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At least 991 records · Page 55Linked to original sources
USGS2006

Commissioned Review. Carbon: freshwater plants

δ13C values for freshwater aquatic plant matter varies from −11 to −50‰ and is not a clear indicator of photosynthetic pathway as in terrestrial plants. Several factors affect δ13C of aquatic plant matter. These include: (1) The δ13C signature of the source carbon has been observed to range from +1‰ for HCO3− derived from limestone to −30‰ for CO2 derived from respiration. (2) Some plants assimilate HCO3−, which is –7 to –11‰ less negative than CO2. (3) C3, C4, and CAM photosynthetic pathways are present in aquatic plants. (4) Diffusional resistances are orders of magnitude greater in the aquatic environment than in the aerial environment. The greater viscosity of water acts to reduce mixing of the carbon pool in the boundary layer with that of the bulk solution. In effect, many aquatic plants draw from a finite carbon pool, and as in terrestrial plants growing in a closed system, biochemical discrimination is reduced. In standing water, this factor results in most aquatic plants having a δ13C value similar to the source carbon. Using Farquhar's equation and other physiological data, it is possible to use δ13C values to evaluate various parameters affecting photosynthesis, such as limitations imposed by CO2 diffusion and carbon source.

Plant, Cell & Environment↗
USGS2015

Corrigendum to “Comparing activated alumina with indigenous laterite and bauxite as potential sorbents for removing fluoride from drinking water in Ghana” [Appl. Geochem. 56 (2015) 50–66]

The authors regret that the application of the t -plot to determine the presence of micropores in the three sorbents needs the following corrections: (1) Fig. 1a, c, e are N 2(g) adsorption and desorption isotherms” (remove “BET”). This correction applies to descriptions in the text as well. (2) Table 2, the column titled “Micropores” is mislabelled, and should be labelled “Film thickness”, which may not equal the pore width. The column titled “Micropore volume” is a correct description for laterite volume 0.0022 cm 3 g −1 ( t = 0.3–0.5 nm), but the other pore volumes listed cannot be identified as corresponding to micropores. They likely comprise both micropores and mesopores in laterite, while the presence of micropores in activated alumina is not clear. The positive y-intercept for the lowest linear portion of the laterite t -plot curve indicates micropores (Fig. 1f), and the shape of the t -plot curve suggests the presence of both micropores and mesopores. The shape of the activated alumina t -plot curve suggests the presence of micropores and mesopores, but the zero intercept for the lowest linear portion of the curve (Fig. 1b) creates uncertainty regarding the presence of micropores. Also see Storck et al., 1998; Hay et al. 2011 and references therein. (Additional note: analytical instrument Micromeritics ® was misspelled as “Micrometrics”). The authors would like to apologise for any inconvenience caused.

Applied Geochemistry↗
USGS1990

Trace elements in Corbicula fluminea from the San Joaquin River, California

(i) Trace element concentrations in soft tissue of the benthic bivalve, Corbicula fluminea, from the San Joaquin River and its major tributaries were examined during the primary irrigation season in relation to the spatial variation in concentrations of major, minor and trace constituents in riverwater and sediments. (ii) Selenium concentrations in Corbicula from perennial flow reaches of the San Joaquin River and its major tributaries varied directly with the solute (??? 0.45 ??m) Se concentrations of riverwater. Elevated concentrations occurred in clams from sites with substantial discharge originating as subsurface drainage and irrigation return flows. Both tissue and solute Se concentrations declined from June through the end of the primary irrigation season. (iii) Arsenic concentrations in Corbicula from perennial flow reaches of the San Joaquin River varied directly with the HNO3-extractable (pH 2) As:Fe ratio of suspended matter, providing evidence that sorption to oxyhydroxide surfaces is an important control on the biological availability of As. However, Corbicula from several tributaries draining alluvium derived from the Sierra Nevada had lower As concentrations than would be predicted by the relation developed for perennial flow sites of the San Joaquin River. Arsenic concentrations in Corbicula from the Tuolumne and Merced Rivers and upstream reaches of the San Joaquin River were higher than in clams from the downstream perennial flow reaches of the San Joaquin River. Concentrations of As in clams from downstream perennial flow reaches of the San Joaquin River increased from June through the end of the primary irrigation season. (iv) Mercury concentrations in Corbicula were elevated in upstream reaches of the San Joaquin River, in the Merced and Tuolumne Rivers, and in tributaries draining the Coast Ranges. Mean Cd and Cu concentrations in Corbicula were elevated in the Merced and Tuolumne Rivers, Orestimba Creek and a perennial flow reach of the San Joaquin River which receives water directly from the Delta Mendota Canal. Concentrations of Ni in clams from the San Joaquin River decreased downstream of the Delta Mendota Pool. (v) Boron and Mo were not accumulated by Corbicula despite high solute concentrations (means as high as 2960 ??g B l-1 and 9 ??g Mo l-1) in riverwater during the primary irrigation season. This bivalve may not be an appropriate bioindicator of B and Mo enrichment. Concentrations of Cr, Pb, Ag, V and Zn in Corbicula exhibited little geographic variability in the drainage. (vi) Regression analysis revealed no clear evidence of synergistic or antagonistic interactions among As, Cd, Cu, Hg, Ni and Se in their uptake by Corbicula.

