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Assessing ecosystem effects of reservoir operations using food web-energy transfer and water quality models

We investigated the effects on the reservoir food web of a new temperature control device (TCD) on the dam at Shasta Lake, California. We followed a linked modeling approach that used a specialized reservoir water quality model to forecast operation-induced changes in phytoplankton production. A food web–energy transfer model was also applied to propagate predicted changes in phytoplankton up through the food web to the predators and sport fishes of interest. The food web–energy transfer model employed a 10% trophic transfer efficiency through a food web that was mapped using carbon and nitrogen stable isotope analysis. Stable isotope analysis provided an efficient and comprehensive means of estimating the structure of the reservoir's food web with minimal sampling and background data. We used an optimization procedure to estimate the diet proportions of all food web components simultaneously from their isotopic signatures. Some consumers were estimated to be much more sensitive than others to perturbations to phytoplankton supply. The linked modeling approach demonstrated that interdisciplinary efforts enhance the value of information obtained from studies of managed ecosystems. The approach exploited the strengths of engineering and ecological modeling methods to address concerns that neither of the models could have addressed alone: (a) the water quality model could not have addressed quantitatively the possible impacts to fish, and (b) the food web model could not have examined how phytoplankton availability might change due to reservoir operations.

Ecosystems↗

Global exploration and production capacity for platinum-group metals from 1995 through 2015

Platinum-group metals (PGMs) are required in a variety of commercial, industrial, and military applications for many existing and emerging technologies, yet the United States is highly dependent on foreign sources of PGMs. Information on global exploration for PGMs since 1995 has been used in this study as a basis for identifying locations where the industry has determined that exploration has provided data sufficient to warrant development of a new mine or expansion of an existing operation or where a significant increase in capacity for PGMs is anticipated by 2015. Discussions include an overview of the industry and the selected sites, factors affecting mineral supply, and circumstances leading to the development of mineral properties with the potential to affect mineral supply. Of the 52 sites or regional operations that were considered in this analysis, 16 sites were producing before 1995, 28 sites commenced production from 1995 through 2010, and 8 sites were expected to begin production from 2011 through 2015 if development plans came to fruition. The United States imports PGMs primarily from Canada, Russia, South Africa, and Zimbabwe to meet increasing demand for these materials in a variety of specialized and high-tech applications. Feed sources of PGMs are changing in South Africa and Russia, which together accounted for about 89 percent of platinum production and 82 percent of palladium production in 2009. A greater amount of South African PGM capacity is likely to come from deeper, higher cost Upper Group Reef seam 2 deposits and deposits in the Eastern Bushveld area. Future Russian PGM capacity is likely to come from ore zones with generally lower PGM content and different platinum-to-palladium ratios than the nickel-rich ore that dominated PGM supply in the 1990s. Because PGM supply from Canada and Russia is derived as a byproduct of copper and nickel mining, the PGM supply from these countries is influenced by economic, environmental, political, and technological factors affecting exploration for and development of copper and nickel, as well as factors affecting the PGM industry. The recovery of PGMs from mill tailings since 2004 and the recycling of PGMs from catalytic converters, electrical components, and jewelry has increased since 1995 so that recycled PGMs recovered from these products accounted for about 30 percent of the supply of platinum worldwide and 29 percent of the supply of palladium worldwide in 2010. Economic and geopolitical conditions have influenced PGM supply and demand. The global recession of 2008 and 2009 temporarily decreased demand for PGMs and constrained PGM mine exploration and development, at least through 2010. Legislation regulating the structure of the mining sector has affected mining in Russia, South Africa, and Zimbabwe. Stricter vehicle emissions standards in established markets since the 1980s have led to mandatory use of pollution control devices, such as catalytic converters, that contain PGMs and are required on vehicles in expanding markets, such as China and India. It is expected that South Africa, Russia, Canada, and Zimbabwe will continue to be the principal sources of PGM at least for the next decade. Based on this review of the PGM industry, the world’s platinum capacity, expressed in terms of recoverable platinum metal, increased from 1995 through 2010 by 77,000 kilograms (kg) in South Africa, 9,000 kg in Zimbabwe, 6,000 kg in Russia, 2,000 kg in Botswana, and 2,000 kg in Canada. For the same period, palladium capacity worldwide increased by 44,000 kg in South Africa, 22,000 kg in Russia, 8,000 kg in Canada, 8,000 kg in the United States, 7,000 kg in Zimbabwe, and 3,000 kg in Botswana. Platinum capacity worldwide is expected to further increase by 24,000 kg in South Africa, 9,000 kg in Russia, 3,000 kg in Canada, and 2,000 kg in Zimbabwe from 2011 through 2015. Palladium capacity worldwide is likewise expected to increase an additional 16,000 kg in Russia, 14,000 kg in South Africa, 4,000 kg in Zimbabwe, and 1,000 kg in Canada if new or expanded mine and associated processing capacity comes into production as planned. It is likely that the magnitude of these changes in PGM capacity has been influenced by such factors as the global economy, electrical capacity shortages and mine safety concerns in South Africa, and geopolitical conditions in the major PGM producing countries.

