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At least 109 records · Page 6Linked to original sources
USGS2020

Source-tracking approach for detecting and identifying sources of wastewater in waters of Hawaiʻi

Elevated concentrations of nutrients and the fecal-indicator bacteria enterococci are occasionally detected in Hawai‘i’s surface waters by the State of Hawai‘i Department of Health Clean Water Branch. Management efforts to improve the water quality of surface waters are complicated by the fact that nutrients and enterococci can originate from several sources, including wastewater, animal waste, and soils. Wastewater often is the suspected source of nutrients and bacteria, but the source may not always be unequivocally identifiable from the Clean Water Branch’s routine monitoring efforts. This report—prepared in cooperation with the State of Hawai‘i Department of Health Clean Water Branch—describes a source-tracking approach for Hawai‘i that is meant to help investigators determine whether wastewater is present in the environment and where wastewater might be originating, if it is present. Wastewater sources include domestic wastewater entering the environment through on-site disposal systems and municipal wastewater entering the environment through leaky sewer systems or injection-well disposal systems. The source-tracking approach relies on the use of field-measured water properties and multiple chemical tracers of wastewater, including optical brighteners, nutrients, hydrogen and oxygen isotopes in water, nitrogen and oxygen isotopes in nitrate, organic waste compounds, and human-use pharmaceutical compounds. The source-tracking approach proposes the following sequence of steps for investigators to execute: (1) gather background information on the study area, (2) conduct trolling-instrument surveys of physical properties of surface water and identify groundwater-discharge locations, (3) collect water samples at reconnaissance sites and analyze the samples for detergent optical brighteners and specific conductance, (4) collect water samples at targeted sites and have appropriate laboratories analyze the samples for chemical tracers of wastewater, and (5) evaluate analytical results for chemical tracers of wastewater and conclude whether wastewater is present in sampled waters. The conclusions can guide management and stakeholder efforts to protect and improve the quality of Hawai‘i’s water resources.

Hawaii↗
USGS2023

Creek and quarry water quality at Pipestone National Monument and pilot study of pathogen detection methods in waterfall mist at Winnewissa Falls, Pipestone, Minnesota, 2018–19

Pipestone National Monument is a 301-acre site sacred to many Native American Tribes, providing cultural exhibits and walking trails to Pipestone Creek, Winnewissa Falls, and historical pipestone quarries for numerous visitors each year. However, the Minnesota Pollution Control Agency has determined turbidity and fecal coliform bacteria occur in Pipestone Creek in high enough numbers to be a potential health hazard. Concerns also were raised about exposure risk from waterfall mist to visitors and staff. The U.S. Geological Survey and the National Park Service collaborated on a study to collect 21 water-quality samples from 8 creek sites and 3 quarries in 2018 and analyzed them for over 250 water-quality parameters and contaminants. Additional samples were collected in August 2019 to assess the waterfall mists from Winnewissa Falls. Nutrient concentrations in the creek and quarries were elevated in 2018, indicating they are affected by agricultural inputs. All sample concentrations for nitrate and total nitrogen in Pipestone Creek exceeded Minnesota standards and U.S. Environmental Protection Agency nutrient criteria. Minnesota standards and U.S. Environmental Protection Agency nutrient criteria for total phosphorus also were exceeded in some of the quarry samples. Twenty of 210 micropollutants had measurable concentrations: 13 pesticides, 5 pharmaceuticals, and 2 other types of micropollutants. Atrazine, deethylatrazine, and metolachlor ethanesulfonic acid were detected in all 21 samples collected during the study. The five pharmaceuticals detected were acetaminophen, gabapentin, gemfibrozil, metformin, and oxycodone. Gabapentin (10 of 21 samples) and metformin (8 of 21 samples) were the most commonly detected pharmaceuticals. None of the detected micropollutant concentrations exceeded any Minnesota standards or U.S. Environmental Protection Agency aquatic life benchmarks, except the acute toxicity benchmark for nonvascular plants for atrazine. Two cyanotoxins, anatoxin-a and microcystin, were detected, but concentrations were below U.S. Environmental Protection Agency guidelines for swimming or recreation. Notably, total coliform, fecal coliform, and Escherichia coli were detected in all creek samples, and concentrations generally decreased downstream, suggesting contamination potentially occurred upstream from the monument. Mycobacterium avium ssp. paratuberculosis was not detected in any creek sediment samples but was detected in three water samples from the creek. Three organisms were detected in the 2019 water and mist sampling from Winnewissa Falls. Two of these organisms can cause illness in humans ( Cryptosporidium and Legionella ), and a third (ruminant Bacteroides ) is an indicator of manure contamination. Despite few samples, pathogen-positive water samples and air sampling demonstrated the feasibility and utility of the mist sampling approach outlined in this report.

