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Wave-driven spatial and temporal variability in sea-floor sediment mobility in the Monterey Bay, Cordell Bank, and Gulf of the Farallones National Marine Sanctuaries

Wind and wave patterns affect many aspects of continental shelves and shorelines geomorphic evolution. Although our understanding of the processes controlling sediment suspension on continental shelves has improved over the past decade, our ability to predict sediment mobility over large spatial and temporal scales remains limited. The deployment of robust operational buoys along the U.S. West Coast in the early 1980s provides large quantities of high-resolution oceanographic and meteorologic data. By 2006, these data sets were long enough to clearly identify long-term trends and compute statistically significant probability estimates of wave and wind behavior during annual and interannual climatic cycles (that is, El Niño and La Niña). Wave-induced sediment mobility on the shelf and upper slope off central California was modeled using synthesized oceanographic and meteorologic data as boundary input for the Delft SWAN model, sea-floor grain-size data provided by the usSEABED database, and regional bathymetry. Differences in waves (heights, periods, and directions) and winds (speeds and directions) between El Niño and La Niña months cause temporal and spatial variations in peak wave-induced bed shear stresses. These variations, in conjunction with spatially heterogeneous unconsolidated sea-floor sedimentary cover, result in predicted sediment mobility widely varying in both time and space. These findings indicate that these factors have significant consequences for both geological and biological processes.

California

Response of aboveground carbon balance to long-term, experimental enhancements in precipitation seasonality is contingent on plant community type in cold-desert rangelands

Semi-arid rangelands are important carbon (C) pools at global scales. However, the degree of net C storage or release in water-limited systems is a function of precipitation amount and timing, as well as plant community composition. In northern latitudes of western North America, C storage in cold-desert ecosystems could increase with boosts in wintertime precipitation, in which climate models predict, due to increases in wintertime soil water storage that enhance summertime productivity. However, there are few long-term, manipulative field-based studies investigating how rangelands will respond to altered precipitation amount or timing. We measured aboveground C pools and fluxes at leaf, soil, and ecosystem scales over a single growing season in plots that had 200 mm of supplemental precipitation added in either winter or summer for the past 21 years, in shrub- and exotic-bunchgrass-dominated garden plots. At our cold-desert site (298 mm precipitation during the study year), we hypothesized that increased winter precipitation would stimulate the aboveground C uptake and storage relative to ambient conditions, especially in plots containing shrubs. Our hypotheses were generally supported: ecosystem C uptake and long-term biomass accumulation were greater in winter- and summer-irrigated plots compared to control plots in both vegetation communities. However, substantial increases in the aboveground biomass occurred only in winter-irrigated plots that contained shrubs. Our findings suggest that increases in winter precipitation will enhance C storage of this widespread ecosystem, and moreso in shrub- compared to grass-dominated communities.

Idaho

Cruise report R/V Surf Surveyor cruise S1-00-CL, mapping the bathymetry of Crater Lake, Oregon

During the Spring of 1999, the US Geological Survey (USGS) Pacific Seafloor Mapping Project (PSMP) was contacted by the US National Park Service Crater Lake National Park (CLNP) to inquire about the plausibility of producing a high-resolution multibeam bathymetric map of Crater Lake. The purpose was to generate a much higher-resolution and more geographically accurate bathymetric map than was produced in 1959, the last time the lake had been surveyed. Scientific interest in various aspects of Crater Lake (aquatic biology, geochemistry, volcanic processes, etc.) has increased during the past decade but the basemap of bathymetry was woefully inadequate. Funds were gathered during the early part of 2000 and the mapping began in late July, 2000. Crater Lake (see fig. 1 in report) is located in south central Oregon (see fig. 2 in report) within the Cascades Range, a chain of volcanoes that stretches from northern California to southern British Columbia. Crater Lake is the collapsed caldera of Mt. Mazama from a climatic eruption about 7700-yr ago (Nelson et al., 1988; Bacon and Lanphere, 1990; Bacon et al., 1997). The floor of Crater Lake has only been mapped three times since the lake was first stumbled upon by gold prospectors in the 1853. The first survey was carried by out by William G. Steel during a joint USGS-US Army expedition under the direction of Maj. Clarence E. Dutton in 1886 (Dutton, 1889). Steel�s mapping survey collected 186 soundings using a Millers lead-line sounding machine (see fig.3 in report). The resulting map (see fig.4 in report) shows only soundings and no attempts were made to generate contours. The second survey, conducted in 1959 by the US Coast and Geodetic Survey, mapped the bathymetry of Crater Lake with an acoustic echo sounder using radar navigation and collected 4000 soundings. The data were contoured by Williams (1961) and Byrne (1962) and the result is a fairly detailed map of the large-scale features of Crater Lake (see fig. 5 in report). The third mapping survey, the one of this report, was a joint USGS-NPS project carried out under a Cooperative Agreement with the Center for Coastal and Ocean Mapping, University of New Hampshire. The 2000 survey used a Kongsberg Simrad EM1002 high-resolution multibeam mapping system owned and operated by C&C Technologies, Inc. of Lafayette, LA.

