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Development of a national, dynamic reservoir-sedimentation database

The importance of dependable, long-term water supplies, coupled with the need to quantify rates of capacity loss of the Nation’s re servoirs due to sediment deposition, were the most compelling reasons for developing the REServoir- SEDimentation survey information (RESSED) database and website. Created under the auspices of the Advisory Committee on Water Information’s Subcommittee on Sedimenta ion by the U.S. Geological Survey and the Natural Resources Conservation Service, the RESSED database is the most comprehensive compilation of data from reservoir bathymetric and dry-basin surveys in the United States. As of March 2010, the database, which contains data compiled on the 1950s vintage Soil Conservation Service’s Form SCS-34 data sheets, contained results from 6,616 surveys on 1,823 reservoirs in the United States and two surveys on one reservoir in Puerto Rico. The data span the period 1755–1997, with 95 percent of the surveys performed from 1930–1990. The reservoir surface areas range from sub-hectare-scale farm ponds to 658 km 2 Lake Powell. The data in the RESSED database can be useful for a number of purposes, including calculating changes in reservoir-storage characteristics, quantifying sediment budgets, and estimating erosion rates in a reservoir’s watershed. The March 2010 version of the RESSED database has a number of deficiencies, including a cryptic and out-of-date database architecture; some geospatial inaccuracies (although most have been corrected); other data errors; an inability to store all data in a readily retrievable manner; and an inability to store all data types that currently exist. Perhaps most importantly, the March 2010 version of RESSED database provides no publicly available means to submit new data and corrections to existing data. To address these and other deficiencies, the Subcommittee on Sedimentation, through the U.S. Geological Survey and the U.S. Army Corps of Engineers, began a collaborative project in November 2009 to modernize the RESSED database architecture; provide public online input capability; and produce online reports. The ultimate goal of the Subcommittee on Sedimentation is to build a comprehensive, quality-assured database describing capacity changes over time for the largest suite of the Nation’s reservoirs.

Conference Paper↗

Annotated bibliography of scientific research on greater sage-grouse published since January 2015

The greater sage-grouse ( Centrocercus urophasianus ; hereafter GRSG) has been a focus of scientific investigation and management action for the past two decades. The 2015 U.S. Fish and Wildlife Service listing determination of “not warranted” was in part due to a large-scale collaborative effort to develop strategies to conserve GRSG populations and their habitat and to reduce threats to both. New scientific information augments existing knowledge and can help inform updates or modifications to existing plans for managing GRSG and sagebrush ecosystems. However, the sheer number of scientific publications can be a challenge for managers tasked with evaluating and determining the need for potential updates to existing planning documents. To assist in this process, the U.S. Geological Survey (USGS) has reviewed and summarized the scientific literature published since January 1, 2015. To identify articles and reports published about GRSG, we first conducted a structured search of three reference databases (Web of Science, Scopus, and Google Scholar) using the search term “greater sage-grouse.” We refined the initial list of products by (1) removing duplicates, (2) excluding products that were not published as research or scientific review articles in peer-reviewed journals or as formal government technical reports, and (3) retaining only those products for which GRSG or their habitat was a research focus. We summarized the contents of each product by using a consistent structure (background, objectives, methods, location, findings, and implications) and assessed the content of each product relevant to a list of 31 management topics. These topics include GRSG biology and habitat characteristics along with potential management actions, land uses, and environmental factors related to GRSG management and conservation. We also noted which articles/reports created new geospatial data. The final search was conducted on January 6, 2018, and application of our criteria resulted in the inclusion of 169 published products (2 of these products were published corrections to journal articles). The management topics most commonly addressed were GRSG behavior or demographics and GRSG habitat selection or habitat characteristics at broad or site scales. Few products addressed captive breeding, recreation, wild horses and burros, and range management structures (including fences). We include in this annotated bibliography the full citation, product summary, and management topics addressed by each product. The online version of this bibliography ( https://apps.usgs.gov/gsgbib/index.php ) is searchable by topic and location and includes links to the original publications. A substantial body of literature has been compiled based on research explicitly related to the conservation, management, monitoring, and assessment of GRSG. These studies may inform planning and management actions that seek to balance conservation, economic, and social objectives and manage diverse resource uses and values across the western United States. The review process for this product included requesting input on each summary from one or more authors of the original peer-reviewed article or report and a formal review of the entire document by three independent reviewers and, subsequently, the USGS Bureau Approving Official. This process is consistent with USGS Fundamental Science Practices.

