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At least 109 records · Page 6Linked to original sources

Periphyton communities in streams of the Ozark Plateaus and their relations to selected environmental factors

During August through September of 1993- 95, 83 periphyton samples were collected at 51 stream sites in the Ozark Plateaus. These sites were categorized into six land-use categories (20 forest, 18 agriculture, 10 mining, 1 urban, 1 urban/ mining, and 1 mix), based on land-use percentages in the basin upstream from the site. Results indicate that periphyton communities of riffles of Ozark streams are affected by natural and land-use related factors. These factors include nutrients, dissolved organic carbon, alkalinity, canopy shading, suspended sediment, embeddedness, stream morphometry, and velocity. For several measures of periphyton communities, statistically significant (p<0.05) differences were found among sites assigned to agriculture, forest, and mining categories. Blue-green algae biovolume, relative abundance of blue-green algae, relative biovolume of diatoms, relative abundance of oligotrophic algae, relative abundance of tolerant taxa, and condition index values were among the measures that differed among land-use categories. Although no environmental factors were significantly correlated with total biovolume, several factors were significantly correlated with biovolume of blue-green algae or biovolume of diatoms. Biovolume of blue-green algae was correlated with percent agriculture land use. Biovolume of diatoms was correlated with orthophosphate, total phosphorus, alkalinity, velocity, embeddedness, and dissolved organic carbon. Diatoms often composed the largest percentage of the biovolume (relative biovolume). Diatom relative biovolume was much higher at mining sites (generally 75 to 90 percent of the total biovolume) than at forest or agriculture sites (generally 15 to 80 percent) and was correlated with several factors, including many land-use related factors. The diatoms Cymbella affinis and Cymbella delicatula and the blue-green algae Calothrix often were the most common (relative abundance and relative biovolume) algae in samples. Detrended correspondence analysis (DCA) and hierarchical cluster analyses results indicated differences among land-use category sites. The DCA results were correlated with a number of land-use related factors and channel morphometry. Grazers (specifically, snails and stonerollers) are related to periphyton biovolume and community composition. Total periphyton and diatom biovolume typically were highest at sites where snail density was lowest. Lower relative abundances of diatoms usually occurred at sites with higher snail densities and stoneroller relative abundances.

Arkansas, Kansas, Missouri, Oklahoma

Algal conditions in the Caloosahatchee River (1975-79), Lake Okeechobee to Franklin Lock, Florida

Maximum numbers of suspended algae occurred in late spring and early summer, in each of the years 1975-79, in the Caloosahatchee River. Numbers exceeded 100,000 cells per milliliter at all stations sometime during the study. Concentrations decreased during late summer and autumn and were low during winter, except in January 1979 when numbers at most sites exceeded 100,000 cells per milliliter. The January 1979 bloom coincided with large discharges from Lake Okeechobee. During previous winters, discharges and algal numbers were lower. During other seasons, algal blooms occurred most frequently under low-flow or stagnant conditions. The upstream site at Moore Haven, which had the least discharge and was most stagnant, had consistently higher algal concentrations than downstream sites. Blue-green algae were dominant in the river during the summer at the upstream site throughout the year. The percentage of blue-green algae decreased downstream. Concentrations of nitrite plus nitrate nitrogen were inversely correlated with concentrations of algae and decreased to near zero during algal blooms. The low concentrations of these forms of inorganic nitrogen relative to other major nutrients probably favor blue-green algae and limit growth of other algae. Contributions by the basin tributaries to the nutritive condition of the river were small because concentrations of nutrients, algal growth potential, and algae in the tributaries were generally less than those in the river. (USGS)

Florida

Hydrologic disturbance and response of aquatic biota in Big Darby Creek basin, Ohio

Washout and recolonization of macroinvertebrates and algae associated with a spring and summer storm were measured at three sites in Ohio's Big Darby Creek Basin. Related factors, such as streamflow magnitude, shear stress, and streamed disturbance were considered when interpreting observed changes in densities and community structure of macroinvertebrates and algae. During the study, 184 macroinvertebrate taxa and 202 algal taxa were identified. The major taxonomic groups for macroinvertebrates were midges and other true flies (Diptera), caddisflies (Trichoptera), beetles (Coleoptera), mayflies (Ephemeroptera), and stoneflies (Plecoptera). Diatoms were the dominant algae (in terms of percentage of total taxa found) followed by green algae, blue-green algae, euglenoids, golden flagellates, and freshwater red algae. Streamflows associated with the storm events that occurred during April 6-16 and June 23-July 5, 1994, probably had little effect on streambed elevations, but streambed disturbance was documented in the form of shifts in the median particle-size diameters of the subsurface bed materials. The streamflow magnitudes did not correlate well with the magnitude of observed changes in macroinvertebrate and algal-cell densities, but reductions in macroinvertebrate and algal-cell densities generally did occur. Local minima of macroinvertebrate density did not generally correspond to the first sample after the storms, but instead lagged by about 1 to 3 weeks. Other biotic factors, such as emergence of Diptera, probably affected the observed mid-July depression in macroinvertebrate densities. Evaluation of pre-event macroinvertebrate community structure in terms of functional feeding groups and flow-exposure groups showed that, on the basis of percentage of total taxa found, gatherers were the dominant feeding group and flow-facultative taxa were the dominant flow-exposure group. Densities of gatherers decreased from pre-event levels following all the storm events at all sites, whereas flow-facultative and flow-avoiding taxa were significantly reduced only after the summer event at Big and Little Darby Creeks. Algal-cell densities in the first post-event samples always were lower than pre-event densities; however, the total number of taxa present generally were not statistically different. In four out of five of the first post-event samples, algal-cell densities were only 16 to 26 percent of the pre-event densities. The exception was at Little Darby Creek after the spring event, where only the density of stalked algal cells in the community were significantly reduced. The observed resistance to disturbance of the algal community at Little Darby Creek may have resulted from the relative abundance of the mat-forming blue-green algae Oscillatoria spp. The stalked cells were the most consistently reduced in the post-event-samples, whereas holdfast types (such as Audouinella hermannii) and prostrate epiphytes (such as Cocconeis spp) were the most resistant to washout. Algal recolonization rates, measured as the change in algal-cell densities over a 7-day period after the summer storm event, ranged from 0.05 to 1.51 billion cells per square meter per day. These recolonization rates are expected to be affected by factors such as nutrients, temperature, amount of canopy, initial post-event algal density, and grazing by macroinvertebrates and fish. On the basis of canopy and nutrient data, one would expect the algal recolonization rates for the three sites in this study to sort in the order observed.

