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Response of microbial community composition and function to soil climate change

Soil microbial communities mediate critical ecosystem carbon and nutrient cycles. How microbial communities will respond to changes in vegetation and climate, however, are not well understood. We reciprocally transplanted soil cores from under oak canopies and adjacent open grasslands in a California oak-grassland ecosystem to determine how microbial communities respond to changes in the soil environment and the potential consequences for the cycling of carbon. Every 3 months for up to 2 years, we monitored microbial community composition using phospholipid fatty acid analysis (PLFA), microbial biomass, respiration rates, microbial enzyme activities, and the activity of microbial groups by quantifying 13C uptake from a universal substrate (pyruvate) into PLFA biomarkers. Soil in the open grassland experienced higher maximum temperatures and lower soil water content than soil under the oak canopies. Soil microbial communities in soil under oak canopies were more sensitive to environmental change than those in adjacent soil from the open grassland. Oak canopy soil communities changed rapidly when cores were transplanted into the open grassland soil environment, but grassland soil communities did not change when transplanted into the oak canopy environment. Similarly, microbial biomass, enzyme activities, and microbial respiration decreased when microbial communities were transplanted from the oak canopy soils to the grassland environment, but not when the grassland communities were transplanted to the oak canopy environment. These data support the hypothesis that microbial community composition and function is altered when microbes are exposed to new extremes in environmental conditions; that is, environmental conditions outside of their "life history" envelopes. ?? 2006 Springer Science+Business Media, Inc.

Microbial Ecology↗

Effects of historical climate change, habitat connectivity, and vicariance on genetic structure and diversity across the range of the Red Tree Vole (Phenacomys longicaudus) in the Pacific Northwest United States

Phylogeographical analyses conducted in the Pacific Northwestern United States have often revealed concordant patterns of genetic diversity among taxa. These studies demonstrate distinct North/South genetic discontinuities that have been attributed to Pleistocene glaciation. We examined phylogeographical patterns of red tree voles (Phenacomys longicaudus) in western Oregon by analysing mitochondrial control region sequences for 169 individuals from 18 areas across the species' range. Cytochrome b sequences were also analysed from a subset of our samples to confirm the presence of major haplotype groups. Phylogenetic network analyses suggested the presence of two haplotype groups corresponding to northern and southern regions of P. longicaudus' range. Spatial genetic analyses (samova and Genetic Landscape Shapes) of control region sequences demonstrated a primary genetic discontinuity separating northern and southern sampling areas, while a secondary discontinuity separated northern sampling areas into eastern and western groups divided by the Willamette Valley. The North/South discontinuity likely corresponds to a region of secondary contact between lineages rather than an overt barrier. Although the Cordilleran ice sheet (maximum a??12 000 years ago) did not move southward to directly affect the region occupied by P. longicaudus, climate change during glaciation fragmented the forest landscape that it inhabits. Signatures of historical fragmentation were reflected by positive associations between latitude and variables such as Tajima's D and patterns associated with location-specific alleles. Genetic distances between southern sampling areas were smaller, suggesting that forest fragmentation was reduced in southern vs. northern regions.

Molecular Ecology↗

Erosion rates at the Mars Exploration Rover landing sites and long-term climate change on Mars

Erosion rates derived from the Gusev cratered plains and the erosion of weak sulfates by saltating sand at Meridiani Planum are so slow that they argue that the present dry and desiccating environment has persisted since the Early Hesperian. In contrast, sedimentary rocks at Meridiani formed in the presence of groundwater and occasional surface water, and many Columbia Hills rocks at Gusev underwent aqueous alteration during the Late Noachian, approximately coeval with a wide variety of geomorphic indicators that indicate a wetter and likely warmer environment. Two-toned rocks, elevated ventifacts, and perched and undercut rocks indicate localized deflation of the Gusev plains and deposition of an equivalent amount of sediment into craters to form hollows, suggesting average erosion rates of ???0.03 nm/yr. Erosion of Hesperian craters, modification of Late Amazonian craters, and the concentration of hematite concretions in the soils of Meridiani yield slightly higher average erosion rates of 1-10 nm/yr in the Amazonian. These erosion rates are 2-5 orders of magnitude lower than the slowest continental denudation rates on Earth, indicating that liquid water was not an active erosional agent. Erosion rates for Meridiani just before deposition of the sulfate-rich sediments and other eroded Noachian areas are comparable with slow denudation rates on Earth that are dominated by liquid water. Available data suggest the climate change at the landing sites from wet and likely warm to dry and desiccating occurred sometime between the Late Noachian and the beginning of the Late Hesperian (3.7-3.5 Ga). Copyright 2006 by the American Geophysical Union.

