities in New York. Peak storm-tide elevations from Hurricane Sandy had annual exceedance probabilities less than or equal to 1 percent and (or) greater than 0.2 percent at a plurality of sites—184 of 413. Peak storm-tide elevations greater than or equal to the 0.2-percent flood elevation accounted for 81 of 413 sites. Peak storm-tide elevations less than the 10-percent flood elevation accounted for only 10 of 413 sites. Data from selected permanent monitoring sites in the USGS and NOAA networks were used to assess storm-surge magnitude associated with the peak storm tide, and magnitude and timing of the peak storm surge. Most magnitudes of the peak storm surge were greater than about 8.3 ft, and most magnitudes of the storm surge component of the peak storm tide were greater than about 7.8 ft. Timing of peak storm surge arrival with respect to local phase of tide controlled where the most extreme peak storm-tide levels and coastal flooding occurred. This finding has bearing not only for locations impacted by the highest storm tides from Hurricane Sandy, but also for those that had the greatest storm surges yet were spared the worst flooding because of fortuitous timing during this storm. Results of FEMA Hazus Program (HAZUS) flood loss analyses performed for New York counties were compared for extents of storm-tide inundation from Hurricane Sandy mapped (1) pre-storm, (2) on November 11, 2012, and (3) on February 14, 2013. The resulting depictions of estimated total building stock losses document how differing amounts of available USGS data affect the resolution and accuracy of storm-tide inundation extents. Using the most accurate results from the final (February 14, 2013) inundation extent, estimated losses range from $380 million to $5.9 billion for individual New York counties; total estimated aggregate losses are about $23 billion for all New York counties. Quality of the inundation extents used in HAZUS analyses has a substantial effect on final results. These findings can be used to inform future post-storm reconstruction planning and estimation of insurance claims.

New York↗
USGS2011

Terrestrial forest management plan for Palmyra Atoll

This 'Terrestrial Forest Management Plan for Palmyra Atoll' was developed by the U.S. Geological Survey (USGS) for The Nature Conservancy (TNC) Palmyra Program to refine and expand goals and objectives developed through the Conservation Action Plan process. It is one in a series of adaptive management plans designed to achieve TNC's mission toward the protection and enhancement of native wildlife and habitat. The 'Terrestrial Forest Management Plan for Palmyra Atoll' focuses on ecosystem integrity and specifically identifies and addresses issues related to assessing the status and distribution of resources, as well as the pressures acting upon them, most specifically nonnative and potentially invasive species. The plan, which presents strategies for increasing ecosystem integrity, provides a framework to implement and track the progress of conservation and restoration goals related to terrestrial resources on Palmyra Atoll. The report in its present form is intended to be an overview of what is known about historical and current forest resources; it is not an exhaustive review of all available literature relevant to forest management but an attempt to assemble as much information specific to Palmyra Atoll as possible. Palmyra Atoll is one of the Northern Line Islands in the Pacific Ocean southwest of the Hawai`ian Islands. It consists of many heavily vegetated islets arranged in a horseshoe pattern around four lagoons and surrounded by a coral reef. The terrestrial ecosystem consists of three primary native vegetation types: Pisonia grandis forest, coastal strand forest, and grassland. Among these vegetation types, the health and extent of Pisonia grandis forest is of particular concern. Overall, the three vegetation types support 25 native plant species (two of which may be extirpated), 14 species of sea birds, six shore birds, at least one native reptile, at least seven native insects, and six native land crabs. Green and hawksbill turtles forage at Palmyra Atoll, and though rarely documented, beach nesting could be affected by terrestrial management actions. There are various nonnative or invasive species throughout the terrestrial ecosystem. The most notable examples of terrestrial invasive species include coconut palms (Cocos nucifera) and black rats (Rattus rattus). Although it is unclear whether they are nonnative, coconut palms are currently the most dominant plant across Palmyra Atoll. They compete with native plant species for space and resources and are potentially detrimental to sea birds dependent on native vegetation for roosting and nesting habitat. This competition in turn impacts nutrient resource availability, thereby reshaping energy flow in the ecosystem. Black rats are known to prey on ground-nesting sea birds and are likely responsible for the lack of burrowing sea bird reproduction at Palmyra Atoll. In addition, they may be facilitating the invasion of other nonnative species and negatively impacting other native fauna. Although the extent and impacts of these and other nonnative and (or) invasive species are not fully understood, the extent and impacts are clearly a threat to the native species and one of the most urgent threats to the overall ecosystem integrity of Palmyra Atoll. This 'Terrestrial Forest Management Plan for Palmyra Atoll' addresses issues related to invasive species and other problems. Priority goals are established as are associated objectives and strategies. The overarching goal is to perpetuate and where possible restore terrestrial ecosystem integrity through the following techniques: 1. Habitat management: Maintain and enhance habitat to the extent possible to sustain thriving Pisonia grandis forest, coastal strand forest, endemic grassland, self-sustaining populations of sea birds, shore birds, coconut crabs, native lizards, and native insects. 2. Monitoring and assessment: Acquire information on distribution and abundance as needed for conservation of each resour

Open-File Report↗
USGS2007

Geophysical mapping of oyster habitats in a shallow estuary: Apalachicola Bay, Florida

This report presents high-resolution geophysical data, interpretive maps, and a preliminary discussion about the oyster habitat and estuary-floor geology within Apalachicola Bay, Florida (fig. 1). During two research cruises, conducted in 2005 and 2006, approximately 230 km² of the bay floor were surveyed using interferometric-bathymetry, sidescan-sonar, and chirp seismic-reflection techniques. The research was conducted as part of a cooperative program between the U.S. Geological Survey (USGS), the National Oceanic and Atmospheric Administration Coastal Services Center (CSC), and the Apalachicola Bay National Estuarine Research Reserve. The Apalachicola Bay National Estuarine Research Reserve was established in 1979 to provide opportunities for long-term monitoring and research to provide a basis for more informed coastal management decisions for this estuary. Apalachicola Bay is the largest oyster fishery in Florida (Whitfield and Beaumariage, 1977), and the primary objective of this program is to develop a suite of maps that define oyster habitat distribution and estuary-floor geology within the bay. The resulting maps will assist in effective management of oyster resources and provide a reference geologic framework for future scientific and applied research.

