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At least 91 records · Page 5Linked to original sources

Capturing interactions between nitrogen and hydrological cycles under historical climate and land use: Susquehanna watershed analysis with the GFDL land model LM3-TAN

We developed a process model LM3-TAN to assess the combined effects of direct human influences and climate change on terrestrial and aquatic nitrogen (TAN) cycling. The model was developed by expanding NOAA's Geophysical Fluid Dynamics Laboratory land model LM3V-N of coupled terrestrial carbon and nitrogen (C-N) cycling and including new N cycling processes and inputs such as a soil denitrification, point N sources to streams (i.e., sewage), and stream transport and microbial processes. Because the model integrates ecological, hydrological, and biogeochemical processes, it captures key controls of the transport and fate of N in the vegetation–soil–river system in a comprehensive and consistent framework which is responsive to climatic variations and land-use changes. We applied the model at 1/8° resolution for a study of the Susquehanna River Basin. We simulated with LM3-TAN stream dissolved organic-N, ammonium-N, and nitrate-N loads throughout the river network, and we evaluated the modeled loads for 1986–2005 using data from 16 monitoring stations as well as a reported budget for the entire basin. By accounting for interannual hydrologic variability, the model was able to capture interannual variations of stream N loadings. While the model was calibrated with the stream N loads only at the last downstream Susquehanna River Basin Commission station Marietta (40°02' N, 76°32' W), it captured the N loads well at multiple locations within the basin with different climate regimes, land-use types, and associated N sources and transformations in the sub-basins. Furthermore, the calculated and previously reported N budgets agreed well at the level of the whole Susquehanna watershed. Here we illustrate how point and non-point N sources contributing to the various ecosystems are stored, lost, and exported via the river. Local analysis of six sub-basins showed combined effects of land use and climate on soil denitrification rates, with the highest rates in the Lower Susquehanna Sub-Basin (extensive agriculture; Atlantic coastal climate) and the lowest rates in the West Branch Susquehanna Sub-Basin (mostly forest; Great Lakes and Midwest climate). In the re-growing secondary forests, most of the N from non-point sources was stored in the vegetation and soil, but in the agricultural lands most N inputs were removed by soil denitrification, indicating that anthropogenic N applications could drive substantial increase of N 2 O emission, an intermediate of the denitrification process.

Pennsylvania↗

Fate of trace organic compounds during vadose zone soil treatment in an onsite wastewater system

During onsite wastewater treatment, trace organic compounds are often present in the effluents applied to subsurface soils for advanced treatment during vadose zone percolation and groundwater recharge. The fate of the endocrine-disrupting surfactant metabolites 4-nonylphenol (NP), 4-nonylphenolmonoethoxylate (NP1EO), and 4-nonylphenolmonoethoxycarboxylate (NP1EC), metal-chelating agents ethylenediaminetetraacetic acid (EDTA) and nitrilotriacetic acid (NTA), antimicrobial agent triclosan, stimulant caffeine, and antibiotic sulfamethoxazole during transport through an unsaturated sandy loam soil was studied at a field-scale test site. To assess the effects of effluent quality and hydraulic loading rate (HLR) on compound fate in the soil profile, two effluents (septic tank or textile biofilter) were applied at two design HLRs (2 or 8 cm/d). Chemical concentrations were determined in the two effluents and soil pore water at 60, 120, and 240 cm below the soil infiltrative surface. Concentrations of trace organic compounds in septic tank effluent were reduced by more than 90% during transport through 240 cm (often within 60 cm) of soil, likely due to sorption and biotransformation. However, the concentration of NP increased with depth in the shallow soil profile. Additional treatment of anaerobic septic tank effluent with an aerobic textile biofilter reduced effluent concentrations of many compounds, but generally did not affect any changes in pore water concentrations. The soil profile receiving septic tank effluent (vs. textile biofilter effluent) generally had greater percent removal efficiencies. EDTA, NP, NP1EC, and sulfamethoxazole were measured in soil pore water, indicating the ability of some trace organic compounds to reach shallow groundwater. Risk is highly dependent on the degree of further treatment in the saturated zone and the types and proximity of uses for the receiving groundwater environment.

