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Eradication of invasive Tamarix ramosissima along a desert stream increases native fish density

Spring ecosystems of the western United States have high conservation value, particularly because of the highly endemic, and often endangered, fauna that they support. Refuges now protect these habitats from many of the human impacts that once threatened them, but invasive species often persist. Invasive saltcedar is ubiquitous along streams, rivers, and spring ecosystems of the western United States, yet the impact of saltcedar invasion on these ecosystems, or ecosystem response to its removal, have rarely been quantified. Along Jackrabbit Spring, a springbrook in Nevada that supports populations of two endangered fish (Ash Meadows pupfish and Ash Meadows speckled dace) as well as several exotic aquatic consumers, we quantified the response of aquatic consumers to largescale saltcedar removal and identified the mechanism underlying consumer response to the removal. Clearing saltcedar from the riparian zone increased densities of native pupfish and exotic screw snails, but decreased the density of exotic crayfish. Positive effects of saltcedar removal on pupfish and snails occurred because saltcedar heavily shades the stream, greatly reducing the availability of algae for herbivores. This was confirmed by analyses of potential organic matter sources and consumer 13C: pupfish and snails, along with native dace and exotic mosquitofish, relied heavily on algae-derived carbon and not saltcedar-derived carbon. By contrast, crayfish ??13C values mirrored algae ??13C during summer, but in winter indicated reliance on allochthonous saltcedar litter that dominated organic inputs in saltcedar reaches and on algae-derived carbon where saltcedar was absent. The seasonal use of saltcedar by crayfish likely explains its negative response to saltcedar removal. Clearing saltcedar effectively restored the springbrook of Jackrabbit Spring to the conditions characteristic of native vegetation sites. Given the high conservation value of spring ecosystems and the potential conservation benefits of saltcedar removal that this research highlights, eradicating saltcedar from spring ecosystems of the western United States should clearly be a management priority. ?? 2005 by the Ecological Society of America.

Ecological Applications↗

Geochemistry and occurrence of selenium: An overview

Selenium (Se) is both beneficial and toxic to animals, plants, and humans. Consequently, it is imperative to know its concentration in the environment and to understand the processes controlling its distribution. Determinations of Se concentrations in a variety of materials indicate that Se is widely distributed throughout the environment. The processes responsible for its distribution include volcanic activity, the burning of fossil fuels, the weathering of rocks and soils, groundwater transport, precipitation of minerals, adsorption, chemical or bacterial reduction and oxidation, and metabolic uptake and release by plants and animals. The importance of a particular process in controlling the distribution of Se is intimately linked to the speciation of Se, which is controlled by the pH and redox conditions of the environment. Selenium can exist as selenide (Se 2− ), elemental Se (Se 0 ), selenite (SeO 2− 3 ), and selenate (SeO 2− 4 ). Each oxidation state exhibits different chemical behavior. Selenide and elemental Se occur in acidic, reducing, and organic-rich environments. Metal selenides, Se-sulfides, and elemental Se are insoluble, and therefore biologically unavailable. For the pH and redox conditions of most soil and aquatic environments, SeO 2− 3 and SeO 2− 4 ; should be the dominant forms of Se. Selenite is immobilized by adsorption onto particles, particularly Fe oxyhydroxides. Selenate is highly mobile and biologically available because of the solubility of its salts and its weak adsorption by particles. Microbial action can change the speciation of Se through oxidation or reduction, or through the formation of organic Se compounds.

Book chapter↗

Atlantic walrus (Odobenus rosmarus rosmarus): A literature survey and status report