Minnesota↗
USGS2013

U.S. Geological Survey ecosystems science strategy—Advancing discovery and application through collaboration

Executive Summary Ecosystem science is critical to making informed decisions about natural resources that can sustain our Nation’s economic and environmental well-being. Resource managers and policymakers are faced with countless decisions each year at local, regional, and national levels on issues as diverse as renewable and nonrenewable energy development, agriculture, forestry, water supply, and resource allocations at the urban-rural interface. The urgency for sound decisionmaking is increasing dramatically as the world is being transformed at an unprecedented pace and in uncertain directions. Environmental changes are associated with natural hazards, greenhouse gas emissions, and increasing demands for water, land, food, energy, mineral, and living resources. At risk is the Nation’s environmental capital, the goods and services provided by resilient ecosystems that are vital to the health and wellbeing of human societies. Ecosystem science—the study of systems of organisms interacting with their environment and the consequences of natural and human-induced change on these systems—is necessary to inform decisionmakers as they develop policies to adapt to these changes. This Ecosystems Science Strategy is built on a framework that includes basic and applied science. It highlights the critical roles that U.S. Geological Survey (USGS) scientists and partners can play in building scientific understanding and providing timely information to decisionmakers. The strategy underscores the connection between scientific discoveries and the application of new knowledge, and it integrates ecosystem science and decisionmaking, producing new scientific outcomes to assist resource managers and providing public benefits. We envision the USGS as a leader in integrating scientific information into decisionmaking processes that affect the Nation’s natural resources and human well-being. The USGS is uniquely positioned to play a pivotal role in ecosystem science. With its wide range of expertise, the Bureau can bring holistic, cross-scale, interdisciplinary capabilities to the design and conduct of monitoring, research, and modeling and to new technologies for data collection, management, and visualization. Collectively, these capabilities can be used to reveal ecological patterns and processes, explain how and why ecosystems change, and forecast change over different spatial and temporal scales. USGS science can provide managers with options and decision-support tools to use resources sustainably. The USGS has long-standing, collaborative relationships with the Department of the Interior (DOI) and other partners in the natural sciences, in both conducting science and applying the results. The USGS engages these partners in cooperative investigations that otherwise would lack the necessary support or be too expensive for a single bureau to conduct. The heart of this strategy is a framework for USGS ecosystems science that focuses on five long-term goals, which are seen as interconnected components that reinforce our vision of the USGS providing science that is at the forefront of decisionmaking: Improve understanding of ecosystem structure, function, and processes. The focus for this goal is an understanding of how ecosystems work, including the dynamics of species, their populations, interactions, and genetics, and how they change across spatial and temporal scales. Advance understanding of how drivers influence ecosystem change. The challenges here are explaining the drivers of ecosystem change, their spatio-temporal patterns, their uncertainties and interactions, and their influence on ecosystem processes and dynamics. Improve understanding of the services that ecosystems provide to society. Here the emphasis is on the measurement of environmental capital and ecosystem services, and the identification of sources and patterns of change in space and time. Develop tools, technologies, and capacities to inform decisionmaking about ecosystems. This includes developing new technologies and approaches for conducting applications-oriented ecosystem science. A principal challenge will be how to quantify uncertainty and incorporate it in decision analysis. Apply science to enhance strategies for management, conservation, and restoration of ecosystems. These challenges include development of novel approaches to monitoring, assessment, and restoration of ecosystems; new methods to address species of concern and communities at risk; and innovations in decision analysis and support to address imminent ecosystem changes or those that are underway. Closely integrated with the five goals are four strategic approaches that provide the path forward for the USGS Ecosystems Mission Area. These approaches cross-cut all of the goals and are seen as essential to the implementation of this strategy: Assess information needs for ecosystem science through enhanced partnerships. Work with the DOI and other agencies and institutions to identify, design, and implement priority decision-driven ecological research. Promote the use of interdisciplinary ecosystem science. Design and conduct interdisciplinary process-oriented research in ecosystem science. Enhance modeling and forecasting. Build models to forecast ecosystem change, assess future management scenarios, and reduce uncertainties through an adaptive learning process. Support decisionmaking. Use quantitative approaches to assess the vulnerabilities of ecosystems, habitats, and species, and evaluate strategies for adaptation, restoration, and sustainable management. Following the four strategic approaches are a set of proposed actions that represent a sampling of specific USGS activities that align with this strategy and that address the Nation’s most pressing environmental needs. The strategy emphasizes coordination of activities across the USGS mission areas pursuant to these goals. Ecosystem science is inherently interdisciplinary and requires a broad perspective that incorporates the biological and physical sciences, climate science, information technology, and scientific capacity in mission areas across the Bureau. With its emphasis on coordination, this strategy can provide a critical underpinning for integrated science efforts with scientists from multiple mission areas of the USGS working together. Of course, the USGS will continue to conduct discipline-specific and interdisciplinary investigations, and both will continue to be vital parts of the ecosystem science portfolio. Finally, the strategy stresses the importance of coordination with other Federal agencies and organizations in the natural resources community. The USGS collaborates with resource agencies in the DOI and other organizations throughout the world to meet societal needs for species and ecosystem management. Working with these agencies and organizations, the USGS will play a key role in guiding sound decisionmaking during the next decade by advancing the scientific foundation for sustaining the natural resources that diverse, productive, resilient ecosystems provide.