Open-File Report↗

Water-quality data from oil and gas wells in part of the Permian Basin, southeastern New Mexico and western Texas

Approximately 8,000 chemical analyses of water produced from formations of several geologic ages in south eastern New Mexico and western Texas are tabulated by both geographic location and geologic formation. Empirical and mathematical relationships between (1) the dissolved solids and the measured and computed resistivity of water, the chloride-ion concentration and the density, and (2) the concentration of chloride-ion and the density and the resistivity of water, were established. Resistivities of water computed following a method developed by Moore, Szasz, and Whitney (1966) using the concentration of the six most common constituents dissolved in natural water correlate favorably with the measured resistivities of natural water. The water analyses were obtained chiefly from oil companies and oil-service companies operating in the western part of the Permian basin. The data were associated with the proper well by searching location, operator, and reference number cross indexes prepared from the Permian Basin Well Data System files. The cross indexes were determined to be essential to efficient data processing operations. After preliminary screening for nonrepresentative data, all data were indexed to the Permian Basin Well Data System magnetic tape file scout records by the unique reference number. The data were then coded, punched into tabulating cards, and stored on magnetic tape for computer operations. Data verification steps not normally required when using data received from a laboratory following standardized analytical techniques on samples obtained under standardized and controlled procedures were performed in order to upgrade reliability of the information. Data errors detected included poorly located or identified samples; mistakes including reproducing, or key punching; laboratory errors; inconsistent reporting; and nonrepresentative or contaminated samples.

New Mexico, Texas↗

Methods for Estimating Water Withdrawals for Aquaculture in the United States, 2005

Aquaculture water use is associated with raising organisms that live in water - such as finfish and shellfish - for food, restoration, conservation, or sport. Aquaculture production occurs under controlled feeding, sanitation, and harvesting procedures primarily in ponds, flow-through raceways, and, to a lesser extent, cages, net pens, and tanks. Aquaculture ponds, raceways, and tanks usually require the withdrawal or diversion of water from a ground or surface source. Most water withdrawn or diverted for aquaculture production is used to maintain pond levels and/or water quality. Water typically is added for maintenance of levels, oxygenation, temperature control, and flushing of wastes. This report documents methods used to estimate withdrawals of fresh ground water and surface water for aqua-culture in 2005 for each county and county-equivalent in the United States, Puerto Rico, and the U.S. Virgin Islands by using aquaculture statistics and estimated water-use coefficients and water-replacement rates. County-level data for commercial and noncommercial operations compiled for the 2005 Census of Aquaculture were obtained from the National Agricultural Statistics Service. Withdrawals of water used at commercial and noncommercial operations for aquaculture ponds, raceways, tanks, egg incubators, and pens and cages for alligators were estimated and totaled by ground-water or surface-water source for each county and county equivalent. Use of the methods described in this report, when measured or reported data are unavailable, could result in more consistent water-withdrawal estimates for aquaculture that can be used by water managers and planners to determine water needs and trends across the United States. The results of this study were distributed to U.S. Geological Survey water-use personnel in each State during 2007. Water-use personnel are required to submit estimated withdrawals for all categories of use in their State to the U.S. Geological Survey National Water-Use Information Program for inclusion in a national report describing water use in the United States during 2005. Water-use personnel had the option of submitting the estimates determined by using the methods described in this report, a modified version of these estimates, their own set of estimates, or reported data for the aquaculture category. Estimated withdrawals resulting from the method described in this report are not presented herein to avoid potential inconsistencies with estimated withdrawals for aquaculture that will be presented in the national report, as different methods used by water-use personnel may result in different withdrawal estimates. Estimated withdrawals also are not presented to avoid potential disclosure of confidential information for individual aquaculture operations.

Scientific Investigations Report↗

Flood-inundation maps and updated components for a flood-warning system or the City of Marietta, Ohio and selected communities along the Lower Muskingum River and Ohio River

