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USGS2024

Anaerobic biodegradation of perfluorooctane sulfonate (PFOS) and microbial community composition in soil amended with a dechlorinating culture and chlorinated solvents

Perfluorooctane sulfonate (PFOS), one of the most frequently detected per - and polyfluoroalkyl substances (PFAS) occurring in soil, surface water, and groundwater near sites contaminated with aqueous film-forming foam (AFFF), has proven to be recalcitrant to many destructive remedies, including chemical oxidation. We investigated the potential to utilize microbially mediated reduction (bioreduction) to degrade PFOS and other PFAS through addition of a known dehalogenating culture, WBC-2, to soil obtained from an AFFF-contaminated site. A substantial decrease in total mass of PFOS (soil and water) was observed in microcosms amended with WBC-2 and chlorinated volatile organic compound (cVOC) co-contaminants — 46.4 ± 11.0 % removal of PFOS over the 45-day experiment. In contrast, perfluorooctanoate (PFOA) and 6:2 fluorotelomer sulfonate (6:2 FTS) concentrations did not decrease in the same microcosms. The low or non-detectable concentrations of potential metabolites in full PFAS analyses, including after application of the total oxidizable precursor assay, indicated that defluorination occurred to non-fluorinated compounds or ultrashort-chain PFAS. Nevertheless, additional research on the metabolites and degradation pathways is needed. Population abundances of known dehalorespirers did not change with PFOS removal during the experiment, making their association with PFOS removal unclear. An increased abundance of sulfate reducers in the genus Desulfosporosinus (Firmicutes) and Sulfurospirillum (Campilobacterota) was observed with PFOS removal, most likely linked to initiation of biodegradation by desulfonation. These results have important implications for development of in situ bioremediation methods for PFAS and advancing knowledge of natural attenuation processes.

Science of the Total Environment↗

USGS2002

Behavior of pollutant-degrading microorganisms in aquifers: Predictions for genetically engineered organisms

Bioremediation via environmental introductions of degradative microorganisms requires that the microbes survive in substantial numbers and effect an increase in the rate and extent of pollutant removal. Combined field and microcosm studies were used to assess these abilities for laboratory-grown bacteria. Following introduction into a contaminated aquifer, viable cells of Pseudomonas sp. B13 were present in the contaminant plume for 447 days; die-off was rapid in pristine areas. In aquifer microcosms, survival of B13 and FR120, a genetically engineered derivative of B13 having enhanced catabolic capabilities for substituted aromatics, was comparable to B13 field results; both bacteria degraded target pollutants in microcosms made with aquifer samples from the aerobic zone of the pollutant plume. Results suggest that field studies with nonrecombinant microorganisms may be coupled to laboratory studies with derivative strains to estimate their bioremediative efficacy. Furthermore, laboratory strains of bacteria can survive for extended periods of time in nature and thus may have important bioremediative applications.

Environmental Science & Technology↗

USGS2021

Geological Surveys unite to improve critical mineral security

The global economy is unprepared to meet the exploding demand for critical minerals. These materials, many of which were of little economic interest until recently, are required to fuel a proliferation of technologies and industries that have become vital for social and economic well-being the world over. But supplies of critical minerals are at risk because of their natural scarcity and because of geopolitical issues and trade policies that complicate their distribution, among other factors.

Eos Science News↗

USGS2012

Geographic patterns of fishes and jellyfish in Puget Sound surface waters

We explored patterns of small pelagic fish assemblages and biomass of gelatinous zooplankton (jellyfish) in surface waters across four oceanographic subbasins of greater Puget Sound. Our study is the first to collect data documenting biomass of small pelagic fishes and jellyfish throughout Puget Sound; sampling was conducted opportunistically as part of a juvenile salmon survey of daytime monthly surface trawls at 52 sites during May–August 2003. Biomass composition differed spatially and temporally, but spatial differences were more distinct. Fish dominated in the two northern basins of Puget Sound, whereas jellyfish dominated in the two southern basins. Absolute and relative abundance of jellyfish, hatchery Chinook salmon Oncorhynchus tshawytscha , and chum salmon O. keta decreased with increasing latitude, whereas the absolute and relative abundance of most fish species and the average fish species richness increased with latitude. The abiotic factors with the strongest relationship to biomass composition were latitude, water clarity, and sampling date. Further study is needed to understand the spatial and temporal heterogeneity in the taxonomic composition we observed in Puget Sound surface waters, especially as they relate to natural and anthropogenic influences.