Journal of Geophysical Research E: Planets↗

Quantifying climate change mitigation potential in Great Plains wetlands for three greenhouse gas emission scenarios

We examined opportunities for avoided loss of wetland carbon stocks in the Great Plains of the United States in the context of future agricultural expansion through analysis of land-use land-cover (LULC) change scenarios, baseline carbon datasets and biogeochemical model outputs. A wetland map that classifies wetlands according to carbon pools was created to describe future patterns of carbon loss and potential carbon savings. Wetland avoided loss scenarios, superimposed upon LULC change scenarios, quantified carbon stocks preserved under criteria of carbon densities or land value plus cropland suitability. Up to 3420 km 2 of wetlands may be lost in the region by 2050, mainly due to conversion of herbaceous wetlands in the Temperate Prairies where soil organic carbon (SOC) is highest. SOC loss would be approximately 0.20 ± 0.15 megagrams of carbon per hectare per year (MgC ha −1 yr −1 ), depending upon tillage practices on converted wetlands, and total ecosystem carbon loss in woody wetlands would be approximately 0.81 ± 0.41 MgC ha −1 yr −1 , based on biogeochemical model results. Among wetlands vulnerable to conversion, wetlands in the Northern Glaciated Plains and Lake Agassiz Plains ecoregions exhibit very high mean SOC and on average, relatively low land values, potentially creating economically competitive opportunities for avoided carbon loss. This mitigation scenarios approach may be adapted by managers using their own preferred criteria to select sites that best meet their objectives. Results can help prioritize field-based assessments, where site-level investigations of carbon stocks, land value, and consideration of local priorities for climate change mitigation programs are needed.

Great Plains↗

Debris-flow entrainment modelling under climate change: Considering antecedent moisture conditions along the flow path

Debris-flow volumes can increase along their flow path by entraining sediment stored in the channel bed and banks, thus also increasing hazard potential. Theoretical considerations, laboratory experiments and field investigations all indicate that the saturation conditions of the sediment along the flow path can greatly influence the amount of sediment entrained. However, this process is usually not considered for practical applications. This study aims to close this gap by combining runout and hydrological models into a predictive framework that is calibrated and tested using unique observations of sediment erosion and debris-flow properties available at a Swiss debris-flow observation station (Illgraben). To this end, hourly water input to the erodible channel is predicted using a simple, process-based hydrological model, and the resulting water saturation level in the upper sediment layer of the channel is modelled based on a Hortonian infiltration concept. Debris-flow entrainment is then predicted using the RAMMS debris-flow runout model. We find a strong correlation between the modelled saturation level of the sediment on the flow path and the channel-bed erodibility for single-surge debris-flow events with distinct fronts, indicating that the modelled water content is a good predictor for erosion simulated in RAMMS. Debris-flow properties with more complex flow behaviour (e.g., multiple surges or roll waves) are not as well predicted using this procedure, indicating that more physically complete models are necessary. Finally, we demonstrate how this modelling framework can be used for climate change impact assessment and show that earlier snowmelt may shift the peak of the debris-flow season to earlier in the year. Our novel modelling framework provides a plausible approach to reproduce saturation-dependent entrainment and thus better constrain event volumes for current and future hazard assessment.