Oregon

Bats of Mesa Verde National Park, Colorado: Composition, reproduction, and roosting habits

We determined the bat fauna at Mesa Verde National Park (Mesa Verde) in 2006 and 2007, characterized bat elevational distribution and reproduction, and investigated roosting habits of selected species. We captured 1996 bats of 15 species in mist nets set over water during 120 nights of sampling and recorded echolocation calls of an additional species. The bat fauna at Mesa Verde included every species of bat known west of the Great Plains in Colorado, except the little brown bat ( Myotis lucifugus ). Some species showed skewed sex ratios, primarily due to a preponderance of males. Thirteen species of bats reproduced at Mesa Verde. Major differences in spring precipitation between the 2 years of our study were associated with differences in reproductive rates and, in some species, with numbers of juveniles captured. Reduced reproductive effort during spring drought will have a greater impact on bat populations with the forecasted increase in aridity in much of western North America by models of global climate change. We radiotracked 46 bats of 5 species to roosts and describe the first-known maternity colonies of spotted bats ( Euderma maculatum ) in Colorado. All 5 species that we tracked to diurnal roosts relied almost exclusively on rock crevices rather than trees or snags, despite the presence of mature forests at Mesa Verde and the use of trees for roosts in similar forests elsewhere by some of these species. Comparisons with past bat surveys at Mesa Verde and in surrounding areas suggest no dramatic evidence for effects of recent stand-replacing fires on the composition of the bat community.

Colorado

Executive summary. In Second State of the Carbon Cycle Report (SOCCR2): A Sustained Assessment Report

Central to life on Earth, carbon is essential to the molecular makeup of all living things and plays a key role in regulating global climate. To understand carbon’s role in these processes, researchers measure and evaluate carbon stocks and fluxes. A stock is the quantity of carbon contained in a pool or reservoir in the Earth system (e.g., carbon in forest trees), and a flux is the direction and rate of carbon’s transfer between pools (e.g., the movement of carbon from the atmosphere into forest trees during photosynthesis). This document, the Second State of the Carbon Cycle Report (SOCCR2), examines the patterns of carbon stocks and fluxes—collectively called the “carbon cycle.” Emphasis is given to these patterns in specific sectors (e.g., agriculture and energy) and ecosystems (e.g., forests and coastal waters) and to the response of the carbon cycle to human activity. The purpose of SOCCR2 is to assess the current state of the North American carbon cycle and to present recent advances in understanding the factors that influence it. Concentrating on North America—Canada, the United States, and Mexico—the report describes carbon cycling for air, land, inland waters (streams, rivers, lakes, and reservoirs), and coastal waters (see Figure ES.1, p. 23). The questions framing the publication A U.S. Carbon Cycle Science Plan (Michalak et al., 2011) inspired development of three slightly modified questions that guide SOCCR2’s content and focus on North America in a global context: How have natural processes and human actions affected the global carbon cycle on land, in the atmosphere, in the ocean and other aquatic systems, and at ecosystem interfaces (e.g., coastal, wetland, and urban-rural)? How have socioeconomic trends affected atmospheric levels of the primary carbon-containing gases, carbon dioxide (CO2) and methane (CH4)? How have species, ecosystems, natural resources, and human systems been impacted by increasing greenhouse gas (GHG) concentrations, associated changes in climate, and carbon management decisions and practices? SOCCR2 synthesizes the most recent understanding of carbon cycling in North America, assessing new carbon cycle findings and information, the state of knowledge regarding core methods used to study the carbon cycle, and future research needed to best inform carbon management and policy options. Focusing on scientific developments in the decade since the First State of the Carbon Cycle Report (SOCCR1; CCSP 2007), SOCCR2 summarizes the past, current, and projected state of carbon sources, sinks, and natural processes, as well as contributions by human activities. In addition to CO2 and CH4, the report sometimes discusses nitrous oxide (N2O), a GHG associated with activities and processes that affect fluxes of carbon gases.1 SOCCR2 also describes improvements in analysis tools; developments in decision support; and new insights into ecosystem carbon cycling, human causes of changes in the carbon cycle, and social science perspectives on carbon. Since publication of SOCCR1, coordinated research from agencies in the three North American countries has enabled innovative observational, analytical, and modeling capabilities to further advance understanding of the North American carbon cycle (see Appendix D: Carbon Measurement Approaches and Accounting Frameworks, p. 834). Some of the report’s main conclusions, based on the Key Findings of each chapter, are highlighted in Box ES.1, Main Findings of SOCCR2, p. 24.