Scientific Investigations Report↗

Tools for quantifying isotopic niche space and dietary variation at the individual and population level.

Ecologists are increasingly using stable isotope analysis to inform questions about variation in resource and habitat use from the individual to community level. In this study we investigate data sets from 2 California sea otter ( Enhydra lutris nereis ) populations to illustrate the advantages and potential pitfalls of applying various statistical and quantitative approaches to isotopic data. We have subdivided these tools, or metrics, into 3 categories: IsoSpace metrics, stable isotope mixing models, and DietSpace metrics. IsoSpace metrics are used to quantify the spatial attributes of isotopic data that are typically presented in bivariate (e.g., δ 13 C versus δ 15 N) 2-dimensional space. We review IsoSpace metrics currently in use and present a technique by which uncertainty can be included to calculate the convex hull area of consumers or prey, or both. We then apply a Bayesian-based mixing model to quantify the proportion of potential dietary sources to the diet of each sea otter population and compare this to observational foraging data. Finally, we assess individual dietary specialization by comparing a previously published technique, variance components analysis, to 2 novel DietSpace metrics that are based on mixing model output. As the use of stable isotope analysis in ecology continues to grow, the field will need a set of quantitative tools for assessing isotopic variance at the individual to community level. Along with recent advances in Bayesian-based mixing models, we hope that the IsoSpace and DietSpace metrics described here will provide another set of interpretive tools for ecologists.

Journal of Mammalogy↗

Water quality of the lower Columbia River Basin: Analysis of current and historical water-quality data through 1994

