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Drivers of change in estuarine-coastal ecosystems: Discoveries from four decades of study in San Francisco Bay

Poised at the interface of rivers, ocean, atmosphere and dense human settlement, estuaries are driven by a large array of natural and anthropogenic forces. San Francisco Bay exemplifies the fast-paced change occurring in many of the world's estuaries, bays and inland seas in response to these diverse forces. We use observations from this particularly well-studied estuary to illustrate responses to six drivers that are common agents of change where land and sea meet: water consumption and diversion; human modification of sediment supply; introduction of non-native species; sewage input; environmental policy; and climate shifts. In San Francisco Bay, responses to these drivers include, respectively, shifts in the timing and extent of freshwater inflow and salinity intrusion; decreasing turbidity; restructuring of plankton communities; nutrient enrichment; elimination of hypoxia and reduced metal contamination of biota; and food web changes that decrease resistance of the estuary to nutrient pollution. Detection of these changes and discovery of their causes through environmental monitoring have been essential for establishing and measuring outcomes of environmental policies that aim to maintain high water quality and sustain services provided by estuarine-coastal ecosystems. The wide range of variability time scales and the multiplicity of interacting drivers place heavy demands on estuarine monitoring programs. But the San Francisco Bay case study illustrates why the imperative for monitoring has never been greater.

California↗

Present and Reference Concentrations and Yields of Suspended Sediment in Streams in the Great Lakes Region and Adjacent Areas

In-stream suspended sediment and siltation and downstream sedimentation are common problems in surface waters throughout the United States. The most effective way to improve surface waters impaired by sediments is to reduce the contributions from human activities rather than try to reduce loadings from natural sources. Total suspended sediment/solids (TSS) concentration data were obtained from 964 streams in the Great Lakes, Ohio, Upper Mississippi, and Souris-Red-Rainy River Basins from 1951 to 2002. These data were used to estimate median concentrations, loads, yields, and volumetrically (flow) weighted (VW) concentrations where streamflow data were available. SPAtial Regression-Tree Analysis (SPARTA) was applied to land-use-adjusted (residualized) TSS data and environmental-characteristic data to determine the natural factors that best described the distribution of median and VW TSS concentrations and yields and to delineate zones with similar natural factors affecting TSS, enabling reference or natural concentrations and yields to be estimated. Soil properties (clay and organic-matter content, erodibility, and permeability), basin slope, and land use (percentage of agriculture) were the factors most strongly related to the distribution of median and VW TSS concentrations. TSS yields were most strongly related to amount of precipitation and the resulting runoff, and secondarily to the factors related to high TSS concentrations. Reference median TSS concentrations ranged from 5 to 26 milligrams per liter (mg/L), reference median annual VW TSS concentrations ranged from 10 to 168 mg/L, and reference TSS yields ranged from about 980 to 90,000 kilograms per square kilometer per year. Independent streams (streams with no overlapping drainage areas) with TSS data were ranked by how much their water quality exceeded reference concentrations and yields. Most streams exceeding reference conditions were in the central part of the study area, where agricultural activities are the most intensive; however, other sites exceeding reference conditions were identified outside of this area. Whether concentrations or yields should be considered in guiding rehabilitation efforts depends on whether in-stream or downstream effects are more important. Although this study attempted to obtain all available water-quality data for the study area, any actual prioritization of sites for remediation would need to rely on more extensive data collection or numerical models that can accurately simulate the effects of various human activities in a range of environmental settings.

Scientific Investigations Report↗

Fire, forests and city water supply

Forest landscapes generate 57 percent of runoff worldwide and supply water to more than 4 billion people (Millennium Ecosystem Assessment, 2005). As the world population continues to increase, there is a strong need to understand how forest processes link together in a cascade to provide people with water services like hydropower, aquaculture, drinking water and flood protection (Carvalho-Santos, Honrado and Hein, 2014). Wildfire is a major disturbance affecting forested watersheds and the water they provide (Box 1) (Paton et al., 2015). Several regions have experienced shifts in wildfires from natural ignition sources (primarily lightning) to ignitions dominated by human activities, especially in areas where populations are increasing (Moritz et al., 2014; Balch et al., 2017). Occasional wildfire is essential for the health and functioning of fire-adapted ecosystems through its effects on nutrient cycling, plant diversity and succession, and pest regulation (Pausas and Keeley, 2019). It also reduces the risk of subsequent wildfires until a forest has accumulated sufficient fuels and conditions are conducive for another fire. Extreme and hazardous wildfires, on the other hand, can cause erosion, gullying, soil loss and flooding – and, in severe cases, even debris flows and flash floods – by removing the protective functions of forests on hillsides (Ebel and Moody, 2017). Extreme wildfires have become more common after decades of fire suppression, allowing forests to become much denser with vegetation and causing more fuels to build up over time. Combined with increasing summer drought, this can have impacts on water yield and the ability of upstream forests to deliver high-quality water because forest vegetation uses less water immediately after fire and, in environments influenced by snow, more snow can accumulate in forest clearings (Kinoshita and Hogue, 2015; Hallema et al., 2019). Therefore, accounting for wildfire impacts on forests in water planning has become a priority for the nexus of fire, water and society or, in other words, the connection between fire risk and water security (Figure 1) (Martin, 2016). In this article, we discuss managed forest landscapes as nature-based solutions for water and explore how fire affects the provision of water-related services.

