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Archiving, processing, and disseminating ASTER products at the USGS EROS Data Center

The U.S. Geological Survey EROS Data Center archives, processes, and disseminates Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) data products. The ASTER instrument is one of five sensors onboard the Earth Observing System's Terra satellite launched December 18, 1999. ASTER collects broad spectral coverage with high spatial resolution at near infrared, shortwave infrared, and thermal infrared wavelengths with ground resolutions of 15, 30, and 90 meters, respectively. The ASTER data are used in many ways to understand local and regional earth-surface processes. Applications include land-surface climatology, volcanology, hazards monitoring, geology, agronomy, land cover change, and hydrology. The ASTER data are available for purchase from the ASTER Ground Data System in Japan and from the Land Processes Distributed Active Archive Center in the United States, which receives level 1A and level 1B data from Japan on a routine basis. These products are archived and made available to the public within 48 hours of receipt. The level 1A and level 1B data are used to generate higher level products that include routine and on-demand decorrelation stretch, brightness temperature at the sensor, emissivity, surface reflectance, surface kinetic temperature, surface radiance, polar surface and cloud classification, and digital elevation models. This paper describes the processes and procedures used to archive, process, and disseminate standard and on-demand higher level ASTER products at the Land Processes Distributed Active Archive Center.

Conference Paper

Digital image processing system For Landsat 3

The Department of Interior (DOI) and the National Aeronautics and Space Administration (NASA) have entered into a joint program to provide a digital image processing system in support of the Landsat 3 mission. NASA will provide the data reception and pre-processing facilities, while the DOI provides the production image processing system that generates film products and computer compatible tapes for users. The system procured by the DOI's U.S. Geological Survey was installed at the Earth Resources Observation System Data Center (EDC) in Sioux Falls, South Dakota. The EDC Digital Image Processing System (EDIPS) is capable of operating in standard or special formats. During 13 hours of operation, the system can process up to 200 five-band Multispectral Scanner (MSS) scenes and 160 Return Beam Vidicon (RBV) subscenes in the standard mode plus up to 60 scenes/subscenes in the special-order mode. The input media for the system are High Density Tapes (HDT's) generated by NASA's Goddard Space Flight Center (GSFC). These tapes contain two types of data: those that have been radiometrically and geometrically corrected with resampling of the data to fit a known map projection, and those that have been radiometrically corrected but have not been geometrically corrected or resampled. The system can provide 185 mm (MSS) and 198 mm (RBV) black and white film products for each MSS band or RBV subscene via a high resolution laser beam recorder. The CCT's generated by the system are compatible with the HDT format, and are available either in Band Sequential (BSQ) or Band Interleaved by Line (BIL) data. This paper will present both an overview of the total NASA/DOI system and a detailed discussion of the EDC Digital Image Processing System that is installed at the USGS facility in Sioux Falls, South Dakota.

South Dakota

The indication of Martian gully formation processes by slope-area analysis

The formation process of recent gullies on Mars is currently under debate. This study aims to discriminate between the proposed formation processes - pure water flow, debris flow and dry mass wasting - through the application of geomorphological indices commonly used in terrestrial geomorphology. High-resolution digital elevation models (DEMs) of Earth and Mars were used to evaluate the drainage characteristics of small slope sections. Data from Earth were used to validate the hillslope, debris-flow and alluvial process domains previously found for large fluvial catchments on Earth, and these domains were applied to gullied and ungullied slopes on Mars. In accordance with other studies, our results indicate that debris flow is one of the main processes forming the Martian gullies that were being examined. The source of the water is predominantly distributed surface melting, not an underground aquifer. Evidence is also presented indicating that other processes may have shaped Martian crater slopes, such as ice-assisted creep and solifluction, in agreement with the proposed recent Martian glacial and periglacial climate. Our results suggest that, within impact craters, different processes are acting on differently oriented slopes, but further work is needed to investigate the potential link between these observations and changes in Martian climate.