The lower Columbia River Basin includes the river basins draining into the Columbia River below Bonneville Dam&mdash;the largest of which is the Willamette River. This report presents the results of a study by the U.S. Geological Survey, done in cooperation with the Lower Columbia River Bi-State Water- Quality Program, to describe the water-quality conditions in the lower Columbia River Basin by interpreting historical data collected and data collected in 1994. Historical water-quality data spanning more than 50 years and comprising more than 200 parameters were collated for interpretation in this report. The U.S. Geological Survey, the Oregon Department of Environmental Quality, and the Washington Department of Ecology collected water-quality data at 10 sites in the lower Columbia River Basin from January to December of 1994. Water-quality constituents measured in 1994 were screened against U.S. Environmental Protection Agency (EPA) and State guidelines. Arsenic, a human carcinogen, was detected in 15 of 16 samples in the lower Columbia River, but was not detected in any of the sampled tributaries. All 15 arsenic detections had concentrations that exceeded both the EPA ambient water-quality criteria for the protection of human health and the EPA human-health advisories for drinking water. Chromium was detected at all four Columbia River sites&mdash;most frequently in the Columbia River at Hayden Island. None of the chromium concentrations detected, however, exceeded water-quality criteria or guidelines. Measurements of suspended trace-element concentrations (trace-element concentrations associated with the suspended-sediment fraction) showed that the suspended form is the dominant transport phase for aluminum, iron, and manganese, whereas the dissolved form is the dominant transport phase for arsenic, barium, chromium, and copper. On the basis of tributary loads during summer low-flow months, sources of suspended silver, nickel, aluminum, and antimony exist in the lower Columbia River Basin, whereas the sources of suspended zinc and arsenic exist outside of the lower basin. Twenty organic compounds were detected of the 47 compounds analyzed for this study. None of the organic compounds measured exceeded EPA&rsquo;s ambient water-quality criteria or drinking-water guidelines. The Willamette River at Portland had the largest number of detections, and all 20 compounds were detected at one time or another at that site. The largest concentrations of the agricultural pesticides, atrazine, metolachlor, and simazine were detected in the Willamette River, where they were detected in 93, 86, 93 percent, respectively, of the samples collected. The highest concentrations of atrazine in the Willamette River were associated with the spring application and fall runoff periods. Both historical and current data showed that the highest water temperatures in the lower Columbia River Basin are present during August. For water years 1977&ndash;81 in the Columbia River at Bradwood (river mile 38.9), 75 percent of the daily mean water temperatures during August exceeded 20 degrees Celsius, a &ldquo;special condition&rdquo; criterion for the State of Washington. The special condition criterion was exceeded at four sites on the lower Columbia River during July and August, 1994&mdash;a period coinciding with season-high air temperatures and low streamflow. Trend tests using data from 1974 to 1994 showed significant (r < 0.05) upward trends for water temperature at the Columbia River at Warrendale and the Willamette River at Portland. Concentrations of dissolved oxygen and total dissolved gas were above saturation levels during high stormflows in the lower Columbia River and the Willamette River during 1994. The high concentrations of total dissolved gas in the Columbia River exceeded Oregon and Washington State standards of 110 percent of saturation and were caused by spilling water at the Columbia River dams. Aquatic life in the lower Columbia River Basin was not subjected to low dissolved-oxygen concentrations. Comparison of dissolved-oxygen concentrations in the Willamette River from 1949&ndash;58 to 1972&ndash;94 showed a significant increase in dissolved-oxygen concentrations during the low-streamflow months of summer. Trend tests showed significant (r < 0.05) downward trends from 1973 to 1994 for three constituents at the Columbia River at Warrendale: phosphorus in unfiltered water, total dissolved solids, and specific conductance. These trends may be a consequence of more conservative agricultural practices in the area upstream from Warrendale.

Oregon↗

Effects of megascale eruptions on Earth and Mars

Volcanic features are common on geologically active earthlike planets. Megascale or "super" eruptions involving >1000 Gt of magma have occurred on both Earth and Mars in the geologically recent past, introducing prodigious volumes of ash and volcanic gases into the atmosphere. Here we discuss felsic (explosive) and mafi c (flood lava) supereruptions and their potential atmospheric and environmental effects on both planets. On Earth, felsic supereruptions recur on average about every 100-200,000 years and our present knowledge of the 73.5 ka Toba eruption implies that such events can have the potential to be catastrophic to human civilization. A future eruption of this type may require an unprecedented response from humankind to assure the continuation of civilization as we know it. Mafi c supereruptions have resulted in atmospheric injection of volcanic gases (especially SO 2 ) and may have played a part in punctuating the history of life on Earth. The contrast between the more sustained effects of flood basalt eruptions (decades to centuries) and the near-instantaneous effects of large impacts (months to years) is worthy of more detailed study than has been completed to date. Products of mafi c supereruptions, signifi cantly larger than known from the geologic record on Earth, are well preserved on Mars. The volatile emissions from these eruptions most likely had global dispersal, but the effects may not have been outside what Mars endures even in the absence of volcanic eruptions. This is testament to the extreme variability of the current Martian atmosphere: situations that would be considered catastrophic on Earth are the norm on Mars. ?? 2009 The Geological Society of America.

