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At least 91 records · Page 5Linked to original sources
USGS1992

Factors influencing the distribution of blackchin tilapia Sarotherodon melanotherodon (Osteichthyes: Cichlidae) in the Indian River system, Florida

The blackchin tilapia, S arotherodon melanotheron , was first collected from the Indian River system, in Brevard County, Florida, in 1980. Since its introduction, this species has expanded its range northward along the coast approximately 37 km, to just north of Whites Point, Brevard County, and southward about 68 km to Vero Beach, Indian River County. Laboratory studies on salinity tolerance indicate an ability of this species to tolerate hypersaline concentrations of at least 100 ppt, and to reproduce in salinities of up to 35 ppt. The northern distribution of blackchin tilapia is almost certainly limited by cold temperature; however, the potential exists for extensive coastal, and possibly inland, invasion south of its present limits.

Florida↗
USGS1988

U.S. Geological Survey applied research studies of the Cheyenne River system, South Dakota; description and collation of data, water years 1985-86

The Cheyenne River system in Western South Dakota has been impacted by the discharge of about 100 million metric tons of gold-mill tailings to Whitewood Creek near Lead, South Dakota. In April 1985, the U.S. Geological Survey initiated an extensive series of research studies to investigate the magnitude of the impact and to define important processes acting on the contaminated sediments present in the system. The report presents all data collected during the 1985 and 1986 water years for these research studies. Some of the data included have been published previously. Hydrologic, geochemical, and biologic data are available for sites on Whitewood Creek, the Belle Fourche and Cheyenne Rivers, and for the Cheyenne River arm of Lake Oahe. Data complexity varies from routine discharge and water quality to very complex photon-correlation spectroscopy and energy-dispersive x-ray analysis. Methods for sample collection, handling and preservation, and laboratory analysis are also presented. No interpretations or complex statistical summaries are included. (USGS)

Open-File Report↗
USGS2013

Including independent estimates and uncertainty to quantify total abundance of fish migrating in a large river system: walleye ( Sander vitreus ) in the Maumee River, Ohio

Walleye (Sander vitreus) in Lake Erie is a valuable and migratory species that spawns in tributaries. We used hydroacoustic sampling, gill net sampling, and Bayesian state-space modeling to estimate the spawning stock abundance, characterize size and sex structure, and explore environmental factors cuing migration of walleye in the Maumee River for 2011 and 2012. We estimated the spawning stock abundance to be between 431,000 and 1,446,000 individuals in 2011 and between 386,400 and 857,200 individuals in 2012 (95% Bayesian credible intervals). A back-calculation from a concurrent larval fish study produced an estimate of 78,000 to 237,000 spawners for 2011. The sex ratio was skewed towards males early in the spawning season but approached 1:1 later, and larger individuals entered the river earlier in the season than smaller individuals. Walleye migration was greater during low river discharge and intermediate temperatures. Our approach to estimating absolute abundance and uncertainty as well as characterization of the spawning stock could improve assessment and management of this species, and our methodology is applicable to other diadromous populations.

Ohio↗
USGS1990

U.S. Geological Survey applied research studies of the Cheyenne River System, South Dakota; description and collation of data, water years 1987-88

The Cheyenne River System in western South Dakota has been impacted by the discharge of about 100 million metric tons of gold-mill tailings to Whitewood Creek near Lead, South Dakota. In April 1985, the U.S. Geological Survey initiated an extensive series of research studies to investigate the magnitude of the impact and to define important processes acting on the contaminated sediments present in the system. The report presents all data collected during the 1987 and 1988 water years for these research studies. Some of the data included have been published previously. Data collected in the 1985 and 1986 water years have been published in a companion report (U.S. Geological Survey Open-File Report 88-484). Hydrologic, geochemical, and biologic data are available for sites on Whitewood Creek, and the Belle Fourche and Cheyenne Rivers. Data complexity varies from routine discharge and water-quality to very complex energy-dispersive x-ray analysis. Methods for sample collection, handling and preservation, and laboratory analysis are also presented. No interpretations or complex statistical summaries are included. (See also W89-08390) (USGS)

Open-File Report↗
USGS2004

Quantitative mineralogy of the Yukon River system: Changes with reach and season, and determining sediment provenance