Environmental Toxicology and Chemistry↗

POLARIS: A 30-meter probabilistic soil series map of the contiguous United States

A new complete map of soil series probabilities has been produced for the contiguous United States at a 30 m spatial resolution. This innovative database, named POLARIS, is constructed using available high-resolution geospatial environmental data and a state-of-the-art machine learning algorithm (DSMART-HPC) to remap the Soil Survey Geographic (SSURGO) database. This 9 billion grid cell database is possible using available high performance computing resources. POLARIS provides a spatially continuous, internally consistent, quantitative prediction of soil series. It offers potential solutions to the primary weaknesses in SSURGO: 1) unmapped areas are gap-filled using survey data from the surrounding regions, 2) the artificial discontinuities at political boundaries are removed, and 3) the use of high resolution environmental covariate data leads to a spatial disaggregation of the coarse polygons. The geospatial environmental covariates that have the largest role in assembling POLARIS over the contiguous United States (CONUS) are fine-scale (30 m) elevation data and coarse-scale (~ 2 km) estimates of the geographic distribution of uranium, thorium, and potassium. A preliminary validation of POLARIS using the NRCS National Soil Information System (NASIS) database shows variable performance over CONUS. In general, the best performance is obtained at grid cells where DSMART-HPC is most able to reduce the chance of misclassification. The important role of environmental covariates in limiting prediction uncertainty suggests including additional covariates is pivotal to improving POLARIS' accuracy. This database has the potential to improve the modeling of biogeochemical, water, and energy cycles in environmental models; enhance availability of data for precision agriculture; and assist hydrologic monitoring and forecasting to ensure food and water security.

Geoderma↗

Predicting redox conditions in groundwater at a regional scale

Defining the oxic-suboxic interface is often critical for determining pathways for nitrate transport in groundwater and to streams at the local scale. Defining this interface on a regional scale is complicated by the spatial variability of reaction rates. The probability of oxic groundwater in the Chesapeake Bay watershed was predicted by relating dissolved O 2 concentrations in groundwater samples to indicators of residence time and/or electron donor availability using logistic regression. Variables that describe surficial geology, position in the flow system, and soil drainage were important predictors of oxic water. The probability of encountering oxic groundwater at a 30 m depth and the depth to the bottom of the oxic layer were predicted for the Chesapeake Bay watershed. The influence of depth to the bottom of the oxic layer on stream nitrate concentrations and time lags (i.e., time period between land application of nitrogen and its effect on streams) are illustrated using model simulations for hypothetical basins. Regional maps of the probability of oxic groundwater should prove useful as indicators of groundwater susceptibility and stream susceptibility to contaminant sources derived from groundwater.

Maryland, New York, Pennsylvania, Virginia↗

Microbial antimony biogeochemistry: Enzymes, regulation, and related metabolic pathways

Antimony (Sb) is a toxic metalloid that occurs widely at trace concentrations in soil, aquatic systems, and the atmosphere. Nowadays, with the development of its new industrial applications and the corresponding expansion of antimony mining activities, the phenomenon of antimony pollution has become an increasingly serious concern. In recent years, research interest in Sb has been growing and reflects a fundamental scientific concern regarding Sb in the environment. In this review, we summarize the recent research on bacterial antimony transformations, especially those regarding antimony uptake, efflux, antimonite oxidation, and antimonate reduction. We conclude that our current understanding of antimony biochemistry and biogeochemistry is roughly equivalent to where that of arsenic was some 20 years ago. This portends the possibility of future discoveries with regard to the ability of microorganisms to conserve energy for their growth from antimony redox reactions and the isolation of new species of “antimonotrophs.”