Special Paper of the Geological Society of America↗

Improving ecological data science with workflow management software

Pressing environmental research questions demand the integration of increasingly diverse and large-scale ecological datasets as well as complex analytical methods, which require specialized tools and resources. Computational training for ecological and evolutionary sciences has become more abundant and accessible over the past decade, but tool development has outpaced the availability of specialized training. Most training for scripted analyses focuses on individual analysis steps in one script rather than creating a scripted pipeline, where modular functions comprise an ecosystem of interdependent steps. Although current computational training creates an excellent starting place, linear styles of scripting can risk becoming labor- and time-intensive and less reproducible by often requiring manual execution. Pipelines, however, can be easily automated or tracked by software to increase efficiency and reduce potential errors. Ecology and evolution would benefit from techniques that reduce these risks by managing analytical pipelines in a modular, readily parallelizable format with clear documentation of dependencies. Workflow management software (WMS) can aid in the reproducibility, intelligibility and computational efficiency of complex pipelines. To date, WMS adoption in ecology and evolutionary research has been slow. We discuss the benefits and challenges of implementing WMS and illustrate its use through a case study with the targets r package to further highlight WMS benefits through workflow automation, dependency tracking and improved clarity for reviewers. Although WMS requires familiarity with function-oriented programming and careful planning for more advanced applications and pipeline sharing, investment in training will enable access to the benefits of WMS and impart transferable computing skills that can facilitate ecological and evolutionary data science at large scales.

Methods in Ecology and Evolution↗

Effects of climate change on plague exposure pathways and resulting disease dynamics

Introduction and Objectives: Sylvatic plague, a zoonotic flea-borne disease, caused by the bacterium Yersinia pestis , is relevant to the Department of Defense (DOD), because prairie dogs and other susceptible rodents are present on military installations in several western states. Arthropod-borne diseases, like plague, are thought to be particularly sensitive to local climate conditions. Expected changes in temperature and humidity over the next several decades will likely increase the geographical expansion of plague outbreaks in wildlife. Through a combination of field and laboratory work, along with data-driven modeling, we evaluated the potential effects of climate change on plague exposure pathways in prairie dogs and associated rodents to provide guidance to DOD partners regarding the potential for future outbreaks. Briefly, our specific objectives were to determine the relation between local climate conditions and the prevalence of plague and other pathogens while assessing the ecological roles of specific rodent hosts and vector species in plague dynamics, evaluate flea intensity on rodent hosts and in burrows in relation to local climate conditions, and develop models to predict the effects of climate change on plague dynamics. Technical Approach: Using data and samples collected during a large field study on the effectiveness of vaccination to manage plague in prairie dogs, we assessed rodent/flea assemblages, pathogen prevalence in fleas, and determined how local climate conditions influence flea development rates and relative abundance. Live animals (prairie dogs and some small rodents) were trapped to collect fleas and other samples on 46 prairie dog plots in 6 western states, many sites near DOD lands. At seven additional locations on a latitudinal gradient, fleas were collected from burrows several times per year to assess seasonality and effects of local climate conditions on flea abundance. These data were then used to develop predictive models that could be used to test specific hypotheses. Results: We determined that flea developmental rates, on-host flea abundance, species composition of the flea community, and burrow temperatures varied across a latitudinal gradient. Rodent and flea community composition and abundance differed geographically and were highly specialized. Flea-switching between prairie dogs and short-lived rodents was rare. Flea development rates, on-host flea abundance, and burrow temperatures increased with increasing ambient temperature. Although relative humidity can affect flea development, burrow humidity was uniformly high (~85%) across sampling sites and seasons. A large increase in the number of fleas found on a prairie dog colony, coupled with a greater number of infested burrows, could have substantial effects on plague dynamics in the western United States as the climate warms. In addition to affecting flea load, climate change may also influence body condition of prairie dogs by reducing the amount of forage. This may result in animals being more tolerant of high flea loads (less engaged in grooming behavior) and more vulnerable to disease.

Arizona, Montana, South Dakota, Texas, Utah, Wyomi↗

Monitoring temporal and spatial variability in sandeel (Ammodytes hexapterus) abundance with pigeon guillemot (Cepphus columba) diets

