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USGS2018

Influence of river discharge on grass carp occupancy dynamics in south-eastern Iowa rivers

Despite the longstanding presence of grass carp Ctenopharyngodon idella in the Upper Mississippi River (UMR) watershed, information regarding their populations remains largely unknown, in part because capture is difficult. Occupancy models are a popular wildlife assessment tool to account for imperfect detections but have been slow to be adopted in fisheries. Herein, we used occupancy modelling to evaluate the influence of two environmental covariates (river discharge and water temperature) on grass carp occupancy, extinction, colonization, and detection at nine sites within south-eastern Iowa rivers from April to October 2014 and 2015. Grass carp were detected at least once at all but one site. The most parsimonious model indicated that grass carp colonization probability increased from 0.15 to 0.67 with increases in river discharge. In contrast, occupancy (0.20), extinction (0.29), and detection (0.50) probabilities were temporally constant. Models indicated that water temperatures did not influence grass carp extinction or colonization probabilities relative to river discharge. Cumulative grass carp detection probability approached 1.0, whereas conditional occupancy estimates were less than 0.1 when using five or more sampling transects. The use of a robust design occupancy model allowed us to estimate site occupancy rates of grass carp corrected for imperfect detections, while demonstrating the importance of river discharge for site colonization. These results can be used to assess the distribution of a cryptic fish while helping to guide grass carp sampling and removal efforts.

Iowa↗

USGS2010

The potential influence of changing climate on the persistence of salmonids of the inland west