Applied and Environmental Microbiology↗

Earthquake and ambient vibration monitoring of the steel-frame UCLA factor building

Dynamic property measurements of the moment-resisting steel-frame University of California, Los Angeles, Factor building are being made to assess how forces are distributed over the building. Fourier amplitude spectra have been calculated from several intervals of ambient vibrations, a 24-hour period of strong winds, and from the 28 March 2003 Encino, California (ML = 2.9), the 3 September 2002 Yorba Linda, California (ML = 4.7), and the 3 November 2002 Central Alaska (Mw = 7.9) earthquakes. Measurements made from the ambient vibration records show that the first-mode frequency of horizontal vibration is between 0.55 and 0.6 Hz. The second horizontal mode has a frequency between 1.6 and 1.9 Hz. In contrast, the first-mode frequencies measured from earthquake data are about 0.05 to 0.1 Hz lower than those corresponding to ambient vibration recordings indicating softening of the soil-structure system as amplitudes become larger. The frequencies revert to pre-earthquake levels within five minutes of the Yorba Linda earthquake. Shaking due to strong winds that occurred during the Encino earthquake dominates the frequency decrease, which correlates in time with the duration of the strong winds. The first shear wave recorded from the Encino and Yorba Linda earthquakes takes about 0.4 sec to travel up the 17-story building. ?? 2005, Earthquake Engineering Research Institute.

Earthquake Spectra↗

Chapter J: Issues and challenges in the application of geostatistics and spatial-data analysis to the characterization of sand-and-gravel resources

Sand-and-gravel (aggregate) resources are a critical component of the Nation's infrastructure, yet aggregate-mining technologies lag far behind those of metalliferous mining and other sectors. Deposit-evaluation and site-characterization methodologies are antiquated, and few serious studies of the potential applications of spatial-data analysis and geostatistics have been published. However, because of commodity usage and the necessary proximity of a mine to end use, aggregate-resource exploration and evaluation differ fundamentally from comparable activities for metalliferous ores. Acceptable practices, therefore, can reflect this cruder scale. The increasing use of computer technologies is colliding with the need for sand-and-gravel mines to modernize and improve their overall efficiency of exploration, mine planning, scheduling, automation, and other operations. The emergence of megaquarries in the 21st century will also be a contributing factor. Preliminary research into the practical applications of exploratory-data analysis (EDA) have been promising. For example, EDA was used to develop a linear-regression equation to forecast freeze-thaw durability from absorption values for Lower Paleozoic carbonate rocks mined for crushed aggregate from quarries in Oklahoma. Applications of EDA within a spatial context, a method of spatial-data analysis, have also been promising, as with the investigation of undeveloped sand-and-gravel resources in the sedimentary deposits of Pleistocene Lake Bonneville, Utah. Formal geostatistical investigations of sand-and-gravel deposits are quite rare, and the primary focus of those studies that have been completed is on the spatial characterization of deposit thickness and its subsequent effect on ore reserves. A thorough investigation of a gravel deposit in an active aggregate-mining area in central Essex, U.K., emphasized the problems inherent in the geostatistical characterization of particle-size-analysis data. Beyond such factors as common drilling methods jeopardizing the accuracy of the size-distribution curve, the application of formal geostatistical principles has other limitations. Many of the variables used in evaluating gravel deposits, including such sedimentologic parameters as sorting and such United Soil Classification System parameters as gradation coefficient, are nonadditive. Also, uniform sampling methods, such as drilling, are relatively uncommon, and sampling is generally accomplished by a combination of boreholes, water-well logs, test pits, trenches, stratigraphic columns from exposures, and, possibly, some geophysical cross sections. When evaluated in consideration of the fact that uniform mining blocks are also uncommon in practice, subsequent complexities in establishment of the volume/variance relation are inevitable. Several approaches exist to confront the limitations of geostatistical methods in evaluating sand-and-gravel deposits. Initially, we must acknowledge the practical requirements of the aggregate industry, as well as the limitations of the data collected by that industry, as a function of what the industry requires at the practical level, and consider that broader acceptance of formal geostatistics may require modifications of typical exploration and sampling protocols. Future investigations should utilize data from the full spectrum of sand-and-gravel deposits (flood plain, glacial, catastrophic flood, and marine), integrate such other disci plines as sedimentology and geophysics into the research, develop commodity-specific approaches to nonadditive variables, and include the results of comparative drilling.