We evaluated pigeon guillemots (Cepphus columba) as monitors of nearshore fish abundance and community composition during 1995-1999 at Kachemak Bay, Alaska. We studied the composition of chick diets at 10 colonies and simultaneously measured fish abundance around colonies with beach seines and bottom trawls. Sandeels (Ammodytes hexapterus) formed the majority of the diet at one group of colonies. Temporal variability in sandeel abundance explained 74% of inter-annual variability in diet composition at these colonies and 93% of seasonal variability. Diets at other colonies were dominated by demersal fish. Among these colonies, 81% of the variability in the proportion of sandeels in diets was explained by spatial differences in sanded abundance. Pigeon guillemots exhibited a non-linear functional response to sandeel abundance in the area where these fish were most abundant. Temporal and spatial variability in demersal fish abundance was not consistently reflected in diets. Spatial differences in the proportion of different demersal fishes in the diet may have been driven by differences in guillemot prey preference. Prey specialization by individual pigeon guillemots was common, and may operate at the colony level. Inter-annual variability in sandeel abundance may have been tracked more accurately because the magnitude of change (11-fold) was greater than that of demersal fish (three-fold). (C) 2000 International Council for the Exploration of the Sea.

ICES Journal of Marine Science↗

Comparison of a few recording current meters in San Francisco Bay, CA

A team of research scientists in the U.S. Geological Survey uses San Francisco Bay, California, as an outdoor laboratory to study complicated interactions of physical, chemical, and biological processes which take place in an estuarine environment. A current meter comparison study was conceived because of the need to select a suitable current meter to meet field requirements for current measurements in the Bay. The study took place in south San Francisco Bay, California, in the spring of 1977. An instrument tower which was designed to support instruments free from the conventional mooring line motions was constructed and emplaced in south San Francisco Bay. During a period of two months, four types of recording current meters have been used in the tests. The four types were: (1) Aanderaa, (2) tethered shroud-impeller, (3) drag-inclinometer, and (4) electromagnetic current meters. With the exception of the electromagnetic current meter, one of each type was mounted on the instrument tower, and one of each type was deployed on moorings near the instrument tower. In addition, a wind anemometer and a recording tide gauge were also installed on the tower. This paper discusses the characteristics of each instrument and the accuracy that each instrument can provide when used in an estuarine environment. We pay special attention to our experiences in the field operation with respect to handling of the instruments and to our experiences working up the raw data in the post-deployment data analysis.

California↗

Application of FTLOADDS to Simulate Flow, Salinity, and Surface-Water Stage in the Southern Everglades, Florida

The Comprehensive Everglades Restoration Plan requires numerical modeling to achieve a sufficient understanding of coastal freshwater flows, nutrient sources, and the evaluation of management alternatives to restore the ecosystem of southern Florida. Numerical models include a regional water-management model to represent restoration changes to the hydrology of southern Florida and a hydrodynamic model to represent the southern and western offshore waters. The coastal interface between these two systems, however, has complex surface-water/ground-water and freshwater/saltwater interactions and requires a specialized modeling effort. The Flow and Transport in a Linked Overland/Aquifer Density Dependent System (FTLOADDS) code was developed to represent connected surface- and ground-water systems with variable-density flow. The first use of FTLOADDS is the Southern Inland and Coastal Systems (SICS) application to the southeastern part of the Everglades/Florida Bay coastal region. The need to (1) expand the domain of the numerical modeling into most of Everglades National Park and the western coastal area, and (2) better represent the effect of water-delivery control structures, led to the application of the FTLOADDS code to the Tides and Inflows in the Mangroves of the Everglades (TIME) domain. This application allows the model to address a broader range of hydrologic issues and incorporate new code modifications. The surface-water hydrology is of primary interest to water managers, and is the main focus of this study. The coupling to ground water, however, was necessary to accurately represent leakage exchange between the surface water and ground water, which transfers substantial volumes of water and salt. Initial calibration and analysis of the TIME application produced simulated results that compare well statistically with field-measured values. A comparison of TIME simulation results to previous SICS results shows improved capabilities, particularly in the representation of coastal flows. This improvement most likely is due to a more stable numerical representation of the coastal creek outlets. Sensitivity analyses were performed by varying frictional resistance, leakage, barriers to flow, and topography. Changing frictional resistance values in inland areas was shown to improve water-level representation locally, but to have a negligible effect on area-wide values. These changes have only local effects and are not physically based (as are the unchanged values), and thus have limited validity. Sensitivity tests indicate that the overall accuracy of the simulation is diminished if leakage between surface water and ground water is not simulated. The inclusion of a major road as a complete barrier to surface-water flow influenced the local distribution and timing of flow; however, the changes in total flow and individual creekflows were negligible. The model land-surface altitude was lowered by 0.1 meter to determine the sensitivity to topographic variation. This topographic sensitivity test produced mixed results in matching field data. Overall, the representation of stage did not improve definitively. A final calibration utilized the results of the sensitivity analysis to refine the TIME application. To accomplish this calibration, the friction coefficient was reduced at the northern boundary inflow and increased in the southwestern corner of the model, the evapotranspiration function was varied, additional data were used for the ground-water head boundary along the southeast, and the frictional resistance of the primary coastal creek outlet was increased. The calibration improved the match between measured and simulated total flows to Florida Bay and coastal salinities. Agreement also was improved at most of the water-level sites throughout the model domain.