Marine and Coastal Fisheries: Dynamics, Management↗

USGS1968

Herpetic keratoconjunctivitis: Therapy with synthetic double-stranded RNA

A study was undertaken in rabbits to determine how late in the course of keratoconjunctivitis caused by herpes simplex recovery could be effected by an inducer of interferon. Interferon was induced by means of synthetic double-stranded RNA copolymer formed with polynosinic acid: polycytidilic acid RNA. Therapy promotes recovery from severe and fully established keratoconjunctivitis for which treatment was begun as late as 3 days after virus inoculation. No drug toxicity was observed in the therapeutic dose range. These findings further support the proposed role of the interferon mechanism in the natural recovery of already established viral infection. They also suggest the usefulness of interferon inducers in viral infections of man.

Science↗

USGS2010

Individual and colony-specific wintering areas of Pacific northern fulmars (Fulmarus glacialis)

Seabird mortality associated with longline fishing in the eastern Bering Sea occurs mainly from September to May, with northern fulmars (Fulmarus glacialis) comprising the majority (60%) of the bycatch. Along the west coast of North America, winter dieoffs of fulmars may be increasing in frequency and magnitude, the most severe on record being a wreck that peaked in October-November 2003. We deployed satellite transmitters on fulmars from the four main Alaska colonies and tracked individuals for up to 2 years. Fulmars from Hall Island (northern Bering Sea) moved to Russian coastal waters after breeding, while Pribilof Island fulmars (southeastern Bering Sea) remained relatively sedentary yearround. Birds from Chagulak Island (eastern Aleutians) preferred passes between the Aleutian Islands in winter or foraged widely over deep waters of the central Bering Sea and North Pacific. Fulmars from the Semidi Islands (western Gulf of Alaska) migrated directly to waters of the California Current. Individuals from St. George Island (Pribilofs) and Chagulak were consistent in the places that they visited in two successive winters. The Pribilof Islands population is most affected by winter longlining for groundfish, whereas the Semidi Islands colony sustains most of the natural mortality that occurs off Washington, Oregon, and California.

Alaska↗

USGS2022

An introduction to current climate projections and their use in climate impacts research

Using climate projections to evaluate future climate impacts and their associated risks requires a background knowledge of the nature of climate change, use of climate models to develop future projections, and knowledge of how to address climate scenario uncertainty. This chapter provides an overview of climate and climate change, some of the foundational climate science that underlies current climate change assessments, and a brief introduction to climate models and climate scenario uncertainty. Global projections of temperature and precipitation changes from the recent Intergovernmental Panel on Climate Change (IPCC) Sixth Assessment Report (AR6) and a brief comparison to the prior assessment (AR5) are provided. The main sources of uncertainty in these projections include climate variability, climate model differences and treatment of scientific knowledge gaps, and greenhouse gas (GHG) emissions. When projections are downscaled to local resolution, downscaling is an additional source of uncertainty. These uncertainties can be incorporated in assessments of climate impacts by choosing a range of scenarios that directly address the sources of uncertainty. Evaluating the likelihood of a given climate impact on animal health or management strategies requires consideration of the main sources of climate projection uncertainties. Adaptation requires consideration of global-to-regional contexts of climate changes and impacts, but also adaptive capacity.

Book chapter↗

USGS2014

Introduction to selected references on fossil fuels of the central and southern Appalachian basin

The Appalachian basin contains abundant coal and petroleum resources that have been studied and extracted for at least 150 years. In this volume, U.S. Geological Survey (USGS) scientists describe the geologic framework and geochemical character of the fossil-fuel resources of the central and southern Appalachian basin. Separate subchapters (some previously published) contain geologic cross sections; seismic profiles; burial history models; assessments of Carboniferous coalbed methane and Devonian shale gas; distribution information for oil, gas, and coal fields; data on the geochemistry of natural gas and oil; and the fossil-fuel production history of the basin. Although each chapter and subchapter includes references cited, many historical or other important references on Appalachian basin and global fossil-fuel science were omitted because they were not directly applicable to the chapters.