Bulletin↗

A molecular investigation of soil organic carbon composition across a subalpine catchment

The dynamics of soil organic carbon (SOC) storage and turnover are a critical component of the global carbon cycle. Mechanistic models seeking to represent these complex dynamics require detailed SOC compositions, which are currently difficult to characterize quantitatively. Here, we address this challenge by using a novel approach that combines Fourier transform infrared spectroscopy (FT-IR) and bulk carbon X-ray absorption spectroscopy (XAS) to determine the abundance of SOC functional groups, using elemental analysis (EA) to constrain the total amount of SOC. We used this SOC functional group abundance (SOC-fga) method to compare variability in SOC compositions as a function of depth across a subalpine watershed (East River, Colorado, USA) and found a large degree of variability in SOC functional group abundances between sites at different elevations. Soils at a lower elevation are predominantly composed of polysaccharides, while soils at a higher elevation have more substantial portions of carbonyl, phenolic, or aromatic carbon. We discuss the potential drivers of differences in SOC composition between these sites, including vegetation inputs, internal processing and losses, and elevation-driven environmental factors. Although numerical models would facilitate the understanding and evaluation of the observed SOC distributions, quantitative and meaningful measurements of SOC molecular compositions are required to guide such models. Comparison among commonly used characterization techniques on shared reference materials is a critical next step for advancing our understanding of the complex processes controlling SOC compositions.

Soil Systems↗

Reversal of forest soil acidification in the northeastern United States and eastern Canada: Site and soil factors contributing to recovery

As acidic deposition has decreased across Eastern North America, forest soils at some sites are beginning to show reversal of soil acidification. However, the degree of recovery appears to vary and is not fully explained by deposition declines alone. To assess if other site and soil factors can help to explain degree of recovery from acid deposition, soil resampling chemistry data (8- to 24-year time interval) from 23 sites in the United States and Canada, located across 25° longitude from Eastern Maine to Western Ontario, were explored. Site and soil factors included recovery years, sulfate (SO 4 2− ) deposition history, SO 4 2− reduction rate, C horizon pH and exchangeable calcium (Ca), O and B horizon pH, base saturation, and exchangeable Ca and aluminum (Al) at the time of the initial sampling. We found that O and B horizons that were initially acidified to a greater degree showed greater recovery and B horizon recovery was further associated with an increase in recovery years and lower initial SO 4 2− deposition. Forest soils that seemingly have low buffering capacity and a reduced potential for recovery have the resilience to recover from the effects of previous high levels of acidic deposition. This suggests, that predictions of where forest soils acidification reversal will occur across the landscape should be refined to acknowledge the importance of upper soil profile horizon chemistry rather than the more traditional approach using only parent material characteristics.

Soil Systems↗

Have sustained acidic deposition decreases led to increased calcium availability in recovering watersheds of the Adirondack region of New York, USA?

Soil calcium depletion has been strongly linked to acidic deposition in eastern North America and recent studies have begun to document the recovery of soils in response to large decreases in acidic deposition. However, increased calcium availability has not yet been seen in the B horizon, where calcium depletion has been most acute, but mineral weathering is critically important for resupplying ecosystem calcium. This study provides new data in seven watersheds in the Adirondack region (New York, USA), where acidic deposition impacts on soils and surface waters have been substantial and recovery remains slow. Initial sampling in 1997–1998 and 2003–2004 was repeated in 2009–2010, 2014, 2016 and 2017. Exchangeable calcium concentrations increased by an average of 43% in the Oe horizon of three watersheds where this horizon was sampled (10.7–15.3 cmol c kg −1 ). Changes in calcium were not seen in the individual watersheds of the Oa and B horizons, but as a group, a significant increase in calcium was measured in the upper B horizon. Liming of a calcium-depleted watershed also tripled calcium concentration in the upper B horizon in 5 years. However, stream calcium in unlimed watersheds decreased over the study period. Small increases in B-horizon calcium may be underway