Digital flood-inundation maps for lower reaches of the Muskingum River and a reach of the Ohio River in southeast Ohio were created by the U.S. Geological Survey (USGS), in cooperation with the Muskingum Watershed Conservancy District and the City of Marietta, Ohio. To complete the inundation maps, Ohio River and lower Muskingum River bathymetry was updated and two streamgages, one on the Ohio River upstream of Marietta near Sardis, Ohio, and one on the Muskingum River in Beverly, Ohio, were added as basic components of the flood-warning system. An updated hydraulic model component also led to the new flood-inundation maps. The maps, which can be accessed through the USGS Flood Inundation Mapping Science Web site at http://water.usgs.gov/osw/flood_inundation/ depict estimates of the areal extent of flooding corresponding to water levels (stages) at one or more of the following USGS streamgages: Muskingum River at McConnelsville, Ohio (03150000); Muskingum River at Beverly, Ohio (03150500); and Ohio River at Marietta, Ohio (03150700). The maps can be used in conjunction with National Weather Service flood-forecast data to show areas of estimated flood inundation associated with forecasted flood-peak stages. Flood profiles for selected reaches were prepared by calibrating steady-state step-backwater models to selected streamgage rating curves. The step-backwater models were used to determine water-surface-elevation profiles for up to 12 flood stages at a streamgage with corresponding stream-flows ranging from approximately the 10- to 0.2-percent chance annual-exceedance probabilities for each of the 3 streamgages that correspond to the flood-inundation maps. Additional hydraulic modeling was used to account for the effects of backwater from the Ohio River on water levels in the Muskingum River. The computed longitudinal profiles of flood levels were used with a Geographic Information System digital elevation model (derived from light detection and ranging) to delineate flood-inundation areas. Digital maps showing flood-inundation areas overlain on digital orthophotographs were prepared for the selected floods.

Ohio↗

Flood-Inundation Maps for the North River in Colrain, Charlemont, and Shelburne, Massachusetts, From the Confluence of the East and West Branch North Rivers to the Deerfield River

A series of 10 digital flood-inundation maps were developed for a 3.3-mile reach of the North River in Colrain, Charlemont, and Shelburne, Massachusetts, by the U.S. Geological Survey in cooperation with the Federal Emergency Management Agency. The coverage of the maps extends from the confluence of the East and West Branch North Rivers to the Deerfield River. Peak-flow estimates at the 50-, 20-, 10-, 4-, 2-, 1-, 0.5-, and 0.2-percent annual exceedance probabilities were computed for the reach from updated flood-frequency analyses. These peak flows were routed through a one-dimensional step-backwater hydraulic model to obtain the corresponding peak water-surface elevations and to place the tropical storm Irene flood of August 28, 2011, into historical context. The hydraulic model was calibrated by using the current [2015] stage-discharge relation at the U.S. Geological Survey streamgage North River at Shattuckville, MA (station number 01169000), and from documented high-water marks from the tropical storm Irene flood, which had a peak flow with approximately a 0.2-percent annual exceedance probability. A hydraulic model was used to compute water-surface profiles for 10 flood stages referenced to the streamgage and ranging from 6.6 feet (ft; 464.5 ft North American Vertical Datum of 1988 [which is approximately bankfull]) to 18.3 ft (476.2 ft North American Vertical Datum of 1988 [which is the stage of the 0.2-percent annual exceedance probability peak flow and exceeds the maximum recorded water level at the streamgage and the National Weather Service major flood stage of 13.0 ft]. The mapped stages of 6.6 to 18.3 ft were selected to match the stages of flows for bankfull; the 50-, 20-, 10-, 4-, 2-, 1-, 0.5-, and 0.2-percent annual exceedance probabilities; and an incremental stage of 17.0 ft. The simulated water-surface profiles were combined with a geographic information system digital elevation model derived from light detection and ranging (lidar) data with a 0.5-ft vertical accuracy to create a set of flood-inundation maps. The availability of the flood-inundation maps, combined with information regarding near-real-time stage from the U.S. Geological Survey North River at Shattuckville, MA streamgage can provide emergency management personnel and residents with information that is critical for flood response activities, such as evacuations and road closures, and postflood recovery efforts. The flood-inundation maps are nonregulatory, but provide Federal, State, and local agencies and the public with estimates of the potential extent of flooding during selected peak-flow events. Introduction

Massachusetts↗

Post-disaster supply chain interdependent critical infrastructure system restoration: A review of data necessary and available for modeling