It is generally agreed that the genus Odobenus includes only one species, O. rosmarus . At least two subspecies are widely recognized: O. r. rosmarus , the Atlantic walrus, and O. r. divergens , the Pacific walrus. A third nominal subspecies, O. r. laptevi , the Laptev walrus, is designated by some Soviet researchers; and the taxonomic status of the Kara Sea walrus is undetermined. The range and abundance of nearly all walrus stocks have been seriously reduced by intensive human exploitation. The Atlantic walrus, the principal subject of this study, remains plentiful in only three known areas of concentration: northern Hudson Bay and northern Foxe Basin in the eastern Canadian Arctic, and the Thule district of northwest Greenland. This animal is no longer the object of large-scale commercial hunting, but is still subject to heavy subsistence hunting by native groups in some areas. The status of the walrus population in Canada was investigated in the 1950's and is believed to have changed little since that time. There are probably no more than about 10,000 walruses in Canadian waters, virtually all of them in the eastern arctic. The biology, ecology, and exploitation of walruses in the Thule district were studied during the 1940's, and some information is available concerning recent catch levels and hunting practices. The Polar Eskimos of north Greenland continue to organize much of their cultural and economic life around the hunting of walruses, and the species remains abundant in their area, numbering at least a few thousand. The walrus stocks off west Greenland and in the Greenland, Barents, and Kara seas are the most critically depleted. No systematic field investigations of walruses east of Greenland have been made since the Kara Sea and Franz Josef Land populations were studied in the mid-1930's. Opportunistic sighting records and compilations of historical catch information indicate that the herds of many tens of thousands that once inhabited Svalbard, Bear Island, Franz Josef Land, Novaya Zemlya, and other parts of the Eurasian Arctic have been very nearly extirpated. Measures to curb the international trade in walrus ivory and skins may benefit the Atlantic subspecies in Canada and north Greenland. Enforcement of existing regulations pertaining to hunting by aborigines, and perhaps the imposition of further restrictions on such activities, are necessary if the subspecies is to approach full recovery. Field studies in the northeast Atlantic and off west Greenland would help determine the current status of walruses and provide a better understanding of the requirements for their recovery in these areas. The Laptev walrus seems to have been reduced by overexploitation, but available information, most of it translated from Russian, is inconclusive. This subspecies was thought to number around 4,000 to 5,000 in 1975, and Soviet scientists have remarked on the need for a reduction in hunting pressure and protection of its habitat.

Wildlife Research Report↗

Patterns and scales of phytoplankton variability in estuarine: Coastal ecosystems

Phytoplankton variability is a primary driver of chemical and biological dynamics in the coastal zone because it directly affects water quality, biogeochemical cycling of reactive elements, and food supply to consumer organisms. Much has been learned about patterns of phytoplankton variability within individual ecosystems, but patterns have not been compared across the diversity of ecosystem types where marine waters are influenced by connectivity to land. We extracted patterns from chlorophyll- a series measured at 84 estuarine–coastal sites, using a model that decomposes time series into an annual effect, mean seasonal pattern, and residual “events.” Comparisons across sites revealed a large range of variability patterns, with some dominated by a recurrent seasonal pattern, others dominated by annual (i.e., year-to-year) variability as trends or regime shifts and others dominated by the residual component, which includes exceptional bloom events such as red tides. Why is the partitioning of phytoplankton variability at these three scales so diverse? We propose a hypothesis to guide next steps of comparative analysis: large year-to-year variability is a response to disturbance from human activities or shifts in the climate system; strong seasonal patterns develop where the governing processes are linked to the annual climate cycle; and large event-scale variability occurs at sites highly enriched with nutrients. Patterns of phytoplankton variability are therefore shaped by the site-specific relative importance of disturbance, annual climatology, and nutrient enrichment.

Estuaries and Coasts↗

Design and methods of the U.S. Geological Survey Northeast Stream Quality Assessment (NESQA), 2016