Circular↗
USGS2012

The U.S. Geological Survey Ecosystem Science Strategy, 2012-2022 - Advancing discovery and application through collaboration

Ecosystem science is critical to making informed decisions about natural resources that can sustain our Nation’s economic and environmental well-being. Resource managers and policy-makers are faced with countless decisions each year at local, state, tribal, territorial, and national levels on issues as diverse as renewable and non-renewable energy development, agriculture, forestry, water supply, and resource allocations at the urban-rural interface. The urgency for sound decision-making is increasing dramatically as the world is being transformed at an unprecedented pace and in uncertain directions. Environmental changes are associated with natural hazards, greenhouse gas emissions, and increasing demands for water, land, food, energy, mineral, and living resources. At risk is the Nation’s environmental capital, the goods and services provided by resilient ecosystems that are vital to the health and well-being of human societies. Ecosystem science—the study of systems of organisms interacting with their environment and the consequences of natural and human-induced change on these systems—is necessary to inform decision-makers as they develop policies to adapt to these changes. This Ecosystems Science Strategy is built on a framework that includes basic and applied science. It highlights the critical roles that USGS scientists and partners can play in building scientific understanding and providing timely information to decision-makers. The strategy underscores the connection between scientific discoveries and the application of new knowledge. The strategy integrates ecosystem science and decision-making, producing new scientific outcomes to assist resource managers and providing public benefits. The USGS is uniquely positioned to play an important role in ecosystem science. With its wide range of expertise, the agency can bring holistic, cross-scale, interdisciplinary capabilities to the design and conduct of monitoring, research, and modeling and to new technologies for data collection, management, and visualization. Collectively, these capabilities can be used to reveal ecological patterns and processes, explain how and why ecosystems change, and forecast change over different spatial and temporal scales. USGS science can provide managers with options and decision-support tools to use resources sustainably. The USGS has long-standing, collaborative relationships with the DOI and other partners in the natural sciences, in both conducting science and its application. The USGS engages these partners in cooperative investigations that otherwise would lack the necessary support or be too expensive for a single bureau to conduct. The heart of this strategy is a framework and vision for USGS ecosystems science that focuses on five long-term goals, which are seen as interconnected and reinforcing components: • Improve understanding of ecosystem structure, function, and processes. The focus for this goal is an understanding of how ecosystems work, including the dynamics of species, their populations, interactions, and genetics, and how they change across spatial and temporal scales. • Advance understanding of how drivers influence ecosystem change. The challenges here are explaining the drivers of ecosystem change, their spatio-temporal patterns, their uncertainties and interactions, and their influence on ecosystem processes and dynamics. • Improve understanding of the services that ecosystems provide to society. Here the emphasis is on the measurement of environmental capital and ecosystem services, and the identification of sources and patterns of change in space and time. • Develop tools, technologies, and capacities to inform decision-making about ecosystems. This includes developing new technologies and approaches for conducting applications-oriented ecosystem science. A principal challenge will be how to quantify uncertainty and incorporate it in decision analysis. • Apply science to enhance strategies for management, conservation, and restoration of ecosystems. These challenges include development of novel approaches to monitoring, assessment, and restoration of ecosystems; new methods to address species of concern and communities at risk; and innovations in decision analysis and support to address imminent ecosystem changes or those that are underway. Closely integrated with the five goals are four strategic approaches that provide the path forward for the USGS Ecosystems Mission Area. These approaches cross-cut all of the goals and are seen as essential to the implementation of this strategy: • Assess information needs for ecosystem science through enhanced partnerships. Work with the DOI and other agencies and institutions to identify, design, and implement priority decision-driven ecological research. • Promote the use of interdisciplinary ecosystem science. Design and conduct interdisciplinary process-oriented research in ecosystem science. • Enhance modeling and forecasting. Build models to forecast ecosystem change, assess future management scenarios, and reduce uncertainties through an adaptive learning process. • Support decision-making. Use quantitative approaches to assess the vulnerabilities of ecosystems, habitats, and species, and evaluate strategies for adaptation, restoration, and sustainable management. Following the strategic approaches are a set of proposed actions that represent a sampling of specific activities that align with this strategy and that address the Nation’s most pressing environmental needs. The strategy emphasizes coordination of activities across the USGS mission areas pursuant to these goals. Ecosystem science is inherently interdisciplinary and requires a broad perspective that incorporates the biological and physical sciences, climate science, information technology, and scientific capacity in mission areas across the Bureau. With its emphasis on coordination, this strategy can provide a critical underpinning for integrated science efforts with scientists from multiple mission areas of the USGS working together. Of course, the USGS will continue to conduct both discipline-specific and interdisciplinary investigations, and both will continue to be vital parts of the ecosystem science portfolio. Finally, the strategy stresses the importance of coordination with other Federal agencies and organizations in the natural resources community. The USGS collaborates with resource agencies in the DOI and other organizations throughout the world to meet societal needs for species and ecosystem management. Working with these agencies and organizations, the USGS will play a key role over the next decade in advancing the scientific foundation for sustaining the natural resources that diverse, productive, resilient ecosystems provide.