Water-Resources Investigations Report

Biological, habitat, and water quality conditions in the upper Merced River drainage, Yosemite National Park, California, 1993-1996

Four studies were done in the upper Merced River drainage in Yosemite National Park and nearby areas from 1993 to 1996. First, monitoring studies of benthic algae, benthic invertebrates, fish, and habitat were undertaken at sites near Happy Isles and Pohono bridges from 1993 to 1995 as part of the National Water-Quality Assessment Program of the U.S. Geological Survey. Second, an ecological survey of benthic algae, benthic invertebrates, fish, and habitat was done in the upper Merced River drainage in 1994. Third, a special study of benthic algae, habitat, and water quality was done in the reach of the Merced River within Yosemite Valley to deter-mine whether human activities were having measurable effects on the ecosystem. Fourth, baseline data on benthic algae, benthic invertebrates, and habitat were collected in 1996 at four sites, two of which were undergoing extensive streambank restoration activities. Comparisons of the baseline data with future collections could be used to assess the effects of streambank restoration on aquatic biota. The general conclusion from these studies is that water quality in the upper Merced River was very good from 1993-1996, despite high levels of human activities in some areas. Fish communities did not appear to be a useful indicator of habitat and water quality because of low species richness and the apparent importance of physical barriers in determining species distributions. Measurements of fish densities and size-distributions might be useful, but would be logistically difficult. Benthic algae and benthic invertebrates do appear to be useful in monitoring environmental conditions. Benthic algae may be more sensitive than benthic invertebrates to small environmental differences within years. Benthic algae were also more responsive than benthic invertebrates to differences in discharge between years. Thus, benthic invertebrates may be more useful in comparing environmental conditions between years, independent of discharge conditions.

Water-Resources Investigations Report

Experimental evidence for the effects of polyphenolic compounds from Dictyoneurum californicum Ruprecht (Phaeophyta: Laminariales) on feeding rate and growth in the red abalone Haliotus rufescens Swainson

The effects of polyphenolic compounds from brown algae on grazing and growth rate of the California red abalone Haliotis rufescens Swainson were examined. Abalone consumed three phenolic-poor algal species, Laminaria sinclarii (Harvey) Farlow, Macrocystis pyrifera Agardh, and Nereocystis luetkeana Postels et Ruprecht (mean phenolic content = 0.52% dry mass), at a greater rate than two phenolic-rich species, Dictyoneurum californicum Ruprecht and Cystoseira osmundacea Agardh (mean phenolic content = 4.60% dry mass). This inverse relationship between phenolic content and consumption rate also existed after the algae were macerated and the liquid portion of the blended slurry incorporated in agar discs. However, the correlation between grazing rate and phenolic content imprpve d in this latter experiment, thus suggesting that abalone grazing was deterred significantly by the morphology of L. sinclarii and, to a lesser extent, of M. pyrifera . Polyphenolics extracted from D. californicum reduced abalone grazing rates by 90% when incorporated into agar discs at a concentration of 6 mg·ml −1 . Although abalone were unable to maintain body mass when fed ad libitum on macerated M. pyrifera incorporated into agar discs, polyphenolics from D. californicum further inhibited shell growth when added to the discs at 5 mg·ml −1 . The abalone ate less of the phenol-containing discs than of the discs lacking phenolics. Our results support findings of several prior studies that polyphenolic compounds from brown algae deter grazing by coastal zone herbivores in the northeast Pacific Ocean.

Journal of Experimental Marine Biology and Ecology

Green River oil shale—concept of origin extended: An interdisciplinary problem being attacked from both ends

