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Spatial variation in aquatic invertebrate and riparian songbird mercury exposure across a river-reservoir system with a legacy of mercury contamination

Mercury (Hg) loading and methylation in aquatic systems causes a variety of deleterious effects for fish and wildlife populations. Relatively little research has focused on Hg movement into riparian food webs and how this is modulated by habitat characteristics. This study characterized differences in Hg exposure in aquatic invertebrates and riparian songbirds across a large portion of the Willamette River system in western Oregon, starting at a Hg-contaminated Superfund site in the headwaters (Black Butte Hg Mine) and including a reservoir known to methylate Hg (Cottage Grove Reservoir), all downstream reaches (Coast Fork and Willamette River) and off-channel wetland complexes (Willamette Valley National Wildlife Refuge Complex). After accounting for year, date, and site differences in a mixed effects model, MeHg concentrations in aquatic invertebrates varied spatially among habitat categories and invertebrate orders. Similarly, THg in songbird blood varied by among habitat categories and bird species. The highest Hg concentrations occurred near the Hg mine, but Hg did not decline linearly with distance from the source of contamination. Birds were consistently elevated in Hg in habitats commonly associated with enhanced MeHg production, such as backwater or wetlands. We found a positive but weak correlation between aquatic invertebrate MeHg concentrations and songbird THg concentrations on a site-specific basis. Our findings suggest that Hg risk to riparian songbirds can extend beyond point-source contaminated areas, highlighting the importance of assessing exposure in surrounding habitats where methylmercury production may be elevated, such as reservoirs and wetlands.

Oregon

Documentation of data collection in Currituck Sound, North Carolina and Virginia, 2006-2007

During 2006 and 2007, scientists from Elizabeth City State University, North Carolina Estuarine Research Reserve, the U.S. Fish and Wildlife Service, and the U.S. Geological Survey collected hydrologic and water-quality data at nine sites in and around Currituck Sound. Hydrologic and water-quality data were collected at five tributary sites--the Northwest River near Moyock, Tull Creek near Currituck, and Intracoastal Waterway near Coinjock in North Carolina, and the Albemarle and Chesapeake Canal near Princess Anne, and the North Landing River near Creeds in Virginia. In addition, data were collected at one site at the mouth of Currituck Sound (Currituck Sound at Point Harbor, North Carolina). Only water-quality data were collected at three sites in Currituck Sound and Back Bay-Currituck Sound near Jarvisburg, and Upper Currituck Sound near Corolla in North Carolina, and Back Bay near Back Bay in Virginia. The hydrologic data included water elevation and velocity, and discharge. The water-quality data included discrete samples and continuous measurements of water temperature, specific conductance, dissolved oxygen, pH, turbidity, and chlorophyll a. The hydrologic and water-quality data collected for this study were quality assured by the U.S. Geological Survey and stored in the National Water Information System database. The data collected for this project are being used to develop an unsteady multidimensional hydrodynamic and water-quality model of Currituck Sound by the U.S. Army Corps of Engineers. The purpose of this model is to provide the basis for planning and the development of best-management practices and restoration projects for Currituck Sound and its tributaries.

North Carolina, Virginia

Twenty five years of Federal fishery research on the Great Lakes

The major purpose of this publication is to present an annotated bibliography of papers resulting from Federal investigations on the Great Lakes fish and fisheries since the formal initiation of a continuing research program by the Fish and Wildlife Service. It is believed that this purpose can be served best by prefacing that bibliography with a brief account of the origins of Great Lakes Fishery Investigations, of the circumstances that have guided their course, and of the scientists who have participated in the several studies.