Open-File Report↗
USGS2025

Tapwater-contaminant mixtures and risk in a biofuel-facility impacted private-well community

We assessed private-well drinking water (DW) at the point of use ( i.e. , tapwater, TW) within a rural Nebraska community around a state-closed biofuel facility, which used pesticide-treated corn seed as feedstock for ethanol production. Organic (485), inorganic (34), and microbial (13) analytes were assessed at 15 locations in June 2022, to evaluate the relative contribution of facility-consistent pesticides (seed-treatment fungicides and insecticides) to overall TW-contaminant exposures and predicted human-health risks. Thirty-three organics (12 pesticides) and 28 inorganics were detected, the former including the fungicide sedaxane, insecticide chlorantraniliprole, and multiple neonicotinoid insecticides/degradates, all consistent with seed treatment and respective biofuel-facility waste. Assessment of pesticides only at extant point-of-use (POU) treatment taps at three sites demonstrated complete elimination of all TW-pesticide detections. Based on detection of maximum pesticide concentrations in a home located downstream along a creek capturing facility runoff, pesticides only were assessed in January 2023 again at this home and at three adjacent locations, confirming results at the former and documenting decreasing TW-pesticide concentrations, including neonicotinoids, with increasing distance from the creek. Human-health DW benchmarks are not available for many detected pesticides, including the detected fungicide and insecticides, but precautionary screening levels were exceeded frequently due to multiple inorganics. The results indicate that exposures to multiple (median: 4.5; range: 1–7) co-occurring TW contaminants of potential human-health concern are common, warranting consideration of point-of-entry or POU treatment(s) throughout the community to reduce or eliminate unrecognized exposures to TW contaminants, including facility-associated pesticides in down-gradient locations. More broadly, results emphasize the importance of continued characterization of private-TW exposures, employing a environmentally informative analytical scope, to identify and mitigate risks of unrecognized exposures in private-well-dependent rural communities.

Nebraska↗
USGS1994

Life-history organization of Yellowstone cutthroat trout (Oncorhynchus clarki bouvieri) in Yellowstone Lake

Life-history organization of the cutthroat trout (Oncorhynchus clarki) may be viewed at various levels, including species, subspecies, metapopulation, population, or individual. Each level varies in spatial scale and temporal persistence, and components at each level continually change with changes in environment. Cutthroat trout are widely distributed throughout the western United States, occurring in such diverse environments as coastal rivers of the Pacific Northwest and interior streams of the Great Basin. During its evolution the species has organized into 14 subspecies with many different life-history characteristics and habitat requirements. Within subspecies, organization is equally complex. For example, life-history traits, such as average size and age, migration strategy, and migration timing, vary among individual spawning populations of Yellowstone cutthroat trout (Oncorhynchus clarki bouvieri) in tributary streams of Yellowstone Lake. Understanding the effects of human perturbations on life-history organization is critical for management of the cutthroat trout and other polytypic salmonid species. Loss of diversity at any hierarchical level jeopardizes the long-term ability of the species to adapt to changing environments, and it may also lead to increased fluctuations in abundance and yield and increase the risk of extinction.

Canadian Journal of Fisheries and Aquatic Sciences↗
USGS2021

Preserving soil organic carbon in prairie wetlands of central North America

Wetlands of the Prairie Pothole Region (PPR) in the Great Plains of central North America are numerous, densely distributed, and have highly productive plant and animal communities (Photo 49). When in a natural, unaltered condition, these wetlands store relatively large amounts of organic carbon in their soils (Photo 50). Human alterations, such as extensive drainage and land-use conversion for agriculture (Figure 7), have been linked with the loss of soil organic carbon (SOC) and associated emission of carbon dioxide (CO 2 ), as well as impacts to other ecosystem services provided by these wetlands, such as wildlife and waterfowl habitat, plant biodiversity, flood mitigation, groundwater recharge, nutrient removal and retention, and recreation (Gleason et al., 2011). It has been estimated that more than half of the wetlands of the PPR have been lost due to drainage and other disturbances, with losses approaching 90 percent in some areas (Dahl, 2014; Serran et al., 2018). The goal of this case study was to identify land-management strategies that are consistent with maintaining and increasing SOC stocks of PPR wetlands. Two overarching strategies generally are promoted to preserve and enhance SOC stocks of PPR wetlands: avoided drainage and rewetting or restoration. Avoided drainage involves protecting natural, unaltered wetlands from impacts of human actives with the purpose of retaining wetland functions and services such as carbon storage. Rewetting or restoration involves reestablishing natural hydrology and land use with the purpose of enhancing wetland functions and services that were previously lost due to human activities. Avoided drainage provides immediate and long-lasting benefits, while replenishing SOC through rewetting and restoration requires many decades. Both strategies are associated with higher methane (CH 4 ) emissions but lower CO 2 and nitrous oxide (N 2 O) emissions.

Alberta, Iowa, Manitoba, Minnesota, Montana, North↗
USGS2023

Photochemical mobilization of dissolved hydrocarbon oxidation products from petroleum contaminated soil into a shallow aquifer activate human nuclear receptors

Elevated non-volatile dissolved organic carbon (NVDOC) concentrations in groundwater monitoring wells under oil-contaminated hydrophobic soils originating from a pipeline rupture at the National Crude Oil Spill & Natural Attenuation Research Site near Bemidji, MN are documented.. We hypothesized the elevated NVDOC is comprised of water-soluble photooxidation products transported from the surface to the aquifer. We use field and laboratory samples in combination with complementary analytical methods to test this hypothesis and determine the biological response to these products. Observations from optical spectroscopy and ultrahigh-resolution mass spectrometry reveal a significant correlation between the chemical composition of NVDOC leached from photochemically weathered soils and groundwater monitoring wells with high NVDOC concentrations measured in the aquifer beneath the contaminated soil. Conversely, the chemical composition from the uncontaminated soil photoleachate, matches the NVDOC observed in the uncontaminated wells. Contaminated groundwater and photodissolution leachates from contaminated soil activated biological targets indicative of xenobiotic metabolism and exhibited potential for adverse effects. Newly formed hydrocarbon oxidation products (HOPs) from fresh oil could be distinguished from those downgradient. This study illustrates another pathway for dissolved HOPs to infiltrate groundwater and potentially affect human health and the environment.