Geological Society Special Publication

Processes that initiate turbidity currents and their influence on turbidites: A marine geology perspective

How the processes that initiate turbidity currents influence turbidite deposition is poorly understood, and many discussions in the literature rely on concepts that are overly simplistic. Marine geological studies provide information on the initiation and flow path of turbidity currents, including their response to gradient. In case studies of late Quaternary turbidites on the eastern Canadian and western U.S. margins, initiation processes are inferred either from real-time data for historical flows or indirectly from the age and contemporary paleogeography, erosional features, and depositional record. Three major types of initiation process are recognized: transformation of failed sediment, hyperpycnal flow from rivers or ice margins, and resuspension of sediment near the shelf edge by oceanographic processes. Many high-concentration flows result from hyperpycnal supply of hyperconcentrated bedload, or liquefaction failure of coarse-grained sediment, and most tend to deposit in slope conduits and on gradients < 0.5° at the base of slope and on the mid fan. Highly turbulent flows, from transformation of retrogressive failures and from ignitive flows that are triggered by oceanographic processes, tend to cannibalize these more proximal sediments and redeposit them on lower gradients on the basin plain. Such conduit flushing provides most of the sediment in large turbidites. Initiation mechanism exerts a strong control on the duration of turbidity flows. In most basins, there is a complex feedback between different types of turbidity-current initiation, the transformation of the flows, and the associated slope morphology. As a result, there is no simple relationship between initiating process and type of deposit.

Journal of Sedimentary Research

Coastal landforms and processes at the Cape Cod National Seashore, Massachusetts—A primer

Anyone who spends more than a few days on Cape Cod (the Cape) quickly becomes a coastal geologist, quickly learning the rhythms of daily tides and the seasonal cycles of beaches growing and being swept away by storms; swimmers and surfers track how the breakers appear, and dog-walkers notice the hard-packed sand blanketed overnight by an airy layer that leaves deep labored tracks. Careful observers whose paths wander to the ocean&rsquo;s edge will observe many of the landforms and coastal processes described in this book and if we have done our job well, the stories told here will seem familiar. Watchful experience brings insights; indeed, this is how scientists and perhaps how artists work, describing patterns that explain and predict. When is the next high tide? What will the winter bring? Where do we build, fish, swim? How do wind and waves offshore in the North Atlantic help arrange the plants and dunes and hollows on the beach? And most of all, as human animals drawn to live and play on the edge of the ocean, how do we get the benefits of this complex natural system of geology and biology? How do we affect coastal processes; how is the coast changing now and how is the coast likely to change in years ahead with climate warming and climate change? This book is about the highly dynamic coastal landforms of Cape Cod&mdash;the beaches, bluffs, spits, dunes, barrier beaches, estuaries, and salt marshes. What they are, why they are where they are, how they behave with respect to the greater Cape Cod coastal system&mdash;how the landforms respond to day-to-day and long-term geologic processes, such as waves and currents, change in sediment transport, relative sea-level rise, and meteorological processes such as hurricanes, nor&rsquo;easters, and cold front passages. It is also about how the landforms got to be where they are and the way they are and where they are headed in the near future with the predicted effects of global climate warming and change. Our objective is to provide a single source of understandable and readable scientific information for those who live, play, and work on outer Cape Cod and at the Cape Cod National Seashore, as well as to provide an introduction to Cape Cod&rsquo;s coastal landforms for anyone with an interest in Earth science and nature who wants a better understanding of coastal systems and processes. Basic to an understanding of coastal landforms is the fact that they work together&mdash;they interact&mdash;as elements of many systems, and therefore our ultimate concern is not the individual landform itself but rather the geologic systems that make up Cape Cod and the Cape Cod National Seashore. Much of this discussion can be applied as well to Nantucket, Martha&rsquo;s Vineyard, and other coastal regions. The coast of outer Cape Cod, about 15,000 years old and about 30 miles (mi; 50 kilometers [km]) long, is but a tiny piece of the global Earth system that operates within a much larger realm of space and time. Cape Cod&rsquo;s coastal landforms are temporary holding patterns within a continual interplay of land, sea, atmosphere, climate, ice, and life, including a variety of human activities that both affect and are affected by these processes. These interactions produce the landforms, and the landforms alter the interactions. The resulting landforms provide habitats for a wide variety of coastal plants and animals. The habitats along with their inhabitants and the interacting environmental factors controlling them constitute the Cape&rsquo;s complex and varied ecosystems. But for now, we are here to enjoy it. We welcome you to delight and wonder at the perpetually changing handshake between the ocean and shore at New England&rsquo;s Great Beach.