Special Scientific Report - Fisheries

Columbia River Basin dreissenid mussel monitoring forum workshop

To address actions identified in the Department of Interior’s “Safeguarding the West” strategy, the Pacific States Marine Fisheries Commission (PSMFC) and US Geological Survey (USGS) convened 43 invasive species coordinators and scientific experts June 5-6, 2018 in Portland, Oregon to assess the status of dreissenid monitoring efforts in the Columbia River Basin (CRB); identify key strengths and weaknesses of existing collaborative efforts to monitor for dreissenids; identify priority monitoring gaps foundational to dreissenid prevention efforts; and achieve consensus on a set of strategies to address those gaps and maintain a strong monitoring collaborative and framework moving forward. Prior to the workshop, two webinars were conducted to summarize how states and provinces are estimating and using metrics that describe dreissenid mussel introduction (i.e., the risk of mussels being introduced into a waterbody) and establishment (i.e., the risk of a mussel population becoming established after an introduction event). The goal of the webinars was to provide context to discussions at the Columbia River Basin Dreissenid Mussel Monitoring Forum. As part of the webinars expert practitioners, gave presentations that summarized the origins and basis for metrics typically used to characterize invasive species invasion risk. During the first webinar which was held on May 7, 2018, Dr. Bob McMahon, University of Texas at Arlington gave a presentation discussing factors affecting the establishment of dreissenid mussels. During the second webinar which was held on May 30, 2018, Samuel Fischer and Mark Lewis from the University of Alberta presented information on factors affecting the introduction of mussels. Presentations at the workshop were given to update participants on the status of dreissenid mussel monitoring in the Columbia River Basin. Staff from the US Army Corps of Engineers (ACOE), Bureau of Reclamation (BOR), USGS, Bureau of Indian Affairs (BIA), and National Park Service (NPS) gave presentations that described the status of dreissenid mussel monitoring efforts conducted by federal agencies. Participants also heard presentations on the status of other monitoring related efforts. Representatives from the Western Regional Panel and Montana Fish Wildlife and Parks (MFWP) presented information about method and protocol standardization coordination activities. Staff from the British Columbia Ministry of Environment and Climate Change Strategy also presented an update on their sampling and resource allocation protocols. The USGS then presented an overview of the evolution and status of dreissenid mussel monitoring in the CRB as well as summary of the results of webinars that addressed facets of dreissenid mussel introduction and establishment risk estimation. To facilitate learning from ongoing efforts that address similar invasive species coordination, monitoring, and research activities, Kelly Baerwaldt, US Fish and Wildlife Service (USFWS) presented remotely on the activities of the Asian Carp Coordinating Committee, informing workshop participants of the how the effort formed and is funded, priority goals and activities, as well as key successes and challenges. The meeting culminated with workshop attendees participating in four breakout groups (risk assessment and research, data/lab analysis, monitoring/coordination, and funding) to identify priority key gaps or weaknesses to existing monitoring/coordination efforts as well as identify priority actions or strategies could help address those gaps or weaknesses. The recommended priority actions from each breakout group were compiled into one overall recommendation to build on existing strengths and address weaknesses associated with monitoring for dreissenids in the Columbia River Basin: Using existing infrastructure and datasets, develop a transboundary, interagency, adaptive, coordinated, regional monitoring framework/partnership to ensure optimal resource allocation.

Conference Paper

Acid rain publications by the U.S. Fish and Wildlife Service, 1979-1989

Pollution of aquatic and terrestrial ecosystems has been a concern to society since the burning of fossil fuels began in the industrial revolution. In the past decade or so, this concern has been heightened by evidence that chemical transformation in the atmosphere of combustion by-products and subsequent long-range transport can cause environmental damage in remote areas. The extent of this damage and the rates of ecological recovery were largely unknown. "Acid rain" became the environmental issue of the 1980's. To address the increasing concerns of the public, in 1980 the Federal government initiated a 10-year interagency research program to develop information that could be used by the President and the Congress in making decisions for emission controls. The U.S. Fish and Wildlife Service has been an active participant in acid precipitation research. The Service provided support to a number of scientific conferences and forums, including the Action Seminar on Acid Precipitation held in Toronto, Canada, in 1979, an international symposium on Acidic Precipitation and Fishery Impacts in Northeastern North America in 1981, and a symposium on Acidic Precipitation and Atmospheric Deposition: A Western Perspective in 1982. These meetings as well as the growing involvement with the government's National Acidic Precipitation Assessment Program placed the Service in the lead in research on the biological effects of acidic deposition. Research projects have encompassed water chemistry, aquatic invertebrates, amphibians, fish, and waterfowl. Water quality surveys have been conducted to help determine the extent of acid precipitation effects in the northeast, Middle Atlantic, and Rocky Mountain regions. In addition to lake and stream studies, research in wetland and some terrestrial habitats has also been conducted. Specific projects have addressed important sport species such as brook trout (Salvelinus fontinalis), Atlantic salmon (Salmo salar), and striped bass (Morone saxatilis). Trace metal accumulation in fish has been investigated and a symposium sponsored on related work. U.S> Fish and Wildlife Service scientists serve as advisors and participants in research being conducted by industry, nonprofit groups, State and other Federal agencies. Researcher have worked closely with colleagues in Canada, England, Norway, Scotland, the Soviet Union, and Sweden to gain additional understanding of the problem. In 1982, the Service implemented a mitigation research program to provide resource managers with information to help them protect sensitive ecosystems, and rehabilitation methods for resources already affected by acidification. An international workshop was convened to outline the research needs. Several conferences were organized to develop appropriate field and laboratory procedures. Scientists with the mitigation research program are evaluating the ecological effects of liming (addition of base material) surface waters and surrounding watershed to provide buffering against acidic inputs. Through long-term cooperative project with States and other organizations, investigations are studying possible abatement methods for regions most affected by acidic deposition. To date, more than 200 reports the describe these studies have been published. These products include conference proceedings, journal articles, and in-house scientific publications. An education poster describing the effects of acid rain on aquatic ecosystems was developed and distributed to individuals, conservations and State organizations, and the public education system. This annotated bibliography lists current publications by Service authors, cooperators, or contractors on acid rain and related quality. Entire are arranged alphabetically by author surname. For further information about the research program, contact the U.S. Fish and Wildlife Service, Acid Precipitation Section, National Fishery Research Center -- Leetown, Box 700, Kearneysville, WV 25430.