During 2016, as part of the National Water-Quality Assessment Project (NAWQA), the U.S. Geological Survey conducted the Northeast Stream Quality Assessment (NESQA) to investigate stream quality in the northeastern United States. The goal of the NESQA was to assess the health of wadeable streams in the region by characterizing multiple water-quality factors that are stressors to aquatic life and by evaluating the relation between these stressors and the condition of biological communities. Urbanization, agriculture, and human modifications to streamflow are anthropogenic changes that greatly affect water quality in the region; consequently, the study design primarily selected sites and targeted stressors associated with these activities. The NESQA built on a prior NAWQA study conducted in the region in 2014, the Atlantic Highlands flow-ecology study, which investigated the effects of anthropogenically modified flows on aquatic biological communities in primarily forested watersheds. Land-cover data for the NESQA were used to identify and select sites within the region that had watersheds ranging in levels of urban and agricultural development. A total of 95 sites were selected: 67 on streams in watersheds representing a range of urban land use, 13 on streams in watersheds with some degree of agricultural land use, and 15 on streams in predominantly forested watersheds with little development. Depending on land-cover characteristics, sites were sampled weekly for metal and organic contaminants, nutrients, and sediment for either a 9-week period that began the week of June 6, 2016, or a 4-week period that begin the week of July 11, 2016. Beginning August 1, 2016, and for about 2 weeks, an ecological survey was conducted at every site to assess stream habitat, and algal, benthic invertebrate, and fish communities. Additional samples collected during the ecological surveys were streambed sediment for chemical analysis and toxicity testing, and fish tissue for mercury analysis. This report describes the various study components and methods of the NESQA and describes a precursor effort for the Atlantic Highlands flow-ecology study. Details are presented for measurements of water quality, sediment chemistry, streamflow, and ecological surveys of stream biota and habitat, as well as processes of sample analysis, quality assurance and quality control, and data management.

Open-File Report↗

Synopsis of wetland functions and values: bottomland hardwoods with special emphasis on eastern Texas and Oklahoma

Bottomland hardwood wetlands are the natural cover type of many floodplain ecosystems in the southeastern United States. They are dynamic, productive systems that depend on intermittent flooding and moving water for maintenance of structure and function. Many of the diverse functions performed by bottomland hardwoods (e.g., flood control, sediment trapping, fish and wildlife habitat) are directly or indirectly valued by humans. Balanced decisions regarding bottomland hardwoods are often hindered by a limited ability to accurately specify the functions being performed by these systems and, furthermore, by an inability to evaluate these functions in economic terms. This report addresses these informational needs. It focuses on the bottomland hardwoods of eastern Texas and Oklahoma, serving as an introduction and entry to the literature. It is not intended to serve as a substitute for reference to the original literature. The first section of the report is a review of the major functions of bottomland hardwoods, grouped under the headings of hydrology, water quality, productivity, detritus, nutrients, and habitat. Although the hydrology of these areas is diverse and complex, especially with respect to groundwater, water storage at high flows can clearly function to attenuate peak flows, with possible reductions in downstream flooding damage. Water moving through a bottomland hardwood system carries with it various organic and inorganic constituents, including sediment, organic matter, nutrients, and pollutants. When waterborne materials are introduced to bottomland hardwoods (from river flooding or upland runoff), they may be retained, transformed, or transported. As a result, water quality may be significantly altered and improved. The fluctuating and flowing water regime of bottomland hardwoods is associated with generally high net primary productivity and rapid fluxes of organic matter and nutrients. These, in turn, support secondary productivity in the bottomland hardwoods and downstream through detrital export. A large number of studies detail the extensive utilization of bottomland hardwoods by animals. Several basic habitat components contribute to this support function, including: 1. Fluctuating water levels and permanent bodies of water, 2. Hard mast (e.g., acorns), 3. Dens and cavities, 4. High soil fertility, 5. Diversity of food and cover, 6. Predominance of woody plant communities, 7. Close proximity of diverse structural features, and 8. Linear features providing movement corridors. The second section of the report focuses on the bottomlands of eastern Texas and Oklahoma, including topics such as climate, soils, water resources, historical perspective, vegetation, and fauna. Considerable attention is given to structural characteristics in this section, in order to provide contrasts with bottomland hardwood ecosystems in other areas. In general, the bottomland hardwoods of eastern Texas and Oklahoma are very similar to those elsewhere in the southeastern United States. Differences include the occurrence and relative importance of some community types and plant species and the greater importance of reservoir construction as a source of bottomland hardwoods loss in eastern Texas and Oklahoma. Again, information on faunal utilization is extensive relative to the information available concerning other functions.

