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At least 973 records · Page 54Linked to original sources
USGS2000

MODFLOW-2000, the U.S. Geological Survey Modular Ground-Water Model; documentation of packages for simulating evapotranspiration with a segmented function (ETS1) and drains with return flow (DRT1)

Two new packages for the U.S. Geological Survey modular finite-difference ground-water-flow model MODFLOW-2000 are documented. The new packages provide flexibility in simulating evapotranspiration and drain features not provided by the MODFLOW-2000 Evapotranspiration (EVT) and Drain (DRN) Packages. The report describes conceptualization of the packages, input instructions, listings and explanations of the source code, and example simulations. The new Evapotranspiration Segments (ETS1) Package allows simulation of evapotranspiration with a user-defined relation between evapotranspiration rate and hydraulic head. This capability provides a degree of flexibility not supported by the EVT Package, which has been available in MODFLOW since its initial release. In the ETS1 Package, the relation of evapotranspiration rate to hydraulic head is conceptualized as a segmented line between an evaporation surface, defined as the elevation where the evapotranspiration rate reaches a maximum, and an elevation located at an extinction depth below the evaporation surface, where the evapotranspiration rate reaches zero. The user supplies input to define as many intermediate segment endpoints as desired to define the relation of evapotranspiration rate to head between these two elevations. The EVT Package, in contrast, simulates evapotranspiration with a single linear function. The new Drain Return (DRT1) Package can be used to simulate the return flow of water discharged from a drain feature back into the ground-water system. The DRN Package, which has been available in MODFLOW since its initial release, does not have the capability to simulate return of flow. If the return-flow option of the DRT1 Package is selected, for each cell designated as a drain-return cell, the user has the option of specifying a proportion of the water simulated as leaving the ground-water system through the drain feature that is to be simulated as returning simultaneously to one other cell in the model.

Open-File Report↗
USGS2000

Simulation of ground water flow in the Glaciofluvial, Saginaw, Parma-Bayport, and Marshall Aquifers, Central Lower Peninsula of Michigan

A steady-state finite difference model was developed to simulate ground-water flow in four regional aquifers in Michigan’s Lower Peninsula. The Glaciofluvial, Saginaw, Parma-Bayport, and Marshall aquifers were simulated as layers 1 through 4, respectively, in the model. Separately calculated vertical conductances input to the model were used to simulate the intervening Till/“Red Beds”, Saginaw, and Michigan confining units, respectively. The model domain was laterally bound by a continuous specifiedhead boundary, formed from Lakes Michigan, Huron, St. Clair, and Erie, together with the St. Clair and Detroit River connecting channels. The model was developed to quantify regional ground-water flow in the aquifer systems using independently determined recharge estimates. The flow model showed that groundwater heads and flows in the Glaciofluvial aquifer are controlled by local stream stages and discharges, resulting in localized flow cells accounting for 95-percent of the overall model water budget. Simulation of recharge to an unspecified water table also enabled the estimation of ground-water discharge to three Great Lakes. A computer diskette contains all MODFLOW and MODFLOWP input files, as well as digital model surfaces and several Fortran processing routines used to construct the surfaces. The diskette also provides the data used for calibration and sensitivity analysis.

Michigan↗
USGS2000

Creating a standardized watersheds database for the lower Rio Grande/Rio Bravo, Texas

This report describes the creation of a large-scale watershed database for the lower Rio Grande/Rio Bravo Basin in Texas. The watershed database includes watersheds delineated to all 1:24,000-scale mapped stream confluences and other hydrologically significant points, selected watershed characteristics, and hydrologic derivative datasets. Computer technology allows generation of preliminary watershed boundaries in a fraction of the time needed for manual methods. This automated process reduces development time and results in quality improvements in watershed boundaries and characteristics. These data can then be compiled in a permanent database, eliminating the time-consuming step of data creation at the beginning of a project and providing a stable base dataset that can give users greater confidence when further subdividing watersheds. A standardized dataset of watershed characteristics is a valuable contribution to the understanding and management of natural resources. Vertical integration of the input datasets used to automatically generate watershed boundaries is crucial to the success of such an effort. The optimum situation would be to use the digital orthophoto quadrangles as the source of all the input datasets. While the hydrographic data from the digital line graphs can be revised to match the digital orthophoto quadrangles, hypsography data cannot be revised to match the digital orthophoto quadrangles. Revised hydrography from the digital orthophoto quadrangle should be used to create an updated digital elevation model that incorporates the stream channels as revised from the digital orthophoto quadrangle. Computer-generated, standardized watersheds that are vertically integrated with existing digital line graph hydrographic data will continue to be difficult to create until revisions can be made to existing source datasets. Until such time, manual editing will be necessary to make adjustments for man-made features and changes in the natural landscape that are not reflected in the digital elevation model data.