Unasylva↗

Sharing land via keystone structure: Retaining naturally regenerated trees may efficiently benefit birds in plantations

Meeting food/wood demands with increasing human population and per-capita consumption is a pressing conservation issue, and is often framed as a choice between land sparing and land sharing. Although most empirical studies comparing the efficacy of land sparing and sharing supported land sparing, land sharing may be more efficient if its performance is tested by rigorous experimental design and habitat structures providing crucial resources for various species––keystone structures––are clearly involved. We launched a manipulative experiment to retain naturally regenerated broad-leaved trees when harvesting conifer plantations in central Hokkaido, northern Japan. We surveyed birds in harvested treatments, unharvested plantation controls and natural forest references one-year before the harvest and for three consecutive post-harvest years. We developed a hierarchical community model separating abundance and space-use (territorial proportion overlapping treatment plots) subject to imperfect detection to assess population consequences of retention harvesting. Application of the model to our data showed that retaining some broad-leaved trees increased total abundance of forest birds over the harvest rotation cycle. Specifically, pre-harvest survey showed that the amount of broad-leaved trees increased forest bird abundance in a concave manner (i.e., in a form of diminishing-return). After harvesting, a small amount of retained broad-leaved trees mitigated negative harvesting impacts on abundance though retention harvesting reduced the space-use. Nevertheless, positive retention effects on the post-harvest bird density as the product of abundance and space-use exhibited a concave form. Thus, small profit reductions were shown to yield large increases in forest bird abundance. The difference in bird abundance between clear-cutting and low amounts of broad-leaved tree retention increased slightly from the first to second post-harvesting years. We conclude that retaining a small amount of broad-leaved trees may be a cost-effective on-site conservation approach for the management of conifer plantations. Retention of 20-30 broad-leaved trees per ha may be sufficient to maintain higher forest bird abundance than clear-cutting over the rotation cycle. Retention approaches can be incorporated into management systems using certification schemes and best management practices. Developing an awareness of the roles and values of naturally regenerated trees is needed to diversify plantations.

Ecological Applications↗

Applications of a broad-spectrum tool for conservation and fisheries analysis: Aquatic gap analysis

Natural resources support all of our social and economic activities, as well as our biological existence. Humans have little control over most of the physical, biological, and sociological conditions dictating the status and capacity of natural resources in any particular area. However, the most rapid and threatening influences on natural resources typically are anthropogenic overuse and degradation. In addition, living natural resources (i.e., organisms) do not respect political boundaries, but are aware of their optimal habitat and environmental conditions. Most organisms have wider spatial ranges than the jurisdictional boundaries of environmental agencies that deal with them; even within those jurisdictions, information is patchy and disconnected. Planning and projecting effects of ecological management are difficult, because many organisms, habitat conditions, and interactions are involved. Conservation and responsible resource use involves wise management and manipulation of the aspects of the environment and biological communities that can be effectively changed. Tools and data sets that provide new insights and analysis capabilities can enhance the ability of resource managers to make wise decisions and plan effective, long-term management strategies. Aquatic gap analysis has been developed to provide those benefits. Gap analysis is more than just the assessment of the match or mis-match (i.e., gaps) between habitats of ecological value and areas with an appropriate level of environmental protection (e.g., refuges, parks, preserves), as the name suggests. Rather, a Gap Analysis project is a process which leads to an organized database of georeferenced information and previously available tools to examine conservation and other ecological issues; it provides a geographic analysis platform that serves as a foundation for aquatic ecological studies. This analytical tool box allows one to conduct assessments of all habitat elements within an area of interest. Aquatic gap analysis naturally focuses on aquatic habitats. The analytical tools are largely based on specification of the species-habitat relations for the system and organism group of interest (Morrison et al. 2003; McKenna et al. 2006; Steen et al. 2006; Sowa et al. 2007). The Great Lakes Regional Aquatic Gap Analysis (GLGap) project focuses primarily on lotic habitat of the U.S. Great Lakes drainage basin and associated states and has been developed to address fish and fisheries issues. These tools are unique because they allow us to address problems at a range of scales from the region to the stream segment and include the ability to predict species specific occurrence or abundance for most of the fish species in the study area. The results and types of questions that can be addressed provide better global understanding of the ecological context within which specific natural resources fit (e.g., neighboring environments and resources, and large and small scale processes). The geographic analysis platform consists of broad and flexible geospatial tools (and associated data) with many potential applications. The objectives of this article are to provide a brief overview of GLGap methods and analysis tools, and demonstrate conservation and planning applications of those data and tools. Although there are many potential applications, we will highlight just three: (1) support for the Eastern Brook Trout Joint Venture (EBTJV), (2) Aquatic Life classification in Wisconsin, and (3) an educational tool that makes use of Google Earth (use of trade or product names does not imply endorsement by the U.S. Government) and Internet accessibility.