Oklahoma;Texas↗

Factors related to occurrence and distribution of selected bacterial and protozoan pathogens in Pennsylvania streams

The occurrence and distribution of fecal indicator bacteria (FIB) and bacterial and protozoan pathogens are controlled by diverse factors. To investigate these factors in Pennsylvania streams, 217 samples were collected quarterly from a 27-station water-quality monitoring network from July 2007 through August 2009. Samples were analyzed for concentrations of Escherichia coli (EC) and enterococci (ENT) indicator bacteria, concentrations of Cryptosporidium oocysts and Giardia cysts, and the presence of four genes related to pathogenic types of EC ( eae A, stx 2, stx 1, rfb O157 ) plus three microbial source tracking (MST) gene markers that are also associated with pathogenic ENT and EC ( esp , LTIIa, STII). Water samples were concurrently analyzed for basic water chemistry, physical measures of water quality, nutrients, metals, and a suite of 79 organic compounds that included hormones, pharmaceuticals, and antibiotics. For each sample location, stream discharge was measured by using standardized methods at the time of sample collection, and ancillary sample site information, such as land use and geological characteristics, was compiled. Samples exceeding recreational water quality criteria were more likely to contain all measured pathogen genes but not Cryptosporidium or Giardia (oo)cysts. FIB and Giardia density and frequency of eae A gene occurrence were significantly related to season. When discharge at a sampling location was high (>75th percentile of daily mean discharge), there were greater densities of FIB and Giardia , and the stx2 , rfb O157 , STII, and esp genes were found more frequently than at other discharge conditions. Giardia occurrence was likely related to nonpoint sources, which are highly influential during seasonal overland transport resulting from snowmelt and elevated precipitation in late winter and spring in Pennsylvania. When MST markers of human, swine, or bovine origin were present, samples more frequently carried the eae A, stx 2, stx 1, and rfb O157 genes, but no genes were related exclusively to an individual MST marker. The human source pharmaceuticals (HSPs) acetaminophen and caffeine were correlated with Giardia , and the presence of HSPs proved to be more useful than MST markers in distinguishing the occurrence of Giardia . The HSPs caffeine and carbamazepine were correlated with the sum total of pathogen genes detected in a sample, demonstrating the value of using HSPs as an indicator of fecally derived pathogens. Sites influenced by urban land use with less forest were more likely to have greater FIB and Giardia densities and sum of the array of pathogen genes. Sites dominated by shallow carbonate bedrock in the upstream catchment were likely to have greater FIB densities and higher sum totals of pathogen genes but no correlation with Giardia detection. Our study provides a range of specific environmental, chemical, geologic, and land-use variables related to occurrence and distribution of FIB and selected bacterial and protozoan pathogens in Pennsylvania streams. The information presented could be useful for resource managers in understanding bacterial and protozoan pathogen occurrence and their relation to fecal indicator bacteria in similar settings.

Pennsylvania↗

Sources, transformations, and hydrological processes that control stream nitrate and dissolved organic matter concentrations during snowmelt in an upland forest

We explored catchment processes that control stream nutrient concentrations at an upland forest in northeastern Vermont, USA, where inputs of nitrogen via atmospheric deposition are among the highest in the nation and affect ecosystem functioning. We traced sources of water, nitrate, and dissolved organic matter (DOM) using stream water samples collected at high frequency during spring snowmelt. Hydrochemistry, isotopic tracers, and end‐member mixing analyses suggested the timing, sources, and source areas from which water and nutrients entered the stream. Although stream‐dissolved organic carbon (DOC) and dissolved organic nitrogen (DON) both originated from leaching of soluble organic matter, flushing responses between these two DOM components varied because of dynamic shifts of hydrological flow paths and sources that supply the highest concentrations of DOC and DON. High concentrations of stream water nitrate originated from atmospheric sources as well as nitrified sources from catchment soils. We detected nitrification in surficial soils during late snowmelt which affected the nitrate supply that was available to be transported to streams. However, isotopic tracers showed that the majority of nitrate in upslope surficial soil waters after the onset of snowmelt originated from atmospheric sources. A fraction of the atmospheric nitrogen was directly delivered to the stream, and this finding highlights the importance of quick flow pathways during snowmelt events. These findings indicate that interactions among sources, transformations, and hydrologic transport processes must be deciphered to understand why concentrations vary over time and over space as well as to elucidate the direct effects of human activities on nutrient dynamics in upland forest streams.