Texas↗
USGS2000

Geochemistry of sulfur in the Florida Everglades: 1994 through 1999

In this report, we present data on the geochemistry of sulfur in sediments and in surface water, groundwater, and rainwater in the Everglades region in south Florida. The results presented here are part of a larger study intended to determine the roles played by the cycling of carbon, nitrogen, phosphorus, and sulfur in the ecology of the south Florida wetlands. The geochemistry of sulfur in the region is particularly important because of its link to the production of toxic methylmercury through processes mediated by sulfate reducing bacteria. Sediment cores were collected from the Everglades Agricultural Area (EAA), Water Conservation Areas (WCAs) 1A and 2A, from Lake Okeechobee, and from Taylor Slough in the southern Everglades. Water collection was more widespread and includes surface water from WCAs 1A, 2A, 3A, 2B, the EAA, Taylor Slough, Lake Okeechobee, and the Kissimmee River. Groundwater was collected from The Everglades Nutrient Removal Area (ENR) and from WCA 2A. Rainwater was collected at two month intervals over a period of one year from the ENR and from WCA 2A. Water was analyzed for sulfate concentration and sulfate sulfur stable isotopic ratio (34S/32S). Sediment cores were analyzed for total sulfur concentration and/or for concentrations of sulfur species (sulfate, organic sulfur, disulfides, and acid volatile sulfides (AVS)) and for their stable sulfur isotopic ratio. Results show a decrease in total sulfur content (1.57 to 0.61 percent dry weight) with depth in two sediment cores collected in WCA 2A, indicating that there has been an increase in total sulfur content in recent times. A sediment core from the center of Lake Okeechobee shows a decrease in total sulfur content with depth (0.28 to 0.08 percent dry weight). A core from the periphery of the lake (South Bay) likewise shows a decrease in total sulfur content with depth (1.00 to 0.69 percent dry weight), however, the overall sulfur content is greater than that near the center at all depths. This suggests input of sulfur in recent times, especially near the lake margins. Sediments show a general decrease in sulfur concentration with depth, probably because of increases in sulfur input to the marshes in recent times. Regional differences in the concentrations and stable isotopic ratios of sulfate sulfur in surface water show that sulfur contamination to the northern Everglades likely originates from canals draining the EAA.

Florida↗
USGS2001

MODFLOW-2000, the U.S. Geological Survey modular ground-water model: User guide to the LMT6 package, the linkage with MT3DMS for multi-species mass transport modeling

MODFLOW-2000, the newest version of MODFLOW, is a computer program that numerically solves the three-dimensional ground-water flow equation for a porous medium using a finite-difference method. MT3DMS, the successor to MT3D, is a computer program for modeling multi-species solute transport in three-dimensional ground-water systems using multiple solution techniques, including the finite-difference method, the method of characteristics (MOC), and the total-variation-diminishing (TVD) method. This report documents a new version of the Link-MT3DMS Package, which enables MODFLOW-2000 to produce the information needed by MT3DMS, and also discusses new visualization software for MT3DMS. Unlike the Link-MT3D Packages that coordinated previous versions of MODFLOW and MT3D, the new Link-MT3DMS Package requires an input file that, among other things, provides enhanced support for additional MODFLOW sink/source packages and allows list-directed (free) format for the flow model produced flow-transport link file. The report contains four parts: (a) documentation of the Link-MT3DMS Package Version 6 for MODFLOW-2000; (b) discussion of several issues related to simulation setup and input data preparation for running MT3DMS with MODFLOW-2000; (c) description of two test example problems, with comparison to results obtained using another MODFLOW-based transport program; and (d) overview of post-simulation visualization and animation using the U.S. Geological Survey?s Model Viewer.

Open-File Report↗
USGS2002

Abstracts of the annual Planetary Geologic Mappers Meeting, June 18-19, 2001, Albuquerque, New Mexico