A much fuller understanding of the Green River oil shale and its organic chemistry will emerge when the geologists, paleontologists, organic chemists, biologists, paleolimnologists, and biogeochemists, who are now working on it, integrate their findings with those of the others. We know from the geology, paleontology, and paleolimnology that the biologic progenitors of the organic substance in the Green River oil shale could only have been microscopic algae, and other micro-organisms, that grew and accumulated in the central parts of large, shallow lakes that existed under a subtropical climate. The only nonlacustrine organic components were wind-blown, or water borne, pollens and waxy spores. These, however, made up a large and important part of the organic-rich sediment. The geology of the Green River Formation shows that as the algal and pollen-rich sediment was buried deeper and deeper, progressively more of its pore water and dissolved constituents were expressed. Static pressures may have reached as much as 210 kg cm −2 , and the ambient temperature rose, with depth, to somewhere within the range between 90° and 125° C. Beneath the ancient lakes a tectonically quiescent environment persisted for tens of millions of years after their organic sediments had been deeply buried. The organic material of the Green River oil shale can be divided into three fractions—a small bitumen fraction that is extractable with common organic solvents, a major fraction called koerogen that consists of insoluble pyrobitumens, and a somewhat smaller inert fraction that is neither soluble nor does it yield oil on pyrolysis. As all three fractions originated in the same algal, pollen-rich sediment, an explanation for their marked differences must be sought in their geochemical history or from a study of the modern analogues of their progenitors. The components of the bitumen fraction consisted of “biological markers” that were inherited from the Eocene plants and animals in which they originally formed. Diagenesis has changed these hydrogen-rich compounds, but not enough to obscure their provenance. Kerogen presumably became insoluble because its hydrogen-rich components polymerized. My speculation is that the inert fraction was derived from a polyphenolic substance produced in the original algal ooze by “non-enzymatic browning.” Only three Classes of non-marine algae need be considered as progenitors of the Green River oil shale; the Xanthophyceae, the Chlorophyceae, and the Cyanophyceae. Only the Cyanophyceae (the blue-green algae) meet the biologic and paleontologic requirements to have served as the dominant precursors of the Green River oil shale. Several other oil shales clearly were derived from the Xanthophyceae, specifically Botryococcus. The blue-green algal ooze now forming, and accumulating, in Mud Lake, Florida, has been studied biologically and chemically as a possible present-day analogue of the Green River oil shale precursor. In this small lake we have established the fact that a bacterial inhibitor is produced, which inhibits decay of the algae and thereby permits the accumulation of energy-rich organic compounds. We infer that a similar indigenous inhibitor must have acted in the Eocene lakes to permit them to become the huge energy sinks they were. Studies of the organic chemistry of living blue-green algae show that they contain appreciable percentages of fatty acids, hydrocarbons, and very large percentages of proteins. These promising, energy-rich compounds could serve as source materials for potential conversion into oil shale in the geologic future. Certain marine anaerobic bacteria convert fatty acids into aliphatic hydrocarbons. Fresh-water obligate anaerobes should be investigated to see if they also convert fatty acids into hydrocarbons. The part played by aquatic animals that live in, or on, freshwater algal ooze in synthesizing hydrocarbons has not been investigated, but deserves attention. Pollen grains, of course, must be considered an important precursor of hydrocarbons produced on pyrolysis. They contain far higher percentages of long chain hydrocarbons and alcohols than most plant materials. The major problem ahead is to account for the progressive hydrogenation and subsequent polymerization of the relatively oxygen-rich constituents of algae such as the polysaccharides, amino acids, ammo sugars, and fatty acids into the insoluble pyrobitumens that constitute, particularly, the kerogen fraction of the Green River oil shale.

Wyoming

Growth response of the ichthyotoxic haptophyte, Prymnesium parvum Carter, to changes in sulfate and fluoride concentrations

Golden alga Prymnesium parvum Carter is a euryhaline, ichthyotoxic haptophyte (Chromista). Because of its presumed coastal/marine origin where SO42- levels are high, the relatively high SO 4 2- concentration of its brackish inland habitats, and the sensitivity of marine chromists to sulfur deficiency, this study examined whether golden alga growth is sensitive to SO 4 2- concentration. Fluoride is a ubiquitous ion that has been reported at higher levels in golden alga habitat; thus, the influence of F- on growth also was examined. In low-salinity (5 psu) artificial seawater medium, overall growth was SO 4 2— dependent up to 1000 mg l-1 using MgSO 4 or Na 2 SO 4 as source; the influence on growth rate, however, was more evident with MgSO 4 . Transfer from 5 to 30 psu inhibited growth when salinity was raised with NaCl but in the presence of seawater levels of SO 4 2- , these effects were fully reversed with MgSO 4 as source and only partially reversed with Na 2 SO 4 . Growth inhibition was not observed after acute transfer to 30 psu in a commercial sea salt mixture. In 5-psu medium, F- inhibited growth at all concentrations tested. These observations support the hypothesis that spatial differences in SO 4 2- –but not F-–concentration help drive the inland distribution and growth of golden alga and also provide physiological relevance to reports of relatively high Mg 2+ concentrations in golden alga habitat. At high salinity, however, the ability of sulfate to maintain growth under osmotic stress was weak and overshadowed by the importance of Mg 2+ . A mechanistic understanding of growth responses of golden alga to SO 4 2- , Mg 2+ and other ions at environmentally relevant levels and under different salinity scenarios will be necessary to clarify their ecophysiological and evolutionary relevance.

PLoS ONE

Evaluation of biological data, Guanella Pass Area, Clear Creek and Park Counties, Colorado, water years 1995-97

Macroinvertebrate and algal community samples were collected during a 3-year period at sites located near Guanella Pass, Colorado, to provide baseline characterization data. Water-quality sampling and habitat evaluations were used to aid in the interpretation of the biological data. The study was part of an environmental investigation for a proposed roadway reconstruction project on Guanella Pass. Discharge was strongly affected by snowmelt during May–July. Habitat scores were optimal (147–199), as determined by U.S. Environmental Protection Agency Rapid Bioassessment Protocol methods. Generally, low median concentrations of nitrogen and phosphorus (less than 0.02 milligram per liter) were detected at all sites. The water temperatures ranged from 0.4 to 11.2 degrees Celsius. The average pH for all sites was neutral, and specific conductivities were dilute (less than 160 microsiemens per centimeter at 25 degrees Celsius). The median suspended-sediment concentration was less than 20 milligrams per liter at all sites. During the study, 100 macroinvertebrate taxa were identified. The dominant taxonomic groups of macroinvertebrates were Diptera (true flies), Ephemeroptera (mayflies), Plecoptera (stoneflies), and Trichoptera (caddisflies). Macroinvertebrate density ranged from 6.6 to 4,300 organisms per square meter at sampled sites. Shannon-Weaver diversity values for the macroinvertebrate samples ranged from 1.6 to 4.5. Collector-gatherers dominated the functional feeding groups at most sites. Average abundance of Ephemeroptera, Plecoptera, and Trichoptera (EPT) was 56.7 percent; EPT:Chironomidae ratios were greater than 2:1 for every site except during water years 1996 and 1997. Chironomids were greater than EPT at four sites in water year 1996 and at one site in water year 1997. The percentage of macroinvertebrate community similarity between site pairs varied from 0 to 80 percent. The number of algal taxa identified was 280. The dominant algal divisions, in terms of density, were Cyanophyta (blue-green algae), Chrysophyta (diatoms), Chlorophyta (green algae), Rhodophyta (red algae), and Euglenophyta (euglenoids). In general, diatom biovolumes dominated the algal assemblage, followed by blue-green algae, green algae, red algae, and euglenoids. Algal densities ranged from 3.1 X 10 2 to more than 4.7 X 10 6 cells per square centimeter, and algal biovolume ranged from 2.3 X 10 4 to 4.6 X 10 9 cells per cubic centimeter. Diversity values for diatoms ranged from 1.5 to 4.9. The pollution tolerance index (PTI) for diatoms ranged from 1.8 to 3.0. Sensitive diatoms were present at each site and ranged from 21 to 97 percent. The percentage of motile diatoms ranged from 0 to 13 percent. The presence of acid-tolerant diatoms ranged from less than 0.5 to greater than 20 percent. The percentage of community similarity between site pairs ranged from 1 to 97 percent. Overall, the biotic metrics that were evaluated during this study indicate that the macroinvertebrate and algal communities in the streams on Guanella Pass are not degraded by the existing road. Erosion may cause some localized effects but may not affect the overall health of the whole stream system. The degraded condition of Geneva Creek probably is due to natural effects as opposed to road effects. Although upper South Clear Creek, upstream from Naylor Creek, is located downstream from several sources of road runoff, the biological community at this site does not seem to be negatively affected.