Massachusetts

Beowulf Distributed Processing and the United States Geological Survey

Introduction In recent years, the United States Geological Survey's (USGS) National Mapping Discipline (NMD) has expanded its scientific and research activities. Work is being conducted in areas such as emergency response research, scientific visualization, urban prediction, and other simulation activities. Custom-produced digital data have become essential for these types of activities. High-resolution, remotely sensed datasets are also seeing increased use. Unfortunately, the NMD is also finding that it lacks the resources required to perform some of these activities. Many of these projects require large amounts of computer processing resources. Complex urban-prediction simulations, for example, involve large amounts of processor-intensive calculations on large amounts of input data. This project was undertaken to learn and understand the concepts of distributed processing. Experience was needed in developing these types of applications. The idea was that this type of technology could significantly aid the needs of the NMD scientific and research programs. Porting a numerically intensive application currently being used by an NMD science program to run in a distributed fashion would demonstrate the usefulness of this technology. There are several benefits that this type of technology can bring to the USGS's research programs. Projects can be performed that were previously impossible due to a lack of computing resources. Other projects can be performed on a larger scale than previously possible. For example, distributed processing can enable urban dynamics research to perform simulations on larger areas without making huge sacrifices in resolution. The processing can also be done in a more reasonable amount of time than with traditional single-threaded methods (a scaled version of Chester County, Pennsylvania, took about fifty days to finish its first calibration phase with a single-threaded program). This paper has several goals regarding distributed processing technology. It will describe the benefits of the technology. Real data about a distributed application will be presented as an example of the benefits that this technology can bring to USGS scientific programs. Finally, some of the issues with distributed processing that relate to USGS work will be discussed.

Open-File Report

Integrating Stakeholders and Users into the Geography Discipline's Research Process

Future research priorities of Geography emphasize the discipline's leadership role in the U.S. Geological Survey (USGS) in multidisciplinary and integrated research on human and environmental systems and how these systems are interrelated and respond to change Geography's research priorities also emphasize providing science that is usable to society and creating decision support products applicable to given customer problems. To achieve these goals, we must understand the relationship between our research and our customer, and how to integrate the customer into the research process. This report details the elements of the research process that help achieve the degree of stakeholder involvement necessary to ensure a successful end-product. It offers suggestions that can help researchers better understand stakeholders and customers and involve them in the research process more effectively, while preserving the integrity of the science. Its aim is to help researchers understand the problems and challenges faced by our customers and communicate the ways in which Geography can help address their problems. Adopting these guidelines can improve the efficiency of the research process and lead to higher quality output. We will be able to conduct better research because we will have an improved understanding of the research problem and the stakeholders involved. This report covers a broad range of topics, from identifying and communicating with stakeholders and users, to the use of language, to how to effectively present scientific information to the user. It does not offer a 'one size fits all' method. Instead, perhaps only specific sections are suitable for a given project and customers, depending on project scope and needs. This report is based on the objectives of Geography's strategic plan, U. S. Geological Survey's strategic plan, and Department of Interior's strategic plan. Section 2 of these guidelines describes the purpose of the research process in Geography and the need for better user involvement in the process. Section 3 explains how to conduct a stakeholder analysis. Section 4 explains how to conduct a user-needs assessment.