The majority of restoration strategies in the wake of large-scale disasters have focused on short-term emergency response solutions. Few consider medium- to long-term restoration strategies to reconnect urban areas to national supply chain interdependent critical infrastructure systems (SCICI). These SCICI promote the effective flow of goods, services, and information vital to the economic vitality of an urban environment. To re-establish the connectivity that has been broken during a disaster between the different SCICI, relationships between these systems must be identified, formulated, and added to a common framework to form a system-level restoration plan. To accomplish this goal, a considerable collection of SCICI data is necessary. The aim of this paper is to review what data are required for model construction, the accessibility of these data, and their integration with each other. While a review of publicly available data reveals a dearth of real-time data to assist modeling long-term recovery following an extreme event, a significant amount of static data does exist and these data can be used to model the complex interdependencies needed. For the sake of illustration, a particular SCICI (transportation) is used to highlight the challenges of determining the interdependencies and creating models capable of describing the complexity of an urban environment with the data publicly available. Integration of such data as is derived from public domain sources is readily achieved in a geospatial environment, after all geospatial infrastructure data are the most abundant data source and while significant quantities of data can be acquired through public sources, a significant effort is still required to gather, develop, and integrate these data from multiple sources to build a complete model. Therefore, while continued availability of high quality, public information is essential for modeling efforts in academic as well as government communities, a more streamlined approach to a real-time acquisition and integration of these data is essential.

Data Science Journal↗

Results of a survey of U.S. Fish and Wildlife Service Endangered Species and Ecological Services Field Offices, Refuges, Hatcheries, and Research Centers

The National Ecology Research Center (Center), as part of an ongoing research study on the effects of low altitude aircraft operations on fish and wildlife, conducted a survey in January 1987 of all U.S. Fish and Wildlife Service (Service) regional directors, research center directors, Ecological Services and Endangered Species field offices supervisors, refuge manager, and hatchery manager. The objective of the survey was to determine the nature and extent of aircraft-induced impacts on fish and wildlife species, populations, and habitat utilization. The field installation managers and biologists were asked to provide background information or data on fish and wildlife reactions to low-altitude aircraft disturbances, including physiological, behavioral, and reproductive/population effects. Specifically, the survey asked for information such as: (1) observations of animal reaction(s) to aircraft operations, e.g., desert bighorn sheep scare behavior in response to aircraft overflights and hatchery fish seizures and death following intense sonic booms; and instances of areas where aircraft noise is known or believed to be responsible for reduced population size, e.g. areas along heavily used aircraft flight corridors where breeding waterfowl densities are lower than in similar habitat away from the noise area.

Report↗

Haliaeetus leucocephalus (bald eagle) and Aquila chrysaetos (golden eagle) mortality and exposure to lead, mercury, and anticoagulant rodenticides in eight western and midwestern States, 2014–17

The U.S. Geological Survey National Wildlife Health Center measured environmental contaminants in Haliaeetus leucocephalus (bald eagles) and Aquila chrysaetos (golden eagles) to evaluate dietary exposure to lead, mercury, and anticoagulant rodenticides (AR), all of which were identified by U.S. Fish and Wildlife Service as a priority issue of concern for Mountain Prairie Region 6. Data were needed to inform U.S. Fish and Wildlife Service regional programs aimed at reducing exposure to these substances. Carcasses of bald eagles ( n =172) and golden eagles ( n =142) collected from North and South Dakota, Montana, Wyoming, Colorado, Utah, Nebraska, and Kansas between 2014 and 2017 were assessed for cause of death and liver lead, mercury, and AR level concentrations. Trauma, electrocution, and lead poisoning were the three leading causes of death, affecting 51 percent, 21 percent, and 20 percent of eagles, respectively. Trauma was the leading cause of death for both species, whereas lead poisoning was the second leading cause of death for bald eagles (31 percent) and was only diagnosed as the cause of death in 7 percent of golden eagles. Elevated lead concentrations within the range of subclinical or clinical poisoning (greater than [>] 2 milligrams per kilogram [mg/kg] wet weight) were present in 25 percent of eagles tested, including 36 percent of bald eagles and 11 percent of golden eagles. No association was detected among lead exposure and trauma, electrocution, or infectious disease. Mercury concentrations were considered high (>80 mg/kg dry weight) for only 2 percent of bald eagles and no golden eagles. Brodifacoum was the most common AR detected, present in 56 percent of eagles, including 70 percent of bald eagles and 39 percent of golden eagles; however, death was not directly attributed to AR toxicosis in any case. Results of this study provide baseline data on common causes of mortality and threats to eagles in Region 6 from lead, mercury, and rodenticide exposure and can be used to inform management decisions.