The Earth's climate warmed steadily during the 20th century, and mean annual air temperatures are estimated to have increased by 0.6°C (Intergovernmental Panel on Climate Change, 2007). Although many cycles of warming and cooling have occurred in the past, the most recent warming period is unique in its rate and magnitude of change (Siegenthaler and others, 2005) and in its association with anthropogenic emissions of greenhouse gases (Intergovernmental Panel on Climate Change , 2007). The climate in the western United States warmed in concert with the global trend but at an accelerated rate (+0.8°C during the 20th century; Saunders and others, 2008). The region could also prove especially sensitive to future changes because the relatively small human population is growing rapidly, as are demands on limited water supplies. Regional hydrological patterns are dominated by seasonal snow accumulation at upper elevations. Most of the region is relatively dry, and both terrestrial and aquatic ecosystems are strongly constrained b y water availability (Barnett and others, 2008; Brown and others, 2008). Stream environments are dynamic and climatically extreme, and salmonid fishes are the dominant elements of the native biodiversity (McPhail and Lindsey, 1986; Waples and others, 2008). Salmonids have broad economic and ecologic importance, but a century of intensive water resource development, nonnative fish stocking, and land use has significantly reduced many populations and several taxa are now protected under the Endangered Species Act (Thurow and others, 1997; Trotter, 2008). Because salmonids require relatively pristine, cold water environments and are often isolated in headwater habitats, members of this group may be especially vulnerable to the effects of a warming climate (Keleher and Rahel, 1996; Rieman and others, 2007; Williams and others, 2009). Warming during the 20th century drove a series of environmental trends that have profound implications for many aspects of salmonid habitat, including disturbance regimes such as wildfire, and unfavorable changes to thermal and hydrologic properties of aquatic systems. Warmer air temperatures have been associated with decreased winter snow accumulations, have accelerated snowmelt, and have advanced the timing of peak runoff by several days to weeks across most of western North America (Stewart and others, 2005; Barnett and others, 2008). Less snow and earlier runoff decrease aquifer recharge, make less water available for groundwater inputs to streams, and are contributing to widespread decreases in summer low flows (Stewart and others, 2005; Rood and others, 2008; Luce and Holden 2009). Interannual variability in stream flow is increasing, as is the persistence of multi-year extreme conditions (McCabe and others, 2004; Pagano and Garen 2005). In many areas of western North America, flood risks have increased in association with warmer temperatures during the 20th century (Hamlet and Lettenmaier, 2005). Streams where midwinter temperatures are near freezing have proven especially sensitive to increased flooding because of associated transitional hydrological patterns (mixtures of rainfall and snowmelt) and propensity for occasional rain-on-snow events to rapidly melt winter snowpack and generate large floods (Hamlet and Lettenmaier, 2005). Stream temperatures in many areas are increasing (Peterson and Kitchell, 2001; Morrison and others, 2002; Bartholow, 2005; Kaushal and others, 2010), due to both air temperature increases and reduced summer flows that make streams more sensitive to warmer air temperatures (Isaak and others, 2010). In recent decades, wildfires have become more common across much of the western United States during periods of more frequent droughts (Westerling and others, 2006; Hoerling and Eischeid, 2007), and local stream temperature can increase in postfire environments (Gresswell, 1999; Dunham and others, 2007). Fire-related temperature increase within streams is commonly a transient phenomenon, lasting only until riparian vegetation has recovered (Gresswell, 1999); however, ongoing climate change could preclude recovery to higher stature, prefire vegetation types in some areas (McKenzie and others, 2004; van Mantgem and Stephenson, 2007), resulting in a loss of critical riparian shading. Additionally, when wildfires occur in steep mountain topographies, the vegetation that stabilize s soils on hillslopes is often killed and landslides become more prevalent (Gresswell, 1999). Landslides int o stream channels form debris flows composed of sediment slurries and dead trees that can scour channels to bedrock and further exacerbate stream heating, delay recovery of riparian areas, or extirpate fish populations (Gresswell, 1999; May and Gresswell, 2003; Dunham and others, 2007). Changes in stream environments will shift habitat distributions, sometimes unpredictably, in both time and space for many salmonid fishes. Water temperature fundamentally influences aquatic ecosystem health because distribution, reproduction, fitness, and survival of ectothermic organisms are inextricably linked to the thermal regime of the environment. Historically, research has focused on defining lethal thermal limits of salmonids (Eaton and others, 1995; Selong and others, 2001; Todd and others, 2008); however, water temperature is known to be important in biological processes at a variety of spatial scales and levels of biological organization (Rahel and Olden, 2008; McCullough and others, 2009). For instance, trout are affected directly by water temperature through feeding, metabolism, and growth rates, and indirectly by factors such as prey availability and species interactions (Wehrly and others, 2007; Rahel and Olden, 2008). Where cold water temperatures currently limit habitat suitability and distributions of some species (for example, at the highest and most northerly distributional extents; Nakano and others, 1996; Coleman and Fausch, 2007), a warming climate may gradually increase the quality and extent of suitable habitat. Over time, previously constrained populations are expected to expand into these new habitats and increase in number. Some evidence suggests this may already be happening in Alaska, where streams in recently deglaciated areas are being colonized by emigrants from nearby salmon and char populations (Milner and others, 2000). Unfortunately, many of the sensitive salmonid species that are often the focus of western managers are unlikely to benefit from future water temperature increases. Warmer stream temperatures will facilitate invasion by nonnative species that are broadly established in downstream areas into upstream areas where they will compete with native species (Rieman and others, 2006; Rahel and Olden, 2008; Fausch and others, 2009). In other cases, warmer stream temperatures will render thermally suitable habitats unsuitable in downstream areas and effect net losses of habitat because upstream distributions are often constrained by streams that are too small or steep (Hari and others, 2006; Isaak and others, 2010). Both scenarios are realistic for fish species like bull trout ( Salvelinus confluentus ) (Rieman and others, 2006; Rieman and others, 2007), the various subspecies of cutthroat trout ( Oncorhynchus clarkii ) (Williams and others, 2009), Gila trout ( Oncorhynchus gilae gilae ) (Kennedy and others, 2008), and Apache trout ( Oncorhynchus gilae apache ) (Rinne and Minckley, 1985; Carmichael and others, 1993). As native species are increasingly confined to smaller and more isolated habitats by a gradually warming climate, the effects of wildfires (whether related to lethal changes in water quality during a fire, channel debris flows, or chronic postfire warming ) could have greater proportional effects on remaining habitats (for example, Brown and others, 2001; Rieman and others, 2007). If these changes were accompanied by additional hydrologic alterations associated with changes to the magnitude, frequency, duration, timing, and rate of change of discharge patterns (Jager and others, 1999; Henderson and others, 2000), populations may begin to lose some of their historic resilience and become ever more susceptible to local extirpations. As dramatic and extensive as climatic and environmental trends are for salmonid habitats, global climate models (GCMs) project that many of these trends will continue and even accelerate until at least the middle of the 21st century (Intergovernmental Panel on Climate Change, 2007). Current projections suggest mean annual air temperatures will increase by an additional 1–3°C, and early indications are that climate trajectory is at the higher end of this range (Pittock, 2006; Raupach and others, 2007). Although predicted changes vary considerably, even the most conservative estimates suggest a warming rate that will be twice that observed during the 20th century. Projections for the midcentury are most certainly due to the effects of greenhouse gases already emitted or predicted in the short term, uncertainties of the effects of longer-term greenhouse gas emissions, short-term climate cycles, and process errors associated with climate models (Cox and Stephenson, 2007). Projections of changes in total precipitation are less certain than those for air temperatures, but most GCMs project relatively small changes in the Northwest, with the exception of slightly drier summer periods (Mote and others, 2008; Karl and others, 2009). In the Southwest, however, significant decreases (such as 15–30 percent ) are projected during most periods of the year, and this area is one of the few for which Intergovernmental Panel on Climate Change (2007) precipitation projections have a high level of certainty (Hoerling and Eischeid, 2007; Karl and others, 2009). Clearly, managers of native salmonids in the wester n United States should consider adjusting management strategies to accommodate a warmer and possibly drier future (Williams and others, 2009). Tools are needed to forecast where important changes may occur and how conservation efforts should be prioritized. In this Open-File Report, we document our initial efforts in this regard for 10 species and subspecies of inland trout and Montana Arctic grayling ( Thymallus arcticus ) across the western United States.