Biological Report

U.S. Geological Survey, National Wildlife Health Center, 2011 report of selected wildlife diseases

The National Wildlife Health Center (NWHC) was founded in 1975 to provide technical assistance in identifying, controlling, and preventing wildlife losses from diseases, conduct research to understand the impact of diseases on wildlife populations, and devise methods to more effectively manage these disease threats. The impetus behind the creation of the NWHC was, in part, the catastrophic loss of tens of thousands of waterfowl as a result of an outbreak of duck plague at the Lake Andes National Wildlife Refuge in South Dakota during January 1973. In 1996, the NWHC, along with other Department of Interior research functions, was transferred from the U.S. Fish and Wildlife Service to the U.S. Geological Survey (USGS), where we remain one of many entities that provide the independent science that forms the bases of the sound management of the Nation’s natural resources. Our mission is to provide national leadership to safeguard wildlife and ecosystem health through dynamic partnerships and exceptional science. The main campus of the NWHC is located in Madison, Wis., where we maintain biological safety level 3 (BSL–3) diagnostic and research facilities purposefully designed for work with wildlife species. The NWHC provides research and technical assistance on wildlife health issues to State, Federal, and international agencies. In addition, since 1992 we have maintained a field station in Hawaii, the Honolulu Field Station, which focuses on marine and terrestrial natural resources throughout the Pacific region. The NWHC conducts diagnostic investigations of unusual wildlife morbidity and mortality events nationwide to detect the presence of wildlife pathogens and determine the cause of death. This is also an important activity for detecting new, emerging and resurging diseases. The NWHC provides this crucial information on the presence of wildlife diseases to wildlife managers to support sound management decisions. The data and information generated also allows for further indepth analyses for determining the biological and ecological significance of disease events, detecting disease trends over time and space, as well as detecting any significant changes to how diseases manifest in the field. Moreover, this information allows us to gain insight into the significance of future wildlife disease events. The purpose of this report is to provide a sample of NWHC data that are available from our Laboratory Information Management System (LIMS). These data are presented in summary format with minimal statistical analysis and interpretation. The goal is to share these data with wildlife managers and other stakeholders, promote the use of NHWC data, and encourage the sharing of wildlife disease data to improve temporal and geographic surveillance coverage. Continued national surveillance for wildlife diseases is essential for providing early detection and warning of events that have the potential to result in harm to human health, economic losses, declines in wildlife populations, and subsequent ecological disturbances. Increased collaboration, coordination, and sharing of surveillance data will enhance this Nation’s ability to detect and respond to wildlife disease threats.

Scientific Investigations Report

Analytical assessments in support of the U.S. Fish and Wildlife Service 3-bat species status assessment

Beginning in February of 2020, researchers and staff of the United States Geological Survey (USGS), Bat Conservation International (BCI), Virginia Polytechnic Institute and State University, and Montana State University associated with the North American Bat Monitoring Program (NABat) collaborated with the United States Fish and Wildlife Service (USFWS) to provide technical assistance in support of the USFWS Three Bat Species Status Assessments (SSA) including the little brown bat (MYLU, Myotis lucifugus), northern long-eared bat (MYSE, Myotis septentrionalis), and tricolored bat (PESU, Perimyotis subflavus). Analytical support for the SSA was not intended to provide interpretive results, which should therefore be considered beyond the scope of this report. Technical assistance for the SSA included facilitating the USFWS data call by educating and working directly with data contributors to manage, submit, and archive a variety of bat monitoring data in the online NABat database1 using standardized data submission templates accessible through the upload features on the NABat website. Most data collected through the USFWS data call for the SSA were submitted and stored in the NABat database. These represent the efforts of hundreds of partnering organizations across more than 200 individual NABat Partner Portal Projects. A few organizations contributed data for use in these analyses that were not submitted to the NABat database. Records submitted in response to the USFWS data call included bat capture, stationary and mobile acoustic, and internal roost count data (winter and summer). Data collated in the NABat database and used for the analyses described herein are documented (NABat 2020a, NABat 2020b, NABat 2021) and available through the NABat third party request feature.