Open-File Report↗

Estimated hydrogeologic, spatial, and temporal distribution of self-supplied domestic groundwater withdrawals for aquifers of the Virginia Coastal Plain

Water use from private-domestic wells accounts for nearly 40 percent of total groundwater withdrawals in the Virginia Coastal Plain Physiographic Province (henceforth called the Virginia Coastal Plain). However, because self-supplied domestic water use generally falls below the Virginia Department of Environmental Quality (VDEQ) reporting and management threshold of 300,000 gallons per month, quantifying these withdrawals is challenging. This report builds upon the foundation of previous U.S. Geological Survey investigations by providing revised techniques to improve estimates of the aquifer source, spatial distribution, and monthly magnitude of these groundwater withdrawals. The aquifer sources of private-domestic wells in the Virginia Coastal Plain were estimated by cross-referencing 8,264 well records from the VDEQ and the Virginia Department of Health to a digital model of the Virginia Coastal Plain hydrogeologic framework. This analysis highlights the regional importance of the Yorktown-Eastover, Potomac, and surficial aquifers. Collectively, these three aquifers account for 80 percent of self-supplied domestic groundwater withdrawals. The population using self-supplied domestic water was estimated using census blocks, well-use ratios, building footprints, and land-use and land-cover data to produce a high-resolution, disaggregated, raster-based dataset. This approach improves upon previous models at the census-block or road-network scale by reducing the low-density spread of the self-supplied domestic population across undeveloped areas and concentrating the population and its corresponding water use in the areas where it is most likely to occur. Results show that an estimated 475,332 people comprise the 2020 self-supplied domestic population of the Virginia Coastal Plain, an increase of 5.7 percent since 2010, and the greatest concentrations of self-supplied domestic population surround large cities. Estimates could be further refined with the addition of current and complete spatial data on public water-system service areas. The quantity of water used by the self-supplied domestic population was estimated by modifying published state per-capita water-use coefficients with the corresponding monthly variability assessed from Virginia Coastal Plain public water-system withdrawal data. This analysis estimates an average increase of 12 percent from June through August and an average decrease of 8 percent from December through March from the baseline annual average of 80 gallons per day per capita, which generally matches similar studies in the eastern United States. The application of these revised methodologies for the estimation of private-domestic wells and the self-supplied domestic population improves understanding of domestic groundwater use in the Virginia Coastal Plain across hydrogeologic, spatial, and temporal scales. These revisions help better inform water-resource managers and decision makers and support higher resolution groundwater modeling. Furthermore, these methods are transferrable to other areas where self-supplied domestic water withdrawals are important to the overall water budget.

Virginia↗

Definitions of database files and fields of the Personal Computer-Based Water Data Sources Directory

This report describes the data-base files and fields of the personal computer-based Water Data Sources Directory (WDSD). The personal computer-based WDSD was derived from the U.S. Geological Survey (USGS) mainframe computer version. The mainframe version of the WDSD is a hierarchical data-base design. The personal computer-based WDSD is a relational data- base design. This report describes the data-base files and fields of the relational data-base design in dBASE IV (the use of brand names in this abstract is for identification purposes only and does not constitute endorsement by the U.S. Geological Survey) for the personal computer. The WDSD contains information on (1) the type of organization, (2) the major orientation of water-data activities conducted by each organization, (3) the names, addresses, and telephone numbers of offices within each organization from which water data may be obtained, (4) the types of data held by each organization and the geographic locations within which these data have been collected, (5) alternative sources of an organization's data, (6) the designation of liaison personnel in matters related to water-data acquisition and indexing, (7) the volume of water data indexed for the organization, and (8) information about other types of data and services available from the organization that are pertinent to water-resources activities.

Open-File Report↗

Toward a social-ecological theory of forest macrosystems for improved ecosystem management

The implications of cumulative land-use decisions and shifting climate on forests, require us to integrate our understanding of ecosystems, markets, policy, and resource management into a social-ecological system. Humans play a central role in macrosystem dynamics, which complicates ecological theories that do not explicitly include human interactions. These dynamics also impact ecological services and related markets, which challenges economic theory. Here, we use two forest macroscale management initiatives to develop a theoretical understanding of how management interacts with ecological functions and services at these scales and how the multiple large-scale management goals work either in consort or conflict with other forest functions and services. We suggest that calling upon theories developed for organismal ecology, ecosystem ecology, and ecological economics adds to our understanding of social-ecological macrosystems. To initiate progress, we propose future research questions to add rigor to macrosystem-scale studies: (1) What are the ecosystem functions that operate at macroscales, their necessary structural components, and how do we observe them? (2) How do systems at one scale respond if altered at another scale? (3) How do we both effectively measure these components and interactions, and communicate that information in a meaningful manner for policy and management across different scales?

