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Book review: Handbook of cyanobacterial monitoring and cyanotoxin analysis

Review of Meriluoto, Jussi, Lisa Spoof, and GeoffreyA. Codd [eds.]. 2017. Handbook of Cyanobacterial Monitoring and Cyanotoxin Analysis. John Wiley & Sons, Ltd.: Chichester, West Sussex, UK, ISBN 978‐1‐119‐06868‐6 (978‐1‐119‐06876‐1 eBook), DOI 10.1002/9781119068761.

Limnology and Oceanography Bulletin

The AEMON-J “Hacking Limnology” workshop series & virtual summit: Incorporating data science and open science in aquatic research

Following the 2020 “Virtual Summit: Incorporating Data Science and Open Science in Aquatic Research” (DSOS; Meyer and Zwart 2020 ), a grassroots group of scientists convened the 2nd Virtual DSOS Summit on 22–23 July 2021. DSOS combined forces with the Aquatic Ecosystem MOdeling Network - Junior (AEMON-J; https://github.com/aemon-j) to host a 4-d “Hacking Limnology” Workshop Series prior to the summit (13–16 July 2021). The aim was to focus more deeply on skill development and networking among early career researchers (ECRs), both of which are key to growing a workforce of data-intensive aquatic scientists (López Moreira M et al. in press; Meyer et al. 2021 a ). To support ECRs further, we hosted a virtual job board, where participants could note if they were either looking for employment or hiring for a position. Like the 2020 summit, there was high enthusiasm for both the summit and the workshops. In total, 686 people from over 50 countries registered for the AEMON-J Workshop Series and the DSOS Summit. Countries with the highest number of registrants included the United States (41%), Nigeria (20%), Canada (6%), Brazil (6%), and Germany (5%) (Fig. 1). To increase accessibility, there were no registration costs for the workshops and summit, and we centralized introductory training materials, coding scripts, and presentation recordings in one community website (https://aquaticdatasciopensci.github.io/; Fig. 2), which we hope will continue to support the AEMON-J and DSOS communities over time.

Limnology and Oceanography Bulletin

The Grand Caddis hatch of JASM 2022: Trichoptera natural history observations at the Joint Aquatic Sciences Meeting in Grand Rapids, Michigan (USA)

In a stroke of good luck for aquatic scientists and insect enthusiasts, the May 2022 Joint Aquatic Sciences Meeting (JASM) in Grand Rapids, Michigan coincided with a spectacular hatch of hydropsychid caddisflies. To estimate density, we enumerated caddisflies on 12 polarized window panels on the western face of the DeVos Place, which faced the Grand River. We found an average of 57.8 caddisflies per 2.0 × 2.3 m window panel (density of 12.6 caddisflies m −2 ). We observed American robins, swallows, sparrows, and jumping spiders preying and scavenging during the hatch. We also describe here our observations of a novel precopulatory behavior in the species Hydropsyche morosa , which we describe as a “head-to-tail” position. We discuss our natural history observations and share thoughts on how conferences can be a springboard for networking and collaborative science, natural history-focused or otherwise.

Michigan

Peer review by and for non-native English speakers: Interacting across international limnology societies

Scholarly peer review is critical to the scientific process, yet there are limited resources available for students, postdocs, and other early career researchers (ECRs) to learn how to perform effective and time-efficient review. The ASLO Raelyn Cole Editorial Fellows have developed several peer review training resources, including a webinar ( https://www.youtube.com/watch?v=utntl1VGy5g ), editorial (Gradoville and Deemer 2022 ), and review (Falkenberg and Soranno 2018 ). One key issue identified in our webinar is that English language issues present significant challenges, both for authors and for reviewers. Indeed, the use of English as the primary language of science is a source of inequity (Ramírez-Castañeda 2020 ) that can lead to disadvantages for English as a second language (ESL) authors and reviewers.