Report

Modeling Climate Change and Sturgeon Populations in the Missouri River

The U.S. Geological Survey (USGS) Columbia Environmental Research Center (CERC), in collaboration with researchers from the University of Missouri and Iowa State University, is conducting research to address effects of climate change on sturgeon populations (Scaphirhynchus spp.) in the Missouri River. The CERC is conducting laboratory, field, and modeling research to identify causative factors for the responses of fish populations to natural and human-induced environmental changes and using this information to understand sensitivity of sturgeon populations to potential climate change in the Missouri River drainage basin. Sturgeon response information is being used to parameterize models predicting future population trends. These models will provide a set of tools for natural resource managers to assess management strategies in the context of global climate change. This research complements and builds on the ongoing Comprehensive Sturgeon Research Program (CSRP) at the CERC. The CSRP is designed to provide information critical to restoration of the Missouri River ecosystem and the endangered pallid sturgeon (S. albus). Current research is being funded by USGS through the National Climate Change Wildlife Science Center (NCCWSC) and the Science Support Partnership (SSP) Program that is held by the USGS and the U.S. Fish and Wildlife Service. The national mission of the NCCWSC is to improve the capacity of fish and wildlife agencies to respond to climate change and to address high-priority climate change effects on fish and wildlife. Within the national context, the NCCWSC research on the Missouri River focuses on temporal and spatial downscaling and associated uncertainty in modeling climate change effects on sturgeon species in the Missouri River. The SSP research focuses on improving survival and population estimates for pallid sturgeon population models.

Fact Sheet

Toxicity of five forest insecticides to cutthroat trout and two species of aquatic invertebrates

The Northern Rocky Mountain region has had scattered infestation of the western spruce budworm Christoneura occidentalis since the early 1900's (U.S. DEPARTMENT OF AGRICULTURE (USDA) 1976b). On the basis of aerial surveys in 1975, TUNNOCK et al. (1976), estimated that budworm defoliation occurred on 2,278,804 acres of six National Forests in Montana. Since the use of DDT was banned in 1972, there has been a need to develop alternative insecticides with the efficacy of DDT but without its environmental risk. These insecticides must be effective in controlling the budworm, but should not persist in the environment or be toxic to other organisms. The organophosphate and carbamate insecticides are relatively nonpersistent and generally present only a moderate hazard to fish when applied according to label recommendations. The USDA Forest Service has been investigating the effectiveness of these two classes of insecticides against the budworm, and the Columbia National Fisheries Research Laboratory of the U.S. Fish and Wildlife Service has been cooperating with the Forest Service conducted pilot control projects in eastern Montana in 1975 and 1976 to determine the efficacy and environmental impact of acephate, carbaryl, and trichlorfon in controlling the western budworm (USDA 1976 b). In 1975, a similar type project was carried out in Maine with aminocarb, fenitrothion, and trichlorfon (USDA 1976 a). Acephate, fenitrothion, and trichlorfon (organophosphate insecticides) and aminocarb and carbaryl (carbamate insecticides) were selected for toxicity tests against cutthroat trout ( Salmo clarki ), a stonefly ( Pteronarcella badia ), and a freshwater amphipod ( Gammarus pseudolimnaeus ) edemic in streams of the northern Rocky Mountains. Populations of cutthroat trout inhabit lakes and streams in the Rocky Mountains which include some of the most pristine habitat and fisheries in North America. Pteronarcella and Gammarus provide forage for cutthroat trout and feed on decaying vegetation in riffle areas in streams and rivers. Stonefly naiads and amphipods were selected as test organisms because of their importance as trout food and their wide distribution in mountain stream communities. We determined the effect of various water types representing different biogeographical areas in the Intermountain West on the toxicity of these five forest insecticides.

Bulletin of Environmental Contamination and Toxico

Rodent repellents

Why rodent repellents are needed, how they are tested, and what ones are showing promise. Some of the best ones now known are too toxic, too costly, or both.