Open-File Report

Field guide for collecting and processing stream-water samples for the National Water-Quality Assessment Program

The U.S. Geological Survey's National Water-Quality Assessment program includes extensive data- collection efforts to assess the quality of the Nations's streams. These studies require analyses of stream samples for major ions, nutrients, sediments, and organic contaminants. For the information to be comparable among studies in different parts of the Nation, consistent procedures specifically designed to produce uncontaminated samples for trace analysis in the laboratory are critical. This field guide describes the standard procedures for collecting and processing samples for major ions, nutrients, organic contaminants, sediment, and field analyses of conductivity, pH, alkalinity, and dissolved oxygen. Samples are collected and processed using modified and newly designed equipment made of Teflon to avoid contamination, including nonmetallic samplers (D-77 and DH-81) and a Teflon sample splitter. Field solid-phase extraction procedures developed to process samples for organic constituent analyses produce an extracted sample with stabilized compounds for more accurate results. Improvements to standard operational procedures include the use of processing chambers and capsule filtering systems. A modified collecting and processing procedure for organic carbon is designed to avoid contamination from equipment cleaned with methanol. Quality assurance is maintained by strict collecting and processing procedures, replicate sampling, equipment blank samples, and a rigid cleaning procedure using detergent, hydrochloric acid, and methanol.

Open-File Report

Development of the Hydroecological Integrity Assessment Process for Determining Environmental Flows for New Jersey Streams

The natural flow regime paradigm and parallel stream ecological concepts and theories have established the benefits of maintaining or restoring the full range of natural hydrologic variation for physiochemical processes, biodiversity, and the evolutionary potential of aquatic and riparian communities. A synthesis of recent advances in hydroecological research coupled with stream classification has resulted in a new process to determine environmental flows and assess hydrologic alteration. This process has national and international applicability. It allows classification of streams into hydrologic stream classes and identification of a set of non-redundant and ecologically relevant hydrologic indices for 10 critical sub-components of flow. Three computer programs have been developed for implementing the Hydroecological Integrity Assessment Process (HIP): (1) the Hydrologic Indices Tool (HIT), which calculates 171 ecologically relevant hydrologic indices on the basis of daily-flow and peak-flow stream-gage data; (2) the New Jersey Hydrologic Assessment Tool (NJHAT), which can be used to establish a hydrologic baseline period, provide options for setting baseline environmental-flow standards, and compare past and proposed streamflow alterations; and (3) the New Jersey Stream Classification Tool (NJSCT), designed for placing unclassified streams into pre-defined stream classes. Biological and multivariate response models including principal-component, cluster, and discriminant-function analyses aided in the development of software and implementation of the HIP for New Jersey. A pilot effort is currently underway by the New Jersey Department of Environmental Protection in which the HIP is being used to evaluate the effects of past and proposed surface-water use, ground-water extraction, and land-use changes on stream ecosystems while determining the most effective way to integrate the process into ongoing regulatory programs. Ultimately, this scientifically defensible process will help to quantify the effects of anthropogenic changes and development on hydrologic variability and help planners and resource managers balance current and future water requirements with ecological needs.

Scientific Investigations Report

Identifying Hydrologic Processes in Agricultural Watersheds Using Precipitation-Runoff Models