Arizona, California, Colorado, Idaho, Montana, Nev↗

USGS2018

Input data processing tools for the integrated hydrologic model GSFLOW

Integrated hydrologic modeling (IHM) encompasses a vast number of processes and specifications, variable in time and space, and development of models can be arduous. Model input construction techniques have not been formalized or made easily reproducible. Creating the input files for integrated hydrologic models requires complex GIS processing of raster and vector datasets from various sources. Developing stream network topology that is consistent with the model grid-scale digital elevation model (DEM) is important for robust simulation of surface water and groundwater exchanges. Distribution of meteorological data over the model domain is difficult in complex terrain at the model-grid scale, but is necessary for realistic simulations. As model development requires extensive GIS and computer programming expertise, the use of IHMs has mostly been limited to research groups with available financial, human, and technical resources. Here we present a series of open-source Python scripts that are combined with ESRI ArcGIS to provide a formalized technique for the parameterization and development of inputs for the readily available IHM called GSFLOW. This Python toolkit automates many of the necessary and laborious processes of parameterization, including stream network development, land coverages, and meteorological distribution over the model domain. The final products of the toolkit are PRMS ready Parameter Files, along with several input parameters for a MODFLOW model, including input for the Streamflow Routing Package. A demonstration of the toolkit is provided to illustrate its capabilities.

Environmental Modelling and Software↗

USGS2019

Phenology and species diversity in a Lake Huron ichthyoplankton community: Ecological implications of invasive species dominance

Ichthyoplankton communities are dynamic and vary spatiotemporally based on factors such as wind, water currents, and phenology. Nonetheless, ichthyoplankton are an indicator of spawning success in fish populations and examining their community diversity and composition can serve to provide information on ecosystem integrity. Although some ichthyoplankton species may be transient, understanding their distribution in space and time provides information on species composition, abundance, and habitat use during critical early life stages. We sampled the spring-summer ichthyoplankton community during 2008 and 2009 in northern Lake Huron to determine species succession, abundance, and species diversity along physical and environmental gradients. Seasonal succession of species was similar during both years, indicating well-defined patterns in spawning by local populations. Invasive alewife, rainbow smelt, and round goby were the dominant species during both years, with native stickleback species also abundant. Shannon Entropy (H’) increased with increasing water temperature until late summer when H’ declined. H’ decreased with increasing bottom depth and distance to tributary mouth indicating the important ecological role of these habitat features during early life stages. Although ichthyoplankton diversity was comparable to or higher than that reported for other areas of the Great Lakes, the prominence of invasive species in our study is reflective of the degraded state of the Lake Huron fish community, despite large reductions in invasive planktivorous fish since 2004. Continued monitoring of ichthyoplankton communities will be important for measuring the impacts of species invasions or other ecosystem stressors on fish community structure in the Great Lakes.

