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At least 109 records · Page 6Linked to original sources

Online-coupling of widely-ranged timescales to model coral reef development

The increasing pressure on Earth's ecosystems due to climate change is becoming more and more evident and the impacts of climate change are especially visible on coral reefs. Understanding how climate change interacts with the physical environment of reefs to impact coral growth and reef development is critically important to predicting the persistence of reefs into the future. In this study, a biophysical model was developed including four environmental factors in a feedback loop with the coral's biology: (1) light; (2) hydrodynamics; (3) temperature; and (4) pH. The submodels are online coupled, i.e. regularly exchanging information and feedbacks while the model runs. This ensures computational efficiency despite the widely-ranged timescales. The composed biophysical model provides a significant step forward in understanding the processes that modulate the evolution of coral reefs, as it is the first construction of a model in which the hydrodynamics are included in the feedback loop.

Environmental Modeling and Software

Analysis of multiple enteric viral targets as sewage markers in coral reefs

Water and coral mucus samples were collected from throughout the Florida Keys National Marine Sanctuary and the Dry Tortugas for three years and were analyzed for human enteric viruses (enteroviruses, noroviruses, hepatitis A virus and adenoviruses) as conservative markers of human sewage using molecular methods. Of the 100 coral and water samples collected, 40 contained genetic material from one or more human enteric viruses. DNA-based adenoviruses were detected widely, in 37.8% of samples and at 91% of stations, including ‘pristine’ reefs in the Dry Tortugas; however, the detection rate was ⩽12% for the RNA-based enteroviruses and noroviruses (hepatitis A virus was never detected). The disparity between the prevalence of RNA- and DNA-based viruses suggests the need for additional work to determine the utility of adenovirus as marker of human sewage.

Florida

Internal tides can provide thermal refugia that will buffer some coral reefs from future global warming

Observations show ocean temperatures are rising due to climate change, resulting in a fivefold increase in the incidence of regional-scale coral bleaching events since the 1980s; analyses based on global climate models forecast bleaching will become an annual event for most of the world’s coral reefs within 30–50 yr. Internal waves at tidal frequencies can regularly flush reefs with cooler waters, buffering the thermal stress from rising sea-surface temperatures. Here we present the first global maps of the effects these processes have on bleaching projections for three IPCC-AR5 emissions scenarios. Incorporating semidiurnal temperature fluctuations into the projected water temperatures at depth creates a delay in the timing of annual severe bleaching ≥ 10 yr (≥ 20 yr) for 38% (9%), 15% (1%), and 1% (0%) of coral reef sites for the low, moderate, and high emission scenarios, respectively; regional averages can reach twice as high. These cooling effects are greatest later in twenty-first century for the moderate emission scenarios, and around the middle twenty-first century for the highest emission scenario. Our results demonstrate how these effects could delay bleaching for corals, providing thermal refugia. Identification of such areas could be a factor for the selection of coral reef marine protected areas.

Scientific Reports

Heat-driven functional extinction of Caribbean Acropora corals from Florida's Coral Reef

In 2023, a record-setting marine heat wave triggered the ninth mass coral bleaching event on Florida’s Coral Reef (FCR). We examined spatial patterns of heat exposure along the ~560-kilometer length of FCR and the mortality of two ecologically important, critically endangered reef-building corals. Sea surface temperatures were ≥31°C for an average of 40.7 days, leading to heat exposures 2.2- to fourfold higher than all prior years on record. In the Florida Keys and Dry Tortugas, 97.8 to 100% of the Acropora palmata and Acropora cervicornis colonies died. Mortality was lower offshore southeast Florida (37.9%), reflecting cooler temperatures in this region. Since the late 1970s, multiple stressors had already reduced the ecological relevance of Acropora in Florida, but the 2023 heat wave marks their functional extinction from FCR.