New York↗

Simulated biogeochemical effects of seawater restoration on diked salt marshes, Cape Cod National Seashore, Massachusetts, U.S.

Efforts have been underway worldwide to reintroduce seawater to many historically diked salt marshes for restoration of tidal flow and associated estuarine habitat. Seawater restoration to a diked Cape Cod marsh was simulated using the computer program PHREEQC based on previously conducted microcosm experiments to better understand the associated timing and sequence of multiple biogeochemical reactions and their implications to aquatic health. Model simulations show that acidic, reducing waters with high concentrations of sorbed ferrous iron (Fe[II]), aluminum (Al), sulfide (S 2− ), ammonia (NH 4 + + NH 3 ), and phosphate (PO 4 3− ) are released through desorption and sediment weathering following salination that can disrupt aquatic habitat. Models were developed for one-dimensional reactive transport of solutes in diked, flooded (DF) marsh sediments and subaerially exposed, diked, drained (DD) sediments by curve matching porewater solute concentrations and adjusting the sedimentary organic matter (SOM) degradation rates based on the timing and magnitude of Fe(II) and S 2− concentrations. Simulated salination of the DD sediments, in particular, showed a large release of Al, Fe(II), NH 4 + , and PO 4 3− ; the redox shift to reductive dissolution provided higher rates of SOM oxidation. The sediment type, iron source, and seasonal timing associated with seawater restoration can affect the chemical speciation and toxicity of constituents to aquatic habitat. The constituents of concern and their associated complex biogeochemical reactions simulated in this study are directly relevant to the increasingly common coastal marsh salination, either through tidal restoration or rising sea level.

Massachusetts↗

FUNDAMENTAL MODAL BEHAVIOR OF AN EARTHQUAKE-EXCITED BRIDGE.

The magnitude 6. 1 Morgan Hill, California, earthquake of April 24, 1984, produced a set of acceleration records at the freeway overpass in San Jose carrying I-280/I-680 across U. S. 101, 12 km from the epicenter. Peak accelerations reached 0. 10 g at ground level and 0. 16 g in the box girder. The integrated displacements at frequencies higher than 3 Hz permit the identification of the fundamental modes and frequencies. The horizontal modes have frequencies of 308 and 3. 9 Hz and include ground level motions up to 90% of peak deck motion. The soil-structure system contributes to these modes.

Conference Paper↗

Infrared heater system for warming tropical forest understory plants and soils

The response of tropical forests to global warming is one of the largest uncertainties in predicting the future carbon balance of Earth. To determine the likely effects of elevated temperatures on tropical forest understory plants and soils, as well as other ecosystems, an infrared (IR) heater system was developed to provide in situ warming for the Tropical Responses to Altered Climate Experiment (TRACE) in the Luquillo Experimental Forest in Puerto Rico. Three replicate heated 4-m- diameter plots were warmed to maintain a 4°C increase in understory vegetation compared to three unheated control plots, as sensed by IR thermometers. The equipment was larger than any used previously and was subjected to challenges different from those of many temperate ecosystem warming systems, including frequent power surges and outages, high humidity, heavy rains, hurricanes, saturated clayey soils, and steep slopes. The system was able to maintain the target 4.0°C increase in hourly average vegetation temperatures to within ± 0.1°C. The vegetation was heterogeneous and on a 21° slope, which decreased uniformity of the warming treatment on the plots; yet, the green leaves were fairly uniformly warmed, and there was little difference among 0–10 cm depth soil temperatures at the plot centers, edges, and midway between. Soil temperatures at the 40–50 cm depth increased about 3°C compared to the controls after a month of warming. As expected, the soil in the heated plots dried faster than that of the control plots, but the average soil moisture remained adequate for the plants. The TRACE heating system produced an adequately uniform warming precisely controlled down to at least 50-cm soil depth, thereby creating a treatment that allows for assessing mechanistic responses of tropical plants and soil to warming, with applicability to other ecosystems. No physical obstacles to scaling the approach to taller vegetation (i.e., trees) and larger plots were observed.

