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USGS2017

Proximate effects of temperature versus evolved intrinsic constraints for embryonic development times among temperate and tropical songbirds

The relative importance of intrinsic constraints imposed by evolved physiological trade-offs versus the proximate effects of temperature for interspecific variation in embryonic development time remains unclear. Understanding this distinction is important because slow development due to evolved trade-offs can yield phenotypic benefits, whereas slow development from low temperature can yield costs. We experimentally increased embryonic temperature in free-living tropical and north temperate songbird species to test these alternatives. Warmer temperatures consistently shortened development time without costs to embryo mass or metabolism. However, proximate effects of temperature played an increasingly stronger role than intrinsic constraints for development time among species with colder natural incubation temperatures. Long development times of tropical birds have been thought to primarily reflect evolved physiological trade-offs that facilitate their greater longevity. In contrast, our results indicate a much stronger role of temperature in embryonic development time than currently thought.

Scientific Reports↗

USGS2012

Conditions and processes affecting radionuclide transport

Characteristics of host rocks, secondary minerals, and fluids would affect the transport of radionuclides from a previously proposed repository at Yucca Mountain, Nevada. Minerals in the Yucca Mountain tuffs that are important for retarding radionuclides include clinoptilolite and mordenite (zeolites), clay minerals, and iron and manganese oxides and hydroxides. Water compositions along flow paths beneath Yucca Mountain are controlled by dissolution reactions, silica and calcite precipitation, and ion-exchange reactions. Radionuclide concentrations along flow paths from a repository could be limited by (1) low waste-form dissolution rates, (2) low radionuclide solubility, and (3) radionuclide sorption onto geological media. The chief sources of radioactivity in spent nuclear fuel are americium, plutonium, and neptunium. Therefore, studies have concentrated on their geochemical mobility. Uranium-233, uranium-234, iodine-129, technetium-99, and other radionuclides also have been included in some experiments. Solubilities were determined experimentally in representative Yucca Mountain waters. Sorption coefficients were determined using water, rock, and pure mineral samples from Yucca Mountain. Batch experiments were performed at several pH levels and oxidizing conditions. Dynamic transport-column experiments, diffusion experiments, and solid-rock beaker experiments also were conducted. The batch tests gave slightly lower retardation factors than those derived from column-breakthrough experiments. This finding indicates that using batch-sorption coefficients to predict radionuclide transport will yield conservative results in a performance assessment. Understanding of unsaturated-zone transport is based on laboratory and field-scale experiments. Fractures provide advective transport pathways. Sorption and matrix diffusion may contribute to retardation of radionuclides. Conversely, sorption onto mobile colloids may enhance radionuclide transport.

GSA Memoirs↗

USGS2022

Permeability of methane hydrate-bearing sandy silts in the deep-water Gulf of Mexico (Green Canyon Block 955)

Permeability is one of the most crucial properties governing fluid flow in methane hydrate reservoirs. This paper presents a comprehensive permeability analysis of hydrate-bearing sandy silt pressure-cored from Green Canyon Block 955 (GC 955) in the deep-water Gulf of Mexico. We developed an experimental protocol to systematically characterize the transport and petrophysical properties in pressure cores. The in situ effective permeability ranges from 0.1 md (1.0 × 10 −16 m 2 ) to 2.4 md (2.4 × 10 −15 m 2 ) in these natural sandy silts cores with hydrate occupying 83%–93% of the pore space. When hydrate dissociates from these cores, the measured intrinsic permeability ( k 0 ) is 0.3 md (3.0 × 10 −16 m 2 ) to 9.3 md (9.3 × 10 −15 m 2 ); these results are affected by fines migration during hydrate dissociation. We analyzed samples reconstituted from these sandy silts and found k 0 to range from ∼12 md (∼1.2 × 10 −14 m 2 ) to ∼41 md (∼4.1 × 10 −14 m 2 ). The water relative permeabilities ( k rw ) of GC 955 pressure cores are large relative to other natural pressure cores from offshore Japan, offshore India, and onshore Alaska. These k rw values are also higher than predicted by current conceptual relative permeability models where hydrate fills the pores or coats the grains of the sediments. This fundamental conundrum requires further study. Our work provides essential parameters to reservoir simulation models seeking to predict hydrate formation in geological systems, evaluate the gas production potential, and explore the best way to produce this energy resource in sandy silt reservoirs.