Florida

Sedimentation processes in a coral reef embayment: Hanalei Bay, Kauai

Oceanographic measurements and sediment samples were collected during the summer of 2006 as part of a multi-year study of coastal circulation and the fate of terrigenous sediment on coral reefs in Hanalei Bay, Kauai. The goal of this study was to better understand sediment dynamics in a coral reef-lined embayment where winds, ocean surface waves, and river floods are important processes. During a summer period that was marked by two wave events and one river flood, we documented significant differences in sediment trap collection rates and the composition, grain size, and magnitude of sediment transported in the bay. Sediment trap collection rates were well correlated with combined wave-current near-bed shear stresses during the non-flood periods but were not correlated during the flood. The flood's delivery of fine-grained sediment to the bay initially caused high turbidity and sediment collection rates off the river mouth but the plume dispersed relatively quickly. Over the next month, the flood deposit was reworked by mild waves and currents and the fine-grained terrestrial sediment was advected around the bay and collected in sediment traps away from the river mouth, long after the turbid surface plume was gone. The reworked flood deposits, due to their longer duration of influence and proximity to the seabed, appear to pose a greater long-term impact to benthic coral reef communities than the flood plumes themselves. The results presented here display how spatial and temporal differences in hydrodynamic processes, which result from variations in reef morphology and orientation, cause substantial variations in the deposition, residence time, resuspension, and advection of both reef-derived and fluvial sediment over relatively short spatial scales in a coral reef embayment.

Marine Geology

St. Petersburg Coastal and Marine Science Center coral reef research

The U.S. Geological Survey (USGS) Coral Reef Ecosystem STudies (CREST) Project specifically addresses priorities identified in the 'Facing tomorrow's challenges' U.S. Geological Survey science in the decade 2007-2017' document (USGS, 2007). Research includes a blend of historical, monitoring, and process studies aimed at improving our understanding of the development, current status and function, as well as likely future changes in coral ecosystems. Topics such as habitat characterization and distribution, coral disease, and trends in biogenic calcification are major focus areas. We seek to increase the understanding of reef structure, ecological integrity, and responses to global change.

Fact Sheet

The 4.2 ka event, ENSO, and coral reef development

Variability of sea-surface temperature related to shifts in the mode of the El Niño–Southern Oscillation (ENSO) has been implicated as a possible forcing mechanism for the global-scale changes in tropical and subtropical precipitation known as the 4.2 ka event. We review records of coral reef development and paleoceanography from the tropical eastern Pacific (TEP) to evaluate the potential impact of the 4.2 ka event on coral reefs. Our goal is to identify the regional climatic and oceanographic drivers of a 2500-year shutdown of vertical reef accretion in the TEP after 4.2 ka. The 2500-year hiatus represents ∼40 % of the Holocene history of reefs in the TEP and appears to have been tied to increased variability of ENSO. When ENSO variability abated approximately 1.7–1.6 ka, coral populations recovered and vertical accretion of reef framework resumed apace. There is some evidence that the 4.2 ka event suppressed coral growth and reef accretion elsewhere in the Pacific Ocean as well. Although the ultimate causality behind the global 4.2 ka event remains elusive, correlations between shifts in ENSO variability and the impacts of the 4.2 ka event suggest that ENSO could have played a role in climatic changes at that time, at least in the tropical and subtropical Pacific. We outline a framework for testing hypotheses of where and under what conditions ENSO may be expected to have impacted coral reef environments around 4.2 ka. Although most studies of the 4.2 ka event have focused on terrestrial environments, we suggest that understanding the event in marine systems may prove to be the key to deciphering its ultimate cause.

Climate of the Past

The future of coral reefs in the US Virgin Islands: Is Acropora palmata more likely to recover than Montastraea annularis complex?

Coral diseases have played a major role in the degradation of coral reefs in the Caribbean, including those in the US Virgin Islands (USVI). In 2005, bleaching affected reefs throughout the Caribbean, and was especially severe on USVI reefs. Some corals began to regain their color as water temperatures cooled, but an outbreak of disease (primarily white plague) led to losses of over 60% of the total live coral cover. Montastraea annularis , the most abundant coral, was disproportionately affected, and decreased in relative abundance. The threatened species Acropora palmata bleached for the first time on record in the USVI but suffered less bleaching and less mortality from disease than M. annularis . Acropora palmata and M. annularis are the two most significant species in the USVI because of their structural role in the architecture of the reefs, the large size of their colonies, and their complex morphology. The future of the USVI reefs depends largely on their fate. Acropora palmata is more likely to recover than M. annularis for many reasons, including its faster growth rate, and its lower vulnerability to bleaching and disease.