Colorado

Kelp forest monitoring at Naval Base Ventura County, San Nicolas Island, California: Fall 2017 and Spring 2018, Fourth Annual Report

To assess and track changes to the rocky subtidal communities surrounding San Nicolas Island, the U.S. Navy entered into an agreement with the U.S. Geological Survey (USGS) in 2014 to conduct an ecological monitoring program at several sites around the island. Four permanent sites—Nav Fac 100, West End, Dutch Harbor, and Daytona 100—were established. The sites were based on ones that had been monitored since 1980 by USGS and were combined or expanded for better comparability with monitoring programs conducted at the other California Channel Islands. At the sites, scientists from USGS and our cooperator, the University of California, Santa Cruz, measured bottom cover of algae and sessile invertebrate species in quadrats, counted and sized fish on swimming transects, and counted a suite of kelps and invertebrates on benthic band transects. Holdfast diameter and number of stipes of giant kelp ( Macrocystis pyrifera ) were recorded on these transects, and size data were collected for urchins, sea stars, and shelled mollusks. Bottom temperatures were recorded at hourly intervals by archival data loggers that were deployed at the sites. This report focuses primarily on data collected in fall 2017 and spring 2018 and makes comparisons with data collected in previous years, beginning in fall 2014. Nav Fac 100 is a site with a relatively low benthic profile, situated on the north side of San Nicolas Island. It was previously urchin dominated but underwent a dramatic decline in purple sea urchins in 2015 and 2016. Since then, macroalgae has become more prevalent as both annual brown algae, such as Dictyota, and perennials (for example, Cystoseira ) have become established. The invasive brown alga Sargassum horneri has also become established. West End, on the southwest side of the island, also lacks much bottom relief but has more crevice habitat associated with boulders. It remains dominated by kelps and red algae, but red algae have decreased recently. Dutch Harbor, on the south side, has many high relief rocky reefs and had the greatest fish and non-motile invertebrate densities. It remains the most stable of the sites. Daytona 100, on the southeast side, has moderate relief and has remained a patchwork of kelp and urchin dominated areas with moderate fish density. The main change at the sites during the last 4 years was the decline in urchin numbers at Nav Fac 100. There was storm-related mortality and subsequent recruitment in the M. pyrifera population at several of the sites in both 2016 and 2017. The winter of 2018, however, was relatively mild, with less destructive storm-related disturbance. The invasive brown alga S. horneri , first seen at San Nicolas Island at Nav Fac 100 in fall 2015, has become firmly established there during the last 2 sampling years. Finally, moderate increases were observed in purple urchin densities at all sites this spring. Long-term data are presented to illustrate trends and changes over the past three decades. Results indicate continued monitoring to evaluate ecosystem effects from perturbations owing to natural processes and anthropomorphic factors, including recovery of the sea otter population, changes in fisheries, invasive species and changing environmental conditions, could be valuable to inform managers’ decision-making.

California

The coral reef of South Moloka'i, Hawai'i— Portrait of a sediment-threatened fringing reef