Understanding the fate and transport of agricultural chemicals applied to agricultural fields will assist in designing the most effective strategies to prevent water-quality impairments. At a watershed scale, the processes controlling the fate and transport of agricultural chemicals are generally understood only conceptually. To examine the applicability of conceptual models to the processes actually occurring, two precipitation-runoff models - the Soil and Water Assessment Tool (SWAT) and the Water, Energy, and Biogeochemical Model (WEBMOD) - were applied in different agricultural settings of the contiguous United States. Each model, through different physical processes, simulated the transport of water to a stream from the surface, the unsaturated zone, and the saturated zone. Models were calibrated for watersheds in Maryland, Indiana, and Nebraska. The calibrated sets of input parameters for each model at each watershed are discussed, and the criteria used to validate the models are explained. The SWAT and WEBMOD model results at each watershed conformed to each other and to the processes identified in each watershed's conceptual hydrology. In Maryland the conceptual understanding of the hydrology indicated groundwater flow was the largest annual source of streamflow; the simulation results for the validation period confirm this. The dominant source of water to the Indiana watershed was thought to be tile drains. Although tile drains were not explicitly simulated in the SWAT model, a large component of streamflow was received from lateral flow, which could be attributed to tile drains. Being able to explicitly account for tile drains, WEBMOD indicated water from tile drains constituted most of the annual streamflow in the Indiana watershed. The Nebraska models indicated annual streamflow was composed primarily of perennial groundwater flow and infiltration-excess runoff, which conformed to the conceptual hydrology developed for that watershed. The hydrologic processes represented in the parameter sets resulting from each model were comparable at individual watersheds, but varied between watersheds. The models were unable to show, however, whether hydrologic processes other than those included in the original conceptual models were major contributors to streamflow. Supplemental simulations of agricultural chemical transport could improve the ability to assess conceptual models.

Scientific Investigations Report

The use of process models to inform and improve statistical models of nitrate occurrence, Great Miami River Basin, southwestern Ohio