Gap Analysis Bulletin↗

Guidebook of the western United States: Part A - The northern Pacific route, with a side trip to Yellowstone Park

The United States of America comprise an area so vast in extent and so diverse in natural features as well as in characters due to human agency that the American citizen who knows thoroughly his own country must have traveled widely and observed wisely. To 'know America first' is a patriotic obligation, but to meet this obligation the railroad traveler needs to have his eyes directed toward the more important or essential things within his field of vision and then to have much that he sees explained by what is unseen in the swift passage of the train. Indeed, many things that attract his attention are inexplicable except as the story of the past is available to enable him to interpret the present. Herein lie the value and the charm of history, whether human or geologic. The present stimulus given to travel in the home country will encourage many thousands of Americans to study geography at first hand. To make this study most profitable the traveler needs a handbook that will answer the questions that come to his mind so readily along the way. Furthermore, the aim of such a guide should be to stimulate the eye in the selection of the essentials in the scene that so rapidly unfolds itself in the crossing of the continent. In recognition of the opportunity afforded in 1915 to render service of this kind to an unusually large number of American citizens, as well as to visitors from other countries, the United States Geological Survey has prepared a series of guidebooks covering four of the older railroad routes west of the Mississippi. These books are educational in purpose, but the method adopted is to entertain the traveler by making more interesting what he sees from the car window. The plan of the series is to present authoritative information that may enable the reader to realize adequately the scenic and material resources of the region he is traversing, to comprehend correctly the basis of its development, and above all to appreciate keenly the real value of the country he looks out upon, not as so many square miles of territory represented on the map in a railroad folder by meaningless spaces, but rather as land - real estate, if you please - varying widely in present appearance because differing largely in its history, and characterized by even greater variation in values because possessing diversified natural resources. One region may be such as to afford a livelihood for only a pastoral people; another may present opportunity for intensive agriculture; still another may contain hidden stores of mineral wealth that may attract large industrial development; and, taken together, these varied resources afford the promise of long-continued prosperity for this or that State. Items of interest in civic development or references to significant epochs in the record of discovery and settlement may be interspersed with explanations of mountain and valley or statements of geologic history. In a broad way the story of the West is a unit, and every chapter should be told in order to meet fully the needs of the tourist who aims to understand all that he sees. To such a traveler-reader this series of guidebooks is addressed. To this interpretation of our own country the United States Geological Survey brings the accumulated data of decades of pioneering investigation, and the present contribution is only one type of return to the public which has supported this scientific work under the Federal Government.

Bulletin↗

Guidebook of the western United States: Part B - The overland route, with a side trip to Yellowstone Park

The United States of America comprise an area so vast in extent and so diverse in natural features as well as in characters due to human agency that the American citizen who knows thoroughly his own country must have traveled widely and observed wisely. To 'know America first' is a patriotic obligation, but to meet this obligation the railroad traveler needs to have his eyes directed toward the more important or essential things within his field of vision and then to have much that he sees explained by what is unseen in the swift passage of the train. Indeed, many things that attract his attention are inexplicable except as the story of the past is available to enable him to interpret the present. Herein lie the value and the charm of history, whether human or geologic. The present stimulus given to travel in the home country will encourage many thousands of Americans to study geography at first hand. To make this study most profitable the traveler needs a handbook that will answer the questions that come to his mind so readily along the way. Furthermore, the aim of such a guide should be to stimulate the eye in the selection of the essentials in the scene that so rapidly unfolds itself in the crossing of the continent. In recognition of the opportunity afforded in 1915 to render service of this kind to an unusually large number of American citizens as well as to visitors from other countries, the United States Geological Survey has prepared a series of guidebooks covering four of the older railroad routes west of the Mississippi. These books are educational in purpose, but the method adopted is to entertain the traveler by making more interesting what he sees from the car window. The plan of the series is to present authoritative information that may enable the reader to realize adequately the scenic and material resources of the region he is traversing, to comprehend correctly the basis of its development, and above all to appreciate keenly the real value of the country he looks out upon, not as so many square miles of territory represented on the map in a railroad folder by meaningless spaces, but rather as land - real estate, if you please - varying widely in present appearance because differing largely in its history and characterized by even greater variation in values because possessing diversified natural resources. One region may be such as to afford a livelihood for only a pastoral people; another may present opportunity for intensive agriculture; still another may contain hidden stores of mineral wealth that may attract large industrial development; and taken together these varied resources afford the promise of long-continued prosperity for this or that State. Items of interest in civic development or references to significant epochs in the record of discovery and settlement may be interspersed with explanations of mountain and valley or statements of geologic history. In a broad way, the story of the West is a unit, and every chapter should be told in order to meet fully the needs of the tourist who aims to understand all that he sees. To such a traveler-reader this series of guidebooks is addressed. To this interpretation of our own country the United States Geological Survey brings the accumulated data of decades of pioneering investigation, and the present contribution is only one type of return to the public which has supported this scientific work under the Federal Government. In preparing the description of the country traversed by the Overland Route the geographic and geologic information already published as well as unpublished material in the possession of the Geological Survey has been utilized, but to supplement this material Messrs. Lee, Stone, and Gale made a field examination of the entire route in 1914, Mr. Lee working between Omaha and Ogden, Mr. Stone between Ogden and Yellowstone, and Mr. Gale between Ogden and San Francisco. Information has been furnished by Profs. J. C. Merriam a