The mineralogy of Yukon River basin sediment has been studied by quantitative X-ray diffraction. Bed, beach, bar, and suspended sediments were analyzed using the RockJock computer program. The bed sediments were collected from the main stem and from selected tributaries during a single trip down river, from Whitehorse to the Yukon River delta, during the summer of 2001. Beach and bar sediments were collected from the confluence region of the Tanana and Yukon Rivers during the summer of 2003. Suspended sediments were collected at three stations on the Yukon River and from a single station on the Tanana River at various times during the summers of 2001 through 2003, with the most complete set of samples collected during the summer of 2002. Changes in mineralogy of Yukon River bed sediments are related to sediment dilution or concentration effects from tributary sediment and to chemical weathering during transport. Carbonate minerals compose about 2 wt% of the bed sediments near Whitehorse, but increase to 14 wt% with the entry of the White River tributary above Dawson. Thereafter, the proportion of carbonate minerals decreases downstream to values of about 1 to 7 wt% near the mouth of the Yukon River. Quartz and feldspar contents of bed sediments vary greatly with the introduction of Pelly River and White River sediments, but thereafter either increase irregularly (quartz from 20 to about 50 wt%) or remain relatively constant (feldspar at about 35 wt%) with distance downstream. Clay mineral content increases irregularly downstream from about 15 to about 30 wt%. The chief clay mineral is chlorite, followed by illite + smectite; there is little to no kaolinite. The total organic carbon content of the bed sediments remains relatively constant with distance for the main stem (generally 1 to 2 wt%, with one exception), but fluctuates for the tributaries (1 to 6 wt%). The mineralogies of the suspended sediments and sediment flow data were used to calculate the amount of mineral dissolution during transport between Eagle and Pilot Station, a distance of over 2000 km. We estimate that approximately 3 wt% of the quartz, 15 wt% of the feldspar (1 wt% of the alkali and 25 wt% of the plagioclase), and 26 wt% of the carbonates (31 wt% of the calcite and 15 wt% of the dolomite) carried by the river dissolve in this reach. The mineralogies of the suspended sediments change with the season. For example, during the summer of 2002 the quartz content varied by 20 wt%, with a minimum in mid-summer. The calcite content varied by a similar amount, and had a maximum corresponding to the quartz minimum. These modes are related to the relative amount of sediment flowing from the White River system, which is relatively poor in quartz, but rich in carbonate minerals. Suspended total clay minerals varied by as much as 25 wt%, with maxima in mid July, and suspended feldspar varied up to 10 wt%. Suspended sediment data from the summers of 2001 and 2003 support the 2002 trends. A calculation technique was developed to determine theproportion of various sediment sources in a mixed sediment by unmixing its quantitative mineralogy. Results from this method indicate that at least three sediment sources can be identified quantitatively with good accuracy. With this technique, sediment mineralogies can be used to calculate the relative flux of sediment from different tributaries, thereby identifying sediment provenance.

American Mineralogist↗
USGS2015

Validation of a spatial model used to locate fish spawning reef construction sites in the St. Clair–Detroit River system

Lake sturgeon ( Acipenser fulvescens ) populations have suffered precipitous declines in the St. Clair–Detroit River system, following the removal of gravel spawning substrates and overfishing in the late 1800s to mid-1900s. To assist the remediation of lake sturgeon spawning habitat, three hydrodynamic models were integrated into a spatial model to identify areas in two large rivers, where water velocities were appropriate for the restoration of lake sturgeon spawning habitat. Here we use water velocity data collected with an acoustic Doppler current profiler (ADCP) to assess the ability of the spatial model and its sub-models to correctly identify areas where water velocities were deemed suitable for restoration of fish spawning habitat. ArcMap 10.1 was used to create raster grids of water velocity data from model estimates and ADCP measurements which were compared to determine the percentage of cells similarly classified as unsuitable, suitable, or ideal for fish spawning habitat remediation. The spatial model categorized 65% of the raster cells the same as depth-averaged water velocity measurements from the ADCP and 72% of the raster cells the same as surface water velocity measurements from the ADCP. Sub-models focused on depth-averaged velocities categorized the greatest percentage of cells similar to ADCP measurements where 74% and 76% of cells were the same as depth-averaged water velocity measurements. Our results indicate that integrating depth-averaged and surface water velocity hydrodynamic models may have biased the spatial model and overestimated suitable spawning habitat. A model solely integrating depth-averaged velocity models could improve identification of areas suitable for restoration of fish spawning habitat.