Appalachian basin↗

USGS2021

The green mole, Astromycter prasinatus T. M. Harris, 1825 (Mammalia: Eulipotyphla: Talpidae): An origin story

Thaddeus William Harris described the green mole of Maine, Condylura prasinata (Mammalia: Eulipotyphla: Talpidae), in the July 1825 issue of the Boston Journal of Philosophy and the Arts , and this was considered the original description of the species throughout most of the nineteenth century. In the early twentieth century, taxonomists began instead to cite an earlier notice in the June 1825 issue of the American Journal of Science and Arts . This short article also described the species, but also established a separate genus for it, Astromycter , despite Harris’s indications elsewhere that the species was congeneric with the star-nosed mole, Condylura cristata (Linnaeus, 1758). Moreover, the American Journal of Science and Arts article cited as its source the “ Machias Star ”, indicating the possibility of an even earlier description of the animal. With Astromycter prasinata in synonymy with C. cristata for over a century, little effort has been exerted to determine whether earlier source materials exist or why, within two months, the green mole was allocated to two different genera by its describer. The question is taxonomically relevant today because C. prasinata predates C. cristata nigra ( Smith, 1940), as an available name for north-eastern populations of star-nosed moles. If subspecies of C. cristata are to be recognized, the north-eastern subspecies should correctly bear the name C. cristata prasinata . In fact, authority for both genus- and species-group names for the green mole have been misattributed since 1825. The descriptions of C. prasinata by Thaddeus William Harris in the Boston Journal of Philosophy and the Arts and American Journal of Science and Arts were preceded by at least three published descriptions of A. prasinatus by Thaddeus Mason Harris, his father.

Archives of Natural History↗

USGS2021

A critical gap: In situ measurements of surface-atmosphere interactions from outside earth

This white paper demonstrates five points: (1) The lack of robust measurements of the vertical gradients of natural boundary layers and transport fluxes on other planetary bodies precludes adequate estimation of aeolian and other meteorological processes throughout our Solar System (§1). (2) Thus, there exist critical knowledge gaps within high-priority planetary science questions that motivate the need for in situ aeolian and other meteorological measurements on an extraterrestrial surface (§2). (3) Such measurements would be timely, because they will greatly enhance the utility of existing climate data/models, while also contributing to improved design, safety, and effectiveness of near-future missions (§3). (4) Acquisition of these next-generation measurements from Mars is technologically feasible within the coming decade (including via small spacecraft) (§4, 6) and (5) such measurements would also significantly contribute towards addressing key Mars science questions (§5). Our implicit recommendation is that this type of in situ science be considered in definition of high-priority planetary science questions and prioritization of mission concepts.

Bulletin of the AAS↗

USGS2015

Blackbrush ( Coleogyne ramosissima Torr. ): State of our knowledge and future challenges

Covering 130,000 square miles and a wide range of elevations from desert to alpine in Arizona, Utah, Colorado, and New Mexico, the Colorado Plateau has long fascinated researchers. The Colorado Plateau VI provides readers with a plethora of updates and insights into land conservation and management questions currently surrounding the region. The Colorado Plateau VI’s contributors show how new technologies for monitoring, spatial analysis, restoration, and collaboration improve our understanding, management, and conservation of outcomes at the appropriate landscape scale for the Colorado Plateau. The volume’s chapters fall into five major themes: monitoring as a key tool for addressing management challenges, restoration approaches to improving ecosystem condition and function, collaboration and organizational innovations to achieve conservation and management objectives, landscape-scale approaches to understanding, and managing key species and ecological communities. Focusing on the integration of science into resource management issues over the Colorado Plateau, this volume includes contributions from dozens of leading scholars of the region. The Colorado Plateau VI proves a valuable resource to all interested in the conservation management, natural history, and cultural biological resources of the Colorado Plateau.