Water Resources Research↗

Tektite 1, man-in-the-sea project: Marine Science Program

The Tektite experiment was designed to provide data for a number of behavioral, biomedical, and engineering studies in addition to the marine sciences program. Conditions for some of these studies were not altogether compatible with the program for the marine sciences. For example, isolation imposed by human behavioral studies precluded physical contact with the surface team, even though such contact was physically possible and desirable for the conduct of the marine sciences program. Isolation also imposed on the scientific team the duty of all in-habitat maintenance, both scheduled and unscheduled, thereby taking substantial time from scientific research. In addition, between 10 and 20 percent of the waking time was devoted to performance of psychological tests required for the biomedical studies. Most of the experiments were directed toward detecting potentially adverse changes and thus were accepted as necessary and desirable. The only health problem to affect the scientific program during the dive was a minor external ear infection contracted by all the divers. Nonetheless, the experiment demon. strated, at least to our satisfaction, the advantages of underwater habitation and saturation diving for biological and geological research. A major advantage is the opportunity for continuous monitoring of organisms or processes. In addition, underwater habitation provides for considerably more research time in the water than surface diving or intermittent bottom dwelling, and this advantage increases greatly as the depth of habitation increases. Even in the relatively shallow depths at which Tektite 1 was conducted, the undersea team could spend appreciably more time at work in the water than their colleagues on the surface. Finally, Tektite 1 demonstrated that the scientist who lives in the sea need not have the extensive qualifications of a professional diver. Of the four scientists of the in-habitat team, only Crew Chief Waller was so qualified; the other three had used scuba as a research tool, but on a relatively limited basis. Any healthy, well-conditioned marine scientist with a basic diving background is capable of extending his research into the shallow sea on a full-time basis. It is hoped that many such scientists will in the future be able to utilize the undersea laboratory.

Science↗

Community exposure to potential climate-driven changes to coastal-inundation hazards for six communities in Essex County, Massachusetts

Introduction Understanding if and how community exposure to coastal hazards may change over time is crucial information for coastal managers tasked with developing climate adaptation plans. This report summarizes estimates of population and asset exposure to coastal-inundation hazards associated with sea-level-rise and storm scenarios in six coastal communities of the Great Marsh region of Essex County, Massachusetts. This U.S. Geological Survey (USGS) analysis was conducted in collaboration with National Wildlife Federation (NWF) representatives, who are working with local stakeholders to develop local climate adaptation plans for the Towns of Salisbury, Newbury, Rowley, Ipswich, and Essex and the City of Newburyport (hereafter referred to as communities). Community exposure was characterized by integrating various community indicators (land cover and land use, population, economic assets, critical facilities, and infrastructure) with coastal-hazard zones that estimate inundation extents and water depth for three time periods. Estimates of community exposure are based on the presence of people, businesses, and assets in hazard zones that are calculated from geospatial datasets using geographic-information-system (GIS) tools. Results are based on current distributions of people and assets in hazard zones and do not take into account projections of human population, asset, or land-use changes over time. Results are not loss estimates based on engineering analysis or field surveys for any particular facility and do not take into account aspects of individual and household preparedness before an extreme event, adaptive capacity of a community during an event, or long-term resilience of individuals and communities after an event. Potential losses would match reported inventories only if all residents, business owners, public managers, and elected officials were unaware of what to do if warned of an imminent threat, failed to take protective measures during an extreme event, or failed to implement any long-term strategies to mitigate potential impacts. This analysis is intended to serve as a foundation for additional risk-related studies, plans, and mitigation efforts that are tailored to local needs. After a summary of the geospatial methods used in the analysis, results are organized by community so that local officials can easily use them in their local adaptation planning efforts.