Scientific Investigations Report↗

Annotated bibliography of scientific research on pygmy rabbits published from 1990 to 2020

Integrating recent scientific knowledge into management decisions supports effective natural resource management and can lead to better resource outcomes. However, finding and accessing scientific knowledge can be time consuming and costly. To assist in this process, the U.S. Geological Survey (USGS) is creating a series of annotated bibliographies on topics of management concern for western lands. Previously published reports introduced a methodology for preparing annotated bibliographies to facilitate the integration of recent, peer-reviewed science into resource management decisions. Therefore, relevant text from those efforts is reproduced here to frame the presentation. Sagebrush ecosystems throughout North America face management challenges including habitat loss and fragmentation. Brachylagus idahoensis (pygmy rabbits) are a sagebrush-obligate species that has experienced population declines and range contraction in recent decades. A disjunct population of pygmy rabbits in the Columbia Basin in Washington was listed as federally endangered in 2003. Due to their specialized habitat requirements and low dispersal ability, pygmy rabbits are a high priority for managers throughout their range. We compiled and summarized peer-reviewed journal articles, data products, and formal technical reports (such as U.S. Forest Service General Technical Reports and U.S. Geological Survey Open-File Reports) on pygmy rabbits published between January 1, 1990 and December 31, 2020. We first conducted a structured search of three reference databases and three government databases using the phrase “pygmy rabbit” or “ Brachylagus idahoensis .” We refined the initial list of products by removing (1) duplicates, (2) products not written in English, (3) publications that were not focused on North America, (4) publications that were not published as research, data products, or scientific review articles in peer-reviewed journals or as formal technical reports, and (5) products for which pygmy rabbits were not a research focus or for which the study did not present new data or findings about pygmy rabbits. We summarized each product using a consistent structure (background, objectives, methods, location, findings, and implications) and identified the management topics (for example, captive breeding, habitat characteristics, and population estimates) addressed by each product. We also noted which publications included new publicly available geospatial data. The review process for this annotated bibliography included an initial internal colleague review of each summary, requesting input on each summary from an author of the original publication, and a formal peer review. Our initial searches resulted in 2,285 total products, of which 105 met our criteria for inclusion. Sensitive/rare wildlife, behavior or demographics, site-scale habitat characteristics, habitat selection, and effects distances or spatial scale were the management topics most commonly addressed. The online version of this bibliography, Science for Resource Managers, will be searchable by topic, location, and year; it will include links to each original publication, where available. The studies compiled and summarized here may inform planning and management actions that seek to maintain and restore sagebrush landscapes and associated native species across the western United States.

Open-File Report↗

Evaluation of the effectiveness of an urban stormwater treatment unit in Madison, Wisconsin, 1996-97