Latest report on U. S. Fish and Wildlife Service r

User's guide to the wetland creation/restoration data base, version 2

Wetland creation or restoration projects are frequently proposed as mitigation for unavoidable wetland losses, as components of wetland enhancement programs, and as tools to accomplish specific objectives such as waterfowl production or flood control. There is considerable controversy concerning the effectiveness of such projects as well as the most appropriate and efficient techniques to employ. The importance of the resource and the long time scales involved in fully evaluating a creation or restoration effort make it imperative to consider existing information as fully as possible in the development and evaluation of wetland creation or restoration proposals. To aid in the evaluation of wetland/creation efforts, the U.s. Fish and Wildlife Service (FWS), National Ecology Research Center, has developed the Wetland Creation/Restoration (WCR) Data Base. The data base is a highly indexed or keyworded bibliography of wetland creation or restoration articles. ("Articles" refers to any type of publication that deals specifically with wetland creation/restoration projects or studies.) The scope of the articles is international, although most of them are concerned with projects conducted in the United States. Information coded for each article includes author; citation; type of wetland and its location in terms of state, ecoregion, and FWS region; type of study undertaken; objectives in creating or restoring the wetland; actions performed to realize those objectives; length of time encompassed by the study; evaluation of results and responses to the wetland creation/restoration actions; and a listing of plant species significant to the project. A brief annotation summarizes the article and includes any significant additional information that may not be adequately reflected in the above described fields. Many of these articles describe only one or two components of a total wetland restoration effort. Planning a project that is designed to restore a wetland system (including at least some of its functions) is similar to constructing a picture from a number of puzzle pieces--missing pieces represent data gaps or information that is not available. Articles range from specific case studies, to overviews of restoration methods and techniques, to planning restoration projects and assessing programmatic and administrative backgrounds and interactions. In this data base, the term "restoration" is applied loosely to include rehabilitation of wetlands. It may refer to a number of situations or actions including, but not limited to: 1. breaching dikes or plugging drains; 2. water pollution clean-up; 3. conversion of eutrophic conditions; 4. wastewater treatment; 5. recolonization of previously disturbed or denuded areas; 6. amelioration of adverse conditions (erosion, wave, or wind action); 7. soil treatment --mulching, fertilization; 8. rerouting streams --may include construction of meander patterns; 9. monitoring natural vegetation; or 0. excluding grazers (geese, cattle) and monitoring results. This report describes the format and content of Version 2 of the WCR data base. Version 2 differs from the previous version described in SchnellerMcDonald et al. (1988): several fields have been dropped and condensed and new records have been added. Version 2 includes all records distributed with the earlier version and its updates. We recommend you replace any previous version with Version 2.

Book

Local sea level rise information sheets for Texas, Louisiana, Mississippi, Alabama and Florida

Two Pagers for Federally Managed Lands The Northern Gulf of Mexico Sentinel Site Cooperative partnered with individuals at the U.S. Geological Survey’s Wetland and Aquatic Research Center and the U.S. Fish and Wildlife Service to produce customized two-pager information sheets for federal coastal refuges, parks, and reserves across the northern Gulf of Mexico (i.e., sea-level rise sensitive federally-managed lands within Texas, Louisiana, Alabama, Mississippi, and Florida). The project was funded by the Department of the Interior Southeast Climate Adaptation Science Center, and the project team included Bogdan Chivoiu (Cherokee Nation Technologies at USGS), Michael Osland (USGS), Renee Collini (Northern Gulf of Mexico Sentinel Site Cooperative), Sara Martin (Northern Gulf of Mexico Sentinel Site Cooperative), Benjamin Wilson (NAS Science Policy Fellow at USFWS) and John Tirpak (USFWS). The project team is grateful to the many individuals that provided helpful comments on earlier drafts of these two pagers.

Texas, Louisiana, Mississippi, Alabama, Florida

Electrophoresis as a management tool

The theme of this 1974 Northeast Fish and Wildlife Conference is 'A New Era'. Indeed, it is a new era for improved techniques to assist in management of our fish and wildlife resources for the maximum benefit of all. In some cases, the new techniques are primarily used in research.on fish and wildlife, and the results from the research are used to aid management and enforcement agencies in the decision-making process. One of the newer techniques that is being applied to problems in fisheries and wildlife is electrophoresis. In this paper, we review briefly the techniques of electrophoresis and illustrate research problems in wildlife and fisheries where the use of electrophoresis is now assisting or may potentially aid in management decisions.

Transactions of the Northeast Fish and Wildlife Co

Seventy-five years of science—The U.S. Geological Survey’s Western Fisheries Research Center