Report

Water-the Nation's Fundamental Climate Issue A White Paper on the U.S. Geological Survey Role and Capabilities

Of all the potential threats posed by climatic variability and change, those associated with water resources are arguably the most consequential for both society and the environment (Waggoner, 1990). Climatic effects on agriculture, aquatic ecosystems, energy, and industry are strongly influenced by climatic effects on water. Thus, understanding changes in the distribution, quantity and quality of, and demand for water in response to climate variability and change is essential to planning for and adapting to future climatic conditions. A central role of the U.S. Geological Survey (USGS) with respect to climate is to document environmental changes currently underway and to develop improved capabilities to predict future changes. Indeed, a centerpiece of the USGS role is a new Climate Effects Network of monitoring sites. Measuring the climatic effects on water is an essential component of such a network (along with corresponding effects on terrestrial ecosystems). The USGS needs to be unambiguous in communicating with its customers and stakeholders, and with officials at the Department of the Interior, that although modeling future impacts of climate change is important, there is no more critical role for the USGS in climate change science than that of measuring and describing the changes that are currently underway. One of the best statements of that mission comes from a short paper by Ralph Keeling (2008) that describes the inspiration and the challenges faced by David Keeling in operating the all-important Mauna Loa Observatory over a period of more than four decades. Ralph Keeling stated: 'The only way to figure out what is happening to our planet is to measure it, and this means tracking changes decade after decade and poring over the records.' There are three key ideas that are important to the USGS in the above-mentioned sentence. First, to understand what is happening requires measurement. While models are a tool for learning and testing our understanding, they are not a substitute for observations. The second key idea is that measurement needs to be done over a period of many decades. When viewing hydrologic records over time scales of a few years to a few decades, trends commonly appear. However, when viewed in the context of many decades to centuries, these short-term trends are recognized as being part of much longer term oscillations. Thus, while we might want to initiate monitoring of important aspects of our natural resources, the data that will prove to be most useful in the next few years are those records that already have long-term continuity. USGS streamflow and groundwater level data are excellent examples of such long-term records. These measured data span many decades, follow standard protocols for collection and quality assurance, and are stored in a database that provides access to the full period of record. The third point from the Keeling quote relates to the notion of ?poring over the records.? Important trends will not generally jump off the computer screen at us. Thoughtful analyses are required to get past a number of important but confounding influences in the record, such as the role of seasonal variation, changes in water management, or influences of quasi-periodic phenomena, such as El Ni?o-Southern Oscillation (ENSO) or the Pacific Decadal Oscillation (PDO). No organization is better situated to pore over the records than the USGS because USGS scientists know the data, quality-assure the data, understand the factors that influence the data, and have the ancillary information on the watersheds within which the data are collected. To fulfill the USGS role in understanding climatic variability and change, we need to continually improve and strengthen two of our key capabilities: (1) preserving continuity of long-term water data collection and (2) analyzing and interpreting water data to determine how the Nation's water resources are changing. Understanding change in water resources

Circular

Revising supraglacial rock avalanche magnitudes and frequencies in Glacier Bay National Park, Alaska