Moloka‘i, with the most extensive coral reef in the main Hawaiian Islands, is especially sacred to Hina, the Goddess of the Moon. As Hinaalo, she is the Mother of the Hawaiian people; as Hinapuku‘a, she is the Goddess of Fishermen; and in the form Hina‘opuhalako‘a, she is the Goddess who gave birth to coral, coral reefs, and all spiny marine organisms. Interdependence between the reef’s living resources, the people, and their cosmology was the basis for management of Moloka‘i’s coastal waters for over a thousand years. The ancient residents of Moloka‘i built the greatest concentration of fishponds known anywhere, but their mastery of mariculture, something needed now more than ever, was lost after near genocide from exotic Western diseases. Subsequent destruction of the native vegetation for exotic cattle, goats, pigs, sugar cane, and pineapple caused soil erosion and sedimentation on the reef flat. This masterful volume clearly documents that soil washing into the sea is the major threat to the reef today. Abandoned fishponds, choked with sediment, now act as barriers and mud traps, making damage to corals less than it would otherwise would have been. The role of mud and freshwater from land in preventing coral reef growth, clearly articulated in Charles Darwin’s first book, The Structure and Distribution of Coral Reefs, is the major theme of this book. All around the tropics, coral reefs have died from huge increases in terrestrial sedimentation that resulted from destruction of hillside forests for cash-crop agriculture and pastures in the colonial era, especially in Latin America, Asia, and the islands of the Caribbean and Indo-Pacific. It is obvious that one cannot manage the coastal zone as a unit separate from the watersheds that drain into it. Yet there has been surprisingly little comprehensive scientific study of these impacts. In this landmark volume, U.S. Geological Survey researchers and their colleagues have developed and applied a remarkably integrated approach to the reefs of Moloka‘i, combining geology, oceanography, and biology to provide an in-depth understanding of the processes that have made these reefs grow and that now limit them. They have joined old fashioned natural history of marine animals and plants with study of the geological evolution of the island, hydrology, meteorology, and land-use history, to an arsenal of new methods of remote sensing, including aerial photography, laser ranging, infrared thermal mapping, seismic reflection, in-situ instrumentation to measure chemical parameters of water quality, and direct measurements of the physical driving forces affecting them—such as wave energy, currents, sedimentation, and sediment transport. They provide a level of documentation and insight that has never been available for any reef before. A remarkable feature of this book is that it is aimed at the people of Moloka‘i to inform them of what is happening to their reef and what they might do to preserve their vital resources. The scientific data and interpretations are expressed in unusually clear and comprehensible language, free of the professional jargon that makes most technical publications impenetrable to the public that most needs to know about them, yet without loss of scientific rigor. Here readers will see clearly explained the whole path of soil loss, from the impacts of wild pigs and goats at higher elevations, deforestation of the hills for cattle pasture at lower levels, and denudation of low lands for cash crops. The resulting biological impoverishment has bared the soils, which wash away in flash storms, smothering the inshore reefs, whose growth was already limited because they had grown right up to sea level. The data in this book show that the mud doesn’t get far if it is washed into the sea during a big storm with heavy waves. Afterwards this mud keeps getting stirred up by every succeeding storm, spreading and affecting corals over wider areas until it is finally washed out of the system—and that only happens if there is no more new mud washing onto the reef. I saw this myself a few years ago in Pila‘a Bay on Kaua‘i, where a bulldozed hillside of abandoned sugar cane fields had slumped right on top of a coral reef following exceptional rains. Years later, the algae species were zoned in a way that clearly mapped the distribution of nutrients washed into the bay, most likely from fertilizers bound to the eroded soils. That pattern closely mimics, on a small scale, that shown in Moloka‘i in this volume, where the inner reef is covered with algae, zoned by species in a way that points to land-based sources of nutrients, while the outermost reef slope is still coral dominated, and the deep algae seem to indicate deep-water nutrient upwelling. What of the future? The Hawaiian Islands have been exceptionally fortunate to be spared the worst coral heatstroke death from high temperatures, at least to date. So far, the worst global warming impacts have luckily been small in this region, and the small number of people on Moloka‘i has kept population densities, and sewage pollution, low compared to the more developed islands. Nutrients from years of sugar and pineapple fertilization, and the washing of this soil onto the reefs, show clear influences on the pattern of algae on the reef. Even at very low levels of nutrients, well below that which drives algae to smother and kill coral reefs, more algae is present. Soil erosion control is therefore the key to better management of both nutrients and turbidity on Moloka‘i reefs. To that end land management actions mentioned in this book, such as suppressing wild fires and eliminating wild goats and pigs, could be made even more effective if supplemented by active erosion control using plants whose roots bind the soil effectively in place. Through all of these efforts, Hina and the people of Moloka‘i could be happy again!

Hawaii

Biological water-quality assessment of selected streams in the Milwaukee Metropolitan Sewerage District Planning Area of Wisconsin, 2007

Changes in the water quality of stream ecosystems in an urban area may manifest in conspicuous ways, such as in murky or smelly streamwater, or in less conspicuous ways, such as fewer native or pollution-sensitive organisms. In 2004, and again in 2007, the U.S. Geological Survey sampled stream organisms—algae, invertebrates, and fish—in 14 Milwaukee area streams to assess water quality as part of the ongoing Milwaukee Metropolitan Sewerage District (MMSD) Corridor Study. In addition, passive-sampling devices (SPMDs, “semipermeable membrane devices”) were deployed at a subset of sites in order to evaluate the potential exposure of stream organisms to certain toxic chemicals. Results of the 2007 sampling effort are the focus of this report. Results of sampling from 2007 are compared with results from 2004. The water quality of sampled streams was assessed by evaluating biological-assemblage data, metrics computed from assemblage data, and an aggregate bioassessment ranking method that combined data for algae, invertebrates, and fish. These data contain information about the abundance (number) of different species in each group of stream organisms and the balance between species that can or cannot tolerate polluted or disturbed conditions. In 2007, the highest numbers of algal, invertebrate, and fish species were found at the Milwaukee River at Milwaukee, the largest sampled site. Algal results indicated water quality concerns at 10 of the 14 sampled sites due to the occurrence of nuisance algae or low percentages of pollution-sensitive algae. When compared to 2004, total algal biovolume was higher in 2007 at 12 of 14 sites, due mostly to more nuisance green algae from unknown causes. Results of several metrics, including the Hilsenhoff Biotic Index (HBI-10), suggest that invertebrate assemblages in the Little Menomonee River, Underwood Creek, and Honey Creek were poorer quality in 2007 compared to 2004. Six sites received “very poor” quality ratings for fish in 2007, mostly because inadequate numbers of fish were collected at five sites to allow computation of an Index of Biotic Integrity (IBI); this resulted in three additional sites receiving “very poor” ratings compared to 2004. Some signs of potential improvement in the fish assemblage were evident at Lincoln Creek, possibly reflecting delayed effects of the restoration of stream habitat, completed in 2002; however, algae and invertebrates did not show signs of improvement. Aggregate bioassessment rankings across all groups of organisms for 2004 and 2007 indicated that water quality at the two Milwaukee River main stem sites (at Milwaukee and near Cedarburg), Jewel Creek, and the Menomonee River at Menomonee Falls was the least-degraded among all sampled sites. Rankings for Oak Creek and Little Menomonee suggested water quality was worse in 2007 compared to 2004 and placed these two sites together with Kinnickinnic River and Underwood Creek, two concrete-line sites, indicating the most-degraded water quality among all sampled sites. The aggregate ranking for Lincoln Creek in 2007 would have placed it in the most-degraded category but for the positive influence of the fish ranking when compared to poor algal and invertebrate rankings. Potential toxicity due to certain manmade chemicals, such as polycyclic aromatic hydrocarbons (PAHs), was found at all six sites where SPMDs were deployed. As was found in 2004, the highest potential toxicity in 2007 was observed at Lincoln Creek where chemical screening in 2007 also showed the highest total PAHs of all six sites; however, potential toxicity at Little Menomonee River, Honey Creek, and Kinnickinnic River was relatively high compared to Milwaukee River near Cedarburg. Although toxicity and chemical results in 2007 did not agree with aggregate rankings for Lincoln Creek because of fish, nor for Honey Creek, the results did agree with aggregate rankings at four of the six sites. In addition to toxicological and chemical influences, the more urbanized sites have high percentages of impervious surface area, resulting in frequent high stream flows that can adversely affect algal, invertebrate, and fish assemblages. Assessments of the ecological status of different groups of organisms and of potential chemical and physical stressors to organisms are important tools in evaluating streamwater quality.