The annual Planetary Geologic Mappers Meeting serves two purposes. In addition to giving mappers the opportunity to exchange ideas, experiences, victories, and problems with others, presentations are reviewed by the Geologic Mapping Subcommittee (GeMS) to provide input to the Planetary Geology and Geophysics Mapping Program review panel’s consideration of new proposals and progress reports that include mapping tasks. Funded mappers bring both oral presentation materials (slides or viewgraphs) and map products to post for review by GeMS and fellow mappers. Additionally, the annual meetings typically feature optional field trips offering earth analogs and parallels to planetary mapping problems. The 2001 Mappers Meeting, June 18-19, was convened by Tim Parker, Dave Senske, and Ken Tanaka and was hosted by Larry Crumpler and Jayne Aubele of the New Mexico Museum of Natural History and Science in Albuquerque, New Mexico. Oral presentations were given in the Museum’s Honeywell Auditorium, and maps were posted in the Sandia Room. In addition to active mappers, guests included local science teachers who had successfully competed for the right to attend and listen to the reports. It was a unique pleasure for mappers to have the opportunity to interact with and provide information to teachers responding so enthusiastically to the meeting presentation. On Sunday, June 17, Larry and Jayne conducted an optional pre-meeting field trip. The flanks of Rio Grande Rift, east and west of Albuquerque and Valles Caldera north of town presented tectonic, volcanic, and sedimentary examples of the Rift and adjoining areas analogous to observed features on Mars and Venus. The arid but volcanically and tectonically active environment of New Mexico’s rift valley enables focus on features that appear morphologically young and spectacular in satellite images and digital relief models. The theme of the trip was to see what, at orbiter resolution, "obvious" geologic features look like at lander (outcrop) scales. Trips to the top of the rift-flanking mountains (Sandia Peak, 10,600 ft) and the Valles Caldera, as well as various active spring deposits highlighted the day. After welcoming remarks from the host, Larry Crumpler, opening remarks by Tim Parker and Dave Senske and a report on mapping program status by Ken Tanaka, the mappers’ oral presentations began the morning of June 18, with a session on Venus Geologic Mapping. The afternoon continued with an exciting USGS Planetary GIS on the Web (PIGWAD) demonstration and ended with an open discussion of issues in planetary mapping. Posted maps of Venus quadrangles were viewed during the morning break. Tuesday’s Mars Geologic Mapping session began with a pep talk from Tim Parker encouraging mapping community input to the MER landing site selection committee and continued with Steve Saunders describing the potential contribution of Odyssey Mission data to the geologic mapping of Mars. A Mars map poster session was held during the morning break, and the meeting was adjourned mid-afternoon. After the mappers meeting on Tuesday, attendants were treated to a "Field trip to Mars." The Institute of Meteoritics at the University of New Mexico houses an outstanding collection of meteorites, including those that have been identified as originating from Mars. The Institute tour featured examples of most of the different lithologies exhibited by martian meteorites identified to date, as well as some of the analytical tests (scanning electron microscope) they are conducting on specimens from ALH84001. Wednesday, June 20, featured an optional post-meeting field trip to see a travertine quarry and nearby sites of travertine deposition, the Very Large Array near Socorro, and other volcanic features within the Rio Grande Rift.

New Mexico↗
USGS2003

MODFLOW-2000, the U.S. Geological Survey modular ground-water model -- Documentation of MOD-PREDICT for predictions, prediction sensitivity analysis, and evaluation of uncertainty

This document describes the MOD-PREDICT program, which helps evaluate userdefined sets of observations, prior information, and predictions, using the ground-water model MODFLOW-2000. MOD-PREDICT takes advantage of the existing Observation and Sensitivity Processes (Hill and others, 2000) by initiating runs of MODFLOW-2000 and using the output files produced. The names and formats of the MODFLOW-2000 input files are unchanged, such that full backward compatibility is maintained. A new name file and input files are required for MOD-PREDICT. The performance of MOD-PREDICT has been tested in a variety of applications. Future applications, however, might reveal errors that were not detected in the test simulations. Users are requested to notify the U.S. Geological Survey of any errors found in this document or the computer program using the email address available at the web address below. Updates might occasionally be made to this document, to the MOD-PREDICT program, and to MODFLOW- 2000. Users can check for updates on the Internet at URL http://water.usgs.gov/software/ground water.html/.

Open-File Report↗
USGS2004

Binational digital soils map of the Ambos Nogales watershed, southern Arizona and northern Sonora, Mexico

We have prepared a digital map of soil parameters for the international Ambos Nogales watershed to use as input for selected soils-erosion models. The Ambos Nogales watershed in southern Arizona and northern Sonora, Mexico, contains the Nogales wash, a tributary of the Upper Santa Cruz River. The watershed covers an area of 235 km2, just under half of which is in Mexico. Preliminary investigations of potential erosion revealed a discrepancy in soils data and mapping across the United States-Mexican border due to issues including different mapping resolutions, incompatible formatting, and varying nomenclature and classification systems. To prepare a digital soils map appropriate for input to a soils-erosion model, the historical analog soils maps for Nogales, Ariz., were scanned and merged with the larger-scale digital soils data available for Nogales, Sonora, Mexico using a geographic information system.