Illgraben basin↗

Abrupt climate change and collapse of deep-sea ecosystems

We investigated the deep-sea fossil record of benthic ostracodes during periods of rapid climate and oceanographic change over the past 20,000 years in a core from intermediate depth in the northwestern Atlantic. Results show that deep-sea benthic community "collapses" occur with faunal turnover of up to 50% during major climatically driven oceanographic changes. Species diversity as measured by the Shannon-Wiener index falls from 3 to as low as 1.6 during these events. Major disruptions in the benthic communities commenced with Heinrich Event 1, the Inter-Aller??d Cold Period (IACP: 13.1 ka), the Younger Dryas (YD: 12.9-11.5 ka), and several Holocene Bond events when changes in deep-water circulation occurred. The largest collapse is associated with the YD/IACP and is characterized by an abrupt two-step decrease in both the upper North Atlantic Deep Water assemblage and species diversity at 13.1 ka and at 12.2 ka. The ostracode fauna at this site did not fully recover until ???8 ka, with the establishment of Labrador Sea Water ventilation. Ecologically opportunistic slope species prospered during this community collapse. Other abrupt community collapses during the past 20 ka generally correspond to millennial climate events. These results indicate that deep-sea ecosystems are not immune to the effects of rapid climate changes occurring over centuries or less. ?? 2008 by The National Academy of Sciences of the USA.

Proceedings of the National Academy of Sciences of↗

Chemical and biotic characteristics of prairie lakes and large wetlands in south-central North Dakota—Effects of a changing climate

The climate of the prairie pothole region of North America is known for variability that results in significant interannual changes in water depths and volumes of prairie lakes and wetlands; however, beginning in July 1993, the climate of the region shifted to an extended period of increased precipitation that has likely been unequaled in the preceding 500 years. Associated changing water volumes also affect water chemical characteristics, with potential effects on fish and wildlife populations. To explore the effect of changing climate patterns, in 2012 and 2013, the U.S. Geological Survey revisited 167 of 178 prairie lakes and large wetlands of south-central North Dakota that were originally sampled in the mid-1960s to mid-1970s. During the earlier sampling period, these lakes and wetlands displayed a great range of chemical characteristics (for example, specific conductance ranged from 365 microsiemens per centimeter at 25 degrees Celsius to 70,300 microsiemens per centimeter at 25 degrees Celsius); however, increased water volumes have resulted in greatly reduced variation among lakes and wetlands and a more homogeneous set of chemical conditions defined by pH, specific conductance, and concentrations of major cations and anions. High concentrations of dissolved solids previously limited fish occurrence in many of the lakes and wetlands sampled; however, freshening of these lakes and large wetlands has allowed fish to populate and flourish where they were previously absent. Conversely, the freshening of previously saline lakes and wetlands has resulted in concurrent shifts away from invertebrate species adapted to live in these highly saline environments. A shift in the regional climate has changed a highly diverse landscape of wetlands (fresh to highly saline) to a markedly more homogeneous landscape that has reshaped the fish and wildlife communities of this ecologically and economically important region.

North Dakota↗

Effects of simultaneous climate change and geomorphic evolution on thermal characteristics of a shallow Alaskan lake

We used a hydrodynamics model to assess the consequences of climate warming and contemporary geomorphic evolution for thermal conditions in a large, shallow Alaskan lake. We evaluated the effects of both known climate and landscape change, including rapid outlet erosion and migration of the principal inlet stream, over the past 50 yr as well as future scenarios of geomorphic restoration. Compared to effects of air temperature during the past 50 yr, lake thermal properties showed little sensitivity to substantial (~60%) loss of lake volume, as the lake maximum depth declined from 6 m to 4 m driven by outlet erosion. The direction and magnitude of future lake thermal responses will be driven largely by the extent of inlet stream migration when it occurs simultaneously with outlet erosion. Maintaining connectivity with inlet streams had substantial effects on buffering lake thermal responses to warming climate. Failing to account for changing rates and types of geomorphic processes under continuing climate change may misidentify the primary drivers of lake thermal responses and reduce our ability to understand the consequences for aquatic organisms.