Arizona, Colorado, New Mexico, Utah↗

USGS2017

Northern Prairie Wildlife Research Center—Celebrating 50 years of science

The Northern Prairie Wildlife Research Center (NPWRC) celebrated its 50-year anniversary in 2015. This report is written in support of that observance. We document why and how the NPWRC came to be and describe some of its many accomplishments and the influence the Center’s research program has had on natural resource management. The history is organized by major research themes, proceeds somewhat chronologically within each theme, and covers the Center’s first 50 years of research. During that period, Center scientists authored more than 1,700 publications and reports. More than 1,000 seasonal or temporary field personnel, and more than 100 graduate students, contributed to the Center’s success; many went on to have exemplary careers in natural resource management, conservation, and education. The mission of the Northern Prairie Wildlife Research Center today remains true to the original vision: to provide the knowledge needed to understand, conserve, and manage the Nation’s natural resources for current and future generations, with an emphasis on species and ecosystems of the northern Great Plains. The Center’s first 50 years of applied biological research provides a deep scientific foundation on which to address emerging issues for the natural resources in the northern Great Plains and beyond.

Circular↗

USGS2009

Selected achievements, science directions, and new opportunities for the WEBB small watershed research program

Over nearly two decades, the Water, Energy, and Biogeochemical Budgets (WEBB) small watershed research program of the U.S. Geological Survey (USGS) has documented how water and solute fluxes, nutrient, carbon, and mercury dynamics, and weathering and sediment transport respond to natural and humancaused drivers, including climate, climate change, and atmospheric deposition. Together with a continued and increasing focus on the effects of climate change, more investigations are needed that examine ecological effects (e.g., evapotranspiration, nutrient uptake) and responses (e.g., species abundances, biodiversity) that are coupled with the physical and chemical processes historically observed in the WEBB program. Greater use of remote sensing, geographic modeling, and habitat/watershed modeling tools is needed, as is closer integration with the USGS-led National Phenology Network. Better understanding of process and system response times is needed. The analysis and observation of land-use and climate change effects over time should be improved by pooling data obtained by the WEBB program during the last two decades with data obtained earlier and (or) concurrently from other research and monitoring studies conducted at or near the five WEBB watershed sites. These data can be supplemented with historical and paleo-environmental information, such as could be obtained from tree rings and lake cores. Because of the relatively pristine nature and small size of its watersheds, the WEBB program could provide process understanding and basic data to better characterize and quantify ecosystem services and to develop and apply indicators of ecosystem health. In collaboration with other Federal and State watershed research programs, the WEBB program has an opportunity to contribute to tracking the short-term dynamics and long-term evolution of ecosystem services and health indicators at a multiplicity of scales across the landscape.

Conference Paper↗

USGS2015

North Cascades National Park Service Complex

Washington↗

USGS2014

Mount Rainier National Park

Natural Resource Condition Assessments (NRCAs) evaluate current conditions for a subset of natural resources and resource indicators in national parks. NRCAs also report on trends in resource condition (when possible), identify critical data gaps, and characterize a general level of confidence for study findings. The resources and indicators emphasized in a given project depend on the park’s resource setting, status of resource stewardship planning and science in identifying high-priority indicators, and availability of data and expertise to assess current conditions for a variety of potential study resources and indicators. Although the primary objective of NRCAs is to report on current conditions relative to logical forms of reference conditions and values, NRCAs also report on trends, when appropriate (i.e., when the underlying data and methods support such reporting), as well as influences on resource conditions. These influences may include past activities or conditions that provide a helpful context for understanding current conditions and present-day threats and stressors that are best interpreted at park, watershed, or landscape scales (though NRCAs do not report on condition status for land areas and natural resources beyond park boundaries). Intensive cause-andeffect analyses of threats and stressors, and development of detailed treatment options, are outside the scope of NRCAs. It is also important to note that NRCAs do not address resources that lack sufficient data for assessment. For Mount Rainier National Park, this includes most invertebrate species and many other animal species that are subject to significant stressors from climate change and other anthropogenic sources such as air pollutants and recreational use. In addition, we did not include an analysis of the physical hydrology associated with streams (such as riverine landforms, erosion and aggradation which is significant in MORA streams), due to a loss of staff expertise from the USGS-BRD staff conducting the work, and human disturbance landcover issues such as the effects of roads, trails, and other anthropogenic developments due to lack of funds.