As of January 2010, 75 years have elapsed since Dr. Frederic Fish initiated the pioneering research program that would evolve into today’s Western Fisheries Research Center (WFRC). Fish began his research working alone in the basement of the recently opened Fisheries Biological Laboratory on Lake Union in Seattle, Washington. WFRC’s research began under the aegis of the U.S. Fish and Wildlife Service and ends its first 75 years as part of the U.S. Geological Survey with a staff of more than 150 biologists and support personnel and a heritage of fundamental research that has made important contributions to our understanding of the biology and ecology of the economically important fish and fish populations of the Nation. Although the current staff may rarely stop to think about it, WFRC’s antecedents extend many years into the past and are intimately involved with the history of fisheries conservation in the Western United States. Thus, WFRC Director Lyman Thorsteinson asked me to write the story of this laboratory “while there are still a few of you around who were here for some of the earlier years” to document the rich history and culture of WFRC by recognizing its many famous scientists and their achievements. This historyalso would help document WFRC’s research ‘footprint’ in the Western United States and its strategic directions. Center Director Thorsteinson concluded that WFRC’s heritage told by an emeritus scientist also would add a texture of legitimacy based on personal knowledge that will all-to-soon be lost to the WFRC and to the USGS. The WFRC story is important for the future as well as for historical reasons. It describes how we got to the place we are today by documenting the origin, original mission, and our evolving role in response to the constantly changing technical information requirements of new environmental legislation and organizational decision-making. The WFRC research program owes its existence to the policy requirements of Federal conservation legislation originating with the construction of Grand Coulee Dam in 1933. The research program was shaped by laws enacted in subsequent years such as the Federal Water Pollution Control Act (1972), National Environmental Policy Act (1973), Endangered Species Act (1974), and Northwest Power Planning Act (1980), to name only a few. The WFRC has not been constrained by direct management or regulatory responsibility for a particular fishery (such as providing sustainable catch limits data to a resource management structure). Thus, WFRC has been able to concentrate on scientific pursuits and information needs required by contemporary environmental legislation. Over the years, we have pioneered in several important areas of fisheries research including the diagnoses and control of diseases in economically important fish, effects of environmental alterations on the physiological quality and survival of Pacific salmon released from federal mitigation hatcheries, applications in biotelemetry, and the bioenergetics of predator-prey interactions in the Columbia River. The WFRC of today is a widely distributed organization in the Western United States. Knowledge of the historical connections and accomplishments of our predecessors is important beyond the sense of pride and unity it instills in the WFRC family of today. For example, a discerning reader will note the evolution of WFRC’s research from a single disciplinary focus (early era—hatchery disease problems), to multiple disciplines (middle to late era—species, populations, habitats; threatened and endangered species), to the present era (multidisciplinary and with increasing process focus). For the benefit of the current WFRC staff, more emphasis has been placed on the early years rather than on the present day because people are quite naturally more familiar with the recent past than with the research done during the first decades of WFRC’s existence. By every rational measure, the WFRC has evolved into a fisheries research organization well positioned to provide the biological information needed to support the continued conservation and management of our Nation’s living aquatic natural resources. The high standard of excellence that connects WFRC’s past to our present research program provides a firm foundation on which to base the work yet to be done. In another 75 years, WFRC will undoubtedly be a very different place than it is today, but its evolution will be forever rooted in the story of the research and of the people related here. More about the diverse fisheries research projects WFRC scientists are conducting today is available at WFRC’s website: http://wfrc.usgs.gov/.

Washington

Wind River Subbasin Restoration, annual report of U.S. Geological Survey activities: Parr monitoring and instream passive integrated transponder detection, January 1, 2015 – December 31, 2015

We used Passive Integrated Transponder (PIT)-tagging and a series of instream PIT-tag interrogation systems (PTIS) to investigate life-histories, populations, and efficacy of habitat restoration actions for steelhead Oncorhynchus mykiss in the Wind River subbasin, WA. Our tagging focused on parr in headwater areas of the subbasin and our PTISs provide information on movement of these parr, which is primarily, but not exclusively downstream. The PTISs also provide data on life-history aspects of other steelhead life-stages. The Wind River subbasin in southwest Washington State provides habitat for a population of wild Lower Columbia River steelhead and is an excellent watershed for long-term studies of population dynamics and responses to restoration of this wild population. Much data on steelhead population metrics have been gathered from the Wind River providing information on habitat restoration actions and ongoing research into steelhead life histories. Additionally, the Wind River is an excellent control watershed of an exclusivly wild steelhead population to which basins with hatchery programs can compare. No hatchery steelhead have been planted in the Wind River subbasin since 1994, and hatchery adults are estimated to be less than one percent of adults in any year (pers comm. Thomas Buehrens, Washington Department of Fish and Wildlife). Numerous restoration actions have been implemented in the subbasin, including the removal of Hemlock Dam on Trout Creek in 2009. Data from our study, and companion work by Washington Department of Fish and Wildlife (WDFW), will contribute to Bonneville Power Administration’s (BPA) Research Monitoring and Evaluation (RM&E) Program Strategy of Fish Population Status Monitoring (www.cbfish.org/ProgramStrategy.mvc/ViewProgramStrategySummary/1), specifically the sub-strategies of: 1) Assessing the Status and Trends of Diversity of Natural Origin Fish Populations and to uncertainties research regarding differing life histories of a wild steelhead population, 2) Assessing the Status and Trend of Adult Natural Origin Fish Populations, and 3) Monitoring and Evaluating the Effectiveness of Tributary Habitat Actions Relative to Environmental, Physical, or Biological Performance Objectives. During summer 2015, we sampled and PIT-tagged age-0 and age-1 steelhead parr in headwater areas of the Wind River subbasin to characterize population traits and investigate variable life-histories, including growth and parr movement downstream prior to smolting. Throughout the year, we maintained a series of instream PTISs to monitor movement of tagged steelhead parr, smolts, and adults. Detections at the instream PTISs showed trends of parr 8 emigration during summer and fall, in addition to the expected movement of parr and smolts in spring. These data are increasing our understanding of varied life histories of juvenile steelhead; paired with other steelhead population work in the subbasin we hope to better understand the factors influencing parr movements. Monitoring of PIT-tagged fish over multiple years is providing information on contribution of various life-history strategies to smolt production and adult returns, as well as identifying factors influencing parr movement. Movements of PIT-tagged adult steelhead were also monitored with our instream PTISs. These data have provided information on timing of adult movements to various parts of the watershed, which allows us to assess adult returns to tributary watersheds within the Wind River subbasin. Determination of adult use of tributary watersheds is providing data to contribute to evaluation of the efficacy of the removal of Hemlock Dam on Trout Creek. Hemlock Dam, located at rkm 2.0 of Trout Creek was removed in summer 2009 and had contributed to hydrologic impairment of Trout Creek. Evaluating restoration efforts is of interest to many managers and agencies so that funding and time are allocated for best results. The evaluation of various life-his