Arizona, Sonora↗
USGS2005

The New Hampshire watershed tool: a geographic information system tool to estimate streamflow statistics and ground-water-recharge rates

Estimates of low-flow statistics, flow durations, and ground-water-recharge rates are needed to assist water-resource managers in assessing surface-water resources and ground-water availability. Often these estimates are required at ungaged sites where no observed streamflow data are available for analysis. Regression equations for estimating low-flow statistics and flow durations, and for estimating ground-water-recharge rates at ungaged sites have been developed for New Hampshire. However, use of these equations requires numerous input parameters, such as basin and climatic characteristics. This report describes a customized geographic information system (GIS) application, the New Hampshire Watershed Tool, that automates the measurement of the characteristics used for input to the regression equations and calculates the corresponding flow statistics and ground-water-recharge rates.

Open-File Report↗
USGS2005

Evaluation of unsaturated-zone solute-transport models for studies of agricultural chemicals

Seven unsaturated-zone solute-transport models were tested with two data sets to select models for use by the Agricultural Chemical Team of the U.S. Geological Survey's National Water-Quality Assessment Program. The data sets were from a bromide tracer test near Merced, California, and an atrazine study in the White River Basin, Indiana. In this study the models are designated either as complex or simple based on the water flux algorithm. The complex models, HYDRUS2D, LEACHP, RZWQM, and VS2DT, use Richards' equation to simulate water flux and are well suited to process understanding. The simple models, CALF, GLEAMS, and PRZM, use a tipping-bucket algorithm and are more amenable to extrapolation because they require fewer input parameters. The purpose of this report is not to endorse a particular model, but to describe useful features, potential capabilities, and possible limitations that emerged from working with the model input data sets. More rigorous assessment of model applicability involves proper calibration, which was beyond the scope of this study. Uncalibrated ("cold") simulations were run using all seven models to predict the transport of bromide (Merced) and the transport and fate of atrazine and three of its transformation products (White River Basin). Among the complex models, HYDRUS2D successfully predicted both the surface retention and accumulation of bromide at depth at the Merced site, whereas RZWQM and VS2DT predicted only the latter. RZWQM predictions of atrazine were closest to observed values at the White River Basin site, where preferential flow has been observed. LEACHP predicted smaller solute concentrations than observed at both the Merced and White River Basin sites. Among the simple models, CALF predicted the highest values of atrazine and deethylatrazine at the measurement depth of 1.5 meters. CALF includes the Addiscott flow option for preferential flow, and also accepts user-specified dispersivity. PRZM underpredicted solute concentrations, probably because control of dispersion is a problem with this model. GLEAMS has a maximum simulation depth of 1.5 meters, which is limiting for mass-balance purposes because it creates a potential disconnect between unsaturated-zone transport and the water table. Of the models tested, RZWQM, HYDRUS2D, VS2DT, GLEAMS and PRZM had graphical user interfaces. Extensive documentation was available for RZWQM, HYDRUS2D, and VS2DT. RZWQM can explicitly simulate water and solute flux in macropores, and both HYDRUS2D and VS2DT can simulate water and solute flux in two dimensions. The version of RZWQM tested had a maximum simulation depth of 3 meters. The complex models simulate the formation, transport, and fate of degradates of up to three to five compounds including the parent, with the exception of VS2DT, which simulates the transport and fate of a single compound.

California, Indiana↗
USGS2006

Petroleum system modeling capabilities for use in oil and gas resource assessments