Massachusetts↗

Global cycling and climate effects of aeolian dust controlled by biological soil crusts

Biological soil crusts (biocrusts) cover ~12% of the global land surface. They are formed by an intimate association between soil particles, photoautotrophic and heterotrophic organisms, and they effectively stabilize the soil surface of drylands. Quantitative information on the impact of biocrusts on the global cycling and climate effects of aeolian dust, however, is not available. Here, we combine the currently limited experimental data with a global climate model to investigate the effects of biocrusts on regional and global dust cycling under current and future conditions. We estimate that biocrusts reduce the global atmospheric dust emissions by ~60%, preventing the release of ~0.7 Pg dust per year. Until 2070, biocrust coverage is expected to be severely reduced by climate change and land-use intensification. The biocrust loss will cause an increased dust burden, leading to a reduction of the global radiation budget of around 0.12 to 0.22 W m−2, corresponding to about 50% of the total direct forcing of anthropogenic aerosols. This biocrust control on dust cycling and its climate impacts have important implications for human health, biogeochemical cycling and the functioning of the ecosystems, and thus should be considered in the modelling, mitigation and management of global change.

Nature Geoscience↗

The National Map: from geography to mapping and back again

When the means of production for national base mapping were capital intensive, required large production facilities, and had ill-defined markets, Federal Government mapping agencies were the primary providers of the spatial data needed for economic development, environmental management, and national defense. With desktop geographic information systems now ubiquitous, source data available as a commodity from private industry, and the realization that many complex problems faced by society need far more and different kinds of spatial data for their solutions, national mapping organizations must realign their business strategies to meet growing demand and anticipate the needs of a rapidly changing geographic information environment. The National Map of the United States builds on a sound historic foundation of describing and monitoring the land surface and adds a focused effort to produce improved understanding, modeling, and prediction of land-surface change. These added dimensions bring to bear a broader spectrum of geographic science to address extant and emerging issues. Within the overarching construct of The National Map, the U.S. Geological Survey (USGS) is making a transition from data collector to guarantor of national data completeness; from producing paper maps to supporting an online, seamless, integrated database; and from simply describing the Nation’s landscape to linking these descriptions with increased scientific understanding. Implementing the full spectrum of geographic science addresses a myriad of public policy issues, including land and natural resource management, recreation, urban growth, human health, and emergency planning, response, and recovery. Neither these issues nor the science and technologies needed to deal with them are static. A robust research agenda is needed to understand these changes and realize The National Map vision. Initial successes have been achieved. These accomplishments demonstrate the utility of The National Map to the Nation and give confidence in evolving its future applications.

Photogrammetric Engineering and Remote Sensing↗

A draft decision framework for the National Park Service Interior Region 5 bison stewardship strategy

The Department of the Interior Bison Conservation Initiative calls for its bureaus to plan and implement collaborative American bison conservation and to ensure involvement by tribal, state, and local governments and the public in that conservation. Four independently managed and geographically separated National Park Service (NPS) units in Interior Region 5 (IR5) preserve bison and other components of a formerly contiguous Great Plains landscape. Management of bison in IR5 parks has historically been specific to each park, and livestock and range management science informed much of the decision making. In the past two decades, NPS has shifted away from managing bison from this livestock-based perspective towards a wildlife stewardship approach, including ensuring their long-term adaptive potential and considering them as just one part of a complex ecosystem. This shift requires a more holistic and cooperative approach to stewardship that is challenging not only because of limitations in funding and fluctuations in leadership priorities, but also because of the constraints imposed by the parks’ relatively small, fenced areas. The IR5 NPS Bison Stewardship Strategy (“Strategy”) will help the NPS to meet its responsibilities in cooperative stewardship of bison. The Strategy will serve to organize and consolidate the NPS’s legal and policy responsibilities within a framework of collectively defined values and objectives to support the careful and transparent decision-making processes that both guide and transcend park-specific planning. This report describes a preliminary decision framework for the Strategy, including the context, the fundamental objectives, and a range of alternative strategies developed and considered through two workshops and a series of conference calls with NPS personnel, stakeholders, and outside experts with an interest in IR5 NPS bison stewardship. Although not the Strategy itself, this framework serves as the Strategy’s starting point and identifies 14 fundamental objectives, falling in four major themes: Persistence of Wild and Healthy Bison 1. Maximize the long-term persistence of bison in IR5 parks 2. Maximize the long-term adaptive capacity of bison in North America 3. Maximize the wildness of the bison herds 4. Maximize humane treatment of bison, while allowing natural processes to occur Supporting Tribal Buffalo Culture 5. Improve relationships, trust, and communication with Tribes to enhance shared stewardship of bison within and beyond IR5 6. Maximize the number of live, healthy bison that can be transferred to tribal herds Persistence of Native Ecological Communities and Processes 7. Maximize structural and compositional heterogeneity of native prairie plant communities across space and time within each park 8. Maximize the abundance and diversity of animal species of special concern 9. Minimize the loss of native grassland within each park 10. Minimize the abundance of exotic plants in the park landscape 11. Maximize riparian area and wetland integrity Public Outreach 12. Maximize the number of healthy, wild bison that are visible to the public 13. Maximize the safety of visitors 14. Maximize public understanding of the past, present, and future of bison and Native Americans in the Great Plains The terms “minimize” and “maximize” in these objectives describe the desired direction for each individual objective. Finding the right balance among these objectives and any others identified in further work is one of the central challenges in developing the Strategy. To that end, this report also demonstrates and describes potential methods for evaluating how well alternative strategies would achieve each of the fundamental objectives.