Bulletin↗

Guidebook of the western United States: Part C - The Santa Fe route, with a side trip to Grand Canyon of the Colorado

The United States of America comprise an area so vast in extent and so diverse in natural features as well as in characters due to human agency that the American citizen who knows thoroughly his own country must have traveled widely and observed wisely. To 'know America first' is a patriotic obligation, but to meet this obligation the railroad traveler needs to have his eyes directed toward the more important or essential things within his field of vision and then to have much that he sees explained by what is unseen in the swift passage of the train. Indeed, many things that attract his attention are inexplicable except as the story of the past is available to enable him to interpret the present. Herein lie the value and the charm of history, whether human or geologic. The present stimulus given to travel in the home country will encourage many thousands of Americans to study geography at first hand. To make this study most profitable the traveler needs a handbook that will answer the questions that come to his mind so readily along the way. Furthermore, the aim of such a guide should be to stimulate the eye in the selection of the essentials in the scene that so rapidly unfolds itself in the crossing of the continent. In recognition of the opportunity afforded in 1915 to render service of this kind to an unusually large number of American citizens, as well as to visitors from other countries, the United States Geological Survey has prepared a series of guidebooks covering four of the older railroad routes west of the Mississippi. These books are educational in purpose, but the method adopted is to entertain the traveler by making more interesting what he sees from the car window. The plan of the series is to present authoritative information that may enable the reader to realize adequately the scenic and material resources of the region he is traversing, to comprehend correctly the basis of its development, and above all to appreciate keenly the real value of the country he looks out upon, not as so many square miles of territory represented on the map in a railroad folder by meaningless spaces, but rather as land - real estate, if you please - varying widely in present appearance because differing largely in its history and characterized by even greater variation in values because possessing diversified natural resources. One region may be such as to afford a livelihood for only a pastoral people; another may present opportunity for intensive agriculture; still another may contain hidden stores of mineral wealth that may attract large industrial development; and taken together these varied resources afford the promise of long-continued prosperity for this or that State. Items of interest in civic development or references to significant epochs in the record of discovery and settlement may be interspersed with explanations of mountain and valley or statements of geologic history. In a broad way, the story of the West is a unit, and every chapter should be told in order to meet fully the needs of the tourist who aims to understand all that he sees. To such a traveler-reader this series of guidebooks is addressed. To this interpretation of our own country the United States Geological Survey brings the accumulated data of decades of pioneering investigation, and the present contribution is only one type of return to the public which has supported this scientific work under the Federal Government. In preparing the description of the country traversed by the Santa Fe Route the geographic and geologic information already published as well as unpublished material in the possession of the Geological Survey has been utilized, but to supplement this material Mr. Darton made a field examination of the entire route in 1914. Information has been furnished by Erasmus Haworth, J. E. Todd, and R. T. Hill, as well as by others whose writings are listed in the bibliography at the end of the text. Cooperation has been rendered by the United States Reclamation Service and by bureaus of the Department of Agriculture. Railroad officials and other citizens have also generously given their aid, and other members of the Survey have freely cooperated in the work. For the purpose of furnishing the traveler with a graphic presentation of each part of his route, the accompanying maps, 25 sheets in all, have been prepared, with a degree of accuracy probably never bsfore attained in a guidebook, aiid their arrangement has been planned to meet the convenience of the reader. The special topographic surveys necessary to complete these maps of the route were made by W. O. Tufts.

Bulletin↗

Guidebook of the western United States: Part E - The Denver & Rio Grande Western route