Summary: Petroleum resource assessments are among the most highly visible and frequently cited scientific products of the U.S. Geological Survey. The assessments integrate diverse and extensive information on the geologic, geochemical, and petroleum production histories of provinces and regions of the United States and the World. Petroleum systems modeling incorporates these geoscience data in ways that strengthen the assessment process and results are presented visually and numerically. The purpose of this report is to outline the requirements, advantages, and limitations of one-dimensional (1-D), two-dimensional (2-D), and three-dimensional (3-D) petroleum systems modeling that can be applied to the assessment of oil and gas resources. Primary focus is on the application of the Integrated Exploration Systems (IES) PetroMod? software because of familiarity with that program as well as the emphasis by the USGS Energy Program on standardizing to one modeling application. The Western Canada Sedimentary Basin (WCSB) is used to demonstrate the use of the PetroMod? software. Petroleum systems modeling quantitatively extends the 'total petroleum systems' (TPS) concept (Magoon and Dow, 1994; Magoon and Schmoker, 2000) that is employed in USGS resource assessments. Modeling allows integration of state-of-the-art analysis techniques, and provides the means to test and refine understanding of oil and gas generation, migration, and accumulation. Results of modeling are presented visually, numerically, and statistically, which enhances interpretation of the processes that affect TPSs through time. Modeling also provides a framework for the input and processing of many kinds of data essential in resource assessment, including (1) petroleum system elements such as reservoir, seal, and source rock intervals; (2) timing of depositional, hiatus, and erosional events and their influences on petroleum systems; (3) incorporation of vertical and lateral distribution and lithologies of strata that compose the petroleum systems; and (4) calculations of pressure-volume-temperature (PVT) histories. As digital data on petroleum systems continue to expand, the models can integrate these data into USGS resource assessments by building and displaying, through time, areas of petroleum generation, migration pathways, accumulations, and relative contributions of source rocks to the hydrocarbon components. IES PetroMod? 1-D, 2-D, and 3-D models are integrated such that each uses the same variables for petroleum systems modeling. 1-D burial history models are point locations, mainly wells. Maps and cross-sections model geologic information in two dimensions and can incorporate direct input of 2-D seismic data and interpretations using various formats. Both 1-D and 2-D models use data essential for assessments and, following data compilation, they can be completed in hours and retested in minutes. Such models should be built early in the geologic assessment process, inasmuch as they incorporate the petroleum system elements of reservoir, source, and seal rock intervals with associated lithologies and depositional and erosional ages. The models can be used to delineate the petroleum systems. A number of 1-D and 2-D models can be constructed across a geologic province and used by the assessment geologists as a 3-D framework of processes that control petroleum generation, migration, and accumulation. The primary limitation of these models is that they only represent generation, migration, and accumulation in two dimensions. 3-D models are generally built at reservoir to basin scales. They provide a much more detailed and realistic representation of petroleum systems than 1-D or 2-D models because they portray more fully the temporal and physical relations among (1) burial history; (2) lithologies and associated changes through burial in porosity, permeability, and compaction; (3) hydrodynamic effects; and (4) other parameters that influence petroleum gen

Open-File Report↗
USGS2008

Development of the water-analysis screening tool used in the initial screening for the Pennsylvania State Water Plan update of 2008

The Water Resources Planning Act, Act 220 of 2002, requires the Pennsylvania Department of Environmental Protection (PaDEP) to update the State Water Plan by 2008. As part of this update, a water-analysis screening tool (WAST) was developed by the U.S. Geological Survey, in cooperation with the PaDEP, to provide assistance to the state in the identification of critical water-planning areas. The WAST has two primary inputs: net withdrawals and the initial screening criteria. A comprehensive water-use database that includes data from registration, estimation, discharge monitoring reports, mining data, and other sources was developed as input into the WAST. Water use in the following categories was estimated using water-use factors: residential, industrial, commercial, agriculture, and golf courses. A percentage of the 7-day, 10-year low flow is used for the initial screenings using the WAST to identify potential critical water-planning areas. This quantity, or initial screening criteria, is 50 percent of the 7-day, 10-year low flow for most streams. Using a basic water-balance equation, a screening indicator is calculated that indicates the potential influences of net withdrawals on aquatic-resource uses for watersheds generally larger than 15 square miles. Points representing outlets of these watersheds are colored-coded within the WAST to show the screening criteria for each watershed.

Open-File Report↗
USGS2008

Data to support statistical modeling of instream nutrient load based on watershed attributes, southeastern United States, 2002