Alaska↗

Changes in dissolved organic material determine exposure of stream benthic communities to UV-B radiation and heavy metals: Implications for climate change

Changes in regional climate in the Rocky Mountains over the next 100 years are expected to have significant effects on biogeochemical cycles and hydrological processes. In particular, decreased discharge and lower stream depth during summer when ultraviolet radiation (UVR) is the highest combined with greater photo-oxidation of dissolved organic materials (DOM) will significantly increase exposure of benthic communities to UVR. Communities in many Rocky Mountain streams are simultaneously exposed to elevated metals from abandoned mines, the toxicity and bioavailability of which are also determined by DOM. We integrated field surveys of 19 streams (21 sites) along a gradient of metal contamination with microcosm and field experiments conducted in Colorado, USA, and New Zealand to investigate the influence of DOM on bioavailability of heavy metals and exposure of benthic communities to UVR. Spatial and seasonal variation in DOM were closely related to stream discharge and significantly influenced heavy metal uptake in benthic organisms. Qualitative and quantitative changes in DOM resulting from exposure to sunlight increased UV-B (290-320nm) penetration and toxicity of heavy metals. Results of microcosm experiments showed that benthic communities from a metal-polluted stream were tolerant of metals, but were more sensitive to UV-B than communities from a reference stream. We speculate that the greater sensitivity of these communities to UV-B resulted from costs associated with metal tolerance. Exclusion of UVR from 12 separate Colorado streams and from outdoor stream microcosms in New Zealand increased the abundance of benthic organisms (mayflies, stoneflies, and caddisflies) by 18% and 54%, respectively. Our findings demonstrate the importance of considering changes in regional climate and UV-B exposure when assessing the effects of local anthropogenic stressors. ?? Journal compilation ?? 2008 Blackwell Publishing.

Global Change Biology↗

Landscape-scale forest restoration decreases vulnerability to drought mortality under climate change in southwest USA ponderosa forest

Drought-induced tree mortality is predicted to increase in dry forests across the western USA as future projections show hotter, drier climates potentially resulting in large-scale tree die-offs, changes in species composition, and loss of forest ecosystem services, including carbon storage. While some studies have found that forest stands with greater basal areas (BA) have higher drought mortality, many have not evaluated the extent to which forest structure, either overly dense forests due to fire suppression or forests restored to lower densities, interacts with drought mortality. The southwestern USA is particularly susceptible to tree mortality due to the predicted increases in temperature, drier soils, and forests with high density. Our objective was to evaluate how ponderosa pine mortality is expected to be influenced by the Four Forests Restoration Initiative, a large-scale forest restoration effort ongoing in northern Arizona, USA, that will reduce stand BA by approximately 40%. Specifically, we modeled drought mortality in three time periods, one contemporary (1970-2010), and two future (2020-2059 and 2060-2099) under three restoration scenarios: no thinning, 4FRI thinning, and a BA reduction beyond the 4FRI plan (4FRI-intensive). We estimated mortality using 11 climate models under two emissions scenarios. Without thinning, our model predicted that by mid-century (2020-2059), changes in climate could increase annual ponderosa pine mortality rates by 45-57% over contemporary rates. However, with thinning, mid-century mortality was predicted to remain near or below contemporary rates and these rates are 31-35% (4FRI) and 46-51% (4FRI-intensive) less than the mid-century scenarios without thinning. Our study shows that while climate change is likely to increase tree mortality rates, large-scale forest restoration projects, such as 4FRI, have the potential to ameliorate the effects of climate change and keep mortality rates near contemporary levels for decades.

Arizona↗

Speleothem evidence for Late Miocene extreme Arctic amplification – An analogue for near-future anthropogenic climate change?