Louisiana↗

USGS2006

Survival and growth of age-0 steelhead after surgical implantation of 23-mm passive integrated transponders

Little information is available on the effects of implanting 23-mm passive integrated transponder (PIT) tags in salmonids less than 90 mm fork length (FL). Using juvenile steelhead Oncorhynchus mykiss (range, 73–97 mm FL), we compared instantaneous growth rates and survival among three experimental groups: control, surgery with no tag, and surgery with tag. Survival rate was lower for tagged fish (86%) than for control and surgery−no tag fish (virtually 100% in each group). Approximately 90% of the mortalities occurred during days 1–3. Growth rate for the tagged group was lower for the first two 10-d measurement intervals; however, during the third 10-d interval, growth rates for tagged fish equaled or exceeded values for the other groups. These results suggest that tagged fish recovered by day 20. Growth rates for the control and surgery−no tag groups did not differ from one another during any measurement interval. Tag retention rate was 97% over the 30-d period of the study. It appears that the combination of fish length and tag size in this study resulted in short-term negative effects on growth rate and survival; however, 23-mm PIT tags may still be useful for studies of salmonids 80–90 mm FL when survival is not the parameter of interest.

North American Journal of Fisheries Management↗

USGS2014

Are large-scale flow experiments informing the science and management of freshwater ecosystems?

Greater scientific knowledge, changing societal values, and legislative mandates have emphasized the importance of implementing large-scale flow experiments (FEs) downstream of dams. We provide the first global assessment of FEs to evaluate their success in advancing science and informing management decisions. Systematic review of 113 FEs across 20 countries revealed that clear articulation of experimental objectives, while not universally practiced, was crucial for achieving management outcomes and changing dam-operating policies. Furthermore, changes to dam operations were three times less likely when FEs were conducted primarily for scientific purposes. Despite the recognized importance of riverine flow regimes, four-fifths of FEs involved only discrete flow events. Over three-quarters of FEs documented both abiotic and biotic outcomes, but only one-third examined multiple taxonomic responses, thus limiting how FE results can inform holistic dam management. Future FEs will present new opportunities to advance scientifically credible water policies.

Frontiers in Ecology and the Environment↗

USGS1995

Effect of timber harvest on soil carbon storage at Blodgett Experimental Forest, California

Four plots from a mixed conifer forest were similarly cleared, burned, and replanted at various times over 17 years; a plot logged 79 years before sampling was used as a control. The plots had similar slope (2 to 15%, midslope position), aspect (south to southeast), and soil type (Holland series: mesic Haploxeralf; a Gray Brown Luvisol in the Canadian classification system). Twenty sites at each plot were sampled volumetrically by horizon to 20 cm below the organic–mineral soil boundary. Samples were analyzed for bulk density, organic C, and total N. There was an initial loss (15%) of organic C from the soil within 1 to 7 years, likely the result of oxidation (burning and decomposition) and erosion. For 17 years of forest regrowth, the soil continued to lose C (another 15%), probably owing to decomposition of slash material and possibly erosion, despite the slight accumulation of new litter and roots. After 80 years of regrowth, rates of carbon accumulation exceeded rates of loss, but carbon storage had declined and was not likely to recover to preharvest levels. Timber harvest and site preparation dramatically altered soil C and N distribution, in which C/N ratios after site preparation were initially high throughout the upper 20 cm. Subsequently, C/N ratios became lower with depth and with recovery age. Although stocks of C and N varied considerably among the plots and did not change consistently as a function of recovery age, the C/N ratios did vary systematically with recovery age. We hypothesize that the amount of C ultimately stored in the soil at steady state depends largely on N reserves and potentials, which appear to vary with erosion, intensity of burning, and site treatment.