This report presents and describes the digital datasets that characterize nutrient source inputs, environmental characteristics, and instream nutrient loads for the purpose of calibrating and applying a nutrient water-quality model for the southeastern United States for 2002. The model area includes all of the river basins draining to the south Atlantic and the eastern Gulf of Mexico, as well as the Tennessee River basin (referred to collectively as the SAGT area). The water-quality model SPARROW (SPAtially-Referenced Regression On Watershed attributes), developed by the U.S. Geological Survey, uses a regression equation to describe the relation between watershed attributes (predictors) and measured instream loads (response). Watershed attributes that are considered to describe nutrient input conditions and are tested in the SPARROW model for the SAGT area as source variables include atmospheric deposition, fertilizer application to farmland, manure from livestock production, permitted wastewater discharge, and land cover. Watershed and channel attributes that are considered to affect rates of nutrient transport from land to water and are tested in the SAGT SPARROW model as nutrient-transport variables include characteristics of soil, landform, climate, reach time of travel, and reservoir hydraulic loading. Datasets with estimates of each of these attributes for each individual reach or catchment in the reach-catchment network are presented in this report, along with descriptions of methods used to produce them. Measurements of nutrient water quality at stream monitoring sites from a combination of monitoring programs were used to develop observations of the response variable - mean annual nitrogen or phosphorus load - in the SPARROW regression equation. Instream load of nitrogen and phosphorus was estimated using bias-corrected log-linear regression models using the program Fluxmaster, which provides temporally detrended estimates of long-term mean load well-suited for spatial comparisons. The detrended, or normalized, estimates of load are useful for regional-scale assessments but should be used with caution for local-scale interpretations, for which use of loads estimated for actual time periods and employing more detailed regression analysis is suggested. The mean value of the nitrogen yield estimates, normalized to 2002, for 637 stations in the SAGT area is 4.7 kilograms per hectare; the mean value of nitrogen flow-weighted mean concentration is 1.2 milligrams per liter. The mean value of the phosphorus yield estimates, normalized to 2002, for the 747 stations in the SAGT area is 0.66 kilogram per hectare; the mean value of phosphorus flow-weighted mean concentration is 0.17 milligram per liter. Nutrient conditions measured in streams affected by substantial influx or outflux of water and nutrient mass across surface-water basin divides do not reflect nutrient source and transport conditions in the topographic watershed; therefore, inclusion of such streams in the SPARROW modeling approach is considered inappropriate. River basins identified with this concern include south Florida (where surface-water flow paths have been extensively altered) and the Oklawaha, Crystal, Lower Sante Fe, Lower Suwanee, St. Marks, and Chipola River basins in central and northern Florida (where flow exchange with the underlying regional aquifer may represent substantial nitrogen influx to and outflux from the surface-water basins).

Open-File Report↗
USGS2009

Computer programs for obtaining and analyzing daily mean streamflow data from the U.S. Geological Survey National Water Information System web site

Five computer programs were developed for obtaining and analyzing streamflow from the National Water Information System (NWISWeb). The programs were developed as part of a study by the U.S. Geological Survey, in cooperation with the Federal Highway Administration, to develop a stochastic empirical loading and dilution model. The programs were developed because reliable, efficient, and repeatable methods are needed to access and process streamflow information and data. The first program is designed to facilitate the downloading and reformatting of NWISWeb streamflow data. The second program is designed to facilitate graphical analysis of streamflow data. The third program is designed to facilitate streamflow-record extension and augmentation to help develop long-term statistical estimates for sites with limited data. The fourth program is designed to facilitate statistical analysis of streamflow data. The fifth program is a preprocessor to create batch input files for the U.S. Environmental Protection Agency DFLOW3 program for calculating low-flow statistics. These computer programs were developed to facilitate the analysis of daily mean streamflow data for planning-level water-quality analyses but also are useful for many other applications pertaining to streamflow data and statistics. These programs and the associated documentation are included on the CD-ROM accompanying this report. This report and the appendixes on the CD-ROM describe the implementation and use of the programs and the interpretation of results from the programs. The body of this report provides an overview of the five programs included on this CD-ROM. The appendixes are the software manuals for each program. These manuals describe statistical and numerical methods used to implement each program, input-file formats, output-file formats, installation of the programs, and use of the programs. Each appendix is written as a self-contained manual because each program may have many uses alone or in tandem with other programs on the CD-ROM. Each of these programs uses graphical user interface that follows standard Microsoft Windows interface conventions.