The Miocene provides an excellent climatic analogue for near-future runaway anthropogenic warming, with atmospheric CO 2 concentrations and global average temperatures similar to those projected for the coming century under extreme-emissions scenarios. However, the magnitude of Miocene Arctic warming remains unclear due to the scarcity of reliable proxy data. Here we use stable oxygen isotope and trace element analyses, alongside clumped isotope and fluid inclusion palaeothermometry of speleothems to reconstruct palaeo-environmental conditions near the Siberian Arctic coast during the Tortonian (8.68 ± 0.09 Ma ). Stable oxygen isotope records suggest warmer-than-present temperatures. This is supported by temperature estimates based on clumped isotopes and fluid inclusions giving mean annual air temperatures between + 6.6 and + 11.1 °C , compared with − 12.3 °C today. Trace elements records reveal a highly seasonal hydrological environment. Our estimate of > 18 °C of Arctic warming supports the wider consensus of a warmer-than-present Miocene and provides a rare palaeo-analogue for future Arctic amplification under high-emissions scenarios. The reconstructed increase in mean surface temperature far exceeds temperatures projected in fully coupled global climate models, even under extreme-emissions scenarios. Given that climate models have consistently underestimated the extent of recent Arctic amplification, our proxy data suggest Arctic warming may exceed current projections.

Lena River delta↗

Potential effects of climate change on Appalachian stoneflies ( Remenus kirchneri , Acroneuria kosztarabi , and Tallaperla lobata )

Plecoptera (stoneflies) are an order of insects where most species rely on clean, fast-moving freshwater for an aquatic larval stage followed by a short terrestrial adult stage. Most species of Plecoptera seem to be restricted to specific stream types and thermal regimes. Climate-driven changes are likely to alter stream temperatures and flow, resulting in physiological stress, reduced reproductive success, and possibly latitudinal or elevational distribution shifts. This report focuses on climate projections and the resulting ecological effect for three species of Appalachian stoneflies: Remenus kirchneri , Acroneuria kosztarabi , and Tallaperla lobata . Although species-specific information is sparse for these three species, climate studies for other Plecoptera spp. are applicable. In the focal region, temperature is increasing and likely leading to increased stream temperatures. In response, Plecoptera spp. will likely experience physiological stress from increasing metabolic rates and energy demands concurrent with changing food quality and access. Warming temperatures and decreased larval energy stores are likely to contribute to lower adult body size and longevity, thus decreasing reproductive success. Whereas projected changes to precipitation and runoff are less certain, under drier future climate projections, decreased streamflow may further stress larval Plecoptera. Remenus kirchneri , A. kosztarabi , and T. lobata will likely retain stable permanent stream habitats for the analyzed future (2006–99). Changing climate is of particular concern for mountaintop species R. kirchneri and T. lobata because they may be unable to track shifts in suitable climate and habitat.

North Carolina, Tennessee, Virginia↗

Non-native and native organisms moving into high elevation and high latitude ecosystems in an era of climate change: new challenges for ecology and conservation

Cold environments at high elevation and high latitude are often viewed as resistant to biological invasions. However, climate warming, land use change and associated increased connectivity all increase the risk of biological invasions in these environments. Here we present a summary of the key discussions of the workshop ‘Biosecurity in Mountains and Northern Ecosystems: Current Status and Future Challenges’ (Flen, Sweden, 1–3 June 2015). The aims of the workshop were to (1) increase awareness about the growing importance of species expansion—both non-native and native—at high elevation and high latitude with climate change, (2) review existing knowledge about invasion risks in these areas, and (3) encourage more research on how species will move and interact in cold environments, the consequences for biodiversity, and animal and human health and wellbeing. The diversity of potential and actual invaders reported at the workshop and the likely interactions between them create major challenges for managers of cold environments. However, since these cold environments have experienced fewer invasions when compared with many warmer, more populated environments, prevention has a real chance of success, especially if it is coupled with prioritisation schemes for targeting invaders likely to have greatest impact. Communication and co-operation between cold environment regions will facilitate rapid response, and maximise the use of limited research and management resources.