Virgin Islands

Land-based sediment sources and transport to southwest Puerto Rico coral reefs after Hurricane Maria, May 2017 to June 2018

The effects of runoff from land on nearshore ecosystems, including coral reef communities, are influenced by both sediment supply and removal by coastal processes. Integrated studies across the land-sea interface describing sources and transport of terrestrial sediment and its nearshore fate allow reef protection initiatives to target key onshore and offshore areas. Geochemical signatures in the fine fraction of terrestrial sediment from watersheds in southwest Puerto Rico were determined by multivariate principal component analysis and used to identify terrestrial sources of sediment runoff to nearshore coral reefs. Sediment settling out of suspension at reefs was collected at approximately 2 month-long intervals in bottom-mounted sediment traps from May 2017 to June 2018, a period that included Hurricanes Irma and Maria. Bulk sediment accumulation rates in traps exceeded a 10 mg/cm 2 /d threshold found to stress corals at 5 of 7 reef sites throughout the 13 month-long study. Geochemical signatures showed that watersheds 10s km to the east were a predominant, year-round source of fine sediment to reefs offshore of Guánica Bay and could have introduced sediment-bound contaminants due to a higher degree of industrialization and urbanization than the local watershed. Sediment runoff from the local watershed appeared to be constrained to a narrow band close to shore. During the 2.5 months after Hurricanes Irma and Maria, bulk sediment accumulation rates increased substantially and fine sediment geochemical signatures were indicative of predominantly distal sources, except outside of the mouth of Guánica Bay, which was strongly impacted by local runoff. Mass wasting, sediment runoff, and coastal turbidity persisted for months after Hurricane Maria and could account for the appearance of a small fraction of geochemical variance from a distal sediment source that appeared in reef traps 4 months post-hurricane and persisted through the end of the study 9 months post-hurricane. Sediment geochemical sourcing in temporally resolved records from sediment traps showed how landscape-scale changes after a major hurricane affected both near-term and long-term sediment delivery to reef communities. In addition, the importance of fine sediment advection from distal sources indicates that successful reduction of land-based pressures on nearshore ecosystems will require cross-jurisdictional strategies.

Puerto Rico

Sea-level rise could overwhelm coral reefs

An assessment of the capacity of coral reefs to grow fast enough to keep up with projected rises in sea level finds that most reefs will fall behind if nothing is done to restore them.

Nature

Rebounds, regresses, and recovery: A 15-year study of the coral reef community at Pila‘a, Kaua‘i after decades of natural and anthropogenic stress events

Pila‘a reef on the north shore of Kaua‘i, Hawai‘i was subjected to a major flood event in 2001 that deposited extensive sediment on the reef flat, resulting in high coral mortality. To document potential recovery, this study replicated benthic and sediment surveys conducted immediately following the event and 15 years later. Coral cores were analyzed to determine coral growth rates and density. Our results suggest that significant reduction in terrigenous sediments has led to partial ecosystem recovery based on coral species and colony increases, more balanced size frequency distributions, improved coral condition, and enhanced coral recruitment despite lack of recovery of large dead coral colonies. However, within this 15-year period, episodic storms and a bleaching event impeded the recovery process, preventing full recovery and continuously threatening the coral reef community. As climate change progresses, the intensity and frequency of these disturbances are predicted to increase.

Hawaii

Holocene aggradation of the Dry Tortugas coral reef ecosystem

Radiometric age dating of reef cores acquired at the Dry Tortugas coral reef ecosystem (DTCRE) was merged with lidar topographic mapping to examine Holocene reef development linked to spatial variation in growth and erosion under the control of sea level. Analysis of variance of lidar topography confirmed the presence of three distinct terraces on all three major DTCRE banks (Loggerhead Bank, Garden Bank, and Pulaski Bank). Reef building on the middle terrace (T2) began atop Pleistocene edifices on Loggerhead Bank by 8.0 ka (thousands of years ago) and on Garden Bank by 7.2 ka at elevations of about −16.0 m and −11.9 m, respectively, relative to present mean sea level. Following this initiation at different elevations, T2 aggraded vertically on both banks at different rates during the early Holocene under foundering conditions until a highstand at 5.2 ka, resulting in a 2.21 m offset in present mean T2 elevation between these banks. Initiation of an upper terrace (T1) occurred on both Loggerhead Bank and Garden Bank in association with sea-level fall to a lowstand at near 4.8 ka. This upper terrace initiated on Garden Bank at about 5.0 ka and then grew upward at rate of 2.5 mm year −1 until approximately 3.8 ka . On Loggerhead Bank, the upper T1 terrace formed after 4.5 ka at a higher vertical aggradation rate of 4.1 mm year −1 , but at a lower elevation than on Garden Bank. Terrace T1 aggraded on Loggerhead Bank below the elevation of lowstands during late Holocene sea-level oscillation, and consequently erosion on Loggerhead Bank was minimal and likely limited to the crest of the upper terrace. In contrast, after 3.8 ka terrace T1 on Garden Bank likely tracked sea level and consequently underwent erosion when sea level fell to second, third and fourth lowstands at 3.3, 1.1, and 0.3 ka.