Michigan↗
USGS2020

Review of trap-and-haul for managing Pacific salmonids (Oncorhynchus spp.) in impounded river systems

High-head dams are migration barriers for Pacific salmon Oncorhynchus spp. in many river systems and recovery measures for impacted stocks are limited. Trap-and-haul has been widely used in attempts to facilitate recovery but information from existing programs has not been synthesized to inform improvements to aid recovery of salmonids in systems with high-head dams. We reviewed 17 trap-and-haul programs regarding Pacific salmon to: (1) summarize information about facility design, operation and biological effects; (2) identify critical knowledge gaps; and (3) evaluate trap-and-haul as a current and future management tool. Existing programs are operated to address a range of management goals including restoring access to historical habitats, temporarily reducing exposure to dangerous in-river conditions, and reintroducing ecological processes upstream from dams. Information gathered from decades of operation on facility design criteria and fish handling protocols, and robust literature on fish collection and passage are available. While many aspects of trap-and-haul have been evaluated, effects on population productivity and sustainability remain poorly understood. Long-term and systematic studies of trap-and-haul outcomes are rare, and assessments can be confounded by concurrent management actions and broad ecological and climatic effects. Existing data suggest that performance and effectiveness vary among programs and over various time scales within programs. Although critical information gaps exist, trap-and-haul is an important management and conservation tool for providing Pacific salmonids access to historical habitats. Successful application of trap-and-haul programs requires long-term commitment and an adaptive management approach by dam owners and stakeholders, and careful planning of new programs.

California, Idaho, Oregon, Washington↗
USGS2016

Benchmarking wide swath altimetry-based river discharge estimation algorithms for the Ganges river system

The objective of this study is to compare the effectiveness of three algorithms that estimate discharge from remotely sensed observables (river width, water surface height, and water surface slope) in anticipation of the forthcoming NASA/CNES Surface Water and Ocean Topography (SWOT) mission. SWOT promises to provide these measurements simultaneously, and the river discharge algorithms included here are designed to work with these data. Two algorithms were built around Manning's equation, the Metropolis Manning (MetroMan) method, and the Mean Flow and Geomorphology (MFG) method, and one approach uses hydraulic geometry to estimate discharge, the at-many-stations hydraulic geometry (AMHG) method. A well-calibrated and ground-truthed hydrodynamic model of the Ganges river system (HEC-RAS) was used as reference for three rivers from the Ganges River Delta: the main stem of Ganges, the Arial-Khan, and the Mohananda Rivers. The high seasonal variability of these rivers due to the Monsoon presented a unique opportunity to thoroughly assess the discharge algorithms in light of typical monsoon regime rivers. It was found that the MFG method provides the most accurate discharge estimations in most cases, with an average relative root-mean-squared error (RRMSE) across all three reaches of 35.5%. It is followed closely by the Metropolis Manning algorithm, with an average RRMSE of 51.5%. However, the MFG method's reliance on knowledge of prior river discharge limits its application on ungauged rivers. In terms of input data requirement at ungauged regions with no prior records, the Metropolis Manning algorithm provides a more practical alternative over a region that is lacking in historical observations as the algorithm requires less ancillary data. The AMHG algorithm, while requiring the least prior river data, provided the least accurate discharge measurements with an average wet and dry season RRMSE of 79.8% and 119.1%, respectively, across all rivers studied. This poor performance is directly traced to poor estimation of AMHG via a remotely sensed proxy, and results improve commensurate with MFG and MetroMan when prior AMHG information is given to the method. Therefore, we cannot recommend use of AMHG without inclusion of this prior information, at least for the studied rivers. The dry season discharge (within-bank flow) was captured well by all methods, while the wet season (floodplain flow) appeared more challenging. The picture that emerges from this study is that a multialgorithm approach may be appropriate during flood inundation periods in Ganges Delta.