The United States of America comprise an area so vast in extent and so diverse in natural features as well as in characters due to human agency that the American citizen who knows thoroughly his own country must have traveled widely and observed wisely. To 'know America first' is a patriotic obligation, but to meet this obligation the railroad traveler needs to have his eyes directed toward the more important or essential things within his field of vision and then to have much that he sees explained by what is unseen in the swift passage of the train. Indeed, many things that attract his attention are inexplicable except as the story of the past is available to enable him to interpret the present. Herein lie the value and the charm of history, whether human or geologic. The present stimulus given to travel in the home country will encourage many thousands of Americans to study geography at first hand. To make this study most profitable the traveler needs a handbook that will answer the questions that come to his mind so readily along the way. Furthermore, the aim of such a guide should be to stimulate the eye in the selection of the essentials in the scene that so rapidly unfolds itself in the crossing of the continent. In recognition of the opportunity to render service of this kind to an unusually large number of American citizens, as well as to visitors from other countries, the United States Geological Survey has published a series of guidebooks covering four of the older railroad routes west of the Mississippi. The present volume is an addition to this series and covers one of the finest scenic routes of the continent. These books are educational in purpose, but the method adopted is to entertain the traveler by making more interesting what he sees from the car window. The plan of the series is to present authoritative information that may enable the reader to realize adequately the scenic and material resources of the region he is traversing, to comprehend correctly the basis of its development, and above all to appreciate keenly the real value of the country he looks out upon, not as so many square miles of territory represented on the map in a railroad folder by meaningless spaces, but rather as land - real estate, if you please - varying widely in present appearance because differing largely in its history, and characterized by even greater variation in values because possessing diversified natural resources. One region may be such as to afford a livelihood for only a pastoral people; another may present opportunity for intensive agriculture; still another may contain hidden stores of mineral wealth that may attract large industrial development; and, taken together, these varied resources afford, the promise of long-continued prosperity for this or that State. Items of interest in civic development or references to significant epochs in the record of discovery and settlement may be interspersed. with explanations of mountain and valley or statements of geologic history. In a broad way the story of the West is a unit, and every chapter should be told in order to meet fully the needs of the tourist who aims to understand all that he sees. To such a traveler-reader this series of guidebooks is addressed. To this interpretation of our own country the United States Geological Survey brings the accumulated data of decades of pioneering investigation, and the present contribution is only one type of return to the public which has supported this scientific work under the Federal Government - a by-product of research. In the preparation of the description of the country traversed by the Denver & Rio Grande Western Route the geographic and geologic information already published as well as unpublished material in the possession of the Geological Survey has been utilized, but to supplement this material Mr. Campbell made a field examination of the entire route in 1915-1916. Information has been furnished by others,

Bulletin↗

Novel landscape elements within natural gas fields increase densities but not fitness of an important songbird nest predator

Identifying the elements within human-altered landscapes most associated with population and community changes is critical for conservation and management of sensitive species. We investigated which features of habitat change from natural gas development best explained the density of deer mice ( Peromyscus maniculatus ), an important nest predator of declining sagebrush-obligate songbirds. During 2014–2016, we quantified the spatial extent of habitat change (well pads, roads, and reclaimed areas [i.e., reseeded soils]) surrounding 12 sites spanning two natural gas fields in Wyoming, USA. We further tested whether the altered plant communities within reclaimed areas provided benefits to deer mice, by assessing multiple fitness indices. Deer mouse density increased with surrounding reclaimed area. Powder tracking and dietary analyses confirmed that mice moved through and consumed plant species found exclusively within reclaimed areas. Concomitant fitness metrics of mice, however, were neutrally or negatively related to the amount of surrounding reclaimed area. Mice therefore did not derive any apparent fitness benefits associated with living near reclaimed areas, despite the presence of novel food resources, indicating that increased abundance may be a product of mice dispersing toward reseeded soils. Our study contributes mechanistic insights into the complexities of how human-induced changes to landscapes can influence community dynamics. Minimizing total habitat disturbed during construction, expediting reclamation practices, and using only native and regionally-local seed mixes would likely help minimize increases in synanthropic rodent predators within energy fields. More efficient restoration of disturbed habitat, moreover, may help ameliorate altered predator-prey relationships that affect the success of sensitive species.

Wyoming↗

Review of Sky dance of the woodcock: The habits and habitats of a strange little bird by Greg Hoch

American Woodcock ( Scolopax minor ) have enthralled conservationists (including Aldo Leopold), bird watchers, wildlife enthusiasts, hunters, and others interested in the natural world for centuries. No doubt, woodcock also have enthralled humans in North America for millennia prior to written descriptions of the woodcock’s courtship displays, habitat preferences, and curious behavior and anatomy. As perhaps the most extensively studied species of shorebird in the world, there is a rich and extensive literature, both scientific and popular, focused on woodcock ecology, behavior, and hunting. To that extensive body of literature, Sky Dance of the Woodcock provides an updated summary of their natural history, habitat relations, and conservation. Sky Dance of the Woodcock takes its title from the courtship display of male woodcock, which consists of an elaborate aerial flight incorporating sound produced both vocally and mechanically via highly modified flight feathers. The aerial displays are accompanied by similarly unusual behavior on the ground, including a distinctive ‘peent’ call. This courtship display happens across much of eastern North America each spring, and Hoch uses this wonder to capture the imagination of the readers of his text. Hoch begins the book with an overview of some of the mystery and fascination surrounding woodcock and builds from that opening to describe woodcock anatomy, natural history, and behavior, before describing their courtship display in greater detail. From there, Hoch describes woodcock-habitat relations, provides a historical overview of woodcock hunting, identifies current threats to woodcock populations, summarizes past and recent woodcock research, and finally, presents an updated overview of woodcock conservation and habitat management. Throughout, there is sometimes surprising information about things as simple as what woodcock eat, to more complex assessment of how woodcock use landscapes and migrate to and from spring and summer breeding areas. This book will undoubtedly appeal to woodcock enthusiasts of a variety to stripes. Woodcock hunters and bird watchers alike will learn something about woodcock-habitat relations, behavior, and conservation. Professional biologists and researchers will benefit from Hoch’s synthesis of a wide range of information about woodcock, and landowners and managers can use some of the concepts in this book to inform their decisions about how to manage lands under their control. Along the way, everyone who reads Sky Dance of the Woodcock is likely to come away with an enhanced appreciation of this captivating bird.