Open-File Report↗
USGS2009

Coastal Processes Study of Santa Barbara and Ventura Counties, California

The Santa Barbara littoral cell (SBLC) is a complex coastal system with significant management challenges. The coastline ranges broadly in exposure to wave energy, fluvial inputs, hard structures, and urbanization. Geologic influence (structural control) on coastline orientation exerts an important control on local beach behavior, with anthropogenic alterations and the episodic nature of sediment supply and transport also playing important roles. Short- and long-term temporal analyses of shoreline change, beach width, and volume change show no obvious trends in regional beach behavior. Extensive armoring along the SBLC has accreted the back beach, narrowing beach widths and in some cases increasing sediment transport. Unarmored beaches have exhibited mild erosion while maintaining similar widths. Harbor constructions have had notable impacts on downdrift beaches, but once the coastal system has equilibrated the signal becomes strongly dampened and littoral-drift gradients driven by natural shoreline orientation again become dominant. Sediment inputs from the Santa Clara River dominate sediment processes on beaches to the south. The SBLC is dominated by episodic flood and storm-wave events. Exceptionally large accretion signals along this stretch of coastline are closely tied to major flood events when large amounts of sediment are deposited in deltas. These deltas decay over time, supplying downdrift beaches with sediment. Storm-wave impacts and gradients in alongshore transport can lead to beach rotations and migrating erosion hotspots when geological controls are weak. Annual and seasonal rates of cross-shore and alongshore transport are at least 2-3 times higher for the more west- and southwest-facing beaches south of the Ventura River as compared to the more sheltered beaches to the west/north. Gross littoral transports are good approximations of net littoral transports for beaches west/north of Ventura as transport is almost purely unidirectional. However, significant transport reversals occur intermittently in the east/south, especially adjacent to the Ventura and Channel Islands Harbors. For this reason, and due to the episodic nature of flood and storm wave events, using dredging rates from the harbors at Ventura and Channel Islands as a proxy for drift rates may be invalid. An extensive grain-size investigation of the surface and shallow subsurface in the nearshore region of the SBLC identified only two sites for potential beach-nourishment material: offshore of Santa Barbara Harbor and Oil Piers. However, seismic-reflection lines offshore of Santa Barbara suggest shallow bedrock (< 1 m), so the volume of coarse material in this area may be limited. Sampling of the Santa Clara River delta was minimal, but this site could be promising. Numerical modeling shows that local beach behavior is primarily influenced by local littoral-drift gradients, which are in turn controlled by natural shoreline orientation. Given the high rates of net littoral drift and the relatively insignificant cross-shore transport in the SBLC, the SBLC should be considered a sediment-limited system (as opposed to a transport-limited system). Management actions, such as any future beach nourishment, would likely have a severely limited life span without employing additional measures that adequately address local littoral-drift gradients to retain added sand.

Open-File Report↗
USGS2009

Estimation of Missing Water-Level Data for the Everglades Depth Estimation Network (EDEN)

The Everglades Depth Estimation Network (EDEN) is an integrated network of real-time water-level gaging stations, ground-elevation models, and water-surface elevation models designed to provide scientists, engineers, and water-resource managers with current (2000-2009) water-depth information for the entire freshwater portion of the greater Everglades. The U.S. Geological Survey Greater Everglades Priority Ecosystems Science provides support for EDEN and their goal of providing quality-assured monitoring data for the U.S. Army Corps of Engineers Comprehensive Everglades Restoration Plan. To increase the accuracy of the daily water-surface elevation model, water-level estimation equations were developed to fill missing data. To minimize the occurrences of no estimation of data due to missing data for an input station, a minimum of three linear regression equations were developed for each station using different input stations. Of the 726 water-level estimation equations developed to fill missing data at 239 stations, more than 60 percent of the equations have coefficients of determination greater than 0.90, and 92 percent have an coefficient of determination greater than 0.70.

Open-File Report↗
USGS2009

Benthic flux of nutrients and trace metals in the northern component of San Francisco Bay, California

Two sets of sampling trips were coordinated in late summer 2008 (weeks of July 8 and August 6) to sample the interstitial and overlying bottom waters at 10 shallow locations (9 sites <3 meters in depth) within the northern component of the San Francisco Bay/Delta (herein referred to as North Bay). The work was performed to better understand sources of biologically reactive solutes (namely, dissolved macronutrients and trace metals) that may affect the base of the food web in this part of the estuary. A nonmetallic pore-water profiler was used to obtain the first centimeter-scale estimates of the vertical solute-concentration gradients for diffusive-flux determinations. This study, performed in collaboration with scientists from San Francisco State University?s Romberg Tiburon Center for Environmental Studies, provides information to assist in developing and refining management strategies for the Bay/Delta system and supports efforts to monitor changes in food-web structure associated with regional habitat modifications directed by the California Bay-Delta Authority. On July 7, 2008, and August 5, 2008, pore-water profilers were successfully deployed at six North Bay sites per trip to measure the concentration gradient of dissolved macronutrients and trace metals near the sediment-water interface. Only two of the sites (433 and SSB009 within Honker Bay) were sampled in both series of profiler deployments. At each sampling site, profilers were deployed in triplicate, while discrete samples and dataloggers were used to collect ancillary data from both the water column and benthos to help interpret diffusive-flux measurements. Benthic flux of dissolved (0.2-micron filtered) inorganic phosphate (that is, soluble reactive phosphorus (SRP)) ranged from negligible levels (-0.003?0.005 millimole per square meter per day (mmole m-2d-1) at Site 4.1 outside Honker Bay) to 0.060?0.006 mmole m-2d-1 near the northern coast of Brown?s Island. Except for the elevated flux at Browns Island, the benthic flux of soluble reactive phosphorus (SRP) was consistently: (1) lower than previously reported for South Bay sites, (2) an order of magnitude lower than oligotrophic Coeur d?Alene Lake, (3) two orders of magnitude lower than determined for eutrophic Upper Klamath Lake, and (4) an order of magnitude or more lower than the estimated summer riverine inputs for SRP (900 to 1,300 kilograms of phosphorous per day (kg-P d-1)). In contrast to fluxes reported for the South Bay, nitrate fluxes were consistently negative (that is, drawn from the water column into the sediment), except for one site with statistically insignificant nitrate fluxes (Site 409 within Suisun Bay). The most negative nitrate flux (-7.3?0.1 mmole m-2d-1) was observed within Grizzly Bay (Site 416). Observed nitrate fluxes bracketed the estimated summer fluvial flux of nitrate (3,500 to 5,000 kg-N d-1). With the exception of the two Grizzly Bay sites (416 and 417), the consistently positive benthic flux of ammonia generally counteracted the negative flux of nitrate to yield a net balance of dissolved inorganic nitrogen. Ammonia benthic fluxes extrapolated for Suisun Bay ranged from 320 kg-N d-1 (Site SSB009 near the entrance to Honker Bay) to 1,900 kg-N d-1 (Montezuma Island). These values represent a significant ammonia source to the water column relative to summer riverine inputs (approximately 400 to 600 kg-N d-1). Dissolved silica also displayed a consistently positive benthic flux, except for Site 409 within Suisun Bay, which showed insignificant fluxes (also insignificant for nitrate and SRP). As with the nitrate fluxes, Grizzly Bay and Browns Island sites yielded the highest dissolved silica fluxes (1.3?1.2 to 2.5?0.6 mmole m-2d-1, respectively). These initial diffusive-flux estimates are greater than those measured in the South Bay using core-incubation experiments, which include bioturbation and bioirrigation effects, but they are nevertheless probably one to t