Lake Huron↗

USGS2013

Assessing the risk of nitrogen deposition to natural resources in the Four Corners area

Nitrogen (N) deposition in the western U.S. is on the rise and is already dramatically affecting terrestrial ecosystems. For example, N deposition has repeatedly been shown to lower air and water quality, increase greenhouse gas emissions, alter plant community composition, and significantly modify fire regimes. Accordingly, the effects of N deposition represent one of our largest environmental challenges and make difficult the National Park Service’s (NPS) important mission to “preserve the scenery and the natural and historic objects and the wildlife… unimpaired for the enjoyment of future generations”. Due to increased population growth and energy development (e.g., natural gas wells), the Four Corners region has become a notable ‘hotspot’ for N deposition. However, our understanding of how increased N deposition will affect these unique ecosystems, as well as how much deposition is actually occurring, remains notably poor. Here we used a multi-disciplinary approach to gathering information in an effort to help NPS safeguard the Four Corners national parks, both now and into the future. We applied modeling, field, and laboratory techniques to clarify current N deposition gradients and to help elucidate the ecosystem consequences of N deposition to the national parks of the Four Corners area. Our results suggest that NOx deposition does indeed represent a significant source of N to Mesa Verde National Park and, as expected, N deposition significantly affects coupled biogeochemical cycling (N, carbon, and phosphorus) of these landscapes. We also found some surprising results. For example, perhaps due to the low nutrient availability in these (and other) dryland ecosystems, although most other research suggests that adding N reduces N fixation rates, N additions did not consistently reduce natural N inputs via biological N2 fixation at our dryland sites. While the timeline of this pilot project is too brief to elucidate all the potential insight from the approach utilized here (e.g., we have fertilization plots to explore how N deposition affects Bromus tectorum invasion that will surely yield provoking results), we plan to continue this exciting line of questioning and expect further insight to be forthcoming.

Arches National Park, Canyonland National Park, Me↗

USGS2017

Late Quaternary environments in Ruby Valley, Nevada

Palynological data from sediment cores from the Ruby Marshes provide a record of environmental and climatic changes over the last 40,000 yr. The modern marsh waters are fresh, but no deeper than ???3 m. A shallow saline lake occupied this basin during the middle Wisconsin, followed by fresh and perhaps deep waters by 18,000 to 15,000 yr B.P. No sediments were recovered for the period between 15,000 and 11,000 yr B.P., possibly due to lake desiccation. By 10,800 yr B.P. a fresh-water lake was again present, and deeper-than-modern conditions lasted until 6800 yr B.P. The middle Holocene was characterized by very shallow water, and perhaps complete desiccation. The marsh system deepened after 4700 yr B.P., and fresh-water conditions persisted until modern times. Vegetation changes in Ruby Valley were more gradual than those seen in the paleolimno-logical record. Sagebrush steppe was more widespread than at present through the late Pleistocene and early Holocene, giving way somewhat to expanded shadscale vegetation between 8500 and 6800 yr B.P. Shadscale steppe contracted by 4000 yr B.P., but had greater than modern coverage until 1000 to 500 yr ago. Pinyon-juniper woodland was established in the southern Ruby Mountains by 4700 yr B.P. ?? 1992.

Quaternary Research↗

USGS2001

An evaluation of selenium concentrations in water, sediment, invertebrates, and fish from the Republican River Basin: 1997-1999

The Republican River Basin of Colorado,Nebraska, and Kansas lies in a valley which contains PierreShale as part of its geological substrata. Selenium is anindigenous constituent in the shale and is readily leached intosurrounding groundwater. The Basin is heavily irrigated throughthe pumping of groundwater, some of which is selenium-contaminated, onto fields in agricultural production. Water,sediment, benthic invertebrates, and/or fish were collected from46 sites in the Basin and were analyzed for selenium to determinethe potential for food-chain bioaccumulation, dietary toxicity,and reproductive effects of selenium in biota. Resultingselenium concentrations were compared to published guidelines orbiological effects thresholds. Water from 38% of the sites (n = 18) contained selenium concentrations exceeding 5 μg L -1 , which is reported to be a high hazard for selenium accumulation into the planktonic food chain. An additional 12 sites (26% of the sites) contained selenium in water between 3–5 μg L -1 , constituting a moderate hazard. Selenium concentrations in sedimentindicated little to no hazard for selenium accumulation fromsediments into the benthic food chain. Ninety-five percent ofbenthic invertebrates collected exhibited selenium concentrationsexceeding 3 μg g -1 , a level reported as potentially lethal to fish and birds that consume them. Seventy-five percent of fish collected in 1997, 90% in 1998, and 64% in 1999 exceeded 4 μg g -1 selenium, indicating a high potential for toxicity andreproductive effects. However, examination of weight profilesof various species of collected individual fish suggestedsuccessful recruitment in spite of selenium concentrations thatexceeded published biological effects thresholds for health andreproductive success. This finding suggested that universalapplication of published guidelines for selenium may beinappropriate or at least may need refinement for systems similarto the Republican River Basin. Additional research is needed todetermine the true impact of selenium on fish and wildliferesources in the Basin.