Forests↗

Developing an effective Agassiz's Desert Tortoise monitoring program: Final report to the Coachella Valley Conservation Commission

Agassiz’s desert tortoise (Gopherus agassizii) is a conservation-reliant species with populations north and west of the Colorado River protected as threatened under the Endangered Species Act (Averill-Murray et al. 2012). Since it was listed under this category in 1990, a great deal has been learned about the natural history of the species, and it is now one of the best-studied turtles in the United States (Lovich and Ennen 2013). However, the accumulated body of scientific data available for the species has not yet been translated into recovery or delisting of the species. Successful conservation of any species requires knowledge of their natural history and how vital rates affect their ability to maintain stable populations in the face of natural and anthropogenic stresses. Agassiz’s desert tortoises occur from southwestern Utah to near the Mexican border in California – a distance of over 450 km – but population densities vary greatly across this immense landscape (U.S. Fish and Wildlife Service 2015). Tortoises occur in the Sonoran Desert of California, including the eastern and western ends of the Coachella Valley, where it is one of 27 species covered under the Coachella Valley Multiple Species Habitat Conservation Plan and Natural Community Conservation Plan (CVMSHCP/NCCP). The southern portion of Joshua Tree National Park (JTNP) lies within this 1.1 million acre planning area, and was predicted to be an area of low-density tortoise populations using habitat suitability modeling (Barrows 2011). JTNP is near the southern distributional limit of G. agassizii, yet very little has been published regarding the ecology of tortoises in the Sonoran Desert of California. Reproductive output is an important gross measure of the ability of a population to persist. When integrated with data on fertility and survivorship, this information forms a foundation for assessing population status and formulating effective management strategies (e.g., Congdon et al. 1993, 1994), especially for imperiled species. One aspect of the biology of G. agassizii that has been particularly well-studied is reproductive output. However, most of what we know about this topic comes from research in the Mojave Desert portion of the species’ range (Ernst and Lovich 2009). Comparatively little has been published on the reproductive ecology of populations living in the Sonoran Desert ecosystem of California. Publications by Lovich et al. (1999, 2011, 2012, 2014, 2015) constitute the main body of literature on desert tortoise reproductive ecology in the Sonoran Desert of California, with one study population located at the western end of the CVMSHCP/NCCP area. Collecting data on Agassiz’s desert tortoise ecology in the Sonoran Desert ecosystem is important due to significant differences between the two adjacent desert ecosystems, especially the timing and amounts of annual precipitation, and their potential effects on reproductive output (e.g., Lovich et al. 5 2015). There are also differences in the vulnerability of tortoises to the effects of a warming, drying climate between the two deserts (Barrows 2011; Zylstra et al. 2012). The overall goal of this study was to collect data on demography, reproductive output, and genetic affinities at a study site in the Sonoran Desert portion of JTNP in the eastern end of the CVMSHCP/NCCP area. Specific objectives included: 1) Collect data to establish baselines on tortoise populations and/or their habitat suitability in core habitat within the CVNCCP area, including biotic and abiotic variables affecting persistence of tortoise populations; 2) Compare and contrast with data collected on desert tortoises at USGS/BLM study site near Palm Springs over 16 years; 3) Support long-term modeling efforts needed to determine tortoise population viability; 4) Refine modeled relationships with identified threats such as fire, invasive species and climate change; and 5) Prioritize adaptive management needs for the desert tortoise in and beyond the CVNCCP area. The data from this study will aid in determining baseline estimates of the desert tortoise population size within the planning area as well as establish a marked population of Agassiz’s desert tortoises for future monitoring. Data will be integrated with habitat modeling in order to refine model output. Genetic data will be collected on both the north and south sides of Interstate 10 to determine the potential effects of habitat fragmentation and genetic mixing. Analyses are ongoing and results beyond those presented in this report will be published in peer-reviewed scientific journals following inclusion of additional data collected on the south side of Shavers Valley in 2017-2018.