Florida

Management implications of fish trap effectiveness in adjacent coral reef and gorgonian habitats

A combination of visual census and trap sampling in St. John, USVI indicated that traps performed better in gorgonian habitat than in adjacent coral reef habitat. Although most families were seen more commonly in coral habitat, they were caught more often in gorgonian areas. Traps probably fished more effectively in gorgonian habitats, especially for migrating species, because traps provided shelter in the relatively topographically uniform environment of gorgonian dominated habitats. Recently, trap fishermen on St. John have been moving effort away from traditionally fished nearshore coral reefs and into a variety of more homogeneous habitats such as gorgonian habitat. Consequently, exploitation rates of the already over-harvested reef fish resources may be increasing. Reef fish managers and marine reserve designers should consider limiting trap fishing in gorgonian habitats to slow the decline of reef fisheries.

Environmental Biology of Fishes

Predictions of turbidity due to enhanced sediment resuspension resulting from sea-level rise on a fringing Coral Reef: Evidence from Molokai, Hawaii

Accelerating sea-level rise associated with global climate change will affect sedimentary processes on coral reefs and other shoreline environments by increasing energy and sediment resuspension. On reefs, sedimentation is known to increase coral stress and bleaching as particles that settle on coral surfaces interfere with photosynthesis and feeding, and turbidity induced by suspended sediment reduces incident light levels. Using relationships developed from observations of wave orbital velocity, water-surface elevation, and suspended-sediment concentration on a fringing reef flat of Molokai, Hawaii, predictions of the average daily maximum in suspended-sediment concentration increase from ~11 mg/l to ~20 mg/l with 20 cm sea-level rise. The duration of time concentrations exceeds 10 mg/l increases from 9 to 37. An evaluation of the reduction of wave energy flux through breaking and frictional dissipation across the reef flat shows an increase of ~80 relative to the present will potentially reach the shoreline as sea level increases by 20 cm. Where the shoreline exists on low, flat terrain, the increased energy could cause significant erosion of the shoreline. Considering the sediment budget, the sediment flux is predicted to increase and removal of fine-grained sediment may be expedited on some fringing reefs, and sediment in storage on the inner reef could ultimately be reduced. However, increased shoreline erosion may add sediment and offset removal from the reef flat. The shifts in sediment availability and transport that will occur as result of a modest increase in sea level have wide application to fringing coral reefs elsewhere, as well as other shoreline environments. ?? 2010 the Coastal Education & Research Foundation (CERF).

Journal of Coastal Research

A multiscale analysis of coral reef topographic complexity using lidar-derived bathymetry

Coral reefs represent one of the most irregular substrates in the marine environment. This roughness or topographic complexity is an important structural characteristic of reef habitats that affects a number of ecological and environmental attributes, including species diversity and water circulation. Little is known about the range of topographic complexity exhibited within a reef or between different reef systems. The objective of this study was to quantify topographic complexity for a 5-km x 5-km reefscape along the northern Florida Keys reef tract, over spatial scales ranging from meters to hundreds of meters. The underlying dataset was a 1-m spatial resolution, digital elevation model constructed from lidar measurements. Topographic complexity was quantified using a fractal algorithm, which provided a multi-scale characterization of reef roughness. The computed fractal dimensions ( D ) are a measure of substrate irregularity and are bounded between values of 2 and 3. Spatial patterns in D were positively correlated with known reef zonation in the area. Landward regions of the study site contain relatively smooth ( D ≈ 2.35) flat-topped patch reefs, which give way to rougher ( D ≈ 2.5), deep, knoll-shaped patch reefs. The seaward boundary contains a mixture of substrate features, including discontinuous shelf-edge reefs, and exhibits a corresponding range of roughness values (2.28 ≤ D ≤ 2.61).