Bulletin Limnology and Oceanography

Climate-induced warming of lakes can be either amplified or suppressed by trends in water clarity

Climate change is rapidly warming aquatic ecosystems including lakes and reservoirs. However, variability in lake characteristics can modulate how lakes respond to climate. Water clarity is especially important both because it influences the depth range over which heat is absorbed, and because it is changing in many lakes. Here, we show that simulated long-term water clarity trends influence how both surface and bottom water temperatures of lakes and reservoirs respond to climate change. Clarity changes can either amplify or suppress climate-induced warming, depending on lake depth and the direction of clarity change. Using a process-based model to simulate 1894 north temperate lakes from 1979 to 2012, we show that a scenario of decreasing clarity at a conservative yet widely observed rate of 0.92% yr −1 warmed surface waters and cooled bottom waters at rates comparable in magnitude to climate-induced warming. For lakes deeper than 6.5 m, decreasing clarity was sufficient to fully offset the effects of climate-induced warming on median whole-lake mean temperatures. Conversely, a scenario increasing clarity at the same rate cooled surface waters and warmed bottom waters relative to baseline warming rates. Furthermore, in 43% of lakes, increasing clarity more than doubled baseline bottom temperature warming rates. Long-term empirical observations of water temperature in lakes with and without clarity trends support these simulation results. Together, these results demonstrate that water clarity trends may be as important as rising air temperatures in determining how waterbodies respond to climate change.

Limnology and Oceanography Letters

Ice duration drives winter nitrate accumulation in north temperate lakes

The duration of winter ice cover on lakes varies substantially with climate variability, and has decreased over the last several decades in many temperate lakes. However, little is known of how changes in seasonal ice cover may affect biogeochemical processes under ice. We examined winter nitrogen (N) dynamics under ice using a 30+ yr dataset from five oligotrophic/mesotrophic north temperate lakes to determine how changes in inorganic N species varied with ice duration. Nitrate accumulated during winter and was strongly related to the number of days since ice-on. Exogenous inputs accounted for less than 3% of nitrate accumulation in four of the five lakes, suggesting a paramount role of nitrification in regulating N transformation and the timing of chemical conditions under ice. Winter nitrate accumulation rates ranged from 0.15 μ g N L −1 d −1 to 2.7 μ g N L −1 d −1 (0.011–0.19 μ M d −1 ), and the mean for intermediate depths was 0.94 μ g N L −1 d −1 (0.067 μ M d −1 ). Given that winters with shorter ice duration (< 120 d) have become more frequent in these lakes since the late 1990s, peak winter nitrate concentrations and cumulative nitrate production under ice may be declining. As ice extent and duration change, the physical and chemical conditions supporting life will shift. This research suggests we may expect changes in the form and amount of inorganic N, and altered dissolved nitrogen : phosphorus ratios, in lakes during winters with shorter ice duration.

Limnology and Oceanography Letters

Microplastic concentrations in two Oregon bivalve species: Spatial, temporal, and species variability

Microplastics are an ecological stressor with implications for ecosystem and human health when present in seafood. We quantified microplastic types, concentrations, anatomical burdens, geographic distribution, and temporal differences in Pacific oysters ( Crassostrea gigas ) and Pacific razor clams ( Siliqua patula ) from 15 Oregon coast, U.S.A. sites. Microplastics were present in organisms from all sites. On average, whole oysters and razor clams contained 10.95 ± 0.77 and 8.84 ± 0.45 microplastic pieces per individual, or 0.35 ± 0.04 pieces g −1 tissue and 0.16 ± 0.02 pieces g −1 tissue, respectively. Contamination was quantified but not subtracted. Over 99% of microplastics were fibers. Material type was determined using Fourier‐transform infrared spectroscopy. Spring samples contained more microplastics than summer samples in oysters but not razor clams. Our study is the first to document microplastics in Pacific razor clams and provides important coast‐wide data to compare microplastic burden across species, seasons, and sites.

Oregon

Increasing accuracy of lake nutrient predictions in thousands of lakes by leveraging water clarity data

Aquatic scientists require robust, accurate information about nutrient concentrations and indicators of algal biomass in unsampled lakes in order to understand and predict the effects of global climate and land-use change. Historically, lake and landscape characteristics have been used as predictor variables in regression models to generate nutrient predictions, but often with significant uncertainty. An alternative approach to improve predictions is to leverage the observed relationship between water clarity and nutrients, which is possible because water clarity is more commonly measured than lake nutrients. We used a joint-nutrient model that conditioned predictions of total phosphorus, nitrogen, and chlorophyll a on observed water clarity. Our results demonstrated substantial reductions (8–27%; median = 23%) in prediction error when conditioning on water clarity. These models will provide new opportunities for predicting nutrient concentrations of unsampled lakes across broad spatial scales with reduced uncertainty.