California↗

USGS1995

Implications of Coulomb plasticity for the velocity dependence of experimental faults

Simulated fault gouges often deform more stably than initially bare surfaces of the same composition. It is important to understand why the sliding stability is enhanced because the presence of gouge on natural faults may have the same effect as seen in experiments, and thus explain the absence of earthquakes at shallow depths. Gouge stabilization in experiments has been attributed to positive contributions to velocity dependence within gouge layers from either dilation (Maroneet al., 1990) or grain fracture (Biegelet al., 1989). In this study we test the hypothesis that some aspects of gouge and initially bare surface velocity dependence are identical by measuring the time-dependent constitutive parameter b. An important result follows however from stress analysis: if both sample configurations are frictional in the Mohr-Coulomb sense, each configuration is required to deform on planes of distinctly different orientation. The measured strength and velocity dependence will reflect this geometric difference. Our observed values of b for simulated granite and quartz gouge are two to two and a half times smaller than b for initially bare surfaces. This difference is completely accounted for if gouge is represented as a cohesionless-Coulomb plastic material. The analysis demonstrates the following points: 1) gouge deformation is fully consistent with Coulomb plasticity, 2) observed gouge velocity dependence is a function of observed strength and 3) the constitutive parameter b is the same for both bare surfaces and gouge. Furthermore, the results suggest that there is no time-dependent strengthening associated with stabilizing effects in gouge. These observations provide a framework for understanding how slip on initially bare surfaces and gouge deformation are related. ?? 1995 Birkha??user Verlag.

Pure and Applied Geophysics PAGEOPH↗

USGS1977

Experimental woodcock management at the Moosehorn National Wildlife Refuge

The purpose of this study is to develop woodcock(Philohela minor) management techniques that can be easily used by the small landowner or incorporated with other land management operations such as commercial timber harvesting. The Moosehorn National Wildlife Refuge contains areas which are characteristic of the abandoned farms now being purchased for recreation or retirement as well as areas suitable for commercial forest management. Woodcock management, beginning in 1973, has centered on rejuvenation of diurnal habitat and creation of summer fields and singing grounds. Strips (10 mwide, 25 to 125 mlong and separated by 40 m) were clear~cut in two alder (Alnus sp.) stands resulting in increased diurnal use in at least one cover, increased singing male use and good alder regeneration. Small clear-cuts (30 X30 m) in a large contiguous woodland (1200 ha) with a history of few singing males resulted in an increased number of singing males despite an overall decrease in the number of singing males throughout the refuge. Management strategies and recommendations also are given.

Book chapter↗

USGS2025

Stressor-driven changes in freshwater biological indicators inform spatial management strategies using expert knowledge, observational data, and hierarchical models

Stream ecosystems face continuous pressures from multiple anthropogenic stressors that reshape biological communities and impact ecosystem health and services. Managers can encounter challenges in stewarding ecosystems threatened by multiple stressors, in part because most multiple stressor studies are experimental and, while valuable, offer limited management relevance in targeting these stressors on the landscape. Recent advances in causal inference coupled with large biomonitoring data sets could further understanding of observational stressor-response relationships, aiding management. In this study, we use bioassessment data in the Chesapeake Bay watershed in the mid-Atlantic region of the United States to identify how water quality and physical habitat stressors influence key benthic macroinvertebrate response metrics, considering hierarchical relationships using Bayesian networks. Results suggest water temperature and specific conductivity were prevalent stressors in a mountainous region (northern Appalachians), whereas in an agriculturally dominated region (southern Appalachians) physical habitat alterations were the predominant stressor. In mixed-land use regions (Piedmont & Coastal Plains), specific conductivity was a key stressor, but habitat heterogeneity was important for macroinvertebrate metrics. To illustrate how these stressor-response relationships can be used to guide management decisions, we applied the resist-accept-direct (RAD) framework to develop a portfolio of management options based on predicted changes in macroinvertebrate metrics in response to physical habitat and water quality stressors. For example, accepting changes in areas with co-occurring stressors may be the most feasible option, whereas directing changes through stream restoration or water quality improvements may be effective in areas with single stressor groups. By leveraging observational bioassessment data and causal inference to identify key stressor-response relationships, this research supports decision making by building a simple, strategic management portfolio.