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USGS2010

Simulation of Runoff and Reservoir Inflow for Use in a Flood-Analysis Model for the Delaware River, Pennsylvania, New Jersey, and New York, 2004-2006

A model was developed to simulate inflow to reservoirs and watershed runoff to streams during three high-flow events between September 2004 and June 2006 for the main-stem subbasin of the Delaware River draining to Trenton, N.J. The model software is a modified version of the U.S. Geological Survey (USGS) Precipitation-Runoff Modeling System (PRMS), a modular, physically based, distributed-parameter modeling system developed to evaluate the impacts of various combinations of precipitation, climate, and land use on surface-water runoff and general basin hydrology. The PRMS model simulates time periods associated with main-stem flooding that occurred in September 2004, April 2005, and June 2006 and uses both daily and hourly time steps. Output from the PRMS model was formatted for use as inflows to a separately documented reservoir and riverrouting model, the HEC-ResSim model, developed by the U.S. Army Corps of Engineers Hydrologic Engineering Center to evaluate flooding. The models were integrated through a graphical user interface. The study area is the 6,780 square-mile watershed of the Delaware River in the states of Pennsylvania, New Jersey, and New York that drains to Trenton, N.J. A geospatial database was created for use with a geographic information system to assist model discretization, determine land-surface characterization, and estimate model parameters. The USGS National Elevation Dataset at 100-meter resolution, a Digital Elevation Model (DEM), was used for model discretization into streams and hydrologic response units. In addition, geospatial processing was used to estimate initial model parameters from the DEM and other data layers, including land use. The model discretization represents the study area using 869 hydrologic response units and 452 stream segments. The model climate data for point stations were obtained from multiple sources. These sources included daily data for 22 National Weather Service (NWS) Cooperative Climate Station network stations, hourly data for 15 stations from the National Climatic Data Center, hourly data for 1 station from the NWS Middle Atlantic River Forecast Center records, and daily and hourly data for 7 stations operated by the New York City Department of Environmental Protection. The NWS Multisensor Precipitation Estimate data set for 2001-2007 was used for computing daily precipitation for the model and for computing hourly precipitation for storm simulation periods. Calibration of the PRMS model included regression and optimization algorithms, as well as manual adjustments of model parameters. The general goal of the calibration procedure was to minimize the difference between discharge measured at USGS streamgages and the corresponding discharge simulated by the model. Daily streamflow data from 35 USGS streamgages were used in model calibration. The streamflow data represent areas draining from 20.2 to 6,780 square miles. The PRMS model simulates reservoir inflow and watershed runoff for use as input into HECResSim for the purpose of evaluating and comparing the effects of different watershed conditions on main-stem flooding in the Delaware River watershed draining to Trenton, N.J. The PRMS model is useful as a planning tool to simulate the effects of land-use changes and different antecedent conditions on local runoff and reservoir inflow and, as input to the HEC-ResSim model, on flood flows in the main stem of the Delaware River.

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