Biological Invasions↗

Flow regime alterations under changing climate in two river basins: Implications for freshwater ecosystems

We examined impacts of future climate scenarios on flow regimes and how predicted changes might affect river ecosystems. We examined two case studies: Cle Elum River, Washington, and Chattahoochee-Apalachicola River Basin, Georgia and Florida. These rivers had available downscaled global circulation model (GCM) data and allowed us to analyse the effects of future climate scenarios on rivers with (1) different hydrographs, (2) high future water demands, and (3) a river-floodplain system. We compared observed flow regimes to those predicted under future climate scenarios to describe the extent and type of changes predicted to occur. Daily stream flow under future climate scenarios was created by either statistically downscaling GCMs (Cle Elum) or creating a regression model between climatological parameters predicted from GCMs and stream flow (Chattahoochee-Apalachicola). Flow regimes were examined for changes from current conditions with respect to ecologically relevant features including the magnitude and timing of minimum and maximum flows. The Cle Elum's hydrograph under future climate scenarios showed a dramatic shift in the timing of peak flows and lower low flow of a longer duration. These changes could mean higher summer water temperatures, lower summer dissolved oxygen, and reduced survival of larval fishes. The Chattahoochee-Apalachicola basin is heavily impacted by dams and water withdrawals for human consumption; therefore, we made comparisons between pre-large dam conditions, current conditions, current conditions with future demand, and future climate scenarios with future demand to separate climate change effects and other anthropogenic impacts. Dam construction, future climate, and future demand decreased the flow variability of the river. In addition, minimum flows were lower under future climate scenarios. These changes could decrease the connectivity of the channel and the floodplain, decrease habitat availability, and potentially lower the ability of the river to assimilate wastewater treatment plant effluent. Our study illustrates the types of changes that river ecosystems might experience under future climates. Copyright ?? 2005 John Wiley & Sons, Ltd.

River Research and Applications↗

Potential effects of climate change on freshwater ecosystems of the New England/Mid-Atlantic Region

Numerous freshwater ecosystems, dense concentrations of humans along the eastern seaboard, extensive forests and a history of intensive land use distinguish the New England/Mid-Atlantic Region. Human population densities are forecast to increase in portions of the region at the same time that climate is expected to be changing. Consequently, the effects of humans and climatic change are likely to affect freshwater ecosystems within the region interactively. The general climate, at present, is humid continental, and the region receives abundant precipitation. Climatic projections for a 2 × CO 2 atmosphere, however, suggest warmer and drier conditions for much of this region. Annual temperature increases ranging from 3–5°C are projected, with the greatest increases occurring in autumn or winter. According to a water balance model, the projected increase in temperature will result in greater rates of evaporation and evapotranspiration. This could cause a 21 and 31% reduction in annual stream flow in the southern and northern sections of the region, respectively, with greatest reductions occurring in autumn and winter. The amount and duration of snow cover is also projected to decrease across the region, and summer convective thunderstorms are likely to decrease in frequency but increase in intensity.

Hydrological Processes↗

Climate change in the federated states of Micronesia: Food and water security, climate risk management, and adaptive strategies

This is a report of findings following research and a three-week field assessment (April 2009) of the Federated States of Micronesia (FSM) in response to nation-wide marine inundation by extreme tides (December 2007, September 2008, December 2008).3 The study was conducted at the request of the US Department of Agriculture Forest Service and the state and federal governments of FSM.

Report↗

Projection of wave conditions in response to climate change: A community approach to global and regional wave downscaling

Future changes in wind-wave climate have broad implications for coastal geomorphology and management. General circulation models (GCM) are now routinely used for assessing climatological parameters, but generally do not provide parameterizations of ocean wind-waves. To fill this information gap, a growing number of studies use GCM outputs to independently downscale wave conditions to global and regional levels. To consolidate these efforts and provide a robust picture of projected changes, we present strategies from the community-derived multi-model ensemble of wave climate projections (COWCLIP) and an overview of regional contributions. Results and strategies from one contributing regional study concerning changes along the eastern North Pacific coast are presented.

Conference Paper↗