Delaware, Maryland, New York, Pennsylvania, Virgin↗

USGS2017

Experimental observations on the decay of environmental DNA from bighead and silver carps

Interest in the field of environmental DNA (eDNA) is growing rapidly and eDNA surveys are becoming an important consideration for aquatic resource managers dealing with invasive species. However, in order for eDNA monitoring to mature as a research and management tool, there are several critical knowledge gaps that must be filled. One such gap is the fate of eDNA materials in the aquatic environment. Understanding the environmental factors that influence the decay of eDNA and how these factors impact detection probabilities over time and space could have significant implications for eDNA survey design and data interpretation. Here we experimentally explore decay of eDNA associated with bighead carp ( Hypophthalmichthys nobilis ) biological waste collected from an aquaculture filtration system and with sperm collected from captive silver carp ( H. molitrix ), and how decay may be influenced by differing levels of water turbulence, temperature, microbial load, and pH. We found that the decay patterns of eDNA associated with both H. nobilis biological waste and H. molitrix milt significantly fit monophasic exponential decay curves. Secondly, we observed that the highest temperature we tested resulted in a decay half-life as much as 5.5× more rapid than the lowest temperature we tested. When we suppressed microbial loads in eDNA samples, we observed that overall losses of eDNA were reduced by about 2.5×. When we amended eDNA samples with pond water the half-life of eDNA was reduced by about 2.25×, despite relatively little apparent increase in the overall microbial load. This pattern indicated that species constituency of the microbial community, in addition to microbial load, might play a critical role in eDNA degradation. A shift in pH from 6.5 to 8.0 in the samples resulted in a 1.6× reduction in eDNA halflife. Water turbulence in our study had no apparent effect on eDNA decay. When we combined different temperature, pH, and microbial load treatments to create a rapid decay condition and a slow decay condition, and tracked eDNA decay over 91 days, we observed a 5.0× greater loss of eDNA by Day 5 under rapid decay conditions than under slow decay conditions. At the end of the trials, the differences in eDNA loss between the rapid decay and baseline and slow decay conditions were 0.1× and 3.3×, respectively. Our results strongly demonstrate the potential for environmental factors to influence eDNA fate and, thus, the interpretation of eDNA survey results.

Management of Biological Invasions↗

USGS2018

Sediment infilling benefits rainbow trout passage in a baffled channel

Fish are thought to exploit low velocity recirculation zones in the wakes of baffles to take refuge from challenging hydraulic conditions in baffled culverts. Here, we investigate how sediment deposition in the wakes of baffles affects passage and behaviors of juvenile rainbow trout in a baffled experimental flume. High temporal resolution 3D fish tracking provided detailed kinematics of adopted trajectories. Stereoscopic particle image velocimetry permitted a finely resolved description of the flow over a clear baffle configuration and the same configuration with sediment wedges placed in their wakes. Controlled station-holding, suggestive of flow-refuging, only occurred when sediment wedges were blocking the baffles’ recirculation region. Also, maximum distances of ascent were higher, and slower ground-speeds were employed in the sediment condition. The results of this study suggest the turbulent recirculatory wakes of the clear bed condition caused postural instabilities and were in many ways detrimental to passage performance. Additional research is required to understand the relationships existing between baffle height, hydrodynamic recirculatory wake metrics, sediment deposition and the behavioral responses of fish interacting with weir baffle wakes.

Ecological Engineering↗

USGS2005

Evolution of melt-vapor surface tension in silicic volcanic systems: Experiments with hydrous melts

We evaluate the melt‐vapor surface tension (σ) of natural, water‐saturated dacite melt at 200 MPa, 950–1055°C, and 4.8–5.7 wt % H 2 O. We experimentally determine the critical supersaturation pressure for bubble nucleation as a function of dissolved water and then solve for σ at those conditions using classical nucleation theory. The solutions obtained give dacite melt‐vapor surface tensions that vary inversely with dissolved water from 0.042 (±0.003) J m −2 at 5.7 wt % H 2 O to 0.060 (±0.007) J m −2 at 5.2 wt % H 2 O to 0.073 (±0.003) J m −2 at 4.8 wt % H 2 O. Combining our dacite results with data from published hydrous haplogranite and high‐silica rhyolite experiments reveals that melt‐vapor surface tension also varies inversely with the concentration of mafic melt components (e.g., CaO, FeO total , MgO). We develop a thermodynamic context for these observations in which melt‐vapor surface tension is represented by a balance of work terms controlled by melt structure. Overall, our results suggest that cooling, crystallization, and vapor exsolution cause systematic changes in σ that should be considered in dynamic modeling of magmatic processes.