Conference Paper↗
USGS2011

Globorotalia truncatulinoides (dextral) Mg/Ca as a proxy for Gulf of Mexico winter mixed-layer temperature: evidence from a sediment trap in the northern Gulf of Mexico

Three years of weekly- to biweekly-resolved sediment-trap data show that almost 90% of the total flux of tests of the planktic foraminifer Globorotalia truncatulinoides to sediments in the northern Gulf of Mexico occurs in January and February. Comparison of δ 18 O from tests of non-encrusted Gl. truncatulinoides in sediment-trap samples with calculated calcification depths indicates that the non-encrusted individuals secrete their test in the winter surface-mixed layer, most likely at the bottom of the surface mixed zone. Mg/Ca-temperature estimates from non-encrusted Gl. truncatulinoides in sediment-trap samples are consistent with observed temperatures at the calcification depths inferred from the δ 18 O data. In contrast, Mg/Ca-temperature estimates from encrusted Gl. truncatulinoides in sediment-trap samples indicate the crust is formed in cooler (deeper) waters. A preliminary study in a core recovered near the sediment-trap site demonstrates that non-encrusted and encrusted forms of Gl. truncatulinoides in sediment samples show a similar offset in Mg/Ca values as observed in sediment-trap samples. A short (~ 100 years) Mg/Ca record from non-encrusted Gl. truncatulinoides indicates a warming trend that coincides with a warming trend in mean-annual sea-surface temperature recorded by Mg/Ca in Globigerinoides ruber (white) from the same core. These findings suggest Mg/Ca from non-encrusted Gl. truncatulinoides has clear potential as a proxy for past winter mixed-layer temperature.

Marine Micropaleontology↗
USGS2016

Ecological requirements for pallid sturgeon reproduction and recruitment in the Missouri River—A synthesis of science, 2005 to 2012

This report is intended to synthesize the state of the scientific understanding of pallid sturgeon ecological requirements to provide recommendations for future science directions and context for Missouri River restoration and management decisions. Recruitment of pallid sturgeon has been low to non-existent throughout its range. Emerging understanding of the genetic structure of pallid sturgeon populations sets a broad framework for species and river management decisions, including decisions about managing the future genetic diversity of the species, but also decisions about where and what type of river restoration actions will be effective for subpopulations of this highly migratory species. Adult pallid sturgeon may migrate hundreds of kilometers (km) to spawn and their progeny may disperse even greater distances downstream as drifting free embryos. As a result of their complex life history pallid sturgeon naturally exploit a wide range of habitats during their life cycles. The construction of dams and reservoirs has fragmented habitats and may have shifted Missouri River subpopulations downstream. Research has not identified one primary biological or ecological constraint that appears to limit populations of the pallid sturgeon. With the present (2013) state of knowledge many life stages and life-stage transitions cannot be ruled out as contributing to recruitment failure. Biological opinions in 2000 (and amended in 2003) presented the dominant hypotheses for recruitment failure that existed at that time. Emphasis was on the role of the flow regime, specifically spring flow pulses (“spring rises”), to condition spawning substrate and cue reproductive aggregations and migrations, and on low flows and additional slow, shallow-water area to serve as rearing habitat for age-0 to juvenile pallid sturgeon. Studies on spawning habitat dynamics have documented that habitat patches selected for spawning by fish in the Lower Missouri River (Missouri River downstream from Gavins Point Dam to the confluence with the Mississippi River) are dominantly on outside, revetted bends in the deepest, fastest, and most turbulent water. Studies in more natural habitat on the Yellowstone River have documented spawning in convergent flow in the middle of the channel on discrete patches of gravel within a sand-dominated channel, an arrangement that may be more effective in attracting aggregations of reproductive fish compared to the nearly continuous revetment on the Lower Missouri River. Pallid sturgeon spawn in the spring and early summer during periods of increasing day length. Water temperature consistently exerts a threshold effect for spawning at 16–18 °C. In addition, the role of water temperature is indicated by pauses and reversals in upstream migrations that have been associated with cold weather fronts that create a transient decrease in water temperature. From 2005 to 2012 on the Lower Missouri River, no obvious relations between flow pulses and fish movements and spawning behaviors have been apparent. However, pallid sturgeon tracking at the Upper Missouri–Yellowstone confluence indicates that in most years, most telemetered pallid sturgeon migrate out of the Missouri River and into the Yellowstone River in the June–July timeframe in association with the spring pulse. This pattern was disrupted in 2011 when a high flow pulse with warm temperatures and high turbidity emanated from the Milk River, followed by record releases from Fort Peck Dam, and 36–39 percent of the telemetered population migrated up the Upper Missouri. This result supports the hypothesis that sufficiently large flow pulses may trigger migration and aggregation but it is not clear that functional pulses are within reservoir management authorities. Notably, a pallid sturgeon free embryo was captured on the Upper Missouri River in 2011 and another single, genetically confirmed embryo was captured on the Yellowstone River in 2012. Research on free-embryo drift has indicated the potential for hundreds of miles of downstream dispersal. Lack of distance to accommodate the extended downstream dispersal period of free embryos on the Upper Missouri and Yellowstone Rivers is the predominant hypothesis for recruitment failure in the upper basin. Long drift distances in the Lower Missouri River may be responsible for shifting Lower Missouri River sub-populations further into the Middle Mississippi River. Physical understanding of drift processes indicates that mean velocities could be slowed through decreased discharges or increased channel hydraulic radius (width and topographic diversity) to reduce free-embryo dispersal distances. In addition, the probability that free embryos are transported into and retained in channel-margin habitats is theoretically amenable to channel re-engineering that would increase cross-channel secondary currents in bends or channel expansions. Considerable uncertainty persists, however, about whether extended drift of Lower Missouri River larvae is responsible for recruitment failure. If drift distance is limiting, it is important to discern whether it would be advisable to retain larvae within the Missouri River, and where along the river restoration projects should be placed to optimize survival and growth of age-0 and juvenile sturgeon. Longitudinal differences in female pallid sturgeon fecundity lend support to the hypothesis that recruitment failure may be due, in part, to fish having insufficient nutrition to produce the numbers of gametes needed for the population to grow, perhaps because of simultaneous declines in prey-fish populations and their habitats. Establishing a chain of causality from habitat decline, to prey-fish populations, to sturgeon diets, to sturgeon fecundity, and to pallid sturgeon population growth presents a considerable scientific challenge. In addition to the dominant hypotheses relating pallid sturgeon populations to changes in flow regime and channel morphology, other factors have been identified that might be sources of stress and contribute to recruitment failure. Among these are water quality and contaminants. Ambient water-quality monitoring on the Missouri River has demonstrated summer episodes when dissolved oxygen dips below 5 milligrams per liter, a threshold that may be stressful especially to age-0 and juvenile sturgeon. Documented cases of intersex in shovelnose and pallid sturgeon indicate that agricultural and municipal sources of endocrine disrupting chemicals also may have a role in pallid sturgeon recruitment failure. Scientific understanding of the ecological requirements of pallid sturgeon has increased almost exponentially in the last two decades, and efforts are now turning from understanding fundamental biology of the species to quantifying how population dynamics relate to potential management actions. Progress in developing the science needed to inform management actions on the Missouri River may benefit from continuation of monitoring of reproductive cycles, reproductive movements, growth, and survival of telemetry tagged adults, increased emphasis on focused, complementary field and laboratory studies of factors influencing early life history, implementation of studies to resolve the role of food limitations in growth, survival, and reproductive condition, and implementation of studies designed specifically to parameterize models linking management to populations.