Wisconsin

Characterization of streamflow and nutrient occurrence in the upper White River Basin, Colorado, 1980–2020

In 2016, Colorado Parks and Wildlife identified filamentous algae collected from the main stem White River as Cladophora glomerata , a pervasive nuisance aquatic alga. Excessive levels of filamentous algae can compromise aesthetic quality, limit recreational activities, and have negative effects on aquatic life including strong fluctuations in dissolved oxygen levels and a reduction in overall biodiversity. To increase understanding of the biology of the upper White River Basin in Colorado, identify potential factors promoting or limiting nuisance algal abundance, and outline information to aid in the understanding and protection of water resources, the U.S. Geological Survey (USGS), in cooperation with the White River and Douglas Creek Conservation Districts and the White River Algae Technical Advisory Group, initiated a study to collect and analyze physical, chemical, and biological information for the upper White River Basin. The report describes long-term changes and spatial variations in streamflow and nutrient concentrations and loads in the upper White River Basin and identifies possible nutrient sources in the basin. Long-term streamflow and nutrient data indicate that conditions in the upper White River Basin have become more favorable to benthic algae over varying timescales. Upward trends in total phosphorus concentrations and loads were found at three sites across the basin from 2000 to 2020. Total phosphorus loads increased around 50 percent, ranging from 18 to 48 pounds per year. Annual estimated concentrations of total phosphorus from 2005 to 2020 were above algal-specific nutrient criteria at the North Fork White River at Buford, Colo., indicating that phosphorus concentrations at this site likely promote algal growth. Discrete concentrations of total phosphorus exceeded algal-specific nutrient criteria on the South Fork and main stem White River during the summer season, though less frequently than samples collected from the North Fork White River. Nitrogen to phosphorus molar ratios collected from July to September indicate movement from colimitation (10–22) to nitrogen limited (less than 13) conditions at the North Fork White River at Buford, Colo. and the South Fork White River at Buford, Colo. starting in 2012. The magnitude of trends in phosphorus loads were generally greater than trends in concentrations across all sites, indicating that the largest changes in concentrations occurred during greater streamflow periods. At White River above Coal Creek, near Meeker, Colo., significant downward trends in streamflow were found in August and September for mean streamflow (15 and 14 percent per decade, respectively) and 7-day minimum streamflows (23 and 22 percent per decade, respectively). Significant downward trends in annual 7-day minimum streamflows of 24 percent per decade, or 66 percent over the 40-year period of analysis, were also observed. Though not significant based on 90-percent confidence intervals, downward trends in 1-day maximum and mean streamflows in May and June and corresponding increases in April may indicate a shift toward earlier snowmelt runoff, as observed across western North America and the Colorado River Basin. Alteration of the annual hydrograph can influence factors that influence algae including nutrient input and dilution potential, water temperature, dissolved oxygen, light availability, and physical disturbance. Results from a synoptic-style sampling identified the lower North Fork White River subbasin as a large source of phosphorus to the downstream system. Large increases in phosphorus loads were observed below Marvine Creek. Synoptic samples and samples collected during spring and summer of 2019 and 2020 also show large increases in total nitrogen, orthophosphate, and total phosphorus occurring at the furthest three downstream sites on the White River. To further evaluate sources of nitrogen in the upper White River Basin, the dual isotopic composition of nitrate was compared across four sites. The isotopic compositions of nitrate were all within the expected range of typical soil-derived nitrate, though the same values can also be derived from a mixture of agricultural fertilizer and manure or septic sources.

Colorado

Summary of biological and contaminant investigations related to stream water quality and environmental setting in the Upper Colorado River basin, 1938-95