Prairie Naturalist↗

Groundwater-Quality Assessment, Pike County, Pennsylvania, 2007

Pike County, a 545 square-mile area in northeastern Pennsylvania, has experienced the largest relative population growth of any county in the state from 1990 to 2000 and its population is projected to grow substantially through 2025. This growing population may result in added dependence and stresses on water resources, including the potential to reduce the quantity and degrade the quality of groundwater and associated stream base flow with changing land use. Groundwater is the main source of drinking water in the county and is derived primarily from fractured-rock aquifers (shales, siltstones, and sandstones) and some unconsolidated glacial deposits that are recharged locally from precipitation. The principal land uses in the county as of 2005 were public, residential, agricultural, hunt club/private recreational, roads, and commercial. The public lands cover a third of the county and include national park, state park, and other state lands, much of which are forested. Individual on-site wells and wastewater disposal are common in many residential areas. In 2007, the U.S. Geological Survey, in cooperation with the Pike County Conservation District, began a study to provide current information on groundwater quality throughout the county that will be helpful for water-resource planning. The countywide reconnaissance assessment of groundwater quality documents current conditions with existing land uses and may serve as a baseline of groundwater quality for future comparison. Twenty wells were sampled in 2007 throughout Pike County to represent groundwater quality in the principal land uses (commercial, high-density and moderate-density residential with on-site wastewater disposal, residential in a sewered area, pre-development, and undeveloped) and geologic units (five fractured-rock aquifers and one glacial unconsolidated aquifer). Analyses selected for the groundwater samples were intended to identify naturally occurring constituents from the aquifer or constituents introduced by human activities that pose a health risk or otherwise were of concern in groundwater in the county. The analyses included major ions, nutrients, selected trace metals, volatile organic compounds (VOCs), selected organic wastewater compounds, gross alpha-particle and gross beta-particle activity, uranium, and radon-222. Analyses of the 20 samples were primarily for dissolved constituents, but six samples were analyzed for both dissolved and total metals. Results of the 2007 sampling indicated few water-quality problems, although concentrations of some constituents indicated influence of human activities on groundwater. No constituent analyzed exceeded any primary drinking-water standard or maximum contaminant level (MCL) established by the U.S. Environmental Protection Agency. Radon-222 levels were greater than, or equal to, the proposed MCL of 300 picocuries per liter (pCi/L) in water from 15 (75 percent) of the 20 wells. Radon-222 levels did not exceed the alternative MCL of 4,000 pCi/L in any groundwater sample. Radon-222 is naturally occurring, and the greatest concentrations (up to 2,650 pCi/L) were in water samples from wells in members of the Catskill Formation, a fractured-rock aquifer. The dissolved arsenic concentration of 3.9 micrograms per liter (ug/L) in one sample was greater than the health-advisory (HA) level of 2 ug/L but less than the MCL of 10 ug/L. Recommended or secondary maximum contaminant levels (SMCLs) were exceeded for pH, dissolved iron, and dissolved manganese. In six samples analyzed for dissolved and total concentrations of selected metals, total concentrations commonly were much greater than dissolved concentrations of iron, and to a lesser degree, for arsenic, lead, copper, and manganese. Concentrations of iron above the SMCL of 300 ug/L may be more widespread in the county for particulate iron than for dissolved iron. The total arsenic concentration in one of the six samples was greater than the HA level of

Scientific Investigations Report↗

Phytoplankton bloom dynamics in coastal ecosystems: A review with some general lessons from sustained investigation of San Francisco Bay, California

Phytoplankton blooms are prominent features of biological variability in shallow coastal ecosystems such as estuaries, lagoons, bays, and tidal rivers. Long-term observation and research in San Francisco Bay illustrates some patterns of phytoplankton spatial and temporal variability and the underlying mechanisms of this variability. Blooms are events of rapid production and accumulation of phytoplankton biomass that are usually responses to changing physical forcings originating in the coastal ocean (e.g., tides), the atmosphere (wind), or on the land surface (precipitation and river runoff). These physical forcings have different timescales of variability, so algal blooms can be short-term episodic events, recurrent seasonal phenomena, or rare events associated with exceptional climatic or hydrologic conditions. The biogeochemical role of phytoplankton primary production is to transform and incorporate reactive inorganic elements into organic forms, and these transformations are rapid and lead to measurable geochemical change during blooms. Examples include the depletion of inorganic nutrients (N, P, Si), supersaturation of oxygen and removal of carbon dioxide, shifts in the isotopic composition of reactive elements (C, N), production of climatically active trace gases (methyl bromide, dimethylsulfide), changes in the chemical form and toxicity of trace metals (As, Cd, Ni, Zn), changes in the biochemical composition and reactivity of the suspended particulate matter, and synthesis of organic matter required for the reproduction and growth of heterotrophs, including bacteria, zooplankton, and benthic consumer animals. Some classes of phytoplankton play special roles in the cycling of elements or synthesis of specific organic molecules, but we have only rudimentary understanding of the forces that select for and promote blooms of these species. Mounting evidence suggests that the natural cycles of bloom variability are being altered on a global scale by human activities including the input of toxic contaminants and nutrients, manipulation of river flows, and translocation of species. This hypothesis will be a key component of our effort to understand global change at the land-sea interface. Pursuit of this hypothesis will require creative approaches for distinguishing natural and anthropogenic sources of phytoplankton population variability, as well as recognition that the modes of human disturbance of coastal bloom cycles operate interactively and cannot be studied as isolated processes.