The frequency of large supraglacial landslides (rock avalanches) occurring in glacial environments is thought to be increasing due to feedbacks with climate warming and permafrost degradation. However, it is difficult to (i) test this; (ii) establish cause–effect relationships; and (iii) determine associated lag-times, due to both temporal and spatial biases in detection rates. Here we applied the Google Earth Engine supraglacial debris input detector (GERALDINE) to Glacier Bay National Park & Preserve (GLBA), Alaska. We find that the number of rock avalanches (RAs) has previously been underestimated by 53 %, with a bias in past detections towards large area RAs. In total, GLBA experienced 69 RAs during 1984–2020, with the highest frequency in the last three years. Of these, 58 % were deposited into the accumulation zone and then sequestered into the ice within two years. RA sources clustered spatially at high elevations and around certain peaks and ridges, predominantly at the boundary of modelled permafrost likelihood. They also clustered temporally, occurring mainly between May and September when air temperatures were high enough to initiate rock-permafrost degradation mechanisms. There was a chronic background debris supply from RAs, with at least one RA occurring in all but nine years; however, a debris rich period during 2012–2016 was driven by three large RAs delivering 44 % of all (1984–2020) debris (by area). Comparable investigation of slope-failures in other remote currently glaciated regions is lacking. If RA rates are similar elsewhere, especially the bias towards emplacement onto/into accumulation zones, their contribution to glacial sediment budgets has been globally underestimated.

Alaska

Stable carbon and oxygen isotope studies of the sediments of Elk Lake, Minnesota

Variations in the ratios of 18 O: 16 O and 13 C: 12 C in calcite throughout the Holocene in Elk Lake, Minnesota, are recorded in three varve-calibrated carbonate cores. Marl in a varved deep-basin (29.6 m) core consists mainly of calcite precipitated from surface waters during the summer and probably provides the least complicated isotope record. Marl in a sublittoral (10 m) core consists of calcite contributed from several inorganic and organic sources and probably is the most complicated of the three isotope records. Calcite from shells of the ostracod Candona ohioensis in the sublittoral core provides a record of shallow-water conditions in Elk Lake for the period between 10,500 and 5500 varve yr. Variations in the 13 C: 12 C ratio of organic carbon deposited in Elk Lake during the Holocene are recorded in organic matter in the deep-basin core. All three oxygen isotope records show that, in general, the 18 O: 16 O ratio in carbonate was enriched in 18 O by several parts per mil during the mid-Holocene relative to the past few thousand years. This pattern of oxygen isotope variation is similar to that observed for carbonate materials from other lakes in the northeastern and north-central United States. Oxygen isotope records from these other lakes also show that the 18 O: 16 O ratio during the early Holocene was lower than during the mid-Holocene, and this pattern has been interpreted as representing a response to a generally warmer and drier climate during the mid-Holocene beginning about 8000 varve yr (the so-called hypsithermal). Ostracod and diatom assemblages from Elk Lake cores show, however, that the lake was colder and more saline than at present until at least 6700 varve yr, with conditions similar to those that exist today in cold prairie lakes of Canada. It may be more appropriate, therefore, to refer to the mid-Holocene in northwestern Minnesota as the “prairie period” rather than the hypsithermal, indicating that the climate was drier, but with no connotation regarding temperature. The oxygen isotope data from the three Elk Lake records for this period are somewhat equivocal. Values of δ 18 O in the marl from the sublittoral core and shells of Candona increase from 10,000 to about 6800 varve yr. However, values of δ 18 O in the marl that accumulated in the deepest part of the lake over the same interval (10,000–6800 varve yr) are more or less constant and enriched in 18 O; this probably reflects the cold, saline prairie-lake conditions predicted from the ostracod and diatom assemblage data. All three oxygen isotope records show decreases in 18 O: 16 O ratios after about 6800 varve yr in response to an increase in temperature and decrease in salinity of the lake. The 13 C: 12 C ratios in carbonates from all three Elk Lake records show a distinct pattern; the ratio increased gradually from 10,000 to 8000 varve yr going into the mid-Holocene prairie period and then decreased gradually coming out of the prairie period between about 5500 and 2500 varve yr. These changes in the 13 C: 12 C ratio could have been related to temperature through its effect on solubility of carbon dioxide; however, this interpretation is not supported by the oxygen isotope data. Another possibility is that changes in the 13 C: 12 C ratio are related to organic productivity that removes 13 C-depleted organic carbon and results in 13 C-enriched surface waters. This interpretation implies that organic productivity was higher in Elk Lake during the mid-Holocene prairie period. Support for the high-productivity, 13 C-enriched surface-water model for the mid-Holocene prairie period in Elk Lake is provided by changes in the 13 C: 12 C ratio of organic carbon in the deep-basin core. These changes parallel almost exactly those in the 13 C: 12 C ratio of carbonate carbon, but are about 2% larger (about 6% as opposed to about 4% for carbonate carbon). The difference of about 2% may represent 13 C depletion due to CO 2 limitation. The percentage of organic carbon in the sediment did not increase during the prairie period because it was diluted by an increased flux of detrital clastic material. The ultimate burial rate of organic carbon increased considerably, however, indicating that organic productivity was higher and/or the degree of preservation increased. Diatom assemblages and plant-pigment concentrations indicate that productivity was higher during the prairie period. Pyrolysis hydrogen and oxygen indices show that the 13 C-enriched organic matter that accumulated during the prairie period was hydrogen rich and oxygen poor relative to organic matter that accumulated before and after. These two indices demonstrate that the organic matter that accumulated during the prairie period was much better preserved.