As part of the U.S. Geological Survey's National Water-Quality Assessment (NAWQA) program, an inventory of the biological and contaminant investigations for the Upper Colorado River Basin study unit was conducted. To enhance the sampling design for the biological component of the program, previous studies about the ecology of aquatic organisms and contaminants were compiled from computerized literature searches of biological data bases and by contacting other Federal, State, and local agencies. Biological and contaminant investigations that have been conducted throughout the basin since 1938 were categorized according to four general categories of biological investigations and two categories of contaminant investigations: algal communities, macroinvertebrate communities, fish communities, habitat characterization, contaminants in organism tissue, and contaminants in bed sediment. The studies were identified by their locations in two physiographic provinces, the Southern Rocky Mountains and the Colorado Plateau, and by the predominant land use in the area of the investigation. Studies on algal communities and contaminants in organism tissue and in bed sediment are limited throughout the basin. Studies on macroinvertebrate and fish communities and habitat characterization are the most abundant in the study unit. Natural and human factors can affect biological communities and their composition. Natural factors that affect background water-quality conditions are physiography, climate, geology, and soils. Algae, macroinvertebrates, and fish that are present in the Southern Rocky Mountains and the Colorado Plateau physiographic provinces vary with altitude and physical environment. Green algae and diatoms are predominant in the higher altitude streams, and blue-green, golden-brown, and green algae are predominant in the lower altitude streams. Caddisflies, mayflies, and stoneflies are the dominant macroinvertebrates in the higher altitudes, whereas aquatic worms, leeches, and dragonflies are more common at lower altitudes. Cold-water species, such as trout, are present at the higher altitudes, and warmer water species, such as catfish, carp, and suckers, are predominant at the lower altitudes. Human factors that affect water-quality conditions are mining, urbanization, agriculture, and hydrologic modifications. Mining areas can be depleted of organisms or contain a low diversity of species. Acid-tolerant algae, such as certain species of green algae and diatoms, and metal-tolerant caddisflies can be present in mining areas. Urbanized areas are located in the Southern Rocky Mountains and in the Colorado Plateau and contain species characteristic of the physiographic provinces. Agricultural areas contain species, such as blue-green algae, aquatic worms, suckers, and carp, that can tolerate organic enrichment, sedimentation, and lower concentrations of dissolved oxygen.

Water-Resources Investigations Report

Water quality and phytoplankton communities in Lake Pontchartrain during and after the Bonnet Carre Spillway opening, April to October 2008, in Louisiana, USA

The Bonnet Carré Spillway, located 28 miles northwest of New Orleans, was constructed in the early 1930s as part of an integrated flood-control system for the lower Mississippi River system. From 11 April to 8 May 2008, Mississippi River water was diverted through the spillway into the 629-square-mile Lake Pontchartrain, which is hydraulically connected to the Gulf of Mexico. On 8 April, prior to the opening of the spillway, water-quality instruments were deployed and recorded hourly measurements of water temperature, dissolved oxygen, specific conductance, pH, and nitrate. Discrete water-quality and phytoplankton (algae) samples were collected in Lake Pontchartrain from 8 April to 3 October 2008 to assess the water-quality nutrient enrichment effects of the diversion on the lake. The maximum influence of river water in the southern portion of the lake was captured with continuous (hourly) monitoring of nitrate concentrations, and field measurements such as of specific conductance during the critical period in late April to early May. By late May, the deployed instruments had recorded the arrival, peak, and decline of selected constituents associated with the freshwater influx from the Mississippi River/Bonnet Carré Spillway diversion. The continuous monitoring data showed the short-term interactions of high-nitrate, low-specific conductance river water and low-nitrate, high-specific conductance lake water. The phytoplankton community composition, as an indicator of water quality, illustrated an extended response from the river water evident even after the continuous and discrete samples indicated that the lake had returned to pre-diversion conditions. The initial phytoplankton community response to nutrient increases was related to accumulations of diatoms. During periods of low nutrient concentrations, accumulations of blue-greens occurred by July and August. As blue-green algae cell densities and biovolumes increased in the summer, so did the species richness of blue-green algae, particularly the harmful algae bloom taxa. Cell densities and biovolume of the phytoplankton lake indicator taxa Skeletonema costatum , Anabaena sp., and Cylindrospermopsis raciborskii were highest and dominated the diatom and blue-green algae communities during the period of most river water influence on the lake and immediately following the freshwater inflows. The dominance and recession of these indictor taxa reflect the dramatic changes that occurred in the phytoplankton community in response to an increase in nutrient-rich freshwater from the diversion into the lake, and not normal seasonal phytoplankton compositional differences. Water-quality data indicated a gradual reversion to pre-diversion lake conditions by June to July, but shifts in the phytoplankton composition were still evident through August 2008. Observations from this study were similar to results from previous studies of Mississippi River/Bonnet Carré Spillway diversion opening in 1997.

Louisiana

Notable decomposition products of senescing Lake Michigan Cladophora glomerata

Massive accumulations of Cladophora , a ubiquitous, filamentous green alga, have been increasingly reported along Great Lakes shorelines, negatively affecting beach aesthetics, recreational activities, public health and beachfront property values. Previously, the decomposition byproducts of decaying algae have not been thoroughly examined. To better understand the negative consequences and potential merit of the stranded Cladophora , a three month mesocosm study of the dynamic chemical environment of the alga was conducted using fresh samples collected from southern Lake Michigan beaches. Typical fermentation products, such as organic acids, sulfide compounds, and alcohols were detected in the oxygen–deprived algae. Short chain carboxylic acids peaked on day seven, in correspondence with the lowest pH value. Most low molecular mass carbon compounds were eventually consumed, but 4-methylphenol, indole, and 3-methylindole were detected throughout the incubation period. Natural oils were detected in fresh and decomposing algae, indicating the stable nature of these compounds. The mesocosm experiment was validated by directly sampling the fluid within decomposing Cladophora mats in the field; many of the same compounds were found. This study suggests that the problematic Cladophora accumulations may be harvested for useful byproducts, thereby reducing the odiferous and potentially harmful mats stranded along the shorelines.