California↗

Questa baseline and pre-mining ground-water quality investigation. 17. Geomorphology of the Red River Valley, Taos County, New Mexico, and influence on ground-water flow in the shallow alluvial aquifer

In April 2001, the U.S. Geological Survey (USGS) and the New Mexico Environment Department (NMED) began a cooperative study to infer the pre-mining ground-water chemistry at the Molycorp molybdenum mine site in the Red River Valley of north-central New Mexico. This report is one in a series of reports that can be used to determine pre-mining ground-water conditions at the mine site. Molycorp’s Questa molybdenum mine in the Red River Valley, northern New Mexico, is located near the margin of the Questa caldera in a highly mineralized region. The bedrock of the Taos Range surrounding the Red River is composed of Proterozoic rocks of various types, which are intruded and overlain by Oligocene volcanic rocks associated with the Questa caldera. Locally, these rocks were altered by hydrothermal activity. The alteration zones that contain sulfide minerals are particularly important because they constitute the commercial ore bodies of the region and, where exposed to weathering, form sites of rapid erosion referred to as alteration scars. Over the past thousand years, if not over the entire Holocene, erosion rates were spatially variable. Forested hillslopes eroded at about 0.04 millimeter per year, whereas alteration scars eroded at about 2.7 millimeters per year. The erosion rate of the alteration scars is unusually rapid for naturally occurring sites that have not been disturbed by humans. Watersheds containing large alteration scars delivered more sediment to the Red River Valley than the Red River could remove. Consequently, large debris fans, as much as 80 meters thick, developed within the valley. The geomorphology of the Red River Valley has had several large influences on the hydrology of the shallow alluvial aquifer, and those influences were in effect before the onset of mining within the watershed. Several reaches where alluvial ground water emerges to become Red River streamflow were observed by a tracer dilution study conducted in 2001. The aquifer narrows where erosion-resistant bedrock, which tends to form vertical cliffs, restricts the width of the valley bottom. Although the presence of a shallow bedrock sill, overlain by shallow alluvium, is a plausible cause of ground-water emergence, this cause was not demonstrated in the study area. The water-table gradient can locally decrease in the downstream direction because of changes in the hydraulic properties of the alluvium, and this may be a contributing cause of ground-water emergence. However, at one site (near Cabin Springs), ground-water emergence could not be explained by spatial changes in geometric or hydraulic properties of the aquifer. Furthermore, the available evidence demonstrates that ground water flowing through bedrock fractures or colluvium entered the north side of the alluvial aquifer, and is the cause of ground-water emergence. At that location the alluvial aquifer was already flowing full, causing the excess water to emerge into the stream. An indirect consequence of altered rock in the tributary watersheds is the rapid erosion rate of alteration scars combined with the hydraulic properties of sediments shed from those scars. Where alteration scars are large the debris fans at the mouths of the tributary watersheds substantially encroach into the Red River Valley. At such locations debris-fan materials dominate the width and thickness of the alluvium in the valley and reduce the rate of flow of ground water within the Red River alluvial aquifer. Most sites of groundwater emergence are located immediately upstream from or along the margins of debris fans. A substantial fraction of the ground water approaching a debris fan can emerge to become streamflow. This last observation has three implications. First, very little water can flow the entire length of the study area entirely within the alluvial aquifer because the ground water repeatedly contacts debris-fan sediments over that length. Second, it follows that emerging water containing unique elemental constituents must have entered the alluvial aquifer at a relatively short distance upstream. Third, a gravel aquifer downstream from a large debris fan can transmit more ground water than flows into it through the debris fan. This observation explains how the water table can be naturally, and permanently, located well beneath the level of the bed of a perennial stream.

New Mexico↗

Cattle and cultivators: A study of competition over natural resources in north Senegal

This study presents an analysis of the interaction of humans and their environment in the arid Sahel ian zone of northern Senegal. It compares a pastoral community which lives primarily from the production of livestock and a farming community whose activities have traditionally centered on crop production. Living side by side but following different strategies for securing their livelihoods, these groups find themselves in increasing conflict over how the diminishing resources of the area should be used. The pastoral livelihood system, as practiced in the case study community of Maka Ndandary, is essentially conservationist in its approach to natural resources. It regulates the activities of community members toward the environment and employs diverse strategies to protect local resources against incursion by outsiders. The agricultural village, represented by the case study of Teud Bitty, takes a much more extractive approach to its resources. As resources have diminished over time, the villagers have become even more aggressive in their attempts to exploit what remains, whether soils or trees ... both within and outside their territory.