Journal of Coastal Research

Increasing hypoxia on global coral reefs under ocean warming

Ocean deoxygenation is predicted to threaten marine ecosystems globally. However, current and future oxygen concentrations and the occurrence of hypoxic events on coral reefs remain underexplored. Here, using autonomous sensor data to explore oxygen variability and hypoxia exposure at 32 representative reef sites, we reveal that hypoxia is already pervasive on many reefs. Eighty-four percent of reefs experienced weak to moderate (≤153 µmol O 2 kg −1 to ≤92 µmol O 2 kg −1 ) hypoxia and 13% experienced severe (≤61 µmol O 2 kg −1 ) hypoxia. Under different climate change scenarios based on four Shared Socioeconomic Pathways (SSPs), we show that projected ocean warming and deoxygenation will increase the duration, intensity and severity of hypoxia, with more than 94% and 31% of reefs experiencing weak to moderate and severe hypoxia, respectively, by 2100 under SSP5-8.5. This projected oxygen loss could have negative consequences for coral reef taxa due to the key role of oxygen in organism functioning and fitness.

Nature Climate Change

Benthic habitat map of the U.S. Coral Reef Task Force Watershed Partnership Initiative Kā'anapali priority study area and the State of Hawai'i Kahekili Herbivore Fisheries Management Area, west-central Maui, Hawai'i

Nearshore areas off of west-central Maui, Hawai‘i, once dominated by abundant coral coverage, now are characterized by an increased abundance of turf algae and macroalgae. In an effort to improve the health and resilience of the coral reef system, the Kahekili Herbivore Fisheries Management Area was established by the State of Hawai‘i, and the U.S. Coral Reef Task Force selected the Kā‘anapali region as a priority study area. To support these efforts, the U.S. Geological survey mapped nearly 5 km 2 of sea floor from the shoreline to water depths of about 30 m. Unconsolidated sediment (predominantly sand) constitutes 65 percent of the sea floor in the mapped area. Reef and other hardbottom potentially available for coral recruitments constitutes 35 percent of the mapped area. Of this potentially available hardbottom, only 51 percent is covered with a minimum of 10 percent coral, and most is found between 5 and 10 m water depth.

Hawai'i

Waves, watersheds, and sediment in a coral reef embayment: Towards parsimonious models of accumulation and composition

High sedimentation rates can damage coral reef ecosystems. Sedimentation rates are controlled by both sediment loads from watersheds and resuspension by waves and associated circulation patterns, but the outcomes are system specific and difficult to predict. The percent terrigenous (non-organic and non-carbonaceous) material in sediment is also often used as an indicator of watershed influence, but its dynamics are poorly understood. Sediment accumulation rates, particle size, and percent terrigenous were monitored quasi-monthly for one year (March 2014-April 2015) at nine sites in a coral reef-fringed embayment in American Samoa, where an aggregate quarry had increased sediment loads to the coast but mitigation reduced loads during the monitored period. Gross and net sediment accumulation rates were measured using sediment traps and SedPods (pods), respectively. Gross accumulation rates exceeded thresholds for impacts on coral health during at least one collection period at most sites, with more exceedances on the northern reef where water residence times and sediment availability are higher and corals show signs of sediment stress. Percent terrigenous of coarse sediment was higher in the traps and pods compared with the surrounding benthic sediment, indicating that some of the terrigenous sediment was advected through the bay without accumulating on the reef. The 95th percentile of hourly wave energy density ( E 95 ) taken from a global wave model (WaveWatch 3) was the best predictor of gross accumulation rates of both total and carbonate sediment in a log-log regression at most ( n = 6) sites ( R 2 range 0.72-0.92), indicating a strong role of resuspension of benthic sediment. Gross accumulation rates of terrigenous sediment were not correlated with E 95 and only correlated with SSY at the site nearest the stream mouth, indicating that most terrigenous sediment was not from resuspended benthic material but rather from a consistent watershed source. Percent terrigenous decreased with increasing wave energy due to high accumulation rates of carbonates during periods of high wave energy. Detection of the impact of sediment mitigation at the quarry on sediment accumulation was complicated by low wave energy in the period following mitigation. The use of gross accumulation rates and percent terrigenous as indicators of the magnitude and sources of sediment accumulation over time needs to account for wave-induced resuspension, which can be modelled with a simple power function using inputs from a global wave model.

Estuarine, Coastal and Shelf Science