Missouri River↗
USGS2015

Influence of a chlor-alkali superfund site on mercury bioaccumulation in periphyton and low-trophic level fauna

In Berlin, New Hampshire, USA, the Androscoggin River flows adjacent to a former chlor-alkali facility that is a US Environmental Protection Agency Superfund site and source of mercury (Hg) to the river. The present study was conducted to determine the fate and bioaccumulation of methylmercury (MeHg) to lower trophic-level taxa in the river. Surface sediment directly adjacent to the source showed significantly elevated MeHg (10–40× increase, mean ± standard deviation [SD]: 20.1 ± 24.8 ng g –1 dry wt) and total mercury (THg; 10–30× increase, mean ± SD: 2045 ± 2669 ng g –1 dry wt) compared with all other reaches, with sediment THg and MeHg from downstream reaches elevated (3–7× on average) relative to the reference (THg mean ± SD: 33.5 ± 9.33 ng g –1 dry wt; MeHg mean ± SD: 0.52 ± 0.21 ng g –1 dry wt). Water column THg concentrations adjacent to the point source for both particulate (0.23 ng L –1 ) and dissolved (0.76 ng L –1 ) fractions were 5-fold higher than at the reference sites, and 2-fold to 5-fold higher than downstream. Methylmercury production potential of periphyton material was highest (2–9 ng g –1 d –1 dry wt) adjacent to the Superfund site; other reaches were close to or below reporting limits (0. 1 ng g –1 d –1 dry wt). Total Hg and MeHg bioaccumulation in fauna was variable across sites and taxa, with no clear spatial patterns downstream of the contamination source. Crayfish, mayflies, and shiners showed a weak positive relationship with porewater MeHg concentration.

New Hampshire↗
USGS2020

Evaluating dewatering approaches to protect larval Pacific lamprey

Executive Summary Larval Pacific lamprey live for several years burrowed in nearshore sediments where they filter feed on detritus and organic matter. Dewatering of larval habitat can occur as a result of flow-management practices, construction projects, or seasonal closures of irrigation diversions. Effective management of dewatering events requires guidance on approaches to protect lamprey, such as dewatering rates and light conditions (day or night) that allow lamprey the best opportunity to relocate water and avoid being stranded. We conducted controlled laboratory experiments comparing five dewatering rates (1, 1.8, 4, 8, and 16 inches per hour [in/h]) and two light conditions (light and dark) to evaluate their effectiveness in protecting larval lamprey. We used a tank with a simulated shoreline at a 10-percent slope filled with river sediment and manipulated the outflow to control the rate of dewatering until water was covering only the sediment in the lowest tank section, at the bottom of the slope. Following dewatering, larvae were classified as either stranded (in or on the substrate outside the watered area) or safe (relocated to the wetted area at the lower end of the tank). All study groups experienced high rates of stranding. The lowest stranding rates were for 1 in/h, in both light (77 percent) and dark (80 percent). Faster dewatering rates generally produced higher percentages of stranded fish, and both the dark and light trials at 16 in/h stranded all larvae. At each of the five dewatering rates, trials conducted in the dark stranded the same or higher proportions of fish than the corresponding trial conducted in the light, so there was no clear advantage to dewatering during dark conditions. The largest contribution to stranding rates for all study groups was the high number of larvae (50–80 percent) that did not initiate movement in response to dewatering and remained in the uppermost tank section where they were stocked at the start of the trials. The proportion of larvae that emerged from the sediment during dewatering trials was approximately 30 percent, and fish that emerged were consistently smaller than those that remained burrowed. Combining all dewatering rates, emergence was 31.3 percent for groups under dark conditions and 30.7 percent for groups under light conditions. We recorded the timing of emergence for 58 larvae and their median time to emerge (after the surface of the sediment in the uppermost tank section was dewatered) was 0.62 hour (h) (range 0–4.5 h). We measured larval movement rates and found that large fish moved faster than small fish. Differences in larval movement rate based on light condition were significant only for large fish, which had a significantly faster rate during light conditions. Larval lamprey moved, over short distances, at rates that exceeded the fastest dewatering rate we tested. The mean movement rates for groups ranged from 19.0 to 44.4 centimeters per minute [cm/min]) and the fastest dewatering rate (16 in/h) is equivalent to less than 1 cm/min. Only the slowest movement rate measured, 6.6 cm/min for one individual lamprey, was slower than the fastest dewatering rate. We also investigated lamprey responses to a series of dewatering and rewatering events. Individual larvae were held in cylinders and exposed to four cycles of dewatering and rewatering using dewatering rates of 1 and 16 in/h and a rewatering rate of 2 in/h. Each dewatering rate was tested under both dark and light conditions. The location of fish, either on the surface of the sediment or burrowed, was recorded after each dewatering event for four rounds. The most common individual fish response for all study groups was to remain burrowed through all four rounds, and there were large differences in response between small and large larvae. Overall for small larvae, combining all groups, 14 of 28 fish emerged, and of those, 8 died and 1 was lethargic. The 1-in/h rate had 7 of the 8 mortalities, split about equally between the dark (3 fish) and light (4 fish) trials. All but one fish that died emerged from the sediment at some point during the four rounds of dewatering. Large larvae predominantly remained burrowed in all four rounds and did not experience any mortality. None of the large fish emerged for more than a single round, and emergence occurred only in the first and second rounds. Larvae emerged more quickly as the number of dewatering events increased. The mean time to emerge after the surface of the sediment in the tube was dewatered, combing all four groups, was 42 minutes (min) in round 1 (14 fish), 16 min in round 2 (5 fish), 11 min in round 3 (3 fish), and 8 minutes in round 4 (3 fish). When all groups and rounds of dewatering were combined, the overall mean time to emerge was 29 min (25 fish) and ranged from 1 min to 2 hours after the surface of the sediment was dewatered. Larvae burrowed deeper during the 1-in/h trials than the 16-in/h trials, and few fish were deeper than about 23 centimeters (cm). Large larvae burrowed deeper than small larvae. Small larvae were most concentrated from 0 to 7.6 cm (83.7 percent), and large fish were concentrated from 15.2 to 22.8 cm (43.3 percent). The second dewatering event resulted in greater mean burrowing depth than the first event, but trends after the second event were less clear. Larval size played a role in lamprey responses to dewatering, having a significant effect on emergence, movement rate, and vertical distribution. The sediment used for laboratory testing or occupied by lamprey in the field appears to affect lamprey response to dewatering and deserves greater attention in future studies. Larvae were more active in the dark, but darkness did not consistently provide better outcomes (e.g., more emergence or reduced stranding) compared to daylight. An improved understanding of the cues that prompt larvae to emerge from the sediment, combined with the ability to manage dewatering rates, would be useful to guide future dewatering events to minimize negative effects to lamprey.