Limnology and Oceanography Letters

Thinking like a consumer: Linking aquatic basal metabolism and consumer dynamics

The increasing availability of high‐frequency freshwater ecosystem metabolism data provides an opportunity to identify links between metabolic regimes, as gross primary production and ecosystem respiration patterns, and consumer energetics with the potential to improve our current understanding of consumer dynamics (e.g., population dynamics, community structure, trophic interactions). We describe a conceptual framework linking metabolic regimes of flowing waters with consumer community dynamics. We use this framework to identify three emerging research needs: (1) quantifying the linkage of metabolism and consumer production data via food web theory and carbon use efficiencies, (2) evaluating the roles of metabolic dynamics and other environmental regimes (e.g., hydrology, light) in consumer dynamics, and (3) determining the degree to which metabolic regimes influence the evolution of consumer traits and phenology. Addressing these needs will improve the understanding of consumer biomass and production patterns as metabolic regimes can be viewed as an emergent property of food webs.

Limnology and Oceanography Letters

Reconciling models and measurements of marsh vulnerability to sea level rise

Tidal marsh survival in the face of sea level rise (SLR) and declining sediment supply often depends on the ability of marshes to build soil vertically. However, numerical models typically predict survival under rates of SLR that far exceed field-based measurements of vertical accretion. Here, we combine novel measurements from seven U.S. Atlantic Coast marshes and data from 70 additional marshes from around the world to illustrate that—over continental scales—70% of variability in marsh accretion rates can be explained by suspended sediment concentratin (SSC) and spring tidal range (TR). Apparent discrepancies between models and measurements can be explained by differing responses in high marshes and low marshes, the latter of which accretes faster for a given SSC and TR. Together these results help bridge the gap between models and measurements, and reinforce the paradigm that sediment supply is the key determinant of wetland vulnerability at continental scales.

Limnology and Oceanography Letters

Classifying freshwater salinity regimes in central and western U.S. streams and rivers

Freshwater salinization of rivers is occurring across the globe because of nonpoint source loading of salts from anthropogenic activities such as agriculture, urbanization, and resource extraction that accelerate weathering and release salts. Multidecadal trends in river salinity are well characterized, yet our understanding of annual regimes of salinity in rivers draining diverse central and western U.S. landscapes and their associated catchment attributes is limited. We classified annual salinity regimes in 242 stream locations through dynamic time warping and fuzzy c-medoids clustering of salinity time series. We found two dominant regimes in salinity characterized by an annual summer–fall peak or spring decline . Using random forest regression, we found that precipitation amount, stream slope, and soil salinity were the most important predictors of salinity regime classification. Advancing our understanding of salinity regimes in rivers will improve our ability to predict and mitigate the effects of salinization in freshwater ecosystems through management interventions.

Limnology and Oceanography Letters

Variability in marsh migration potential determined by topographic rather than anthropogenic constraints in the Chesapeake Bay region

Sea level rise (SLR) and saltwater intrusion are driving inland shifts in coastal ecosystems. Here, we make high-resolution (1 m) predictions of land conversion under future SLR scenarios in 81 watersheds surrounding Chesapeake Bay, United States, a hotspot for accelerated SLR and saltwater intrusion. We find that 1050–3748 km 2 of marsh could be created by 2100, largely at the expense of forested wetlands. Predicted marsh migration exceeds total current tidal marsh area and is ~ 4× greater than historical observations. Anthropogenic land use in marsh migration areas is concentrated within a few watersheds and minimally impacts calculated metrics of marsh resilience. Despite regional marsh area maintenance, local ecosystem service replacement within vulnerable watersheds remains uncertain. However, our work suggests that topography rather than land use drives spatial variability in wetland vulnerability regionally, and that rural land conversion is needed to compensate for extensive areal losses on heavily developed coasts globally.

Delaware, Maryland, Virginia

Taking steps to address inequities in open-access publishing through an early career publication honor

Access to resources—whether human, financial, or social—is a key indicator of research output and, in turn, academic career progression. However, resources are not equally distributed among scientists and disparities often stem from external factors. This reality is particularly impactful for early career researchers (ECRs) who have limited control over the resources available to them to advance their careers. The resources needed to fund open-access (OA) publishing are a well-known source of academic inequity (Ross-Hellauer 2022 ). Despite this, wide support for OA publishing exists across the scientific community, largely because OA articles increase access to the scientific literature by removing costly paywalls (Piwowar et al. 2018 ). Benefits of OA publishing also exist for individual researchers; OA studies are read and cited more, so much so that an “open access citation advantage” has been described (McCabe and Snyder 2014 ). Depending on the methods and journals studied, this advantage ranges from an 8 to 40% increase in citation rate (Piwowar et al. 2018 ). The OA publishing model is set to expand further, with influential groups seeking to mandate OA publishing (e.g., Plan S; Else 2021 ) including recent guidance from the United States Office of Science and Technology Policy (The White House 2022 ). However, OA publishing remains expensive, often prohibitively so, and OA fees deter ECRs broadly (Sarabipour et al. 2019 ), and particularly those from the Global South (Kwon 2022 ; Santidrián Tomillo et al. 2022 ).