Statistical models of nitrate occurrence in the glacial aquifer system of the northern United States, developed by the U.S. Geological Survey, use observed relations between nitrate concentrations and sets of explanatory variables—representing well-construction, environmental, and source characteristics— to predict the probability that nitrate, as nitrogen, will exceed a threshold concentration. However, the models do not explicitly account for the processes that control the transport of nitrogen from surface sources to a pumped well and use area-weighted mean spatial variables computed from within a circular buffer around the well as a simplified source-area conceptualization. The use of models that explicitly represent physical-transport processes can inform and, potentially, improve these statistical models. Specifically, groundwater-flow models simulate advective transport—predominant in many surficial aquifers— and can contribute to the refinement of the statistical models by (1) providing for improved, physically based representations of a source area to a well, and (2) allowing for more detailed estimates of environmental variables. A source area to a well, known as a contributing recharge area, represents the area at the water table that contributes recharge to a pumped well; a well pumped at a volumetric rate equal to the amount of recharge through a circular buffer will result in a contributing recharge area that is the same size as the buffer but has a shape that is a function of the hydrologic setting. These volume-equivalent contributing recharge areas will approximate circular buffers in areas of relatively flat hydraulic gradients, such as near groundwater divides, but in areas with steep hydraulic gradients will be elongated in the upgradient direction and agree less with the corresponding circular buffers. The degree to which process-model-estimated contributing recharge areas, which simulate advective transport and therefore account for local hydrologic settings, would inform and improve the development of statistical models can be implicitly estimated by evaluating the differences between explanatory variables estimated from the contributing recharge areas and the circular buffers used to develop existing statistical models. The larger the difference in estimated variables, the more likely that statistical models would be changed, and presumably improved, if explanatory variables estimated from contributing recharge areas were used in model development. Comparing model predictions from the two sets of estimated variables would further quantify—albeit implicitly—how an improved, physically based estimate of explanatory variables would be reflected in model predictions. Differences between the two sets of estimated explanatory variables and resultant model predictions vary spatially; greater differences are associated with areas of steep hydraulic gradients. A direct comparison, however, would require the development of a separate set of statistical models using explanatory variables from contributing recharge areas. Area-weighted means of three environmental variables—silt content, alfisol content, and depth to water from the U.S. Department of Agriculture State Soil Geographic (STATSGO) data—and one nitrogen-source variable (fertilizer-application rate from county data mapped to Enhanced National Land Cover Data 1992 (NLCDe 92) agricultural land use) can vary substantially between circular buffers and volume-equivalent contributing recharge areas and among contributing recharge areas for different sets of well variables. The differences in estimated explanatory variables are a function of the same factors affecting the contributing recharge areas as well as the spatial resolution and local distribution of the underlying spatial data. As a result, differences in estimated variables between circular buffers and contributing recharge areas are complex and site specific as evidenced by differences in estimated variables for circular buffers and contributing recharge areas of existing public-supply and network wells in the Great Miami River Basin. Large differences in areaweighted mean environmental variables are observed at the basin scale, determined by using the network of uniformly spaced hypothetical wells; the differences have a spatial pattern that generally is similar to spatial patterns in the underlying STATSGO data. Generally, the largest differences were observed for area-weighted nitrogen-application rate from county and national land-use data; the basin-scale differences ranged from -1,600 (indicating a larger value from within the volume-equivalent contributing recharge area) to 1,900 kilograms per year (kg/yr); the range in the underlying spatial data was from 0 to 2,200 kg/yr. Silt content, alfisol content, and nitrogen-application rate are defined by the underlying spatial data and are external to the groundwater system; however, depth to water is an environmental variable that can be estimated in more detail and, presumably, in a more physically based manner using a groundwater-flow model than using the spatial data. Model-calculated depths to water within circular buffers in the Great Miami River Basin differed substantially from values derived from the spatial data and had a much larger range. Differences in estimates of area-weighted spatial variables result in corresponding differences in predictions of nitrate occurrence in the aquifer. In addition to the factors affecting contributing recharge areas and estimated explanatory variables, differences in predictions also are a function of the specific set of explanatory variables used and the fitted slope coefficients in a given model. For models that predicted the probability of exceeding 1 and 4 milligrams per liter as nitrogen (mg/L as N), predicted probabilities using variables estimated from circular buffers and contributing recharge areas generally were correlated but differed significantly at the local and basin scale. The scale and distribution of prediction differences can be explained by the underlying differences in the estimated variables and the relative weight of the variables in the statistical models. Differences in predictions of exceeding 1 mg/L as N, which only includes environmental variables, generally correlated with the underlying differences in STATSGO data, whereas differences in exceeding 4 mg/L as N were more spatially extensive because that model included environmental and nitrogen-source variables. Using depths to water from within circular buffers derived from the spatial data and depths to water within the circular buffers calculated from the groundwater-flow model, restricted to the same range, resulted in large differences in predicted probabilities. The differences in estimated explanatory variables between contributing recharge areas and circular buffers indicate incorporation of physically based contributing recharge area likely would result in a different set of explanatory variables and an improved set of statistical models. The use of a groundwater-flow model to improve representations of source areas or to provide more-detailed estimates of specific explanatory variables includes a number of limitations and technical considerations. An assumption in these analyses is that (1) there is a state of mass balance between recharge and pumping, and (2) transport to a pumped well is under a steady state flow field. Comparison of volumeequivalent contributing recharge areas under steady-state and transient transport conditions at a location in the southeastern part of the basin shows the steady-state contributing recharge area is a reasonable approximation of the transient contributing recharge area after between 10 and 20 years of pumping. The first assumption is a more important consideration for this analysis. A gradient effect refers to a condition where simulated pumping from a well is less than recharge through the corresponding contributing recharge area. This generally takes place in areas with steep hydraulic gradients, such as near discharge locations, and can be mitigated using a finer model discretization. A boundary effect refers to a condition where recharge through the contributing recharge area is less than pumping. This indicates other sources of water to the simulated well and could reflect a real hydrologic process. In the Great Miami River Basin, large gradient and boundary effects—defined as the balance between pumping and recharge being less than half—occurred in 5 and 14 percent of the basin, respectively. The agreement between circular buffers and volume-equivalent contributing recharge areas, differences in estimated variables, and the effect on statisticalmodel predictions between the population of wells with a balance between pumping and recharge within 10 percent and the population of all wells were similar. This indicated process-model limitations did not affect the overall findings in the Great Miami River Basin; however, this would be model specific, and prudent use of a process model needs to entail a limitations analysis and, if necessary, alterations to the model.