Puerto Rico↗

Adaptive management for soil ecosystem services

Ecosystem services provided by soil include regulation of the atmosphere and climate, primary (including agricultural) production, waste processing, decomposition, nutrient conservation, water purification, erosion control, medical resources, pest control, and disease mitigation. The simultaneous production of these multiple services arises from complex interactions among diverse aboveground and belowground communities across multiple scales. When a system is mismanaged, non-linear and persistent losses in ecosystem services can arise. Adaptive management is an approach to management designed to reduce uncertainty as management proceeds. By developing alternative hypotheses, testing these hypotheses and adjusting management in response to outcomes, managers can probe dynamic mechanistic relationships among aboveground and belowground soil system components. In doing so, soil ecosystem services can be preserved and critical ecological thresholds avoided. Here, we present an adaptive management framework designed to reduce uncertainty surrounding the soil system, even when soil ecosystem services production is not the explicit management objective, so that managers can reach their management goals without undermining soil multifunctionality or contributing to an irreversible loss of soil ecosystem services.

Journal of Environmental Management↗

Comparison between two statistically based methods, and two physically based models developed to compute daily mean streamflow at ungaged locations in the Cedar River Basin, Iowa

A variety of individuals from water resource managers to recreational users need streamflow information for planning and decisionmaking at locations where there are no streamgages. To address this problem, two statistically based methods, the Flow Duration Curve Transfer method and the Flow Anywhere method, were developed for statewide application and the two physically based models, the Precipitation Runoff Modeling-System and the Soil and Water Assessment Tool, were only developed for application for the Cedar River Basin. Observed and estimated streamflows for the two methods and models were compared for goodness of fit at 13 streamgages modeled in the Cedar River Basin by using the Nash-Sutcliffe and the percent-bias efficiency values. Based on median and mean Nash-Sutcliffe values for the 13 streamgages the Precipitation Runoff Modeling-System and Soil and Water Assessment Tool models appear to have performed similarly and better than Flow Duration Curve Transfer and Flow Anywhere methods. Based on median and mean percent bias values, the Soil and Water Assessment Tool model appears to have generally overestimated daily mean streamflows, whereas the Precipitation Runoff Modeling-System model and statistical methods appear to have underestimated daily mean streamflows. The Flow Duration Curve Transfer method produced the lowest median and mean percent bias values and appears to perform better than the other models.

Iowa↗

Alternate wetting and drying decreases methylmercury in flooded rice (Oryza sativa) systems

In flooded soils, including those found in rice ( Oryza sativa L.) fields, microbes convert inorganic Hg to more toxic methylmercury (MeHg). Methylmercury is accumulated in rice grain, potentially affecting health. Methylmercury in rice field surface water can bioaccumulate in wildlife. We evaluated how introducing aerobic periods into an otherwise continuously flooded rice growing season affects MeHg dynamics. Conventional continuously flooded (CF) rice field water management was compared with alternate wetting and drying, where irrigation was stopped twice during the growing season, allowing soil to dry to 35% volumetric moisture content, at which point plots were reflooded (AWD-35). Methylmercury studies began at harvest in Year 3 and throughout Year 4 of a 4-yr replicated field experiment. Bulk soil, water, and plant samples were analyzed for MeHg and total Hg (THg), and iron (Fe) speciation was measured in soil samples. Rice grain yield over 4 yr did not differ between treatments. Soil chemistry responded quickly to AWD-35 dry-downs, showing significant oxidation of Fe(II) accompanied by a significant reduction of MeHg concentration (76% reduction at harvest) compared with CF. Surface water MeHg decreased by 68 and 39% in the growing and fallow seasons, respectively, suggesting that the effects of AWD-35 management can last through to the fallow season. The AWD-35 treatment reduced rice grain MeHg and THg by 60 and 32%, respectively. These results suggest that the more aerobic conditions caused by AWD-35 limited the activity of Hg(II)-methylating microbes and may be an effective way to reduce MeHg concentrations in rice ecosystems.