Open-File Report↗
USGS2003

Topography and Sedimentation Characteristics of the Squaw Creek National Wildlife Refuge, Holt County, Missouri, 1937-2002

The Squaw Creek National Wildlife Refuge (hereafter referred to as the Refuge), located on the Missouri River floodplain in northwest Missouri, was established in 1935 to provide habitat for migratory birds and wildlife. Results of 1937 and 1964 topographic surveys indicate that sedimenta-tion, primarily from Squaw Creek and Davis Creek inflows, had substantially reduced Refuge pool volumes and depths. A study was undertaken by the U.S. Geological Survey, in cooperation with the U.S. Fish and Wildlife Service, to quantify and spatially analyze historic rates of sedimentation in the Refuge and determine the surface elevations, depths, and pool capacities for selected managed pools from a 2002 survey.The 1937 to 1964 mean total sediment depo-sition, in the area corresponding to the 2002 sur-veyed pool area (about 4,900 acres), was 1.26 ft (feet), or 0.047 ft/yr (foot per year). Mean annual rates of deposition, by pool, from 1937 to 1964 varied from 0.016 to 0.083 ft/yr. From 1964 to 2002, the mean total sediment deposition in the 2002 surveyed pools was 0.753 ft, or 0.020 ft/yr. Therefore, the mean rate of sediment-depth accu-mulation from 1964 to 2002 was about 42 percent of the mean 1937 to 1964 rate, or a 58 percent reduction. Mean annual rates of deposition by pool from 1964 to 2002 varied from 0.010 to 0.049 ft/yr. Despite a substantial reduction in the average sediment accumulation rate for the Refuge, 5 of the 15 separate pools for which annual rates were calculated for both periods showed a small increase in the deposition rates of up to 0.008 ft/yr. Sediment deposits have resulted in a sub-stantial cumulative loss of volume in the Refuge pools since 1937. The 1937 to 2002 total sediment volume deposited in the 2002 surveyed pool area was about 9,900 acre-ft (acre-feet), or 152 acre-ft/yr (acre-feet per year). The volume of sediment deposited from 1937 to 1964 for these pools was about 6,200 acre-ft, or 230 acre-ft/yr. The volume deposited from 1964 to 2002 was about 3,700 acre-ft, or 97.3 acre-ft/yr.Bulk density values were determined from sediment cores collected from 22 sites in the Ref-uge and the bulk densities, along with sediment volumes, allowed for the calculation of sediment mass contributions to the Refuge. From 1937 to 2002, about 10,300,000 tons of sediment were deposited in the 2002 surveyed area, or 32.4 tons/acre/yr (tons per acre per year). The total computed mass of sediment deposited between 1937 and 1964 was about 6,510,000 tons, or an average of 49.1 tons/acre/yr. The total mass depos-ited from 1964 to 2002 in surveyed pools was about 3,830,000 tons, or an average of 20.5 tons/acre/yr. As with sediment thickness compari-sons, the rate of sediment mass deposition between 1964 to 2002 was about 42 percent of that from 1937 to 1964, or a 58 percent reduction.The greatest amounts of sediment deposition in the Refuge for 1937 to 2002 have been near the Squaw Creek and Davis Creek inflow spillway locations. Sediment depths in some areas near former inflow locations have exceeded 8 ft. Relo-cation of an inflow spillway effectively reduced additional sediment deposition at the original loca-tion, and caused increased sedimentation at the new inflow location. This is most clearly depicted in a pool located in the north section of the Refuge that directly received Squaw Creek inflows from 1937 to 1964 and had a mean deposition rate of 0.081 ft/yr reduced to 0.012 ft/yr, from 1964 to 2002, after inflows were redirected and erosion-management plans were implemented in the con-tributing basins.