Washington

The Wetland and Aquatic Research Center strategic science plan

Introduction The U.S. Geological Survey (USGS) Wetland and Aquatic Research Center (WARC) has two primary locations (Gainesville, Florida, and Lafayette, Louisiana) and field stations throughout the southeastern United States and Caribbean. WARC’s roots are in U.S. Fish and Wildlife Service (USFWS) and National Park Service research units that were brought into the USGS as the Biological Research Division in 1996. Founded in 2015, WARC was created from the merger of two long-standing USGS biology science Centers—the Southeast Ecological Science Center and the National Wetlands Research Center—to bring together expertise in biology, ecology, landscape science, geospatial applications, and decision support in order to address issues nationally and internationally. WARC scientists apply their expertise to a variety of wetland and aquatic research and monitoring issues that require coordinated, integrated efforts to better understand natural environments. By increasing basic understanding of the biology of important species and broader ecological and physiological processes, this research provides information to policymakers and aids managers in their stewardship of natural resources and in regulatory functions. This strategic science plan (SSP) was developed to guide WARC research during the next 5–10 years in support of Department of the Interior (DOI) partnering bureaus such as the USFWS, the National Park Service, and the Bureau of Ocean Energy Management, as well as other Federal, State, and local natural resource management agencies. The SSP demonstrates the alignment of the WARC goals with the USGS mission areas, associated programs, and other DOI initiatives. The SSP is necessary for workforce planning and, as such, will be used as a guide for future needs for personnel. The SSP also will be instrumental in developing internal funding priorities and in promoting WARC’s capabilities to both external cooperators and other groups within the USGS.

Open-File Report

Wind River subbasin restoration: Annual report of US..Geological Survey activities, January 2018 through December 2018