Minnesota↗
USGS2004

Streamflow and water-quality characteristics at selected sites of the St. Johns River in central Florida, 1933 to 2002

To meet water-supply needs in central Florida for 2020, the St. Johns River is being considered as a source of water supply to augment ground water from the Floridan aquifer system. Current (2004) information on streamflow and water-quality characteristics of the St. Johns River in east-central Florida is needed by water resources planners to assess the feasibility of using the river as an alternate source of water supply and to design water treatment facilities. To address this need, streamflow and water quality of the 90-mile-long middle reach of the St. Johns River, Florida, from downstream of Lake Poinsett to near DeLand, were characterized by using retrospective (1991-99) and recently collected data (2000-02). Streamflow characteristics were determined by using data from water years 1933-2000. Water-quality characteristics were described using data from 1991-99 at 15 sites on the St. Johns River and 1 site each near the mouths of the Econlockhatchee and Wekiva Rivers. Data were augmented with biweekly water-quality data and continuous physical properties data at four St. Johns River sites and quarterly data from sites on the Wekiva River, Blackwater Creek, and downstream of Blue Springs from 2000-02. Water-quality constituents described were limited to information on physical properties, major ions and other inorganic constituents, nutrients, organic carbon, suspended solids, and phytoplankton chlorophyll-a. The occurrence of antibiotics, human prescription and nonprescription drugs, pesticides, and a suite of organic constituents, which may indicate domestic or industrial waste, were described at two St. Johns River sites using limited data collected in water years 2002-03. The occurrence of these same constituents in water from a pilot water treatment facility on Lake Monroe also was described using data from one sampling event conducted in March 2003. Dissolved oxygen concentration and water pH values in the St. Johns River were significantly lower during high-flow conditions than during low-flow conditions. Low dissolved oxygen concentrations may have resulted from the input of water from marsh areas or the subsequent decomposition of organic matter transported to the river during high-flow events. Low water pH values during high-flow conditions likely resulted from the increased dissolved organic carbon concentrations in the river. Concentrations of total dissolved solids and other inorganic constituents in the St. Johns River were inversely related with streamflow. Most major ion concentrations, total dissolved solids concentrations, and specific conductance values varied substantially at the Christmas, Sanford, and DeLand sites during low-flow periods in 2000-01 probably reflecting wind and tidal effects. Sulfide concentrations as high as 6 milligrams per liter (mg/L) were measured in the St. Johns River during high-flow periods. Increased sulfide concentrations likely resulted from the decomposition of organic matter or the reduction of sulfate. Bromide concentrations as high as 17 mg/L were measured at the most upstream site on the St. Johns River during 2000-02. Temporal variations in bromide were characterized by sharp peaks in concentration during low-flow periods. Peaks in bromide concentrations tended to coincide with peaks in chloride concentrations because the likely source of both constituents is ground water affected by relict seawater. Median dissolved organic carbon concentrations ranged from 15 to 26 mg/L during 2000-02, and concentrations as high as 42 mg/L were measured. Water color values and dissolved organic carbon concentrations generally were significantly greater during high-flow conditions than during low-flow conditions. Specific ultraviolet light absorbance data indicated the organic carbon during high-flow events was more aromatic in composition and likely originated from terrestrially derived sources compared to organic carbon in the river during other times of the year. D

Scientific Investigations Report↗
USGS2006

Disease emergence and resurgence—the wildlife-human connection

In 2000, the Global Outbreak Alert and Response Network (GOARN) was organized as a global disease watchdog group to coordinate disease outbreak information and health crisis response. The World Health Organization (WHO) is the headquarters for this network. Understandably, the primary focus for WHO is human health. However, diseases such as the H5N1 avian influenza epizootic in Asian bird populations demonstrate the need for integrating knowledge about disease emergence in animals and in humans. Aside from human disease concerns, H5N1 avian influenza has major economic consequences for the poultry industry worldwide. Many other emerging diseases, such as severe acute respiratory syndrome (SARS), monkeypox, Ebola fever, and West Nile fever, also have an important wildlife component. Despite these wildlife associations, the true integration of the wildlife component in approaches towards disease emergence remains elusive. This separation between wildlife and other species’ interests is counterproductive because the emergence of zoonotic viruses and other pathogens maintained by wildlife reservoir hosts is poorly understood. This book is about the wildlife component of emerging diseases. It is intended to enhance the reader’s awareness of the role of wildlife in disease emergence. By doing so, perhaps a more holistic approach to disease prevention and control will emerge for the benefit of human, domestic animal, and free-ranging wildlife populations alike. The perspectives offered are influenced by more than four decades of my experiences as a wildlife disease practitioner. Although wildlife are victims to many of the same disease agents affecting humans and domestic animals, many aspects of disease in free-ranging wildlife require different approaches than those commonly applied to address disease in humans or domestic animals. Nevertheless, the broader community of disease investigators and health care professionals has largely pursued a separatist approach for human, domestic animal, and wildlife rather than embracing the periodically proposed concept of “one medicine.” We especially need to embrace this concept as the human population increases because there will be more contact, direct and indirect, among humans, domestic animals, and wildlife. An “Ecology for a Crowded Planet” will be an even more pressing concern, and that includes increasing our understanding of disease ecology, especially that of the zoonoses.