Journal of Geophysical Research B: Solid Earth↗

USGS2002

Avian responses to late-season grazing in a shrub-willow floodplain

Riparian vegetation in western North America provides important habitat for breeding birds and valuable forage for grazing livestock. Whereas a number of studies have documented the response of riparian vegetation to the removal of cattle, few have experimentally evaluated specific grazing systems. We evaluated the responses of vegetation and breeding birds to two cycles of late-season (August–September) grazing followed by 34 months of rest on the Arapaho National Wildlife Refuge, Colorado. We used a before-and-after control-impact (BACI) design, with two control (ungrazed) and two treatment ( grazed) pastures composing the experimental units. Vegetation characteristics and bird densities were quantified on sample plots prior to and following two cycles of the treatment. We found no statistical differences in vegetation change and few differences in bird-density change among pastures. Inspection of means for pastures, however, suggests that changes in shrub vigor and spatial pattern differed among ungrazed and grazed pastures and that changes in population density for three of the nine bird species and three guilds studied differed among pastures. Our results suggest that habitat for grazing-sensitive birds may be restored while still allowing late-season grazing, although the rate at which species are recovered will be slower than if all cattle are removed.

Conservation Biology↗

USGS2021

Carbon and ecohydrological priorities in managing woody encroachment: UAV perspective 63 years after a control treatment

Woody encroachment, including both woody species expansion and density increase, is a globally observed phenomenon that deteriorates arid and semi-arid rangeland health, biodiversity, and ecosystem services. Mechanical and chemical control treatments are commonly performed to reduce woody cover and restore ecohydrologic function. While the immediate impacts of woody control treatments are well documented in short-term studies, treatment impacts at decadal scales are not commonly studied. Using a controlled herbicide treatment from 1954 in the Sierra Ancha Experimental Forest in central Arizona, USA, we quantify woody encroachment and associated aboveground carbon accumulation in treated and untreated watersheds. Woody encroachment and aboveground carbon are estimated using high resolution multispectral images and photogrammetric data from a fixed-wing unmanned aerial vehicle (UAV). We then combine the contemporary UAV image-derived estimates with historical records from immediately before and after the treatment to consider long-term trends in woody vegetation cover, aboveground carbon, water yield, and sedimentation. Our results indicate that the treatment has had a lasting impact. More than six decades later, woody cover in two treated watersheds are still significantly lower compared to two control watersheds, even though woody cover increased in all four drainages. Aboveground woody carbon in the treated watersheds is approximately one half that accumulated in the control watersheds. The historical records indicate that herbicide treatment also increased water yield and reduced annual sedimentation. Given the sustained reduction in woody cover and aboveground woody biomass in treated watersheds, we infer that the herbicide treatment has had similarly long lasting impacts on ecohydrological function. Land managers can consider legacy impacts from control treatments to better balance carbon and ecohydrological consequences of woody encroachment and treatment activities.

Environmental Research Letters↗

USGS2012

Fat or lean: adjustment of endogenous energy stores to predictable and unpredictable changes in allostatic load

1. The ability to store energy endogenously is an important ecological mechanism that allows animals to buffer predictable and unpredictable variation in allostatic load. The secretion of glucocorticoids, which reflects changes in allostatic load, is suggested to play a major role in the adjustment of endogenous stores to these varying conditions. 2. Although crucially important, the relationship between allostatic load and energy stores remains largely unexplored. Two contrasting hypotheses describe how stores may be adjusted: animals may use low allostatic loads to increase stores to a maximum possible (‘fat and fit’), or they can attain a lean physique due to fitness advantages of a low body mass (‘lean and fit’). 3. We compiled observational and experimental data available for a long-lived seabird to examine the relationship between glucocorticoids and stored energy at two life history stages (incubation and chick-rearing). Data were collected across multiple years and colonies in the North Pacific, thereby reflecting the wide range of environmental conditions birds' encounter in the marine environment. During experimental manipulations, allostatic load was minimized by supplementing food to free-living birds. 4. We found that the relationship between allostatic load and energy stores was clearly curvilinear at both life history stages. Observational data suggested that energy stores remained relatively stable under low allostatic load and decreased under high loads. Experimental data showed that birds did not maximize energy stores under favourable conditions but maintained energy stores below a physiologically attainable level. 5. Energy stores remained consistently lower during chick-rearing compared to incubation across the wide range of variations in allostatic load suggesting that stage-specific trade-offs limit the accumulation of energy during favourable environmental conditions. Secretion of glucocorticoids did not appear to mediate this shift in energy stores between the life history stages. 6. Overall, results of this study support the ‘lean and fit’ hypothesis. We conclude that increased energy stores may not necessarily reflect better environmental conditions experienced by individuals or predict their higher fitness. A major advantage of adopting a lean physique when environmental conditions allow may be the avoidance of additional energetic costs for moving a heavy body. In breeding seabirds, this advantage may be more important during chick-rearing. In the focal species, the secretion of glucocorticoids might be involved in regulation of energy stores within a life history stage but does not appear to mediate an adaptive shift in energy stores between the incubating and chick-rearing stages of reproduction.