Report↗

Fort Collins Science Center-Fiscal year 2009 science accomplishments

Public land and natural resource managers in the United States are confronted with increasingly complex decisions that have important ramifications for both ecological and human systems. The scientists and technical professionals at the U.S. Geological Survey Fort Collins Science Center?many of whom are at the forefront of their fields?possess a unique blend of ecological, socioeconomic, and technological expertise. Because of this diverse talent, Fort Collins Science Center staff are able to apply a systems approach to investigating complicated ecological problems in a way that helps answer critical management questions. In addition, the Fort Collins Science Center has a long record of working closely with the academic community through cooperative agreements and other collaborations. The Fort Collins Science Center is deeply engaged with other U.S. Geological Survey science centers and partners throughout the Department of the Interior. As a regular practice, we incorporate the expertise of these partners in providing a full complement of ?the right people? to effectively tackle the multifaceted research problems of today's resource-management world. In Fiscal Year 2009, the Fort Collins Science Center's scientific and technical professionals continued research vital to Department of the Interior's science and management needs. Fort Collins Science Center work also supported the science needs of other Federal and State agencies as well as non-government organizations. Specifically, Fort Collins Science Center research and technical assistance focused on client and partner needs and goals in the areas of biological information management and delivery, enterprise information, fisheries and aquatic systems, invasive species, status and trends of biological resources (including human dimensions), terrestrial ecosystems, and wildlife resources. In the process, Fort Collins Science Center science addressed natural-science information needs identified in the U.S. Geological Survey Science Strategy (http://www.usgs.gov/science_strategy), including understanding and predicting change in ecosystems, climate variability and change, energy development and land management, the role of the environment and wildlife in human health, freshwater ecosystems, data integration, and evolving technologies. Several science projects were expanded in Fiscal Year 2009 to meet these evolving needs.

Open-File Report↗

Integration of social and ecological sciences for natural resource decision making: Challenges and opportunities

The last 25 years have witnessed growing recognition that natural resource management decisions depend as much on understanding humans and their social interactions as on understanding the interactions between non-human organisms and their environment. Decision science provides a framework for integrating ecological and social factors into a decision, but challenges to integration remain. The decision-analytic framework elicits values and preferences to help articulate objectives, and then evaluates the outcomes of alternative management actions to achieve these objectives. Integrating social science into these steps can be hindered by failing to include social scientists as more than stakeholder-process facilitators, assuming that specific decision-analytic skills are commonplace for social scientists, misperceptions of social data as inherently qualitative, timescale mismatches for iterating through decision analysis and collecting relevant social data, difficulties in predicting human behavior, and failures of institutions to recognize the importance of this integration. We engage these challenges, and suggest solutions to them, helping move forward the integration of social and biological/ecological knowledge and considerations in decision-making.

Environmental Management↗

Initial comparison of pollen counting methods using precipitation and ambient air samples and automated artificial intelligence to support national monitoring objectives

Given the endemic nature of pollen throughout the environment, the impact upon human health, and the need for more extensive and better measurements of pollen in the USA, a preliminary project within the National Atmospheric Deposition Program’s (NADP) National Trends Network (NTN) was developed. Pollen was measured in ambient air by several methods and in precipitation wet deposition samples at three monitoring sites in the NTN. A method for counting pollen on filters was developed and provided pollen counts for NADP atmospheric wet-deposition samples and high-volume ambient air samplers (HVAS) for comparison with co-located traditional National Allergy Bureau microscopy samples and a commercially available pollen sensor (PS) counting method during the 2021 pollen season. The goals of this project were to test the potential of available air-monitoring infrastructures to obtain improved spatial measurements of aeroallergens, compare pollen counting results from the various methods, and to determine the suitability of using wet deposition samples for pollen collection. The onset and senescence of pollen seasons for general categories of genera compared favorably for each method at each site, indicating that pollen monitoring using wet-deposition and ambient air sampling filters could provide useful information to inform scientific studies, but not likely for public health objectives. Pollen counts were log transformed for Pearson product moment correlation. Tree pollen counts were correlated at all sites for daily PS data and traditional counting data ( R = 0.69–0.84), but statistical correlations between methods for grass and weed pollen were weak (0.40 < R < 0.60) or considered not correlated ( R < 0.40). Total pollen counts in NADP precipitation samples were correlated with traditional and PS counts at only one of three sites. Pollen counts for the weekly HVAS filter samples were correlated with PS counts for trees ( R = 0.62) and with NAB counts for trees ( R = 0.68) and weeds ( R = 0.72). Correlations in the data between methods suggest that, given further methods development, a variety of techniques could be integrated to expand and enhance existing pollen monitoring networks. Improved ambient air and atmospheric deposition sampling methods specifically targeted for pollen capture and analysis could support the collection of accurate and efficient meaningful aeroallergen data from existing atmospheric monitoring networks.

Aerobiologia↗