Circular↗
USGS2014

W(h)ither the Oracle? Cognitive biases and other human challenges of integrated environmental modeling

Integrated environmental modeling (IEM) can organize and increase our knowledge of the complex, dynamic ecosystems that house our natural resources and control the quality of our environments. Human behavior, however, must be taken into account. Human biases/heuristics reflect adaptation over our evolutionary past to frequently experienced situations that affected our survival and that provided sharply distinguished feedbacks at the level of the individual. Unfortunately, human behavior is not adapted to the more diffusely experienced, less frequently encountered, problems and issues that IEM typically seeks to address in the simulation of natural resources and environments. While seeking inspiration from the prophetic traditions of the Oracle of Delphi, several human biases are identified that may affect how the science base of IEM is assembled, and how IEM results are interpreted and used. These biases are supported by personal observations, and by the findings of behavioral scientists. A process for critical analysis is proposed that solicits explicit accounting and cognizance of potential human biases. A number of suggestions are made to address the human challenges of IEM, in addition to maintaining attitudes of watchful humility, open-mindedness, honesty, and transparent accountability. These include creating a new area of study in the behavioral biogeosciences, using structured processes for engaging the modeling and stakeholder community in IEM, and using “red teams” to increase resilience of IEM constructs and use.

Conference Paper↗
USGS2014

Climate change influences on marine infectious diseases: implications for management and society

Infectious diseases are common in marine environments, but the effects of a changing climate on marine pathogens are not well understood. Here, we focus on reviewing current knowledge about how the climate drives hostpathogen interactions and infectious disease outbreaks. Climate-related impacts on marine diseases are being documented in corals, shellfish, finfish, and humans; these impacts are less clearly linked to other organisms. Oceans and people are inextricably linked, and marine diseases can both directly and indirectly affect human health, livelihoods, and well-being. We recommend an adaptive management approach to better increase the resilience of ocean systems vulnerable to marine diseases in a changing climate. Land-based management methods of quarantining, culling, and vaccinating are not successful in the ocean; therefore, forecasting conditions that lead to outbreaks and designing tools/approaches to influence these conditions may be the best way to manage marine disease.

Annual Review of Marine Science↗
USGS2014

Moving beyond too little, too late: managing emerging infectious diseases in wild populations requires international policy and partnerships

Emerging infectious diseases (EIDs) are on the rise due to multiple factors, including human facilitated movement of pathogens, broad-scale landscape changes, and perturbations to ecological systems (Jones et al. 2008; Fisher et al. 2012). Epidemics in wildlife are problematic because they can lead to pathogen spillover to new host organisms, erode biodiversity and threaten ecosystems that sustain human societies (Fisher et al. 2012; Kilpatrick 2011). There have been recent calls for large-scale research approaches to combat threats EIDs pose to wildlife (Sleeman 2013). While it is true that developing new analytical models, diagnostic assays and molecular tools will significantly avance outr abilities to respond to disease threats, we also propose that addressing difficult problems in EIDs will require considerable shofts in international health policy and infrastructure. While there are currently international organizations responsbile for rapidly initiating and coordinating preventative measures to control infectious diseases in human, livestock, and arable systems, there are few comparable instiutions that have the authority to implement transnational responses to EIDs in wildlife. This absence of well-developed infastructure hampers the rapid responses necessary to mitigate international spread of EIDs.

EcoHealth↗
USGS2007

A multiple-tracer approach for identifying sewage sources to an urban stream system