Water-Resources Investigations Report↗
USGS2009

Hydrochemical analysis of groundwater using multivariate statistical methods - The Volta region, Ghana

Q and R-mode multivariate statistical analyses were applied to groundwater chemical data from boreholes and wells in the northern section of the Volta region Ghana. The objective was to determine the processes that affect the hydrochemistry and the variation of these processes in space among the three main geological terrains: the Buem formation, Voltaian System and the Togo series that underlie the area. The analyses revealed three zones in the groundwater flow system: recharge, intermediate and discharge regions. All three zones are clearly different with respect to all the major chemical parameters, with concentrations increasing from the perceived recharge areas through the intermediate regions to the discharge areas. R-mode HCA and factor analysis (using varimax rotation and Kaiser Criterion) were then applied to determine the significant sources of variation in the hydrochemistry. This study finds that groundwater hydrochemistry in the area is controlled by the weathering of silicate and carbonate minerals, as well as the chemistry of infiltrating precipitation. This study finds that the ??D and ?? 18 O data from the area fall along the Global Meteoric Water Line (GMWL). An equation of regression derived for the relationship between ??D and ?? 18 O bears very close semblance to the equation which describes the GMWL. On the basis of this, groundwater in the study area is probably meteoric and fresh. The apparently low salinities and sodicities of the groundwater seem to support this interpretation. The suitability of groundwater for domestic and irrigation purposes is related to its source, which determines its constitution. A plot of the sodium adsorption ratio (SAR) and salinity (EC) data on a semilog axis, suggests that groundwater serves good irrigation quality in the area. Sixty percent (60%), 20% and 20% of the 67 data points used in this study fall within the medium salinity - low sodicity (C2-S1), low salinity -low sodicity (C1-S1) and high salinity - low sodicity (C3-S1) fields, which ascribe good irrigation quality to groundwater from this area. Salinities range from 28.1 to 1956 ??S/cm, whilst SAR values fall within the range 0-3. Extremely low sodicity waters of this kind, with salinities lower than 600 ??S/cm, have the tendency to affect the dispersive properties of irrigation soils when used for irrigation. About 50% of the groundwater in the study area fall within this category and need prior treatment before usage. ?? 2009 Korean Society of Civil Engineers and Springer-Verlag Berlin Heidelberg GmbH.

KSCE Journal of Civil Engineering↗
USGS2016

Organic petrology and geochemistry of Eocene Suzak bituminous marl, north-central Afghanistan: Depositional environment and source rock potential

Organic geochemistry and petrology of Eocene Suzak bituminous marl outcrop samples from Madr village in north-central Afghanistan were characterized via an integrated analytical approach to evaluate depositional environment and source rock potential. Multiple proxies suggest the organic-rich (TOC ∼6 wt.%) bituminous marls are ‘immature’ for oil generation (e.g., vitrinite R o < 0.4%, T max < 425 °C, PI ≤ 0.05, C 29 ααα S/S + R ≤ 0.12, C 29 ββS/ββS+ααR ≤ 0.10, others), yet oil seeps are present at outcrop and live oil and abundant solid bitumen were observed via optical microscopy. Whole rock sulfur content is ∼2.3 wt.% whereas sulfur content is ∼5.0–5.6 wt.% in whole rock extracts with high polar components, consistent with extraction from S-rich Type IIs organic matter which could generate hydrocarbons at low thermal maturity. Low Fe-sulfide mineral abundance and comparison of Pr/Ph ratios between saturate and whole extracts suggest limited Fe concentration resulted in sulfurization of organic matter during early diagenesis. From these observations, we infer that a Type IIs kerogen in ‘immature’ bituminous marl at Madr could be generating high sulfur viscous oil which is seeping from outcrop. However, oil-seep samples were not collected for correlation studies. Aluminum-normalized trace element concentrations indicate enrichment of redox sensitive trace elements Mo, U and V and suggest anoxic-euxinic conditions during sediment deposition. The bulk of organic matter observed via optical microscopy is strongly fluorescent amorphous bituminite grading to lamalginite, possibly representing microbial mat facies. Short chain n- alkanes peak at C 14 –C 16 ( n- C 17 / n- C 29 > 1) indicating organic input from marine algae and/or bacterial biomass, and sterane/hopane ratios are low (0.12–0.14). Monoaromatic steroids are dominated by C 28 clearly indicating a marine setting. High gammacerane index values (∼0.9) are consistent with anoxia stratification and may indicate intermittent saline-hypersaline conditions. Stable C isotope ratios also suggest a marine depositional scenario for the Suzak samples, consistent with the presence of marine foraminifera including abundant planktic globigerinida (?) and rare benthic discocyclina (?) and nummulites (?). Biomarker 2α-methylhopane for photosynthetic cyanobacteria implies shallow photic zone deposition of Madr marls and 3β-methylhopane indicates presence of methanotrophic archaea in the microbial consortium. The data presented herein are consistent with deposition of Suzak bituminous marls in shallow stratified waters of a restricted marine basin associated with the southeastern incipient or proto-Paratethys. Geochemical proxies from Suzak rock extracts (S content, high polar content, C isotopes, normal (αααR) C 27–29 steranes, and C 29 /C 30 and C 26 /C 25 hopane ratios) are similar to extant data from Paleogene oils produced to the north in the Afghan-Tajik Basin. This observation may indicate laterally equivalent strata are effective source rocks as suggested by previous workers; however, further work is needed to strengthen oil-source correlations.