Report↗

USGS2016

A new look at liming as an approach to accelerate recovery from acidic deposition effects

Acidic deposition caused by fossil fuel combustion has degraded aquatic and terrestrial ecosystems in North America for over four decades. The only management option other than emissions reductions for combating the effects of acidic deposition has been the application of lime to neutralize acidity after it has been deposited on the landscape. For this reason, liming has been a part of acid rain science from the beginning. However, continued declines in acidic deposition have led to partial recovery of surface water chemistry, and the start of soil recovery. Liming is therefore no longer needed to prevent further damage, so the question becomes whether liming would be useful for accelerating recovery of systems where improvement has lagged. As more is learned about recovering ecosystems, it has become clear that recovery rates vary with watershed characteristics and among ecosystem components. Lakes appear to show the strongest recovery, but recovery in streams is sluggish and recovery of soils appears to be in the early stages. The method in which lime is applied is therefore critical in achieving the goal of accelerated recovery. Application of lime to a watershed provides the advantage of increasing Ca availability and reducing or preventing mobilization of toxic Al, an outcome that is beneficial to both terrestrial and aquatic ecosystems. However, the goal should not be complete neutralization of soil acidity, which is naturally produced. Liming of naturally acidic areas such as wetlands should also be avoided to prevent damage to indigenous species that rely on an acidic environment.

Science of the Total Environment↗

USGS2024

The 3D Elevation Program—Supporting Florida's economy

Introduction Florida has the longest coastline of any State in the contiguous United States, and its coastal resources are one of the main drivers of its economic growth. High-quality elevation data are beneficial for use in emergency management, especially for hurricane response, recovery, and mitigation, as well as for coastal zone management, flood risk management, infrastructure planning, agriculture, forestry, and natural resources management. Having regional or statewide elevation data coverage that was collected at about the same time allows for improved results from in-depth modeling and more meaningful analysis to support the State’s Chief Science Officer, Geographic Information Officer, State agencies, water management districts, and local governments that will use these data for decision making. Critical applications that meet the State’s management needs depend on light detection and ranging (lidar) data that provide a highly detailed three-dimensional (3D) model of the Earth’s surface and aboveground features.

Florida↗

USGS2013

Louisiana Barrier Island Comprehensive Monitoring (BICM) Program Summary Report: Data and Analyses 2006 through 2010

The Barrier Island Comprehensive Monitoring (BICM) program was implemented under the Louisiana Coastal Area Science and Technology (LCA S&T) office as a component of the System Wide Assessment and Monitoring (SWAMP) program. The BICM project was developed by the State of Louisiana (Coastal Protection Restoration Authority [CPRA], formerly Department of Natural Resources [DNR]) to complement other Louisiana coastal monitoring programs such as the Coastwide Reference Monitoring System-Wetlands (CRMS-Wetlands) and was a collaborative research effort by CPRA, University of New Orleans (UNO), and the U.S. Geological Survey (USGS). The goal of the BICM program was to provide long-term data on the barrier islands of Louisiana that could be used to plan, design, evaluate, and maintain current and future barrier-island restoration projects. The BICM program used both historical and newly acquired (2006 to 2010) data to assess and monitor changes in the aerial and subaqueous extent of islands, habitat types, sediment texture and geotechnical properties, environmental processes, and vegetation composition. BICM datasets included aerial still and video photography (multiple time series) for shoreline positions, habitat mapping, and land loss; light detection and ranging (lidar) surveys for topographic elevations; single-beam and swath bathymetry; and sediment grab samples. Products produced using BICM data and analyses included (but were not limited to) storm-impact assessments, rate of shoreline and bathymetric change, shoreline-erosion and accretion maps, high-resolution elevation maps, coastal-shoreline and barrier-island habitat-classification maps, and coastal surficial-sediment characterization maps. Discussions in this report summarize the extensive data-collection efforts and present brief interpretive analyses for four coastal Louisiana geographic regions. In addition, several coastal-wide and topical themes were selected that integrate the data and analyses within a broader coastal context: (1) barrier-shoreline evolution driven by rapid relative sea-level rise (RSLR), (2) hurricane impacts to the Chandeleur Islands and likelihood of island recovery, (3) impact of tropical storms on barrier shorelines, (4) Barataria Bay tidal-inlet management, and (5) habitat changes related to RSLR. The final theme addresses potential future goals of the BICM program, including rotational annual to semi-decadal monitoring, proposed new-data collection, how to incorporate technological advances with previous data-collection and monitoring protocols, and standardizing methods and quality-control assessments for continued coastal monitoring and restoration.

Louisiana↗