Natural Resource Report↗

Biological nitrogen fixation: rates, patterns and ecological controls in terrestrial ecosystems

New techniques have identified a wide range of organisms with the capacity to carry out biological nitrogen fixation (BNF)—greatly expanding our appreciation of the diversity and ubiquity of N fixers—but our understanding of the rates and controls of BNF at ecosystem and global scales has not advanced at the same pace. Nevertheless, determining rates and controls of BNF is crucial to placing anthropogenic changes to the N cycle in context, and to understanding, predicting and managing many aspects of global environmental change. Here, we estimate terrestrial BNF for a pre-industrial world by combining information on N fluxes with 15 N relative abundance data for terrestrial ecosystems. Our estimate is that pre-industrial N fixation was 58 (range of 40–100) Tg N fixed yr −1 ; adding conservative assumptions for geological N reduces our best estimate to 44 Tg N yr −1 . This approach yields substantially lower estimates than most recent calculations; it suggests that the magnitude of human alternation of the N cycle is substantially larger than has been assumed.

Philosophical Transactions of the Royal Society B:↗

Topographic lidar survey of the Chandeleur Islands, Louisiana, February 6, 2012

This Data Series Report contains lidar elevation data collected February 6, 2012, for Chandeleur Islands, Louisiana. Point cloud data in lidar data exchange format (LAS) and bare earth digital elevation models (DEMs) in ERDAS Imagine raster format (IMG) are available as downloadable files. The point cloud data—data points described in three dimensions—were processed to extract bare earth data; therefore, the point cloud data are organized into the following classes: 1– and 17–unclassified, 2–ground, 9–water, and 10–breakline proximity. Digital Aerial Solutions, LLC, (DAS) was contracted by the U.S. Geological Survey (USGS) to collect and process these data. The lidar data were acquired at a horizontal spacing (or nominal pulse spacing) of 0.5 meters (m) or less. The USGS conducted two ground surveys in small areas on the Chandeleur Islands on February 5, 2012. DAS calculated a root mean square error (RMSEz) of 0.034 m by comparing the USGS ground survey point data to triangulated irregular network (TIN) models built from the lidar elevation data. This lidar survey was conducted to document the topography and topographic change of the Chandeleur Islands. The survey supports detailed studies of Louisiana, Mississippi and Alabama barrier islands that resolve annual and episodic changes in beaches, berms and dunes associated with processes driven by storms, sea-level rise, and even human restoration activities. These lidar data are available to Federal, State and local governments, emergency-response officials, resource managers, and the general public.

Louisiana↗

Evaluation of Water Quality for Two St. Johns River Tributaries Receiving Septic Tank Effluent, Duval County, Florida