The presence of human-derived fecal coliform bacteria (sewage) in streams and rivers is recognized as a human health hazard. The source of these human-derived bacteria, however, is often difficult to identify and eliminate, because sewage can be delivered to streams through a variety of mechanisms, such as leaking sanitary sewers or private lateral lines, cross-connected pipes, straight pipes, sewer-line overflows, illicit dumping of septic waste, and vagrancy. A multiple-tracer study was conducted to identify site-specific sources of sewage in Accotink Creek, an urban stream in Fairfax County, Virginia, that is listed on the Commonwealth's priority list of impaired streams for violations of the fecal coliform bacteria standard. Beyond developing this multiple-tracer approach for locating sources of sewage inputs to Accotink Creek, the second objective of the study was to demonstrate how the multiple-tracer approach can be applied to other streams affected by sewage sources. The tracers used in this study were separated into indicator tracers, which are relatively simple and inexpensive to apply, and confirmatory tracers, which are relatively difficult and expensive to analyze. Indicator tracers include fecal coliform bacteria, surfactants, boron, chloride, chloride/bromide ratio, specific conductance, dissolved oxygen, turbidity, and water temperature. Confirmatory tracers include 13 organic compounds that are associated with human waste, including caffeine, cotinine, triclosan, a number of detergent metabolites, several fragrances, and several plasticizers. To identify sources of sewage to Accotink Creek, a detailed investigation of the Accotink Creek main channel, tributaries, and flowing storm drains was undertaken from 2001 to 2004. Sampling was conducted in a series of eight synoptic sampling events, each of which began at the most downstream site and extended upstream through the watershed and into the headwaters of each tributary. Using the synoptic sampling approach, 149 sites were sampled at least one time for indicator tracers; 52 of these sites also were sampled for confirmatory tracers at least one time. Through the analysis of multiple-tracer levels in the synoptic samples, three major sewage sources to the Accotink Creek stream network were identified, and several other minor sewage sources to the Accotink Creek system likely deserve additional investigation. Near the end of the synoptic sampling activities, three additional sampling methods were used to gain better understanding of the potential for sewage sources to the watershed. These additional sampling methods included optical brightener monitoring, intensive stream sampling using automated samplers, and additional sampling of several storm-drain networks. The samples obtained by these methods provided further understanding of possible sewage sources to the streams and a better understanding of the variability in the tracer concentrations at a given sampling site. Collectively, these additional sampling methods were a valuable complement to the synoptic sampling approach that was used for the bulk of this study. The study results provide an approach for local authorities to use in applying a relatively simple and inexpensive collection of tracers to locate sewage sources to streams. Although this multiple-tracer approach is effective in detecting sewage sources to streams, additional research is needed to better detect extremely low-volume sewage sources and better enable local authorities to identify the specific sources of the sewage once it is detected in a stream reach.

Virginia↗
USGS2021

Efficiency of bioaerosol samplers: A comparison study

Bioaerosols, including bacteria and fungi, are ubiquitous and have been shown to impact various organisms as well as biogeochemical cycles and human health. However, sample collection poses a challenge for aeromicrobiologists and can determine the success of a study. Establishing a standard collection procedure for bioaerosol sampling could help advance the field. We tested the efficiency (number of organisms collected and DNA yield per unit time) of three sampling devices: a membrane filtration device, a liquid impinger, and a portable electrostatic precipitator bioaerosol collector. We compared the efficiency of these three devices for both culture-dependent studies, by enumerating colony forming units (CFUs), and culture-independent studies, by extracting and quantifying total DNA. Our results show that the electrostatic precipitator collected microorganisms significantly more efficiently than the membrane filtration and liquid impingement in both types of studies over the same time interval. This is due to the high flow rate of the device. This work is important and timely because aeromicrobiology is currently restricted by long sampling times and risk of evaporation, desiccation, or freezing during sample, which increases with sampling times. Fieldwork convenience and portability of instruments are an additional challenge for sampling. Using a sampler that can overcome these technical hurdles can accelerate the advancement of the field, and the use of a lightweight, battery-powered, inexpensive, and portable bioaerosol collection device could address these limitations.

Aerobiologia↗
USGS1991

Water resources of the Red Lake Indian Reservation, northwestern Minnesota

This report presents the results of a study by the U.S. Geological Survey, done in cooperation with the Red Lake Indian Reservation Tribal Council, to evaluate the water resources of the contiguous Red Lake Indian Reservation. Water resources of the contiguous Red Lake Indian Reservation meet the present (1989) needs for potable supply and other household uses. In addition, they provide ecological, recreational, and aesthetic benefits. Mean annual precipitation in the study area is 22.7 inches. Approximately 90 percent of this precipitation returns to the atmosphere by evapotranspiration; the remainder becomes runoff. Some of the precipitation that contributes to evapotranspiration and runoff initially infiltrates the land surface and recharges the ground-water reservoir. The net recharge to ground water generally ranges from roughly 0.5 to 1.35 inches per year. Assuming negligible long-term changes in the amount of ground water in storage, the recharge to and discharge from the ground-water reservoir balance each other over time. Glacial-drift aquifers are the source of ground water in the Red Lake Indian Reservation. The most significant sources of ground-water supply are confined glacial-drift aquifers, which are discontinuous lenses of sand and gravel 50 to 150 feet below land surface. Estimated yields of wells completed in these aquifers range from approximately 20 to 240 gallons per minute. Lower and Upper Red Lakes, which extend over one fourth of the study area, are the largest surface-water bodies. The study area also includes streams and many smaller lakes. Most of the streams drain into Lower and Upper Red Lakes, and the lakes discharge into the Red Lake River. Spring snowmelt generally causes peak flows in the streams. Low-flow conditions commonly occur during midsummer to early fall and winter. The quality of ground water is suitable for drinking and other household uses, and the quality of the surface water generally meets U.S. Environmental Protection Agency criteria necessary for the maintenance of aquatic life. The major ions in both ground and surface water are calcium, magnesium, and bicarbonate. Lower and Upper Red Lakes are eutrophic to mesotrophic on the basis of their summer Secchi disk-transparency readings, which ranged from 2.6 to 8.2 feet. The concentration of total organic carbon in samples from Lower and Upper Red Lakes and four streams were below or, in the case of one stream, about equal to 30 milligrams per liter, which is indicative of water little affected by human activities. The sample with the highest organic carbon content was collected from a stream that drained peatlands, which were probably sources of organic matter in the runoff. The concentration of nitrite plus nitrate in samples collected from Lower and Upper Red Lakes in late summer was below 0.01 milligrams per liter, which is characteristic of water uncontaminated by animal wastes. Total phosphorus in these samples ranged from 0.01 to 0.02 milligrams per liter. Most of this phosphorus was in the particulate organic fraction because of the abundance of phytoplankton.