Florida↗
USGS2010

Coral calcification in a changing ocean

Animals and plants that live in the ocean form skeletons and other hard parts by combining calcium ions and carbonate ions to create calcium carbonate. This process is called calcification. In tropical and subtropical oceans, the calcification of corals and other organisms creates reefs that protect islands, produce beautiful white-sand beaches, and create habitat for thousands of species that live on coral reefs. Many reefs around the globe are declining in health. Live, reef-building corals are becoming scarcer, often being replaced by fleshy algae (seaweeds) that do not build reefs. Many factors contribute to reef decline, but scientific consensus is that coral bleaching, coral disease, overfishing, and coastal development are largely to blame. It is the role of the U.S. Geological Survey (USGS) to provide science that informs the decision-making process of those who are tasked with managing reef resources under U.S. jurisdiction. One of the goals of the Coral Reef Ecosystem Studies (CREST) project is to examine how calcification rates in reef-building corals and encrusting coralline algae are changing in response to changes in the ocean environment.

Fact Sheet↗
USGS2006

Coastal monitoring of the May 2005 dredge disposal offshore of Ocean Beach, San Francisco, Calif.

Ocean Beach, California, contains an erosion hot spot in the shadow of the San Francisco ebb tidal delta south of Sloat Boulevard that threatens valuable public infrastructure as well as the safe recreational use of the beach. In an effort to reduce the erosion at this location and avoid hazardous navigation conditions at the current disposal site (SF-8), a new plan for the management of sediment dredged annually from the main shipping channel at the mouth of Francisco Bay was implemented in May 2005 by the United States Army Corps of Engineers, San Francisco District (COE). The objective for COE was to perform a test dredge disposal of ~230,000 m 3 (300,000 yd 3 ) of sand just offshore of the erosion hot spot, in depths between approximately 9 and 14 m. This disposal site was chosen because it is in a location where the strong tidal currents associated with the mouth of San Francisco Bay and waves can potentially feed sediment toward the littoral zone in the reach of the beach that is experiencing critical erosion. The onshore migration of sediment from the target disposal location might feed the primary longshore bar or the nearshore zone, and provide a buffer to erosion that peaks during winter months when large waves impact the region. The U.S. Geological Survey (USGS), in collaboration with the Sea Floor Mapping Lab (SFML) of California State University, Monterey Bay, monitored the initial bathymetric evolution of the test dredge disposal site and the adjacent coastal region from May 2005 to November 2005. This paper reports on this monitoring effort and assesses the short-term coastal response.

California↗
USGS2026

A new inventory and conservation assessment of United States islands

To support conservation-focused research and management we developed a new 30-m resolution polygon data layer of the nonlacustrine and nonriverine islands of the United States, with associated attributes describing key physical and conservation geography characteristics. Islands were grouped into a three-tiered hierarchy of island regions (twelve), island provinces (twenty-eight), and individual islands (19,023). Islands were classified as either continental or oceanic based on their physiographic position relative to the North America continental shelf, and estuarine versus nonestuarine depending on their location within or external to estuaries. For each island we assessed the diversity of terrestrial and coastal ecosystems, the number of threatened and endangered (T&E) species listed under the Endangered Species Act, the number of T&E species critical habitats, the number of migratory bird species listed under the Migratory Bird Treaty Act, the number of Key Biodiversity Areas, and the number of and management responsibility for protected areas. We conclude that the conservation importance of islands is disproportionate to their total area as, for example, islands contain 52 percent of the T&E species yet their total area is only 2 percent of the area of the continental mainland. Similarly, of the global total of 431 World Terrestrial Ecosystems, 201 (47 percent) occur on U.S. islands compared with 286 (66 percent) that occur on the U.S. continental mainland.

Annals of the American Association of Geographers↗
USGS2024

Evaluation and refinement of chlorophyll-a algorithms for high-biomass blooms in San Francisco Bay (USA)

A massive bloom of the raphidophyte Heterosigma akashiwo occurred in summer 2022 in San Francisco Bay, causing widespread ecological impacts including events of low dissolved oxygen and mass fish kills. The rapidly evolving bloom required equally rapid management response, leading to the use of near-real-time image analysis of chlorophyll from the Ocean and Land Colour Instrument (OLCI) aboard Sentinel-3. Standard algorithms failed to adequately capture the bloom, signifying a need to refine a two-band algorithm developed for coastal and inland waters that relates the red-edge part of the remote sensing reflectance spectrum to chlorophyll. While the bloom was the initial motivation for optimizing this algorithm, an extensive dataset of in-water validation measurements from both bloom and non-bloom periods was used to evaluate performance over a range of concentrations and community composition. The modified red-edge algorithm with a simplified atmospheric correction scheme outperformed existing standard products across diverse conditions, and given the modest computational requirements, was found suitable for operational use and near-real-time product generation. The final version of the algorithm successfully minimizes error for non-bloom periods when chlorophyll a is typically <30 mg m −3 , while also capturing bloom periods of >100 mg m −3 chlorophyll a .

California↗