Tributary streamflow to the St. Johns River in Duval County is thought to be affected by septic tank leachate from residential areas adjacent to these tributaries. Water managers and the city of Jacksonville have committed to infrastructure improvements as part of a management plan to address the impairment of tributary water quality. In order to provide data to evaluate the effects of future remedial activities in selected tributaries, major ion and nutrient concentrations, fecal coliform concentrations, detection of wastewater compounds, and tracking of bacterial sources were used to document septic tank influences on the water quality of selected tributaries. The tributaries Fishing Creek and South Big Fishweir Creek were selected because they drain subdivisions identified as high priority locations for septic tank phase-out projects: the Pernecia and Murray Hill B subdivisions, respectively. Population, housing (number of residences), and septic tank densities for the Murray Hill B subdivision are greater than those for the Pernecia subdivision. Water-quality samples collected in the study basins indicate influences from ground water and septic tanks. Estimated concentrations of total nitrogen ranged from 0.33 to 2.86 milligrams per liter (mg/L), and ranged from less than laboratory reporting limit (0.02 mg/L) to 0.64 mg/L for total phosphorus. Major ion concentrations met the State of Florida Class III surface-water standards; total nitrogen and total phosphorus concentrations exceeded the U.S. Environmental Protection Agency Ecoregion XII nutrient criteria for rivers and streams 49 and 96 percent of the time, respectively. Organic wastewater compounds detected at study sites were categorized as detergents, antioxidants and flame retardants, manufactured polycarbonate resins, industrial solvents, and mosquito repellent. The most commonly detected compound was para-nonylphenol, a breakdown product of detergent. Results of wastewater sampling give evidence that stream water in the study basins is affected by septic tank effluent. Fecal coliform bacteria concentrations were measured on a monthly basis; of 115 samples, 63 percent exceeded the State of Florida fecal coliform bacteria standard for Class III surface waters of 800 colonies per 100 milliliters of water on any 1 day. Fecal coliform bacteria concentrations ranged from less than 20 colonies per 100 milliliters of sample to greater than or equal to 160,000 colonies per 100 milliliters of sample. Antibiotic resistance patterns of fecal coliform bacteria were used to identify the sources of fecal coliform bacteria. Significant sources of fecal coliform bacteria included wild animals, dogs, and humans. A majority of the fecal coliform bacteria were classified to be from human sources. Because the primary source of fecal coliform bacteria is from human sources, and most likely septic tank effluent, management of human sources may substantially improve microbiological water quality in both the Fishing Creek and South Branch Big Fishweir Creek basins.

Water-Resources Investigations Report↗

Reconnaissance investigation of water quality, bottom sediment, and biota associated with irrigation drainage in and near Humboldt Wildlife Management Area, Churchill and Pershing Counties, Nevada, 1990-91

A reconnaissance investigation was begun in 1990 to determine whether the quality of irrigation drainage in and near the Humboldt Wildlife Management Area, Nevada, has caused or has the potential to cause harmful effects on human health, fish, and wildlife or to impair beneficial uses of water. Samples of surface and ground water, bottom sediment, and biota collected from sites upstream and downstream from the Lovelock agricultural area were analyzed for potentially toxic trace elements. Also analyzed were radioactive substances, major dissolved constitu- ents, and nutrients in water, as well as pesticide residues in bottom sediment and biota. In samples from areas affected by irrigation drainage, the following constituents equaled or exceeded baseline concentrations or recommended standards for protection of aquatic life or propagation of wildlife--in water: arsenic, boron, dissolved solids, mercury, molybdenum, selenium, sodium, and un-ionized ammonia; in bottom sediment; arsenic and uranium; and in biota; arsenic, boron, and selenium. Selenium appears to be biomagnified in the Humboldt Sink wetlands. Biological effects observed during the reconnaissance included reduced insect diversity in sites receiving irrigation drainage and acute toxicity of drain water and sediment to test organisms. The current drought and upstream consumption of water for irrigation have reduced water deliveries to the wetlands and caused habitat degradation at Humboldt Wildlife Management Area. During this investigation. Humboldt and Toulon Lakes evaporated to dryness because of the reduced water deliveries.

Water-Resources Investigations Report↗

Power laws, discontinuities and regional city size distributions

Urban systems are manifestations of human adaptation to the natural environment. City size distributions are the expression of hierarchical processes acting upon urban systems. In this paper, we test the entire city size distributions for the southeastern and southwestern United States (1990), as well as the size classes in these regions for power law behavior. We interpret the differences in the size of the regional city size distributions as the manifestation of variable growth dynamics dependent upon city size. Size classes in the city size distributions are snapshots of stable states within urban systems in flux.

Journal of Economic Behavior and Organization↗