An urban stormwater treatment unit was tested as part of an ongoing program of urban nonpoint- pollution research in Madison, Wis. Flow measurements were made and water samples were collected at the inlet to, outlet from, and bypass around the treatment chamber of the device that was installed to collect the runoff from a city maintenance yard. About 90 percent of the runoff water from the 4.3-acre basin was treated by the unit. The remaining 10 percent bypassed the treatment chamber when the flow rate reached approximately 500 gallons per minute. A 24-percent difference between the estimated amount (405 kilograms) and the actual amount (536 kilograms) of retained material in the treatment chamber may be attributed to bedload material that the automatic samplers could not effectively collect. Assuming this, 8 percent of the total mass in the untreated runoff water was estimated as the unsampled bedload. On the basis of water-sample data collected over the course of the study, the suspended solids removal efficiency of treatment chamber was about 25 percent, and the efficiency of the unit as a whole was 21 percent. If the unsampled bedload material was accounted for, the treatment-chamber efficiency was 33 percent. About 19 percent of the total phosphorus was removed from the water that passed through the treatment chamber and 17 percent was removed by the unit as a whole. Total polycyclic aromatic hydrocarbon (PAH) loads were reduced about 39 percent by the treatment chamber and 34 percent by the unit as a whole; these were some of the most effectively removed constituents. Total metals were reduced about 20 to 30 percent by both the treatment chamber and the unit as a whole. In general, dissolved constituents were unaffected by the unit. The material retained in the treatment chamber had high concentrations of lead and PAH and may be subject to special disposal restrictions based on those concentrations and the presence of benzo(a)anthracene. The chemical makeup of the retained material in other similar stormwater treatment units will probably vary depending on the land use and activities in the drainage basin.

Wisconsin↗

Analysis of hydrologic and geochemical time-series data at James Cave, Virginia: Implications for epikarst influence on recharge in Appalachian karst aquifers

The epikarst, which consists of highly weathered rock in the upper vadose zone of exposed karst systems, plays a critical role in determining the hydrologic and geochemical characteristics of recharge to an underlying karst aquifer. This study utilized time series (2007&ndash;2014) of hydrologic and geochemical data of drip water collected within James Cave, Virginia, to examine the influence of epikarst on the quantity and quality of recharge in a mature, doline-dominated karst terrain. Results show a strong seasonality of both hydrology and geochemistry of recharge, which has implications for management of karst aquifers in temperate climatic zones. First, recharge (discharge from the epikarst to the underlying aquifer) reaches a maximum between late winter and early spring, with the onset of the recharge season ranging from as early as December to as late as March during the study period. The timing and duration of the recharge season were found to be a function of precipitation in excess of evapotranspiration on a seasonal time scale. Secondly, seasonally variable residence times for water in the epikarst influence rock-water interaction and, hence, the geochemical characteristics of recharge. Overall, results highlight the strong and complex influence that the epikarst has on karst recharge, which requires long-term and high-resolution data sets to accurately understand and quantify.

Virginia↗

High survival and homing rate of hand-reared wild-strain mallards

In the summer of 1970, 648 (329 males and 319 females) hand-reared wild-strain mallards ( Anas platyrhynchos ) were banded and released at the Arrowwood National Wildlife Refuge, Edmunds, North Dakota. The females were also marked with numbered nasal saddles. Liberation was by the gentle release method, and no special effort was made to isolate or condition the ducklings prior to release. Ducklings were placed in an enclosed pond area at 25 to 45 days of age. Altogether, 627 (97 percent) ducklings reached flight age and dispersed gradually into the wild. All had left the release area by 25 November. First-year band recovery reports indicated that 68 (11 percent) of the birds were shot in 15 states. Their migration pattern was similar to that for immature wild mallards banded in North Dakota in 1970. Eighty-nine (33 percent) of a possible 270 marked females returned to Arrowwood Refuge during 1971. When consideration is given to assumed normal natural mortality and crippling loss, an estimated minimum of 43 percent of the surviving females returned to the release area. Returning birds not observed would raise this figure even higher. This potential homing rate is considerably higher than rates reported for other studies using various strains of mallards. Numerous observations of nests and broods indicated that breeding behavior and nesting success were similar to those of wild mallards in the area. The success of this release is attributed to the inherent capability of hand-reared, wild-strain mallards to revert to their wild behavior, and to the high survival to flight age and first fall migration afforded by the gentle release in a sanctuary area. Indications are that releases of this type under the described conditions can be used to increase the breeding population of mallards in a local area.