Report↗

Digital data for volcano hazards at Newberry Volcano, Oregon

Newberry volcano is a broad shield volcano located in central Oregon, the product of thousands of eruptions, beginning about 600,000 years ago. At least 25 vents on the flanks and summit have been active during the past 10,000 years. The most recent eruption 1,300 years ago produced the Big Obsidian Flow. Thus, the volcano's long history and recent activity indicate that Newberry will erupt in the future. Newberry Crater, a volcanic depression or caldera has been the focus of Newberry's volcanic activity for at least the past 10,000 years. Newberry National Volcanic Monument, which is managed by the U.S. Forest Service, includes the caldera and extends to the Deschutes River. Newberry volcano is quiet. Local earthquake activity (seismicity) has been trifling throughout historic time. Subterranean heat is still present, as indicated by hot springs in the caldera and high temperatures encountered during exploratory drilling for geothermal energy. The report USGS Open-File Report 97-513 (Sherrod and others, 1997) describes the kinds of hazardous geologic events that might occur in the future at Newberry volcano. A hazard-zonation map is included to show the areas that will most likely be affected by renewed eruptions. When Newberry volcano becomes restless, the eruptive scenarios described herein can inform planners, emergency response personnel, and citizens about the kinds and sizes of events to expect. The geographic information system (GIS) volcano hazard data layers used to produce the Newberry volcano hazard map in USGS Open-File Report 97-513 are included in this data set. Scientists at the USGS Cascades Volcano Observatory created a GIS data layer to depict zones subject to the effects of an explosive pyroclastic eruption (tephra fallout, pyroclastic flows, and ballistics), lava flows, volcanic gasses, and lahars/floods in Paulina Creek. A separate GIS data layer depicts drill holes on the flanks of Newberry Volcano that were used to estimate the probability of coverage by future lava flows.

Open-File Report↗

Long-Billed Curlew Breeding Success on Mid-Columbia River National Wildlife Refuges, South-Central Washington and North-Central Oregon, 2007-08

Long-billed curlew (Numenius americanus) reproductive success was evaluated on the Mid-Columbia River National Wildlife Refuges of south-central Washington and north-central Oregon during the 2007 and 2008 breeding seasons. Additionally, we assisted the U.S. Fish and Wildlife Service in collecting information on distribution, abundance, and brood habitat for this shorebird species of conservation concern. A total of 32 breeding pairs were located on the refuges in 2007 and 35 pairs were located in 2008. We monitored 17 nests in 2007 and 23 nests in 2008. Curlew pairs were most abundant on Hanford Reach National Monument in 2007 but more nests were located on Umatilla National Wildlife Refuge in both years, with Columbia National Wildlife Refuge supporting few pairs. Nest success was 23.6 percent in 2007 and 32.9 percent in 2008 after taking into account exposure time and combining data for all the refuges. We were unable to detect any relationship between nest success and habitat type or habitat variables measured. However, our study was the first to document use of agricultural fields on the refuge as curlew nest habitat. We collected 39 and 28 brood locations in 2007 and 2008, respectively, and many observations were likely resightings of the same brood. Broods used a similar variety of habitats as nesting curlew and no clear habitat use pattern was detected.

Open-File Report↗

Model description and evaluation of the mark-recapture survival model used to parameterize the 2012 status and threats analysis for the Florida manatee ( Trichechus manatus latirostris )

This report provides supporting details and evidence for the rationale, validity and efficacy of a new mark-recapture model, the Barker Robust Design, to estimate regional manatee survival rates used to parameterize several components of the 2012 version of the Manatee Core Biological Model (CBM) and Threats Analysis (TA). The CBM and TA provide scientific analyses on population viability of the Florida manatee subspecies ( Trichechus manatus latirostris ) for U.S. Fish and Wildlife Service’s 5-year reviews of the status of the species as listed under the Endangered Species Act. The model evaluation is presented in a standardized reporting framework, modified from the TRACE (TRAnsparent and Comprehensive model Evaluation) protocol first introduced for environmental threat analyses. We identify this new protocol as TRACE-MANATEE SURVIVAL and this model evaluation specifically as TRACE-MANATEE SURVIVAL, Barker RD version 1. The longer-term objectives of the manatee standard reporting format are to (1) communicate to resource managers consistent evaluation information over sequential modeling efforts; (2) build understanding and expertise on the structure and function of the models; (3) document changes in model structures and applications in response to evolving management objectives, new biological and ecological knowledge, and new statistical advances; and (4) provide greater transparency for management and research review.