Environmental Monitoring and Assessment↗

USGS2012

Native rainbow smelt and nonnative alewife distribution related to temperature and light gradients in Lake Champlain

Alewife ( Alosa pseudoharengus ) recently became established in Lake Champlain and may compete with native rainbow smelt ( Osmerus mordax ) for food or consume larval rainbow smelt. The strength of this effect depends partly on the spatial and temporal overlap of different age groups of the two species; therefore, we need a better understanding of factors affecting alewife and rainbow smelt distributions in Lake Champlain. We used hydroacoustics, trawls, and gill nets to document vertical fish distribution, and recorded environmental data during 16 day–night surveys over two years. Temperature, temperature change, and light were all predictors of adult and age-0 rainbow smelt distribution, and temperature and light were predictors of age-0 alewives' distribution (based on GAMM models evaluated with AIC). Adult alewives were 5–30 m shallower and age-0 alewives were 2–15 m shallower than their rainbow smelt counterparts. Adult rainbow smelt distribution overlapped with age-0 rainbow smelt and age-0 alewives near the thermocline (10–25 m), whereas adult alewives were shallower (0–6 m) and overlapped with age-0 alewives and rainbow smelt in the epilimnion. Adult rainbow smelt were in water < 10–12 °C, whereas age-0 rainbow smelt were in 10–20 °C, and adult and age-0 alewives were in 15–22 °C water. Predicting these species distributions is necessary for quantifying the strength of predatory and competitive interactions between alewife and rainbow smelt, as well as between alewife and other fish species in Lake Champlain.

Vermont↗

USGS2005

Biogeochemical controls on diel cycling of stable isotopes of dissolved 02 and dissolved inorganic carbon in the Big Hole River, Montana

Rivers with high biological productivity typically show substantial increases in pH and dissolved oxygen (DO) concentration during the day and decreases at night, in response to changes in the relative rates of aquatic photosynthesis and respiration. These changes, coupled with temperature variations, may impart diel (24-h) fluctuations in the concentration of trace metals, nutrients, and other chemical species. A better understanding of diel processes in rivers is needed and will lead to improved methods of data collection for both monitoring and research purposes. Previous studies have used stable isotopes of dissolved oxygen (DO) and dissolved inorganic carbon (DIC) as tracers of geochemical and biological processes in streams, lakes, and marine systems. Although seasonal variation in δ 18 O of DO in rivers and lakes has been documented, no study has investigated diel changes in this parameter. Here, we demonstrate large (up to 13‰) cycles in δ 18 O-DO for two late summer sampling periods in the Big Hole River of southwest Montana and illustrate that these changes are correlated to variations in the DO concentration, the C-isotopic composition of DIC, and the primary productivity of the system. The magnitude of the diel cycle in δ 18 O-DO was greater in August versus September because of the longer photoperiod and warmer water temperatures. This study provides another biogeochemical tool for investigating the O 2 and C budgets in rivers and may also be applicable to lake and groundwater systems.

Montana↗

USGS2011

Fate of 4-nonylphenol and 17β-estradiol in the Redwood River of Minnesota

The majority of previous research investigating the fate of endocrine-disrupting compounds has focused on single processes generally in controlled laboratory experiments, and limited studies have directly evaluated their fate and transport in rivers. This study evaluated the fate and transport of 4-nonylphenol, 17β-estradiol, and estrone in a 10-km reach of the Redwood River in southwestern Minnesota. The same parcel of water was sampled as it moved downstream, integrating chemical transformation and hydrologic processes. The conservative tracer bromide was used to track the parcel of water being sampled, and the change in mass of the target compounds relative to bromide was determined at two locations downstream from a wastewater treatment plant effluent outfall. In-stream attenuation coefficients ( k stream ) were calculated by assuming first-order kinetics (negative values correspond to attenuation, whereas positive values indicate production). Attenuation of 17β-estradiol ( k stream = −3.2 ± 1.0 day –1 ) was attributed primarily due to sorption and biodegradation by the stream biofilm and bed sediments. Estrone ( k stream = 0.6 ± 0.8 day –1 ) and 4-nonylphenol ( k stream = 1.4 ± 1.9 day –1 ) were produced in the evaluated 10-km reach, likely due to biochemical transformation from parent compounds (17β-estradiol, 4-nonylphenolpolyethoxylates, and 4-nonyphenolpolyethoxycarboxylates). Despite attenuation, these compounds were transported kilometers downstream, and thus additive concentrations from multiple sources and transformation of parent compounds into degradates having estrogenic activity can explain their environmental persistence and widespread observations of biological disruption in surface waters.