Lake Michigan

Spatial and temporal patterns of surface water quality and ichthyotoxicity in urban and rural river basins in Texas

The Double Mountain Fork Brazos River (Texas, USA) consists of North (NF) and South Forks (SF). The NF receives urban runoff and twice-reclaimed wastewater effluent, whereas the SF flows through primarily rural areas. The objective of this study was to determine and compare associations between standard water quality variables and ichthyotoxicity at a landscape scale that included urban (NF) and rural (SF) sites. Five NF and three SF sites were sampled quarterly from March 2008 to March 2009 for specific conductance, salinity, hardness, pH, temperature, and turbidity; and a zebrafish ( Danio rerio ) embryo bioassay was used to determine ichthyotoxicity. Metal and nutrient concentrations at all sites were also measured in addition to standard water quality variables in spring 2009. Principal component analyses identified hardness, specific conductance, and salinity as the water variables that best differentiate the urban NF (higher levels) from rural SF habitat. Nutrient levels were also higher in the NF, but no landscape scale patterns in metal concentrations were observed. Ichthyotoxicity was generally higher in NF water especially in winter, and multiple regression analyses suggested a positive association between water hardness and ichthyotoxicity. To test for the potential influence of the toxic golden alga ( Prymnesium parvum ) on overall ichthyotoxicity, a cofactor known to enhance golden alga toxin activity was used in the bioassays. Golden alga ichthyotoxicity was detected in the NF but not the SF, suggesting golden alga may have contributed to overall ichthyotoxicity in the urban but not in the rural system. In conclusion, the physicochemistry of the urban-influenced NF water was conducive to the expression of ichthyotoxicity and also point to water hardness as a novel factor influencing golden alga ichthyotoxicity in surface waters.

Texas

Application of a microfluidic quantitative polymerase chain reaction technique to monitor bacterial pathogens in beach water and complex environmental matrices

Microfluidic quantitative polymerase chain reaction (MFQPCR) and conventional quantitative polymerase chain reaction methods were compared side by side in detecting and quantifying 19 genetic markers associated with Escherichia coli and select bacterial pathogens in algae, beach sand, and water from Lake Michigan. Enteropathogenic E. coli (EPEC), Shiga toxin-producing E. coli , Salmonella spp., Campylobacter jejuni , and Clostridium perfringens were among the pathogens tested. Of the pathogenic markers, eaeA that encodes intimin in EPEC was detected in all sample types: water (5%), detached/floating algae (42%), exposed/stranded algae (43%), sand below exposed algae (27%), and nearshore sand with no algae (22%). Other pathogenic markers, however, were detected sporadically. Despite comparable results from the two methods for the genetic markers tested in this study, the MFQPCR method may be superior, with the advantage of detecting and quantifying multiple pathogens simultaneously in environmental matrices.

Indiana

Water-quality, biological, and physical-habitat conditions at fixed sites in the Cook Inlet Basin, Alaska, National Water-Quality Assessment Study Unit, October 1998-September 2001

The Cook Inlet Basin study unit of the U.S. Geological Survey National Water-Quality Assessment Program comprises 39,325 square miles in south-central Alaska. Data were collected at eight fixed sites to provide baseline information in areas where no development has taken place, urbanization or logging have occurred, or the effects of recreation are increasing. Collection of water-quality, biology, and physical-habitat data began in October 1998 and ended in September 2001 (water years 1999-2001). The climate for the water years in the study may be categorized as slightly cool-wet (1999), slightly warm-wet (2000), and significantly warm-dry (2001). Total precipitation was near normal during the study period, and air temperatures ranged from modestly cool in water year 1999 to near normal in 2000, and to notably warm in 2001. Snowmelt runoff dominates the hydrology of streams in the Cook Inlet Basin. Average annual flows at the fixed sites were approximately the same as the long-term average annual flows, with the exception of those in glacier-fed basins, which had above-average flow in water year 2001. Water temperature of all streams studied in the Cook Inlet Basin remained at 0 oC for about 6 months per year, and average annual water temperatures ranged from 3.3 to 6.2 degrees Celsius. Of the water-quality constituents sampled, all concentrations were less than drinking-water standards and only one constituent, the pesticide carbaryl, exceeded aquatic-life standards. Most of the stream waters of the Cook Inlet Basin were classified as calcium bicarbonate, which reflects the underlying geology. Streams in the Cook Inlet Basin draining areas with glaciers, rough mountainous terrain, and poorly developed soils have low concentrations of nitrogen, phosphorus, and dissolved organic carbon compared with concentrations of these same constituents in streams in lowland or urbanized areas. In streams draining relatively low-lying areas, most of the suspended sediment, nutrients, and dissolved organic carbon are transported in the spring from the melting snowpack. The urbanized stream, Chester Creek, had the highest concentrations of calcium, magnesium, chloride, and sodium, most likely because of the application of de-icing materials during the winter. Several volatile organic compounds and pesticides also were detected in samples from this stream. Aquatic communities in the Cook Inlet Basin are naturally different than similar sites in the contiguous United States because of the unique conditions of the northern latitudes where the Cook Inlet Basin is located, such as extreme diurnal cycles and long periods of ice cover. Blue-green algae was the dominant algae found at all sites although in some years green algae was the most dominant algae. Macroinvertebrate communities consist primarily of Diptera (true flies), Ephemeroptera (mayflies), and Plecoptera (stoneflies). Lowland areas have higher abundance of aquatic communities than glacier-fed basins. However, samples from the urbanized stream, Chester Creek, were dominated by oligochaetes, a class of worms. Most of the functional feeding groups were collector-gatherers. The number of taxa for both algae and macroinvertebrates were highest in water year 2001, which may be due to the relative mild winter of 2000?2001 and the above average air temperatures for this water year. The streams in the Cook Inlet Basin typically are low gradient. Bank substrates consist of silt, clay, or sand, and bed substrate consists of coarse gravel or cobbles. Vegetation is primarily shrubs and woodlands with spruce or cottonwood trees. Canopy angles vary with the size of the stream or river and are relatively low at the smaller streams and high at the larger streams. Suitable fish habitat, such as woody debris, pools, cobble substrate, and overhanging vegetation, is found at most sites. Of the human activities occurring in the fixed site basins ? high recreational use, logging, and urbanizat

Scientific Investigations Report