Minnestoa

Trends in stomatal density and 13C/12C ratios of Pinus flexilis needles during last glacial-interglacial cycle

Measurements of stomatal density and δ 13 C of limber pine ( Pinus flexilis ) needles (leaves) preserved in pack rat middens from the Great Basin reveal shifts in plant physiology and leaf morphology during the last 30,000 years. Sites were selected so as to offset glacial to Holocene climatic differences and thus to isolate the effects of changing atmospheric CO 2 levels. Stomatal density decreased ∼17 percent and δ 13 C decreased ∼1.5 per mil during deglaciation from 15,000 to 12,000 years ago, concomitant with a 30 percent increase in atmospheric CO 2 . Water-use efficiency increased ∼15 percent during deglaciation, if temperature and humidity were held constant and the proxy values for CO 2 and δ 13 C of past atmospheres are accurate. The δ 13 C variations may help constrain hypotheses about the redistribution of carbon between the atmosphere and biosphere during the last glacial-interglacial cycle.

Science

Integrating ecological impacts: Perspectives on drought in the Upper Missouri Headwaters, Montana, United States

Drought is a complex challenge experienced in specific locations through diverse impacts, including ecological impacts. Different professionals involved in drought preparedness and response approach the problem from different points of view, which means they may or may not recognize ecological impacts. This study examines the extent to which interviewees perceive ecological drought in the Upper Missouri Headwaters basin in southwestern Montana. Through semistructured interviews, this research investigates individuals’ perceptions of drought by analyzing how they define drought, how they describe their roles related to drought, and the extent to which they emphasize ecological impacts of drought. Results suggest that while most interviewees have an integrated understanding of drought, they tend to emphasize either ecological or nonecological impacts of drought. This focus was termed their drought orientation. Next, the analysis considers how participants understand exposure to drought. Results indicate that participants view drought as a complex problem driven by both human and natural factors. Last, the paper explores understandings of the available solution space by examining interviewees’ views on adaptive capacity, particularly factors that facilitate or hinder the ability of the Upper Missouri Headwaters region to cope with drought. Participants emphasized that adaptive capacity is both helped and hindered by institutional, cultural, and economic factors, as well as by available information and past resource management practices. Understanding how interviewees perceive the challenges of drought can shape drought preparedness and response, allowing those designing programs to better align their efforts to the perceptions of their target audience.

Montana

Chemical quality of surface water in the Allegheny River basin, Pennsylvania and New York