Minnesota↗

USGS2022

Assessment of streamflow trends in the eastern Dakotas, water years 1960–2019

Hydrologic extremes, whether periods of drought or flooding, are occurring more frequently with greater severity and can have substantial economic impacts. Along with flooding, the timing and volume of streamflow also is changing across the United States. The focus of this report is to characterize a unique trend in mean annual streamflow occurring in eastern North and South Dakota, hereafter referred to as the eastern Dakotas, that is not being observed anywhere else in the conterminous United States. Streamflow records for 1,853 U.S. Geological Survey streamgages obtained from the U.S. Geological Survey National Water Information System database with a continuous record of mean annual streamflow during water years 1960–2019 were included in this study. Using a Kendall tau statistical test ( p -value less than or equal to 0.10), 573 streamgages had a statistically significant upward trend in mean annual streamflow and are primarily located in the Midwest and northeastern United States. Of the streamgages, 182 had a statistically significant downward trend and are located primarily in the western and southeastern States. Several sites had increases in streamflow between 100 and 500 percent. Most of the streamgages with the highest increases in mean annual streamflow are along the same rivers in the eastern Dakotas, regardless of basin size. A comparison of mean annual streamflow of the last decade (2010–19) to the first decade (1960–69) of the study period shows that the largest increases in annual streamflow volumes in the United States also are in the eastern Dakotas. Among all 1,853 streamgages in the United States, the Sheyenne River near Warwick, North Dakota (U.S. Geological Survey station 05056000), has the greatest percent change, with an increase of 486 percent. Several factors may be contributing to increasing trends in streamflow in the eastern Dakotas and may include, in part, precipitation changes owing to climatic variation within the region, geologic makeup of the subsurface, and land-use changes. A better understanding of these research areas will help producers, resource managers, and infrastructure engineers to make more informed environmental and economic decisions.

North Dakota, South Dakota↗

USGS2019

Reactivity of As and U co-occurring in mine wastes in northeastern Arizona

The reactivity of co-occurring arsenic (As) and uranium (U) in mine wastes was investigated using batch reactors, microscopy, spectroscopy, and aqueous chemistry. Analyses of field samples collected in proximity to mine wastes in northeastern Arizona confirm the presence of As and U in soils and surrounding waters, as reported in a previous study from our research group. In this study, we measured As (<0.500 to 7.77 μg/L) and U (0.950 to 165 μg/L) in waters, as well as mine wastes (<20.0 to 40.0 mg/kg As and <60.0 to 110 mg/kg U) and background solids (<20.0 mg/kg As and <60.0 mg/kg U). Analysis with X-ray fluorescence (XRF) and electron microprobe show the co-occurrence of As and U with iron (Fe) and vanadium (V). These field conditions served as a foundation for additional laboratory experiments to assess the reactivity of metals in these mine wastes. Results from laboratory experiments indicate that labile and exchangeable As(V) was released to solution when solids were sequentially reacted with water and magnesium chloride (MgCl 2 ), while limited U was released to solution with the same reactants. The predominance of As(V) in mine waste solids was confirmed by X-ray absorption near edge (XANES) analysis. Both As and U were released to solution after reaction of solids in batch experiments with HCO 3 − . Both X-ray photoelectron spectroscopy (XPS) and XANES analysis determined the predominance of Fe(III) in the solids. Mössbauer spectroscopy detected the presence of nano-crystalline goethite, Fe(II) and Fe(III) in (phyllo)silicates, and an unidentified mineral with parameters consistent with arsenopyrite or jarosite in the mine waste solids. Our results suggest that As and U can be released under environmentally relevant conditions in mine waste, which is applicable to risk and exposure assessment.