Ganges River Delta↗
USGS2014

A model to locate potential areas for lake sturgeon spawning habitat construction in the St. Clair–Detroit River System

In response to a need for objective scientific information that could be used to help remediate loss of fish spawning habitat in the St. Clair River and Detroit River International Areas of Concern, this paper summarizes a large-scale geographic mapping investigation. Our study integrates data on two variables that many riverine fishes respond to in selecting where to spawn in these waters (water flow velocity and water depth) with available maps of the St. Clair–Detroit River System (SC–DRS). Our objectives were to locate and map these two physical components of fish habitat in the St. Clair and Detroit rivers and Lake St. Clair using a geographic information system (GIS) and to identify where, theoretically, fish spawning habitat could be remediated in these rivers. The target fish species to which this model applies is lake sturgeon (Acipenser fulvescens), but spawning reefs constructed for lake sturgeon in this system have been used for spawning by 17 species of fish. Our analysis revealed areas in each river that possessed suitable water velocity and depth for fish spawning and therefore could theoretically be remediated by the addition of rock-rubble substrate like that used at two previously remediated sites in the Detroit River at Belle Isle and Fighting Island. Results of our analysis revealed that only 3% of the total area of the SC–DRS possesses the necessary combination of water depth and high flow velocity to be indicated by the model as potential spawning habitat for lake sturgeon.

Michigan, Ontario↗
USGS2022

Identifying and characterizing juvenile lake sturgeon (Acipenser fulvescens, Rafinesque, 1817) occupancy hot spots within the St. Clair-Detroit River System

Over the past two decades, extensive monitoring has been conducted in the St. Clair – Detroit River System to describe spatial and temporal patterns of lake sturgeon ( Acipenser fulvescens ). To characterize spatial patterns in juvenile lake sturgeon (<1000 mm TL) based on survey collections, ‘hot spots’ were identified through optimized hot spot analysis (HSA). This HSA was then interpolated by inverse distance weighted analysis to determine extent of identified ‘hot spots’ and ‘cold spots’. Additionally, habitat variables (i.e., water depth, water velocity, and dominant substrate type) were investigated using a single season occupancy model to determine their influence on juvenile lake sturgeon occupancy probability. In total, 1203 juvenile lake sturgeon were captured across 4197 surveys. Three unique ‘hot spots’ were identified; western Lake Erie, Fighting Island in the Detroit River, and the North Channel in the St. Clair River. Interpolated ‘hot spots’ encompassed 73.1 km² in western Lake Erie, 4.7 km² near Fighting Island, and 6.6 km² in the North Channel. Detection probabilities within ‘hot spots’ ranged from 8.8%–43.4%. No habitat variables significantly predicted juvenile lake sturgeon occupancy. Juvenile lake sturgeon were captured in western Lake Erie where the water depth was >5.1 m and odds of occupancy increased with increased water velocity. Juvenile lake sturgeon in the Detroit and St. Clair River ‘hot spots’ were captured at sites with mean benthic water velocities ranging from 0.20–0.60 m/s and where water depth was >7.3 m. Irrespective of waterbody, 69% of all juveniles were detected over dominant sand and gravel substrates. These results provide valuable insight about juvenile habitat use that can help managers formulate effective conservation and restoration strategies supporting the continued recovery of Great Lakes lake sturgeon.

Michigan↗
USGS2024

A video monitoring and computational system for estimating migratory juvenile fish abundance in river systems

Diadromous fishes migrate between marine and fresh waters for reproduction. For anadromous species, which spawn in freshwater, improved access to freshwater spawning and nursery habitats and ability of juveniles to emigrate to the ocean may support population recovery. Despite the potentially enormous influence of early life stage survival on adult population size, managers and scientists have limited capacity to assess numbers of juvenile anadromous fishes leaving freshwater ecosystems. Such data are critical for evaluating reproductive success and habitat suitability and have been identified as a top priority in anadromous fish research and management. We developed a state-of-the-art underwater video and computational system to collect videos to estimate abundances and migration timing for juvenile river herring ( Alosa pseudoharengus ; Alosa aestivalis ). We collected continuous video in the Monument River (Bourne, Massachusetts, USA) from June to November 2017. We trained three types of neural network models to detect and count fish in video frames and evaluated model performance by comparing human counts to model outputs. Our top model assessed presence and absence ( F 1 = 87%) and counted fish (counting error 9.4%) with an accuracy comparable to human counters ( F 1 = 88%). Our system's capability to collect accurate counts of emigrating juveniles will provide critical information that could be related to the numbers of spawning adults, system-specific productivity, and spawning and nursery habitat suitability. Both the video collection system and computational model may be transferrable to other sites and for other species where tracking juvenile emigration may inform management efforts.