Marine and Petroleum Geology↗
USGS2010

Short-Term Effects of the 2008 High-Flow Experiment on Macroinvertebrates in Colorado River Below Glen Canyon Dam, Arizona

Glen Canyon Dam has dramatically altered the physical environment (especially discharge regime, water temperatures, and sediment inputs) of the Colorado River. High-flow experiments (HFE) that mimic one aspect of the natural hydrograph (floods) were implemented in 1996, 2004, and 2008. The primary goal of these experiments was to increase the size and total area of sandbar habitats that provide both camping sites for recreational users and create backwaters (areas of stagnant flow in the lee of return-current eddies) that may be important as rearing habitat for native fish. Experimental flows might also positively or negatively alter the rainbow trout (Oncorhynchus mykiss) sport fishery in the clear tailwater reach below Glen Canyon Dam, Ariz., and native fish populations in downstream reaches (for example, endangered humpback chub, Gila cypha) through changes in available food resources. We examined the short-term response of benthic macroinvertebrates to the March 2008 HFE at three sites [river mile 0 (RM 0, 15.7 miles downriver from the dam), RM 62, and RM 225] along the Colorado River downstream from Glen Canyon Dam by sampling immediately before and then 1, 7, 14, and 30 days after the HFE. We selected these sites because of their importance to management; RM 0 has a valuable trout fishery, and RM 62 is the location of the largest population of the endangered humpback chub in the Grand Canyon. In addition to the short-term collection of samples, as part of parallel investigations, we collected 3 years of monthly (quarterly for RM 62) benthic macroinvertebrate samples that included 15 months of post-HFE data for all three sites, but processing of the samples is only complete for one site (RM 0). At RM 0, the HFE caused an immediate 1.75 g AFDM/m2 (expressed as grams ash-free dry mass, or AFDM) reduction of macroinvertebrate biomass that was driven by significant reductions in the biomass of the two dominant taxa in this reach-Potamopyrgus antipodarum (New Zealand mud snails) and Gammarus lacustris (scuds or side-swimmers)-and also biomass reductions of other common taxa (worms in the families Lumbricidae and Tubificidae). Invertebrate drift estimates during the HFE suggest that reductions in biomass of some taxa were because of export from the reach. Reductions in biomass of P. antipodarum and G. lacustris persisted at least 15 months after the HFE, when this study concluded, and coincided with a significant decline in the annual production of these taxa: P. antipodarum production of 11 to 13 g AFDM/m2/yr in two pre-HFE years versus 2 g AFDM/m2/yr in the post-HFE year, and G. lacustris production of 7 to 8 g AFDM/m2/yr in two pre-HFE years versus 3 g AFDM/m2/yr in the post-HFE year. There were not changes in invertebrate feeding habits in response to the HFE, as our 3-year dataset of invertebrate diets indicated no substantial changes. Our long-term analysis of the composition of the drift indicates that because of a reduction in P. antipodarum in the drift relative to digestible taxa, the quality of the drift as a food resource for fishes increased. At downstream sites, total assemblage biomass did not decline, likely because assemblages were dominated by blackflies (Simulium arcticum), which were not affected by the HFE. Similar to RM 0, G. lacustris and Tubificidae had significantly lower biomass after the HFE at RM 62 and RM 225. Chironomids were also significantly lower following the flood at both downstream sites. Our findings demonstrate that the effects of a HFE on invertebrates may persist up to at least 15 months in the clear tailwater below the dam, whereas in downstream reaches impacts were more short lived. If controlling the abundance of P. antipodarum is a goal of managers, our findings indicate that periodic HFEs on the order of every 2 to 3 years may be an effective strategy for meeting that goal. More frequent HFEs may cause a shift in the state of the benthic invertebrate assemblage of the tailwa

Open-File Report↗
USGS1961

Jadeite deposits of the clear creek area, New Idria district, San Benito county, California

Tectonic inclusions within the New Idria serpentine body contain jadeite in two distinct assemblages: (1) Lenslike inclusions containing a monomineralic green jadeite core surrounded by a calc-silicate rim. (2) Jadeite veins cross-cutting albite-crossite schist inclusions. In these veins jadeite coexists with low albite; green jadeite (Jd 75 Ac+Di+He 25) coexists with low albite within the host schist. Albite schists are related to the pre-metamorphic keratophyres and it can be shown that desilication of such rocks produces a bulk composition similar to that of jadeite. Metamor-phism of keratophyric tectonic inclusions within serpentine produced jadeite-albite schists along margins of the inclusions. Jadeite-albite veins formed from mobilized liquids rich in the jadeite molecule and deficient in water. Geological evidence such as would indicate extreme pressures or temperatures during jadeite formation is lacking; rather, a low silica and dry system allowed its formation at reduced temperatures and pressures.

California↗
USGS2003

Morphometric and histopathological parameters of gonadal development in adult common carp from contaminated and reference sites in Lake Mead, Nevada