Arizona↗

USGS2021

Perfluoroalkyl substances in plasma of smallmouth bass from the Chesapeake Bay Watershed

Smallmouth bass Micropterus dolomieu is an economically important sportfish and within the Chesapeake Bay watershed has experienced a high prevalence of external lesions, infectious disease, mortality events, reproductive endocrine disruption and population declines. To date, no clear or consistent associations with contaminants measured in fish tissue or surface water have been found. Therefore, plasma samples from two sites in the Potomac River and two in the Susquehanna River drainage basins, differing in land-use characteristics, were utilized to determine if perfluoroalkyl substances were present. Four compounds, perfluorooctane sulphonic acid (PFOS), perfluoroundecanoic acid (PFUnA), perfluorodecanoic acid (PFDA) and perfluorododecanoic acid (PFDoA), were detected in every fish. Two additional compounds, perfluorooctane sulphonamide (PFOSA) and perfluorononanoic acid (PFNA), were less commonly detected at lower concentrations, depending on the site. Concentrations of PFOS (up to 574 ng/mL) were the highest detected and varied significantly among sites. No seasonal differences (spring versus fall) in plasma concentrations were observed. Concentrations of PFOS were not significantly different between the sexes. However, PFUnA and PFDoA concentrations were higher in males than females. Both agricultural and developed land-use appeared to be associated with exposure. Further research is needed to determine if these compounds could be affecting the health of smallmouth bass and identify sources.

New York, Pennsylvania, Maryland, Virginia↗

USGS2016

Analysis of environmental factors influencing salinity patterns, oyster growth, and mortality in lower Breton Sound Estuary, Louisiana using 20 years of data

Freshwater inflow characteristics define estuarine functioning by delivering nutrients, sediments, and freshwater, which affect biological resources and ultimately system production. Using 20 years of water quality, weather, and oyster growth and mortality data from Breton Sound Estuary (BSE), Louisiana, we examined the relationship of riverine, weather, and tidal influence on estuarine salinity, and the relationship of salinity to oyster growth and mortality. Mississippi River discharge was found to be the most important factor determining salinity patterns over oyster grounds within lower portions of BSE, with increased river flow associated with lowered salinities, while easterly winds associated with increased salinity were less influential. These patterns were consistent throughout the year. Salinity and temperature (season) were found to critically control oyster growth and mortality, suggesting that seasonal changes to river discharge affecting water quality over the oyster grounds have profound impacts on oyster populations. The management of oyster reefs in estuaries (such as BSE) requires an understanding of how estuarine hydrodynamics and salinity are influenced by forcing factors such as winds, river flow, and by the volume, timing, and location of controlled releases of riverine water.

Louisiana↗

USGS2018

Divergent effects of land-use, propagule pressure, and climate on woody riparian invasion

Landscape-scale analyses of biological invasion are needed to understand the relative importance of environmental drivers that vary at larger scales, such as climate, propagule pressure, resource availability, and human disturbance. One poorly understood landscape-scale question is, how does human land-use influence riparian plant invasion? To evaluate the relative importance of land-use, climate, propagule pressure, and water availability in riparian invasion, we examined tamarisk ( Tamarix ramosissima, T. chinensis , hybrids), Russian olive ( Elaeagnus angustifolia ), and Siberian elm ( Ulmus pumila ) occurrence, abundance, and dominance in 238 riparian sites in developed, cultivated, and undeveloped areas of four western USA river basins (281,946 km 2 ). Temperature and propagule pressure from individuals planted nearby largely drove invasive species occurrence, whereas factors likely to affect resource availability (e.g., land-use, precipitation, streamflow intermittency) were more important to abundance and dominance, supporting the argument that species distribution models based on occurrence alone may fail to identify conditions where invasive species have the greatest impact. The role of land-use varied among taxa: urban and suburban land-use increased Siberian elm occurrence, abundance, and dominance, and urban land-use increased Russian olive occurrence, whereas suburban land-use reduced tamarisk dominance. Surprisingly, Siberian elm, which has received scant prior scientific and management attention, occurred as or more frequently than tamarisk and Russian olive (except in undeveloped areas of the Colorado River headwaters) and had higher density and dominance than tamarisk and Russian olive in developed areas. More research is needed to understand the impacts of this largely unrecognized invader on riparian ecosystem services, particularly in urban and suburban areas.