Limnology and Oceanography Letters

Extent, patterns, and drivers of hypoxia in the world's streams and rivers

Hypoxia in coastal waters and lakes is widely recognized as a detrimental environmental issue, yet we lack a comparable understanding of hypoxia in rivers. We investigated controls on hypoxia using 118 million paired observations of dissolved oxygen (DO) concentration and water temperature in over 125,000 locations in rivers from 93 countries. We found hypoxia (DO < 2 mg L −1 ) in 12.6% of all river sites across 53 countries, but no consistent trend in prevalence since 1950. High-frequency data reveal a 3-h median duration of hypoxic events which are most likely to initiate at night. River attributes were better predictors of riverine hypoxia occurrence than watershed land cover, topography, and climate characteristics. Hypoxia was more likely to occur in warmer, smaller, and lower-gradient rivers, particularly those draining urban or wetland land cover. Our findings suggest that riverine hypoxia and the resulting impacts on ecosystems may be more pervasive than previously assumed.

Limnology and Oceanography - Letters

Taxonomic identity, biodiversity, and antecedent disturbances shape the dimensional stability of stream invertebrates

The “dimensional stability” approach measures different components of ecological stability to investigate how they are related. Yet, most empirical work has used small-scale and short-term experimental manipulations. Here, we apply this framework to a long-term observational dataset of stream macroinvertebrates sampled between the winter flooding and summer monsoon seasons. We test hypotheses that relate variation among stability metrics across different taxa, the magnitude of antecedent (monsoon) and immediate (winter) floods to stability metrics, and the relative importance of disturbance magnitude and taxonomic richness on community dimensional stability. Cluster analysis revealed four distinct stability types, and we found that the magnitude of floods during the prior monsoon was more important in influencing stability than the winter flood itself. For dimensional stability at the community level, taxonomic richness was more important than disturbance magnitude. This work demonstrates that abiotic and biotic factors determine dimensional stability in a natural ecosystem.

Limnology and Oceanography Letters

Over half a century record of limnology data from Lake Powell, desert southwest United States: From reservoir filling to present day (1964–2021)

Lake Powell is a large water storage reservoir in the arid southwestern United States. Here, we present a 58-yr limnology dataset that captures water quality parameters from reservoir filling to present day (temperature, salinity, major ions, total suspended solids), as well as a 38-yr record of Secchi depth, and a ~ 30-yr record of nutrients, phytoplankton, and zooplankton assemblages. The dataset includes 5208 unique site visits spanning 258 unique sites of which 9 have been consistently visited. It also spans the establishment of an invasive bivalve ( Dreissena bugensis, i.e. Quagga mussel) which was first detected in 2012. Given the general lack of long-term data from lakes or reservoirs in arid regions, this dataset represents a unique contribution to regional, continental, and global-scale limnology studies. As the hot drought in the desert southwest continues, we expect this dataset will inform water management decision-making for this largest reservoir in the Upper Colorado River Basin.

Arizona, Utah

Validity of the Landsat surface reflectance archive for aquatic science: Implications for cloud-based analysis

Originally developed for terrestrial science and applications, the US Geological Survey Landsat surface reflectance (SR) archive spanning ~ 40 yr of observations has been increasingly utilized in large-scale water-quality studies. These products, however, have not been rigorously validated using in situ measured reflectance. This letter quantifies and demonstrates the quality of the SR products by harnessing a sizeable global dataset ( N = 1100). We found that the Landsat 8/9 SR in the green and red bands marginally meet the targeted accuracy requirements (30%), whereas the uncertainties in the blue and coastal-aerosol bands ranged from 48% to 110%. We further observed > +25% biases in the visible bands of Landsat 5/7 SR, which can introduce an apparent downward trend when applied in time-series analyses combined with Landsat 8/9. Users must exercise caution when using this archive for trend analyses, and progress in atmospheric correction is required to foster advanced applications of the Landsat archive for aquatic science.

Limnology and Oceanography Letters