This study examined the hypothesis that exposure to sublethal concentrations of contaminants alters the gonadal condition of feral common carp Cyprinus carpio . Adult common carp in Lake Mead, Nevada, were collected from a contaminated site (Las Vegas Bay) that receives municipal and industrial effluent and from a reference site (Overton Arm) with a relatively low level of contamination. Fish were sampled seven times over a 1-year period extending over two separate spawning seasons. Morphometric and histopathological parameters of gonadal and germ cell development were determined. In males, the pattern of seasonal changes in the gonadosomatic index (GSI) was similar between the sites and showed no clear association with site-specific seasonal temperature profiles. However, Las Vegas Bay males had consistently lower GSI values and, on one of the sampling dates, a lower proportion of sperm relative to other germ cell stages (determined histologically). Further, Las Vegas Bay males had a higher incidence of gonadal macrophage aggregates, which are putative tissue biomarkers of contaminant exposure in fishes. In females, seasonal GSI profiles, the frequency of fish with postovulatory follicles (an index of spawning activity), and the timing of new follicle recruitment all showed differences between sites, but these differences generally matched differences in water temperature profile. Also, the peak size-frequency of full-grown follicles did not differ between sites, and estimates of fecundity for the second spawning season indicated that females from the reference site unexpectedly produced a lower number of gametes. Overall, site differences in gonadal condition were observed in carp of both sexes but they seemed to be associated with site differences in contaminant levels only in males. The apparent lack of association between contaminant level and gonadal condition in female carp from mildly mesotrophic Lake Mead may indicate a lack of contaminant effects in females or a confounding effect of the higher nutrient loads in the Las Vegas Bay environment.

Nevada↗
USGS2014

Are large-scale flow experiments informing the science and management of freshwater ecosystems?

Greater scientific knowledge, changing societal values, and legislative mandates have emphasized the importance of implementing large-scale flow experiments (FEs) downstream of dams. We provide the first global assessment of FEs to evaluate their success in advancing science and informing management decisions. Systematic review of 113 FEs across 20 countries revealed that clear articulation of experimental objectives, while not universally practiced, was crucial for achieving management outcomes and changing dam-operating policies. Furthermore, changes to dam operations were three times less likely when FEs were conducted primarily for scientific purposes. Despite the recognized importance of riverine flow regimes, four-fifths of FEs involved only discrete flow events. Over three-quarters of FEs documented both abiotic and biotic outcomes, but only one-third examined multiple taxonomic responses, thus limiting how FE results can inform holistic dam management. Future FEs will present new opportunities to advance scientifically credible water policies.

Frontiers in Ecology and the Environment↗
USGS1982

Post-depositional alteration of titanomagnetite in a Miocene sandstone, south Texas (U.S.A.)

Petrographic and geochemical studies have yielded information on the time-space relationships of the post-depositional alteration of detrital titanomagnetite (Ti-mt) in fine- to medium-grained sandstone from unoriented core samples (taken below the water table at depths of 30–45 m) of the Miocene Catahoula Sandstone, south Texas. Aqueous sulfide introduced from sour gas reservoirs along a growth fault into part of the Catahoula shortly after deposition resulted in the replacement at the periphery of Ti-mt grains by iron disulfide (FeS 2 ) minerals. Remnants of Ti-mt in cores of the partly sulfidized grains show no evidence of earlier hematitic oxidation. After sulfidization, part of the sandstone body was invaded by oxygenated groundwaters flowing down a shallowly inclined (1°) hydrologic gradient. The boundary between oxidized and reduced facies is clearly defined by the distribution of ferric and ferrous iron minerals, and the concentrations of Mo, U, and Se. In oxidized (light-red) strata that had not been previously subjected to sulfidic-reducing conditions but that are correlative with strata containing FeS 2 minerals, Ti-mt has been partly to entirely replaced pseudomorphously by hematite to form martite. The absence of hematitic alteration of Ti-mt in the reduced facies is strong evidence that martite in the oxidized facies formed after deposition.

Texas↗
USGS2023

A complex record of last interglacial sea-level history and paleozoogeography, Santa Rosa Island, Channel Islands National Park, California, USA

Studies of marine terraces and their fossils can yield important information about sea level history, tectonic uplift rates, and paleozoogeography, but some aspects of terrace history, particularly with regard to their fossil record, are not clearly understood. Marine terraces are well preserved on Santa Rosa Island, California, and the island is situated near a major marine faunal boundary. Two prominent low-elevation terraces record the ∼80 ka (marine isotope stage [MIS] 5a) and ∼120 ka (MIS 5e) high-sea stands, based on U-series dating of fossil corals and aminostratigraphic correlation to dated localities elsewhere in California and Baja California. Low uplift rates are implied by an interpretation of these ages, along with their elevations. The fossil assemblage from the ∼120 ka (2nd) terrace contains a number of northern, cool-water species, along with several southern, warm-water species, a classic example of what has been called a thermally anomalous fauna. Low uplift rates in the late Pleistocene, combined with glacial isostatic adjustment (GIA) processes, could have resulted in reoccupation of the ∼120 ka (MIS 5e), 2nd terrace during the ∼100 ka (MIS 5c) high-sea stand, explaining the mix of warm-water (∼120 ka?) and cool-water (∼100 ka?) fossils in the terrace deposits. In addition, however, sea surface temperature (SST) variability during MIS 5e may have been a contributing factor, given that Santa Rosa Island is bathed at times by the cold California Current with its upwelling and at other times is subject to El Niño warm waters, evident in the Holocene SST record. Study of an older, high-elevation marine terrace on the western part of Santa Rosa Island shows more obvious evidence of fossil mixing. Strontium isotope ages span a large range, from ∼2.3 Ma to ∼0.91 Ma. These analyses indicate an age range of ∼500 ka at one locality and ∼ 600 ka at another locality, interpreted to be due to terrace reoccupation and fossil reworking. Consideration of elevations and ages here also yield low, long-term uplift rates, which in part explains the potential for terrace reoccupation in the early Pleistocene. In addition, however, early Pleistocene glacial-interglacial cycles were of much shorter duration, linked to the ∼41 ka obliquity cycle of orbital forcing, a factor that would also enhance terrace reoccupation in regions of low uplift rate. It is likely that other Pacific Coast marine terrace localities of early Pleistocene age, in areas with low uplift rates, also have evidence of fossil mixing from these processes, an hypothesis that can be tested in future studies.