Massachusetts↗
USGS2011

Spatial variation in fish species richness of the upper Mississippi River system

Important natural environmental gradients, including the connectivity of off-channel aquatic habitats to the main-stem river, have been lost in many reaches of the upper Mississippi River system, and an understanding of the consequences of this isolation is lacking in regard to native fish communities. The objectives of this study were to describe patterns of fish species richness, evenness, and diversity among representative habitats and river reaches and to examine the relationship between fish species richness and habitat diversity. Each year (1994-1999) fish communities of main-channel borders (MCB), side channel borders (SCB), and contiguous backwater shorelines (BWS) were sampled using boat-mounted electrofishing, mini-fyke-nets, tyke nets, hoop nets, and seines at a standardized number of sites. A total of 0.65 million fish were collected, representing 106 species from upper Mississippi River Pools 4, 8, 13, and 26; the open (unimpounded) river reach; and the La Grange Reach of the Illinois River. Within pools, species richness based on rarefaction differed significantly among habitats and was highest in BWS and lowest in MCB (P < 0.0001). At the reach scale, Pools 4, 8, and 13 consistently had the highest species richness and Pool 26, the open-river reach, and the La Grange Reach were significantly lower (P < 0.0001). Species evenness and diversity indices showed similar trends. The relationship between native fish species richness and habitat diversity was highly significant (r(2) = 0.85; P = 0.0091). These results support efforts aimed at the conservation and enhancement of connected side channels and backwaters. Although constrained by dams, pools with high native species richness could serve as a relative reference. The remnants of natural riverine dynamics that remain in these reaches should be preserved and enhanced; conditions could be used to guide restoration activities in more degraded reaches.

Illinois, Iowa, Minnesota, Missouri, Wisconsin↗
USGS2025

Angler dynamics in the St. Clair-Detroit River System after decades of change

Habitat and water quality were historically degraded within the St. Clair-Detroit River System (SCDRS). Beginning in 2004, extensive habitat restoration projects were implemented remediating losses of fish spawning beds and shoreline areas. Monitoring of post-restoration activities documented recovering fish populations; however, angler response remains unknown. Extensive creel surveys were conducted pre-restoration (2002–2004), but post-restoration (2012 and later) surveys were intermittent. The goal of this project was to examine both to create a comprehensive picture of the effects of restoration on angling. We calculated catch and harvest rates and inspected answers to supplemental questions collected by state and provincial agencies. We estimated economic impact of angling with a combination of lodging and gas expenses. Post-restoration, catch rates were higher, but harvest rates were variable for Lake St. Clair and the Detroit River. The 2017 open water boat fishery on Lake St. Clair was worth ∼$26 million. Increased fishing opportunities resulting from continued habitat and population recovery are leading to increased catch rates and likely attracting anglers to the area.

Michigan, Ontario↗
USGS2025

Effects of nest exclosure on nest and adult survival of piping plover (Charadrius melodus) in the lower Platte River System, Nebraska

Conservation of imperiled species often includes management strategies intended to improve specific vital rates. However, some management practices can have unforeseen consequences that negate the intended benefit. For example, nest exclosures are often used for ground-nesting avian species to reduce nest predation but may increase depredation of adults. Tradeoffs between nest survival and adult mortality of nest exclosures likely depend on local predator community dynamics. Therefore, investigations are most informative when assessed in specific settings. Piping Plovers ( Charadrius melodus , hereafter plovers) in the lower Platte River system, Nebraska, nest at off-river sandpit sites, which provide an additional study system and habitat to assess the context-dependent effects of nest exclosures. The Tern and Plover Conservation Partnership monitors plovers at off-river sites by monitoring nests, installing nest exclosures, and banding and resighting. Effects of nest exclosures were tested on both nest survival, from 340 plover nests from 2008–2024, and weekly within-season apparent survival, from 71 breeding adults from 2011–2024. There was weak evidence that nest exclosures marginally improved nest survival but no evidence of an effect for within-season survival of breeding adults. Daily nest survival was slightly higher for exclosed nests (0.99, [85% CI = 0.98–0.99]) than unexclosed nests (0.98, [0.98–0.99]). Within-season apparent weekly survival for breeding plovers was 0.90 (95% CI = 0.83–0.93); cumulative survival over the breeding period was 0.51 (0.33–0.69). Nest exclosures may be used to increase nest survival at off-river sites with minimal threat to adult survival unless considerable concerns arise.