The Allegheny River is the principal source of water to many industries and to communities in the upper Ohio River Valley. The river and its many tributaries pass through 19 counties in northwestern and western Pennsylvania. The population in these counties exceeds 3 million. A major user of the Allegheny River is the city of Pittsburgh, which has a population greater than The Allegheny River is as basic to the economy of the upper Ohio River Valley in western Pennsylvania as are the rich deposits of bituminous coal, gas, and oil that underlie the drainage basin. During the past 5 years many streams that flow into the Allegheny have been low flowing because of droughts affecting much of the eastern United States. Consequently, the concentration of solutes in some streams has been unusually high because of wastes from coal mines and oil wells. These and other water-quality problems in the Allegheny River drainage basin are affecting the economic future of some areas in western Pennsylvania. Because of environmental factors such as climate, geology, and land and water uses, surface-water quality varies considerably throughout the river basin. The natural quality of headwater streams, for example, is affected by saltwater wastes from petroleum production. One of the streams most affected is Kinzua Creek, which had 2,900 parts per million chloride in a sample taken at Westline on September 2, 1959. However, after such streams as the Conewango, Brokenstraw, Tionesta, Oil, and French Creeks merge with the Allegheny River, the dissolved-solids and chloride concentrations are reduced by dilution. Central segments of the main river receive water from the Clarion River, Redbank, Mahoning, and Crooked Creeks after they have crossed the coal fields of west-central Pennsylvania. At times, therefore, these streams carry coal-mine wastes that are acidic. The Kiskiminetas River, which crosses these coal fields, discharged sulfuric acid into the Allegheny at a rate of 299 tons a day during the 1962 water year (October 1, 1961, to September 30, 1962). Mine water affects the quality of the Allegheny River most noticeably in its lower part where large withdrawals are made by the Pittsburgh Water Company at Aspinwall and the Wilkinsburg-Penn Joint Water Authority at Nadine. At these places raw river water is chemically .treated in modern treatment plants to control such objectionable characteristics as acidity and excessive concentrations of iron and manganese. Dissolved-solids content in the river varies along its entire length. In its upper reaches the water of the Allegheny River is a sodium chloride type, and at low flow, the sodium chloride is more than half the dissolved solids. In its lower reaches the water is a calcium sulfate .type, and at low flow the calcium sulfate is more than half the dissolved solids. In middle segments of the river from Franklin to Kittanning, water is more dilute and of a mixed type. Many small and several larger streams in the upper basin--such as the Conewango, Brokenstraw, Kinzua, Tionesta, and French Creeks--support large populations of game-fish. Even in segments of the Clarion River, Mahoning, and Redbank Creeks, which are at times affected by coal-mine wastes, fish are present. Although different species withstand varying amounts of contaminants in water, the continued presence of the fish indicates that the water is relatively pure and suitable for recreation and many other uses.

Water Supply Paper

Annual primary production: Patterns and mechanisms of change in a nutrient-rich tidal ecosystem

Although nutrient supply often underlies long-term changes in aquatic primary production, other regulatory processes can be important. The Sacramento-San Joaquin River Delta, a complex of tidal waterways forming the landward portion of the San Francisco Estuary, has ample nutrient supplies, enabling us to examine alternate regulatory mechanisms over a 21-yr period. Delta-wide primary productivity was reconstructed from historical water quality data for 1975–1995. Annual primary production averaged 70 g C m −2 , but it varied by over a factor of five among years. At least four processes contributed to this variability: (1) invasion of the clam Potamocorbula amurensis led to a persistent decrease in phytoplankton biomass (chlorophyll a) after 1986; (2) a long-term decline in total suspended solids—probably at least partly because of upstream dam construction—increased water transparency and phytoplankton growth rate; (3) river inflow, reflecting climate variability, affected biomass through fluctuations in flushing and growth rates through fluctuations in total suspended solids; and (4) an additional pathway manifesting as a long-term decline in winter phytoplankton biomass has been identified, but its genesis is uncertain. Overall, the Delta lost 43% in annual primary production during the period. Given the evidence for food limitation of primary consumers, these findings provide a partial explanation for widespread Delta species declines over the past few decades. Turbid nutrient-rich systems such as the Delta may be inherently more variable than other tidal systems because certain compensatory processes are absent. Comparisons among systems, however, can be tenuous because conclusions about the magnitude and mechanisms of variability are dependent on length of data record.

California

Climatic and biotic controls on annual carbon storage in Amazonian ecosystems

1 The role of undisturbed tropical land ecosystems in the global carbon budget is not well understood. It has been suggested that inter-annual climate variability can affect the capacity of these ecosystems to store carbon in the short term. In this paper, we use a transient version of the Terrestrial Ecosystem Model (TEM) to estimate annual carbon storage in undisturbed Amazonian ecosystems during the period 1980-94, and to understand the underlying causes of the year-to-year variations in net carbon storage for this region. 2 We estimate that the total carbon storage in the undisturbed ecosystems of the Amazon Basin in 1980 was 127.6 Pg C, with about 94.3 Pg C in vegetation and 33.3 Pg C in the reactive pool of soil organic carbon. About 83% of the total carbon storage occurred in tropical evergreen forests. Based on our model's results, we estimate that, over the past 15 years, the total carbon storage has increased by 3.1 Pg C (+ 2%), with a 1.9-Pg C (+2%) increase in vegetation carbon and a 1.2-Pg C (+4%) increase in reactive soil organic carbon. The modelled results indicate that the largest relative changes in net carbon storage have occurred in tropical deciduous forests, but that the largest absolute changes in net carbon storage have occurred in the moist and wet forests of the Basin. 3 Our results show that the strength of interannual variations in net carbon storage of undisturbed ecosystems in the Amazon Basin varies from a carbon source of 0.2 Pg C/year to a carbon sink of 0.7 Pg C/year. Precipitation, especially the amount received during the drier months, appears to be a major controller of annual net carbon storage in the Amazon Basin. Our analysis indicates further that changes in precipitation combine with changes in temperature to affect net carbon storage through influencing soil moisture and nutrient availability. 4 On average, our results suggest that the undisturbed Amazonian ecosystems accumulated 0.2 Pg C/year as a result of climate variability and increasing atmospheric CO2 over the study period. This amount is large enough to have compensated for most of the carbon losses associated with tropical deforestation in the Amazon during the same period. 5 Comparisons with empirical data indicate that climate variability and CO2 fertilization explain most of the variation in net carbon storage for the undisturbed ecosystems. Our analyses suggest that assessment of the regional carbon budget in the tropics should be made over at least one cycle of El Nino-Southern Oscillation because of inter-annual climate variability. Our analyses also suggest that proper scaling of the site-specific and sub-annual measurements of carbon fluxes to produce Basin-wide flux estimates must take into account seasonal and spatial variations in net carbon storage.