Functional Ecology↗

USGS2017

Local adaptation in Trinidadian guppies alters stream ecosystem structure at landscape scales despite high environmental variability

While previous studies have shown that evolutionary divergence alters ecological processes in small-scale experiments, a major challenge is to assess whether such evolutionary effects are important in natural ecosystems at larger spatial scales. At the landscape scale, across eight streams in the Caroni drainage, we found that the presence of locally adapted populations of guppies ( Poecilia reticulata ) is associated with reduced algal biomass and increased invertebrate biomass, while the opposite trends were true in streams with experimentally introduced populations of non-locally adapted guppies. Exclusion experiments conducted in two separate reaches of a single stream showed that guppies with locally adapted phenotypes significantly reduced algae with no effect on invertebrates, while non-adapted guppies had no effect on algae but significantly reduced invertebrates. These divergent effects of phenotype on stream ecosystems are comparable in strength to the effects of abiotic factors (e.g., light) known to be important drivers of ecosystem condition. They also corroborate the results of previous experiments conducted in artificial streams. Our results demonstrate that local adaptation can produce phenotypes with significantly different effects in natural ecosystems at a landscape scale, within a tropical watershed, despite high variability in abiotic factors: five of the seven physical and chemical parameters measured across the eight study streams varied by more than one order of magnitude. Our findings suggest that ecosystem structure is, in part, an evolutionary product and not simply an ecological pattern.

Copeia↗

USGS1981

The possible role of sulfate-reduction kinetics in the formation of hydrothermal uranium deposits

Sulfate is known to be an active oxidizing agent at high temperatures; however, both experimental and geologic evidence indicate that as a hydrothermal solution cools (to about 200 degrees C, depending on pH) kinetic factors slow the rate at which sulfate enters into redox reactions. This retardation of sulfate reduction diminishes the effectiveness of sulfate as an oxidizing agent. Consequently, as cooling proceeds, the reducing effect of H 2 S (and other reduced species) is not balanced with the oxidizing effect of SO (super -2) 4 to the same extent as at higher temperatures. The result is a progressively more reducing solution, which is precisely what is needed to precipitate reduced uranium minerals and to generate the paragenetic sequence observed in these deposits. The same mechanism may apply to other types of epithermal deposits.

Economic Geology↗

USGS2012

An experimental evaluation of potential scavenger effects on snake road mortality detections

As road networks expand and collisions between vehicles and wildlife become more common, accurately quantifying mortality rates for the taxa that are most impacted will be critical. Snakes are especially vulnerable to collisions with vehicles because of their physiology and behavior. Reptile road mortality is typically quantified using driving or walking surveys; however, scavengers can rapidly remove carcasses from the road and cause underestimation of mortality. Our objective was to determine the effect that scavengers might have had on our ability to accurately detect reptile road mortality during over 150 h and 4,000 km of driving surveys through arid shrublands in southwest Wyoming, which resulted in only two observations of mortality. We developed unique simulated snake carcasses out of Burbot (Lota lota), a locally invasive fish species, and examined removal rates across three different road types at three study sites. Carcass size was not a significant predictor of time of removal, and carcass removal was comparable during the daytime and nighttime hours. However, removal of simulated carcasses was higher on paved roads than unpaved or two-track roads at all study sites, with an average of 75% of the carcasses missing within 60 h compared to 34% and 31%, respectively. Scavengers may therefore negatively impact the ability of researchers to accurately detect herpetofaunal road mortality, especially for paved roads where road mortality is likely the most prevalent.

Wyoming↗