Nebraska↗
USGS2002

Habitat and movement of lake sturgeon in the upper Mississippi River system, USA

Lake sturgeon Acipenser fluvescens , which are now protected from harvest, are considered rare in the upper Mississippi River and little information is available on the remaining populations. Transmitters were implanted into 31 lake sturgeon from two sites in the upper Mississippi River to describe their habitats and movement. The areas surrounding the tagging sites were core areas for both groups of lake sturgeon based on the high use (about 50% of locations by group) and frequent return to these areas by many of the tagged fish. Core areas contained sites with unique hydraulic characteristics, such that depositional substrates were common yet flow was present; these areas probably provide important feeding habitat for lake sturgeon. Minimal geographical overlap in range occurred between groups, suggesting that river reaches and associated core areas were unique to groups or substocks of fish. Lake sturgeon exhibited complex movement behaviors and had ranges of 3-198 km (median, 56 km) during the study. Tagged fish moved both downstream and upstream through upper Mississippi River navigation dams. However, dams appeared to be intermittent barriers to upstream passage because upstream passage events (10 fish, 19 passages) were fewer than downstream events (13 fish, 35 passages). Extensive use of the Wisconsin River by one group of lake sturgeon tagged in the upper Mississippi River has implications regarding management of a threatened population that transcends regulatory boundaries. Our study indicates that lake sturgeon in the upper Mississippi River system share many movement and habitat use characteristics with populations in other systems. However, significant data gaps preclude development of cogent management strategies, including information on population numbers and dynamics, identification of spawning areas, relations between groups, and assessment of the effects of commercial navigation.

Iowa, Minnesota, Wisconsin↗
USGS2014

Verifying success of artificial spawning reefs in the St. Clair-Detroit River System for lake sturgeon ( Acipenser fulvescens Rafinesque, 1817)

Lake sturgeon ( Acipenser fulvescens ) were historically abundant in the St. Clair &ndash; Detroit River System (SCDRS), a 160 km river/channel network. In the SCDRS, lake sturgeon populations have been negatively affected by the loss/degradation of natural spawning habitat. To address habitat loss for lake sturgeon and other species, efforts are underway to restore spawning substrate by constructing artificial reefs. The main objective of this study was to conduct post-construction monitoring of lake sturgeon egg deposition and larval emergence near two of these artificial reefs: Fighting Island Reef (FIR) in the Detroit River, and Middle Channel Reef in the St. Clair River. An additional site in the St. Clair River where lake sturgeon spawn on a coal clinker bed was also investigated. From 2010 to 2012, viable eggs and larvae were collected from all of these reefs, indicating that conditions are suitable for egg deposition, incubation, and larval emergence. In the St. Clair River, the results indicate the likelihood of other spawning sites upstream of these artificial reef sites.

Detroit River, St. Clair River↗
USGS2013

Size-dependent trophic patterns of pallid sturgeon and shovelnose sturgeon in a large river system

This study compared patterns of δ 15 N and δ 13 C enrichment of pallid sturgeon Scaphirhynchus albus and shovelnose sturgeon S. platorynchus in the Missouri River, United States, to infer their trophic position in a large river system. We examined enrichment and energy flow for pallid sturgeon in three segments of the Missouri River (Montana/North Dakota, Nebraska/South Dakota, and Nebraska/Iowa) and made comparisons between species in the two downstream segments (Nebraska/South Dakota and Nebraska/Iowa). Patterns in isotopic composition for pallid sturgeon were consistent with gut content analyses indicating an ontogenetic diet shift from invertebrates to fish prey at sizes of >500-mm fork length (FL) in all three segments of the Missouri River. Isotopic patterns revealed shovelnose sturgeon did not experience an ontogenetic shift in diet and used similar prey resources as small (<500-mm FL) pallid sturgeon in the two downstream segments. We found stable isotope analysis to be an effective tool for evaluating the trophic position of sturgeons within a large river food web.

Missouri River↗