Global Ecology and Biogeography

Simulated high-latitude soil thermal dynamics during the past four decades

Soil temperature (Ts ) change is a key indicator of the dynamics of permafrost. On seasonal and inter-annual time scales, the variability of Ts determines the active layer depth, which regulates hydrological soil properties and biogeochemical processes. On the multi-decadal scale, increasing T 5 s not only drives permafrost thaw/retreat, but can also trigger and accelerate the decomposition of soil organic carbon. The magnitude of permafrost carbon feedbacks is thus closely linked to the rate of change of soil thermal regimes. In this study, we used nine process-based ecosystem models with permafrost processes, all forced by different observation-based climate forcing during the period 1960–2000, to characterize the warming rate of Ts 10 in permafrost regions. There is a large spread of Ts trends at 20 cm depth across the models, with trend values ranging from 0.010 ± 0.003 to 0.031 ± 0.005 ◦C yr−1 . Most models show smaller increase in Ts with increasing depth. Air temperature (Ta ) and longwave downward radiation (LWDR) are the main drivers of Ts trends, but their relative contributions differ 15 amongst the models. Different trends of LWDR used in the forcing of models can explain 61 % of their differences in Ts trends, while trends of Ta only explain 5 % of the differences in Ts trends. Uncertain climate forcing contributes a larger uncertainty in Ts trends (0.021 ± 0.008 ◦C yr−1 , mean ± SD) than the uncertainty of model structure (0.012 ± 0.001 ◦C yr−1 ), diagnosed from the range of response between different mod- 20 els, normalized to the same forcing. In addition, the loss rate of near-surface permafrost area, defined as total area where the maximum seasonal active layer thickness (ALT) is less than 3 m loss rate is found to be significantly correlated with the magnitude of the trends of Ts at 1 m depth across the models (R = −0.85, P = 0.003), but not with the initial total near-surface permafrost area (R = −0.30, P = 0.438). The sensitivity of the total boreal near-surface permafrost area to T 25 s at 1 m, is estimated to be of −2.80 ± 0.67 million km2 ◦C −1 . Finally, by using two long-term LWDR datasets and relationships between trends of LWDR and Ts across models, we infer an observationconstrained total boreal near-surface permafrost area decrease comprised between 39 ± 14 × 103 and 75 ± 14 × 103 km2 yr−1 from 1960 to 2000. This corresponds to 9– 18 % degradation of the current permafrost area.

Cryosphere Discussions

Environmental drivers of Greater Sage-grouse population trends over 25 years in Idaho, USA

Greater Sage-grouse ( Centrocercus urophasianus ) populations have been in decline for decades across much of the US Intermountain West. However, findings from 25 years of lek counts in Idaho indicate that some populations are stable or even increasing. After accounting for potential biases in past lek count data, we sought to explain the variability in population trends among all 70 lek clusters (i.e., populations) we identified in the state. For each population, we identified lek count troughs, or low-point years, that occurred between the mid-1990s and 2021 and used a regression slope of those abundance low points to quantify each population's trend over the 25-year time span. We related the 70 populations' slopes to climate, fire, topographic, vegetation, and landcover variables. Our analyses revealed that populations with negative trends tend to occur toward the ends of climate gradients (i.e., extremes of occupied habitats) and in locations with more wildfire, agriculture, and riparian landcover. Populations with positive trends generally occur in landscapes toward the middle of the climate gradient, with high amounts of low sagebrush ( Artemisia arbuscula ) landcover and intermediate amounts of riparian and agricultural landcover. Post hoc analysis indicated that the latter two drivers were strongly associated with high raven occupancy rates, which may contribute to the negative sage-grouse population trends we observed in areas with high riparian or agricultural landcover. When modeled separately for different regions however, various region-specific drivers were identified, including tree cover, annual herbaceous cover, and human development. This information can help guide sage-grouse habitat management decisions and set expectations for population recovery, given the diversity of habitats occupied by the species and the cyclic nature of sage-grouse populations.