North Dakota↗

Determination and analysis of bearing capacity of calcarenites off the Florida Keys

A specially designed instrument was used to determine the in situ bearing capacity at 12 sites in the carbonate sand seaward of the Florida Keys. The resulting data set not only represents unique information in such an environment, but also provided an opportunity to determine whether bearing capacity is controlled by any specific property of the calcarenites, or, conversely, whether the bearing-capacity value could be used as an index of a particular substrate characteristic. The in sltu measurements were made in several subenvironments in order to bracket the variability of sediment properties throughout the area. Samples were collected at each bearing-capacity test site and w .ere analyzed for selected geological and geotechnical properties, including texture, grain shapes, and biological constituents. No relationship was found between bearing capacity and any of the analyzed properties of the sediment. Although many salient characteristics of calcarenites exist, at the stress levels used in this study their influence is either masked owing to the complex interaction of properties that leads to a specific bearing-capacity value or, at least in these sediments, is absent.

Open-File Report↗

A global analysis of traits predicting species sensitivity to habitat fragmentation

Aim Elucidating patterns in species responses to habitat fragmentation is an important focus of ecology and conservation, but studies are often geographically restricted, taxonomically narrow or use indirect measures of species vulnerability. We investigated predictors of species presence after fragmentation using data from studies around the world that included all four terrestrial vertebrate classes, thus allowing direct inter-taxonomic comparison. Location World-wide. Methods We used generalized linear mixed-effect models in an information theoretic framework to assess the factors that explained species presence in remnant habitat patches (3342 patches; 1559 species, mostly birds; and 65,695 records of patch-specific presence–absence). We developed a novel metric of fragmentation sensitivity, defined as the maximum rate of change in probability of presence with changing patch size (‘Peak Change’), to distinguish between general rarity on the landscape and sensitivity to fragmentation per se. Results Size of remnant habitat patches was the most important driver of species presence. Across all classes, habitat specialists, carnivores and larger species had a lower probability of presence, and those effects were substantially modified by interactions. Sensitivity to fragmentation (measured by Peak Change) was influenced primarily by habitat type and specialization, but also by fecundity, life span and body mass. Reptiles were more sensitive than other classes. Grassland species had a lower probability of presence, though sample size was relatively small, but forest and shrubland species were more sensitive. Main conclusions Habitat relationships were more important than life-history characteristics in predicting the effects of fragmentation. Habitat specialization increased sensitivity to fragmentation and interacted with class and habitat type; forest specialists and habitat-specific reptiles were particularly sensitive to fragmentation. Our results suggest that when conservationists are faced with disturbances that could fragment habitat they should pay particular attention to specialists, particularly reptiles. Further, our results highlight that the probability of presence in fragmented landscapes and true sensitivity to fragmentation are predicted by different factors.

Global Ecology and Biogeography↗

Don Swanson: A field volcanology career worth celebrating

Don Swanson has profoundly influenced generations of volcanologists and has made major contributions to our understanding of both silicic and basaltic volcanic systems. He provides an exceptional example of how a gifted scientist can develop entirely new paradigms related to large-scale problems on the basis of decades of study, as exemplified by his work on the emplacement of flood basalts, monitoring and forecasting volcanic eruptions, the development of lava flows and domes, and the explosive nature of Kīlauea Volcano. Don has maintained exceptional productivity even while playing major leadership and management roles in science, and his research is intrinsically geological and rooted in painstaking fieldwork that is both collaborative and interdisciplinary. This volume recognizes Don’s career accomplishments by emphasizing his careful approach to volcanology and highlighting meticulous field observations as the basis for better understanding how volcanoes work.

Special Papers of the Geological Society of Americ↗

Effects of lamprey larvicides on invertebrates in streams

This study was conducted on five streams tributary to Lake Superior and four tributary to Lake Michigan. Samples of the bottom fauna before and after chemical treatment revealed that most groups of aquatic organisms were not adversely affected by exposure to larvicides. The total number of invertebrates was smaller 1 week after treatment than before treatment, increased somewhat by 6 weeks after treatment, and had returned to pretreatment levels 1 year after treatment. Aquatic insects were affected less than other organisms, and invertebrates were more severely affected and recovered more slowly in areas of sand and detritus than in riffle areas.

Special Scientific Report - Fisheries↗