California↗
USGS2001

Sea-level and environmental changes since the last interglacial in the Gulf of Carpentaria, Australia: an overview

The Gulf of Carpentaria is an epicontinental sea (maximum depth 70 m) between Australia and New Guinea, bordered to the east by Torres Strait (currently 12 m deep) and to the west by the Arafura Sill (53 m below present sea level). Throughout the Quaternary, during times of low sea-level, the Gulf was separated from the open waters of the Indian and Pacific Oceans, forming Lake Carpentaria, an isolation basin, perched above contemporaneous sea-level with outlet channels to the Arafura Sea. A preliminary interpretation is presented of the palaeoenvironments recorded in six sediment cores collected by the IMAGES program in the Gulf of Carpentaria. The longest core (approx. 15 m) spans the past 130 ka and includes a record of sea-level/lake-level changes, with particular complexity between 80 and 40 ka when sea-level repeatedly breached and withdrew from Gulf/Lake Carpentaria. Evidence from biotic remains (foraminifers, ostracods, pollen), sedimentology and geochemistry clearly identifies a final marine transgression at about 9.7 ka (radiocarbon years). Before this transgression, Lake Carpentaria was surrounded by grassland, was near full, and may have had a surface area approaching 600 km×300 km and a depth of about 15 m. The earlier rise in sea-level which accompanied the Marine Isotopic Stage 6/5 transgression at about 130 ka is constrained by sedimentological and biotic evidence and dated by optical- and thermoluminescence and amino acid racemisation methods.

Gulf Of Carpentaria↗
USGS2003

Evolution of CAM and C 4 carbon-concentrating mechanisms

Mechanisms for concentrating carbon around the Rubisco enzyme, which drives the carbon-reducing steps in photosynthesis, are widespread in plants; in vascular plants they are known as crassulacean acid metabolism (CAM) and C 4 photosynthesis. CAM is common in desert succulents, tropical epiphytes, and aquatic plants and is characterized by nighttime fixation of CO2. The proximal selective factor driving the evolution of this CO2-concentrating pathway is low daytime CO2, which results from the unusual reverse stomatal behavior of terrestrial CAM species or from patterns of ambient CO2 availability for aquatic CAM species. In terrestrials the ultimate selective factor is water stress that has selected for increased water use efficiency. In aquatics the ultimate selective factor is diel fluctuations in CO2 availability for palustrine species and extreme oligotrophic conditions for lacustrine species. C4 photosynthesis is based on similar biochemistry but carboxylation steps are spatially separated in the leaf rather than temporally as in CAM. This biochemical pathway is most commonly associated with a specialized leaf anatomy known as Kranz anatomy; however, there are exceptions. The ultimate selective factor driving the evolution of this pathway is excessively high photorespiration that inhibits normal C3 photosynthesis under high light and high temperature in both terrestrial and aquatic habitats. CAM is an ancient pathway that likely has been present since the Paleozoic era in aquatic species from shallow-water palustrine habitats. While atmospheric CO2 levels have undoubtedly affected the evolution of terrestrial plant carbon-concentrating mechanisms, there is reason to believe that past atmospheric changes have not played as important a selective role in the aquatic milieu since palustrine habitats today are not generally carbon sinks, and the selective factors driving aquatic CAM are autogenic. Terrestrial CAM, in contrast, is of increasing selective value under extreme water deficits, and undoubtedly, high Mesozoic CO2 levels reduced the amount of landscape perceived by plants as water limited. Late Tertiary and Quaternary reductions in atmospheric CO2, coupled with increasing seasonality, were probably times of substantial species radiation and ecological expansion for CAM plants. C4 photosynthesis occurs in only about half as many families as CAM, and three-fourths of C4 species are either grasses or sedges. Molecular phylogenies indicate C4 is a more recent innovation than CAM and that it originated in the mid-Tertiary, 20–30 Ma, although some data support an earlier origin. While the timing of the origin of C4 remains controversial, the nearly explosive increase in C4 species is clearly documented in the late Miocene, 4–7 Ma. Increasing seasonality has been widely suggested as an important climatic stimulus for this C4 expansion. Alternatively, based on models of photosynthetic quantum yield at different temperatures and CO2 concentration, it has been hypothesized that the late Miocene C4 expansion resulted from declining atmospheric CO2 levels. This model is most appropriate for explaining the transition from C3 grasslands to C4 grasslands but by itself may not be sufficient to explain the more likely scenario of a late Miocene transition from C3 woodland/ savanna to C4 grasslands. A largely unexplored hypothesis is that climatic changes in late Miocene altered disturbance regimes, in particular the incidence of fires, which today are often associated with maintenance of C4 grasslands. Oceanic charcoal sediments that appear to represent Aeolian deposits from continental wildfires follow a strikingly similar pattern of explosive increase in late Miocene. Climate, CO2, and disturbance are not mutually exclusive explanations and probably all acted in concert to promote the expansion of C4 grasslands. More recently, late Quaternary changes in CO2 may have been responsible for driving major changes in the landscape distribution of C4 species. The theory is sound; however, many of the studies cited in support of this model are open to alternative interpretations, and none has eliminated climatic factors as important selective agents. CAM and C4 evolution required coupling of biochemical pathways with structural changes in photosynthetic tissues, succulence in CAM and Kranz in C4. This was apparently accomplished by piecemeal evolution beginning with mechanisms for recapturing respiratory CO2, although this need not have been so in aquatic CAM species. It has been proposed that the extreme rarity of both pathways in the same plant results from biochemical and structural incompatibilities (Sage 2002). Equally important is the fact that the selective environments are quite different, with CAM evolution thriving on stressful sites inhospitable to C3 species whereas C4 evolution has selected for rapid growth capable of outcompeting associated C3 plants.

International Journal of Plant Sciences↗