Open-File Report↗

Lithology and fracture characterization from drilling investigations in the Mirror Lake area, Grafton County, New Hampshire

The lithology and fracture network of the bedrock aquifer in the Mirror Lake area were characterized from hydrogeologic data collected from 1979-95 in Grafton County, N.H. The collection of these data is an integral part of an ongoing multidisciplinary study by the U.S. Geological Survey to characterize groundwater flow and solute transport in fractured rock. The data provide a physical framework and enable the characterization of the fractures and the rock types in the bedrock aquifer in the Mirror Lake study area. In addition, these data provide a detailed description of the subsurface intersected by boreholes that can be used to compare the results of other borehole testing. The Mirror Lake area is characterized by steep bedrock uplands that are mostly covered by colluvium, discontinuous stratified-drift deposits, and glacial till that varies locally in thickness from less than 10 meters to as much as 50 meters. The land-surface altitude ranges from 180 meters near the Pemigewasset River to 720 meters on the mountain top on the northwestern side of the study area. The bedrock in the area is predominantly sillimanite-grade pelitic schists that have been complexly folded and intruded by granitoids, pegmatites, and diabase dikes. The bedrock has been fractured in response to local and tectonic stress. The resulting interconnected network of fractures forms the bedrock aquifer. This report describes the lithologic units in the study area and provides a characterization of the lithology and fractures found in 40 boreholes, which range in depth from 60 to 305 meters, that were drilled for this study. Drilling logs and color video surveys were used to locate and characterize the fractures and rock types in the subsurface. Solid bedrock core was obtained from three of the boreholes. Petrographic thin-section, x-ray diffraction and scanning electron microscope with energy dispersive x-ray fluorescence spectrometry analyses were done on selected samples from boreholes and outcrops. Observations recorded at the time of drilling, descriptions of rock samples collected from the boreholes, interpretation of rock type and fractures based on boreholeimaging surveys, descriptions of rock core and petrographic analyses of selected rock samples are in tables and figures. Analysis of the data provided information on the distribution of fractures and lithology in the boreholes at Mirror Lake. The relative abundances of the rock types were computed for three groups of boreholes, including (1) the Forest Service Experimental (FSE) well field, (2) the Camp Osceola (CO) well field, and (3) the index boreholes, which are 15 boreholes distributed areally throughout the study area including the deepest borehole from each of the two well fields. The index boreholes are separated by hundreds of meters and are typically 100 meters deep. The FSE well field includes 13 boreholes that are separated by 10 to 40 meters. These 13 boreholes are approximately 100 meters deep, except for one borehole that is 230 meters deep. The rocks penetrated by the FSE wells are predominantly igneous. Approximately 70 percent of the rocks encountered in the boreholes in the FSE well field were granite, pegmatite, and aplite. The CO well field includes 9 boreholes that range from 60-70 meters deep and one borehole that is 175 meters deep. The rocks encountered in these boreholes were predominantly metamorphic. The distribution of rock types in the CO well field is similar to the distribution of rocks in highway roadcuts, that are approximately 90 to 150 meters east of the well field. Seventy percent of the roadcut exposures are schist. Collectively, in the 15 index boreholes, the metamorphic and igneous rocks are equally distributed. Analysis of the rock types in these boreholes indicates that the rock types tend to "change" every 5 to 9 meters. Although the metamorphic and igneous rocks each comprise approximately 50 percent of the rock types observed in the 15 index boreholes, 73 percent of the fractures were in the igneous rocks. This indicates that the granitoids tend to be more fractured than the metamorphic rocks. Pegmatite, diabase, quartzite, and gneissic rocks are relatively unfractured. Boreholes completed in bedrock generally have one or two water-bearing zones, which were identified during the drilling process. At the completion of drilling a borehole, the driller estimated the yield of the borehole with an air-lift test. Yields estimated by drillers ranged from less than 3 to 378 liters per minute. These yields are typical of the yields measured for domestic wells in Grafton County. Water levels measured in the open boreholes after the boreholes recovered from the hydraulic stresses of drilling were usually in the steel casing and were within 10 meters of the land surface. Water levels in eight of the boreholes were above the top of casing or above land surface.

New Hampshire↗

Wildlife guilds in Arizona desert habitats

This report summarizes information produced from Interagency Agreement No. AA-851-IA1-27 between the Bureau of Land Management (BLM), USDI, and the Fish and Wildlife Service (FWS), USDI. The contract was instrumental in the final development of wildlife guilds for the Hualapai-Aquarius planning area of the BLM in westcentral Arizona, reported herein. The Arizona study area was selected for the application of the guilding technology because a thorough assessment of the floral and faunal resources had recently occurred in conjunction with the development of a grazing Environmental Impact Statement (EIS). Thus, the association of wildlife species with habitat type was well known, which aided in the compilation of the data base necessary for the development of guilds. Some data were also available that described the vegetative structure of habitats. This was useful in the development of a model that evaluated the quality of habitat on the basis of the diversity of cover in those habitats (Short 1982).

Arizona↗