We sampled juvenile wild Steelhead Oncorhynchus mykiss in headwater streams of the Wind River, WA, to characterize populations and investigate life-history metrics, particularly migratory patterns. We used Passive Integrated Transponder (PIT)-tagging and a series of instream PIT-tag interrogation systems (PTISs) to track juveniles. The Wind River subbasin is considered a wild Steelhead refuge by Washington Department of Fish and Wildlife (WDFW). No hatchery Steelhead have been planted in the Wind River subbasin since 1997, and hatchery adults are estimated to be less than one percent of spawners in most years (pers comm. Thomas Buehrens, Washington Department of Fish and Wildlife). Our repeated headwater sampling of consistent sites in the Wind River subbasin has also allowed us to track relative abundance of Brook Trout, a non-native species to the Wind River. Our work is contributing to understanding of Steelhead population response to numerous restoration actions in the subbasin, including removal of Hemlock Dam from Trout Creek in 2009, where our PTISs are helping to quantify adult response. Data from our study, and companion work by Washington Department of Fish and Wildlife, are contributing to Bonneville Power Administration’s (BPA) Research Monitoring and Evaluation (RM&E) Program Strategy of Fish Population Status Monitoring (www.cbfish.org/ProgramStrategy.mvc/ViewProgramStrategySummary/1). Specifically this work addresses the sub-strategies of: 1) Assessing the Status and Trends of Diversity of Natural Origin Fish Populations and to Uncertainties Research regarding differing life histories of a wild Steelhead population, 2) Assessing the Status and Trend of Adult Natural Origin Fish Populations, and 3) Monitoring and Evaluating the Effectiveness of Tributary Habitat Actions Relative to Environmental, Physical, or Biological Performance Objectives. Our headwaters parr PIT tagging, WDFW parr, smolt, and adult tagging and our instream PTISs are providing data on movements and life histories of parr, smolt, and adult Steelhead. During summer 2018, we PIT-tagged 1,592 age-0 and age-1 Steelhead parr in headwater areas of the Wind River subbasin to characterize population traits and investigate life-history diversity, including growth and pre-smolt downstream movement. Repeat headwater sampling and smolt trap operations provide opportunities for recapture, and instream PTISs and Columbia River infrastructure provide opportunity for detection of PIT-tagged fish. Throughout the year, we maintained a series of six instream PTISs to monitor movement of tagged Steelhead parr, smolts, and adults. Detections at the instream PTISs have demonstrated trends of age-0 and age-1 parr emigration from natal areas during summer and fall, in addition to the expected movement of parr and smolts in spring. Substantial numbers of parr make downstream movements as age-1 fish. We have estimated that from 15 to 33 percent of parr tagged as age-0 fish make downstream migrations at age-1 for additional rearing. We have estimated that from 1 to 27 percent of parr tagged as age-1 fish make downstream migrations during fall. These findings raise many questions about parr rearing strategies, habitat use, and success of these migrants and suggest a need for broader monitoring of juvenile Steelhead in some river systems to fully document juvenile production. Long-term monitoring of PIT-tagged fish is providing information on contribution of various life-history strategies to smolt production and adult returns. Movements of PIT-tagged adult Steelhead were recorded at instream PTISs. These data have allowed assessment of adult returns to tributary watersheds within the Wind River subbasin. Detection efficiency of adult PIT-tagged Steelhead at our primary adult-monitoring PTIS in Trout Creek has been greater than 92 percent during 6 of the past 7 years. This is providing excellent data to estimate adult returns to this watershed. Determination of adult use of tributary watersheds is providing data to help evaluate the efficacy of the removal of Hemlock Dam on Trout Creek. Hemlock Dam, located at rkm 2.0 of Trout Creek, was removed in summer 2009. The dam contributed to hydrologic impairment of Trout Creek and had potential negative effects on Steelhead. The improvements made to the upper Wind River PTIS (site code WRU at rkm 28.3; better site characteristics and grid power) during 2016 and 2017, and a planned new site in the Mine Reach of the upper Wind River, will allow estimates of subbasin adult escapement like those in Trout Creek. During 2018, we also completed planning and permitting with U.S. Forest Service for a new PTIS site at rkm 36 of the Wind River (the Mine Reach, mentioned above). This site will replace two sites (one in Paradise Creek and one at rkm 41 of the Wind River), which had operational challenges due to lack of adequate solar power and winter difficulties. The new Mine Reach PTIS site at rkm 36, will have better solar exposure, fewer winter operations difficulties, and provide opportunity to detect fish from juvenile sampling sites that were downstream of the previous two PTISs. The more consistent operation of the new Mine Reach PTIS site will increase our ability to estimate migrant abundance as all the juveniles tagged upstream of it will be subject to the same potential detection history, instead of three different potential detection histories as before. Additionally, with the new Mine Reach PTIS site lower in the watershed, it will subject more PIT-tagged adult Steelhead to detection and provide ability to generate a nonbiased adult-detection efficiency estimate for the WRU PTIS at rkm 28.3 of the Wind River. This will provide the opportunity to estimate yearly adult Steelhead abundance to the upper Wind watershed area. Permitting is complete and some supplies have been purchased to build and install this new site in 2019. Repeat sampling at consistent locations in the subbasin has allowed investigation into juvenile Steelhead growth patterns. Growth rates (relative change in weight) of age-0 PIT-tagged parr during summer are similar across the subbasin, but lower for age-1 parr in the Trout Creek watershed than the upper Wind River watershed. Yearly growth for parr tagged at age-0 is similar across the subbasin. Yearly growth for parr tagged at age-1 is lowest in Martha Creek, but similar elsewhere. Non-native Brook Trout are present in portions of the subbasin, chiefly the Trout Creek watershed, and repeat sampling has allowed us to index their prevalence. Percentage of catch that is Brook Trout at each of four sample sites in Trout Creek have declined from the period 1998 – 2003 to the period 2011 – 2018. There was a pattern of decline in percent of catch and number of Brook Trout at the Trout Creek sites from 2011 through 2016, though a slight upward trend during 2017 and 2018 has been evident. Evaluating and planning restoration efforts are of interest to many managers and agencies to ensure efficient use of resources. The evaluation of various life-histories of Steelhead within the Wind River subbasin will provide information to better track populations, and to direct habitat restoration and water allocation planning. Movement of Steelhead parr raises many questions regarding estimating juvenile abundance, origin, and habitat use within watersheds. Improved PTISs and focused PIT tagging of age-0 and age-1 Steelhead parr are increasingly allowing us to investigate such questions. Increasingly detailed Viable Salmonid Population information, such as that provided by PIT-tagging and instream PTISs networks like those in the Wind River subbasin, provide data to inform policy and management, as life-history strategies and production bottlenecks are identified and understood.

Washington