Soil Science Society of America Journal↗

A framework for understanding the effects of subsurface agricultural drainage on downstream flows

Understanding controls on streamflow volume and magnitude is important to water resource management applications, such as critical water and transportation structure design and floodplain mapping. Changes in land use and agricultural practices, such as subsurface agricultural drainage, may be contributing to changes in streamflow characteristics. Subsurface agricultural drainage, also known as tile drainage, is the practice of installing drains in the subsurface of agricultural fields to improve productivity. Because of the complex interactions between subsurface drainage systems, precipitation, local soil conditions, and land management practices, it is difficult to determine how subsurface agricultural drainage affects downstream flow. Previously developed subsurface agricultural drainage conceptual models under dry, saturated, and winter conditions are summarized, and current literature on the effects of subsurface agricultural drainage on downstream flows, focusing on peak flow, non-event flow, and total flow to develop frameworks for discussing these systems is compiled. The effects that subsurface drainage has on hydrologic systems are expected to vary by site and are seasonally based on system design, soil type, moisture conditions, precipitation characteristics, and land conditions. Subsurface drainage can affect the magnitude of peak flow by converting surface runoff from a storm event to subsurface runoff. By increasing hydrologic connectivity of a catchment, subsurface drainage can increase non-event flow or the flow between two storm events, typically dependent on lateral flow through the subsurface and groundwater. Theoretically, by diverting water from groundwater recharge or by reducing water available for evapotranspiration, subsurface drainage may increase the total volume of flow. Precipitation changes may increase infiltration, excess overland flow, and flood risk regardless of the presence or absence of subsurface drainage.

Illinois, Iowa, Michigan, Minnesota, Missouri, Mon↗

Evaluation of conceptual models of natural organic matter (humus) from a consideration of the chemical and biochemical processes of humification

Natural organic matter (NOM) has been studied for more than 200 years because of its importance in enhancing soil fertility, soil structure, and water-holding capacity and as a carbon sink in the global carbon cycle. Two different types of models have been proposed for NOM: (1) the humic polymer models and (2) the molecular aggregate models. In the humic polymer models, NOM molecules are depicted as large (humic) polymers that have unique chemical structures that are different from those of the precursor plant degradation products. In the molecular aggregate models, NOM is depicted as being composed of molecular aggregates (supramolecular aggregates) of plant degradation products held together by non-covalent bonds. The preponderance of evidence favors the supramolecular aggregate models. These models were developed by studying the properties of NOM extracted from soils and natural waters, and as such, they provide only a very generalized picture of the structure of NOM aggregates in soils and natural waters prior to extraction. A compartmental model, in which the structure of the NOM in each of the compartments is treated separately, should provide a more accurate representation of NOM in soil and sediment systems. The proposed NOM compartments are: (1) partially degraded plant tissue, (2) biomass from microorganisms, (3) organic coatings on mineral grains, (4) pyrolytic carbon, (5) organic precipitates, and (6) dissolved organic matter (DOM) in interstitial water. Within each of these compartments there are NOM supramolecular aggregates that will be dissolved by the solvent systems that are used by researchers for extraction of NOM from soils and sediments. In natural water systems DOM may be considered as existing in two subcompartments: (1) truly dissolved DOM and (2) colloidal DOM.

Scientific Investigations Report↗