Minnesota↗
USGS2003

Internal cave gating for protection of colonies of the endangered gray bat (Myotis grisescens)

Persistent human disturbance is a major cause for the decline in populations of many cave-dwelling bats and other sensitive cave-obligate organisms. Cave gating has been used to eliminate human disturbance, but few studies have assessed directly the impact of such management activities on resident bats. In northeastern Oklahoma, USA, 25 entrances of caves inhabited by two endangered species and one endangered subspecies of bats are protected from human entry with internal gates. Because cave gates may impede ingress and egress of bats at caves, we evaluated the impacts of internal gates before and after their construction at six colonies of endangered gray bats ( Myotis grisescens ) from 1981 to 2001. No caves were abandoned by gray bats after the construction of internal gates; in fact, total numbers of gray bats using the six caves increased from 60,130 in 1981 to 70,640 in 2001. Two caves harbored more gray bats after gating, and three caves had no change in gray bat numbers after gating. We also compared initiations of emergences at three gated and three open-passage caves in June and July 1999–2000. No differences in timing of initiation of emergence were found between colonies in gated versus open-passage caves. Our results support the use of internal gates to protect and thereby enhance recovery of colonies of endangered gray bats. Additional research is encouraged to confirm that our observations on gray bats are generally applicable to other species of cave-dwelling bats.

Oklahoma↗
USGS2003

Sediment quantity and quality in three impoundments in Massachusetts

As part of a study with an overriding goal of providing information that would assist State and Federal agencies in developing screening protocols for managing sediments impounded behind dams that are potential candidates for removal, the U.S Geological Survey determined sediment quantity and quality at three locations: one on the French River and two on Yokum Brook, a tributary to the west branch of the Westfield River. Data collected with a global positioning system, a geographic information system, and sediment-thickness data aided in the creation of sediment maps and the calculation of sediment volumes at Perryville Pond on the French River in Webster, Massachusetts, and at the Silk Mill and Ballou Dams on Yokum Brook in Becket, Massachusetts. From these data the following sediment volumes were determined: Perryville Pond, 71,000 cubic yards, Silk Mill, 1,600 cubic yards, and Ballou, 800 cubic yards. Sediment characteristics were assessed in terms of grain size and concentrations of potentially hazardous organic compounds and metals. Assessment of the approaches and methods used at study sites indicated that ground-penetrating radar produced data that were extremely difficult and time-consuming to interpret for the three study sites. Because of these difficulties, a steel probe was ultimately used to determine sediment depth and extent for inclusion in the sediment maps. Use of these methods showed that, where sampling sites were accessible, a machine-driven coring device would be preferable to the physically exhausting, manual sediment-coring methods used in this investigation. Enzyme-linked immunosorbent assays were an effective tool for screening large numbers of samples for a range of organic contaminant compounds. An example calculation of the number of samples needed to characterize mean concentrations of contaminants indicated that the number of samples collected for most analytes was adequate; however, additional analyses for lead, copper, silver, arsenic, total petroleum hydrocarbons, and chlordane are needed to meet the criteria determined from the calculations. Particle-size analysis did not reveal a clear spatial distribution pattern at Perryville Pond. On average, less than 65 percent of each sample was greater in size than very fine sand. The sample with the highest percentage of clay-sized particles (24.3 percent) was collected just upstream from the dam and generally had the highest concentrations of contaminants determined here. In contrast, more than 90 percent of the sediment samples in the Becket impoundments had grain sizes larger than very fine sand; as determined by direct observation, rocks, cobbles, and boulders constituted a substantial amount of the material impounded at Becket. In general, the highest percentages of the finest particles, clays, occurred in association with the highest concentrations of contaminants. Enzyme-linked immunosorbent assays of the Perryville samples showed the widespread presence of petroleum hydrocarbons (16 out of 26 samples), polycyclic aromatic hydrocarbons (23 out of 26 samples), and chlordane (18 out of 26 samples); polychlorinated biphenyls were detected in five samples from four locations. Neither petroleum hydrocarbons nor polychlorinated biphenyls were detected at Becket, and chlordane was detected in only one sample. All 14 Becket samples contained polycyclic aromatic hydrocarbons. Replicate quality-control analyses revealed consistent results between paired samples. Samples from throughout Perryville Pond contained a number of metals at potentially toxic concentrations. These metals included arsenic, cadmium, copper, lead, nickel, and zinc. At Becket, no metals were found in elevated concentrations. In general, most of the concentrations of organic compounds and metals detected in Perryville Pond exceeded standards for benthic organisms, but only rarely exceeded standards for human contact. The most highly contaminated samples were collected from sites at the upstream and downstream ends of Perryville Pond. To estimate the potential toxicity of the sediment samples to invertebrates on the basis of their concentrations of metals and organic contaminants, consensus-based sediment-toxicity guidelines were applied. The results of the calculations based on these guidelines highlighted the locations of potentially toxic contaminant "hot spots" in Perryville Pond. Interpretation of sample data from the Becket impoundments did not indicate the existence of similar pockets of potentially toxic contamination.

Massachusetts↗