Colorado, New Mexico↗

USGS2026

Effects of carbamazepine to visual function in early life stage fish

The frequent detection of pharmaceuticals and personal care products (PPCPs) in the environment raises concern for aquatic systems. Carbamazepine (CBZ), an antiepileptic drug, is among the most detected PPCP globally, with concentrations in surface water exceeding those that induce toxicity to aquatic organisms. Non-targeted transcriptomic profiling was conducted in zebrafish ( Danio rerio ) larvae exposed to 0, 1, 5, 10, or 50 μg/L CBZ from 2 h post fertilization (hpf) through hatching, and then sampled at 48, 72, or 144 hpf. Transcriptomic profiles were annotated and characterized with in silico bioinformatic software to assess top enriched pathways and identify targets of environmentally relevant concentrations of CBZ and anchor molecular effects to higher levels of biological organization. Based on this analysis, CBZ was predicted to impair visual perception and sensory system development. The number of eye saccades, determined with a visually mediated behavioral assay, optokinetic response, was significantly reduced in 144 hpf larvae exposed to concentrations as low as 1 μg/L CBZ. These results indicate that environmentally relevant concentrations of CBZ may target and impact processes involved in visual function in fish.

Environmental Research↗

USGS2014

Evaluation of a model framework to estimate soil and soil organic carbon redistribution by water and tillage using 137 Cs in two U.S. Midwest agricultural fields

Cultivated lands in the U.S. Midwest have been affected by soil erosion, causing soil organic carbon (SOC) redistribution in the landscape and other environmental and agricultural problems. The importance of SOC redistribution on soil productivity and crop yield, however, is still uncertain. In this study, we used a model framework, which includes the Unit Stream Power-based Erosion Deposition (USPED) and the Tillage Erosion Prediction (TEP) models, to understand the soil and SOC redistribution caused by water and tillage erosion in two agricultural fields in the U.S. Midwest. This model framework was evaluated for different digital elevation model (DEM) spatial resolutions (10-m, 24-m, 30-m, and 56-m) and topographic exponents ( m = 1.0–1.6 and n = 1.0–1.3) using soil redistribution rates from 137 Cs measurements. The results showed that the aggregated 24-m DEM, m = 1.4 and n = 1.0 for rill erosion, and m = 1.0 and n = 1.0 for sheet erosion, provided the best fit with the observation data at both sites. Moreover, estimated average SOC redistributions were 1.3 ± 9.8 g C m − 2 yr − 1 in field site 1 and 3.6 ± 14.3 g C m − 2 yr − 1 in field site 2. Spatial distribution patterns showed SOC loss (negative values) in the eroded areas and SOC gain (positive value) in the deposition areas. This study demonstrated the importance of the spatial resolution and the topographic exponents to estimate and map soil redistribution and the SOC dynamics throughout the landscape, helping to identify places where erosion and deposition from water and tillage are occurring at high rates. Additional research is needed to improve the application of the model framework for use in local and regional studies where rainfall erosivity and cover management factors vary. Therefore, using this model framework can help to improve the information about the spatial distribution of soil erosion across agricultural landscapes and to gain a better understanding of SOC dynamics within eroding and previously eroded fields.

Iowa↗

USGS2023

Using public litigation records to identify priority science needs for managing public lands

Relevant science is essential for effective natural resource decision making, including on public lands managed by the United States Department of the Interior (DOI) Bureau of Land Management (BLM), that cover 1/10th of the United States. Most of the BLM’s management decisions require analyses under the National Environmental Policy Act, and the use of science in these decisions is often challenged. Using coproduction, we assembled an interagency team of scientists and resource managers to develop a method for using public litigation to identify priority science needs for the BLM. We searched publicly available case documents finalized from 2015–2019 in Wyoming, Colorado, Utah, and New Mexico within federal courts and the DOI Office of Hearings and Appeals, and identified 108 case documents that involved challenges to the BLM’s use of science. We retained 48 case documents that contained at least one challenge about the BLM’s use of science for a specific resource. We categorized all challenges in each case document according to the proposed action, affected resource, type of science challenged (data about resources, science relevant to potential impacts, methods for analyzing potential impacts, and mitigation actions), and specific nature of the challenge (e.g., challenging direct effects analysis). We identified priority science needs based on the frequency of challenges, the number of states where similar challenges occurred, whether the BLM lost the challenge, and whether the case was remanded. Top needs related to oil and gas development actions and included science about effects on air quality and climate, water, and socioeconomics; data for air quality and climate; and methods for analyzing potential impacts to cultural resources and air quality and climate. The BLM can use this information to prioritize actions (e.g., funding new research or science syntheses) to strengthen its science foundation for decision-making.

Colorado, New Mexico, Utah, Wyoming↗