Idaho

Vegetation history since the last glacial maximum in the Ozark highlands (USA): A new record from Cupola Pond, Missouri

The timing and drivers of vegetation dynamics and formation of no-analog plant communities during the last deglaciation in the unglaciated southeastern US are poorly understood. We present a multi-proxy record spanning the past 19,800 years from Cupola Pond in the Ozarks Mountains, consisting of replicate high-resolution pollen records, 25 AMS radiocarbon dates, and macrofossil, charcoal, and coprophilous spore analyses. Full-glacial Pinus and Picea forests gave way to no-analog vegetation after 17,400 yr BP, followed by development of Quercus -dominated Holocene forests, with late Holocene rises in Pinus and Nyssa . Vegetation transitions, replicated in different cores, are closely linked to hemispheric climate events. Rising Quercus abundances coincide with increasing Northern Hemisphere temperatures and CO 2 at 17,500 yr BP, declining Pinus and Picea at 14,500 yr BP are near the Bølling-Allerød onset, and rapid decline of Fraxinus and rise of Ostrya/Carpinus occur 12,700 yr BP during the Younger Dryas. The Cupola no-analog vegetation record is unusual for its early initiation (17,000 yr BP) and for its three vegetation zones, representing distinct rises of Fraxinus and Ostrya/Carpinus . Sporormiella was absent and sedimentary charcoal abundances were low throughout, suggesting that fire and megaherbivores were not locally important agents of disturbance and turnover. The Cupola record thus highlights the complexity of the late-glacial no-analog communities and suggests direct climatic regulation of their formation and disassembly.

Missouri

A dynamic marine calcium cycle during the past 28 million years

Multiple lines of evidence have shown that the isotopic composition and concentration of calcium in seawater have changed over the past 28 million years. A high-resolution, continuous seawater calcium isotope ratio curve from marine (pelagic) barite reveals distinct features in the evolution of the seawater calcium isotopic ratio suggesting changes in seawater calcium concentrations. The most pronounced increase in the ??44/40Ca value of seawater (of 0.3 per mil) occurred over roughly 4 million years following a period of low values around 13 million years ago. The major change in marine calcium corresponds to a climatic transition and global change in the carbon cycle and suggests a reorganization of the global biogeochemical system.

Science

Experimental translocation of a rare Hawaiian tree reveals disparity between remnant and potential habitat

Translocation is implemented worldwide as a conservation strategy for rare and endangered plant species, yet the factors that influence long-term success remain poorly understood. Remnant wild populations are often used as indicators to model habitat preference and select translocation sites, but such populations may be refugia from past biological or anthropogenic stressors and represent sub-optimal habitat conditions for focal taxa. To test assumptions about habitat preferences of rare species, we conducted a four-year experimental translocation of the Critically Endangered Hawaiian tree, ‘ohe mauka, Polyscias bisattenuata (Araliaceae), planting 3,700 saplings across eleven sites spanning diverse environmental conditions both within and beyond the species’ extant range. We measured seventeen predictor variables at the site and individual plant level in categories of climate, surrounding vegetation, soil chemistry, and genetic provenance. We used linear mixed effects models to assess relative effects of predictors on translocated plant survival, growth, and vigor. The factors which influenced plant performance shifted across ontogeny. The height of surrounding vegetation showed an initial negative relationship with two-year survival, but later showed a positive relationship with four-year growth. Four-year growth demonstrated a strong positive relationship with site annual mean temperature. Successful translocation sites were lower in elevation and warmer in temperature than conditions represented by remnant wild populations. Results demonstrate that basing translocation sites solely on limited extant wild occurrences can lead to suboptimal restoration practices, and experimental outplanting across broad conditions may help identify rare species' contemporary habitat preferences.

Hawaii