Ohio

MODFLOW–USG version 1: An unstructured grid version of MODFLOW for simulating groundwater flow and tightly coupled processes using a control volume finite-difference formulation

A new version of MODFLOW, called MODFLOW–USG (for UnStructured Grid), was developed to support a wide variety of structured and unstructured grid types, including nested grids and grids based on prismatic triangles, rectangles, hexagons, and other cell shapes. Flexibility in grid design can be used to focus resolution along rivers and around wells, for example, or to subdiscretize individual layers to better represent hydrostratigraphic units. MODFLOW–USG is based on an underlying control volume finite difference (CVFD) formulation in which a cell can be connected to an arbitrary number of adjacent cells. To improve accuracy of the CVFD formulation for irregular grid-cell geometries or nested grids, a generalized Ghost Node Correction (GNC) Package was developed, which uses interpolated heads in the flow calculation between adjacent connected cells. MODFLOW–USG includes a Groundwater Flow (GWF) Process, based on the GWF Process in MODFLOW–2005, as well as a new Connected Linear Network (CLN) Process to simulate the effects of multi-node wells, karst conduits, and tile drains, for example. The CLN Process is tightly coupled with the GWF Process in that the equations from both processes are formulated into one matrix equation and solved simultaneously. This robustness results from using an unstructured grid with unstructured matrix storage and solution schemes. MODFLOW–USG also contains an optional Newton-Raphson formulation, based on the formulation in MODFLOW–NWT, for improving solution convergence and avoiding problems with the drying and rewetting of cells. Because the existing MODFLOW solvers were developed for structured and symmetric matrices, they were replaced with a new Sparse Matrix Solver (SMS) Package developed specifically for MODFLOW–USG. The SMS Package provides several methods for resolving nonlinearities and multiple symmetric and asymmetric linear solution schemes to solve the matrix arising from the flow equations and the Newton-Raphson formulation, respectively.

Techniques and Methods

Geochemistry of the processes that attenuate acid mine drainage in wetlands

Because conventional treatment of acid-mine drainage (AMD) involves installation and maintenance of water treatment plants, regulators and mine operators have sought lower cost and lower maintenance technologies. One ecological engineering technology that has received increasing research attention is the use of natural and constructed wetlands for remediation of some of the water-quality problems associated with AMD. As surface water flows through a wetland, several processes can occur to decrease the elevated concentrations of sulfate, trace metals, arsenic, and hydrogen ions that characterize AMD. These processes range from precipitation of mineral phases to the active uptake of solutes by vegetation. The relative importance of these processes between different wetlands depends on the hydrologic and geochemical characteristics of the wetlands. This paper describes the geochemistry of the processes that contribute to AMD attenuation in wetlands and presents some of the case studies that have identified these processes. The attenuation of AMD in wetlands has been studied in natural and in man- made (constructed) wetlands. In this paper, case studies of both are presented. A discussion of some of the general characteristics of wetlands is followed by more detailed discussions of the processes and geochemistry that contribute to the treatment of AMD in wetlands, relevant case studies, and a brief discussion of constructed wetland design. The physical, chemical, and hydrologic characteristics of a wetland that affect its potential for supporting specific types of reactions are also emphasized.

Book chapter

Fluvial processes in geomorphology

This excellent text is a pioneering work in the study of landform development under processes associated with running water. Its primary emphasis is on subjects that were the focus of the authors' studies in both field and laboratory. Part I deals with the process of change in the evolving landscape. Part II explores process and form, and Part III, the effects of time. In Part I, the relation of geomorphology to field problems is analyzed in studies of a mountain block in a semiarid climate, a meandering river cut into bedrock, and benches along a sea coast. Part Two contains studies of weathering, climate, and such denudational processes as flooding and erosion. Here, too, are examinations of the drainage basin as a geomorphic unit, water and sediment in channels, channel form and process, and hillslope characteristics and processes. In Part III, the authors cover geochronology, drainage pattern evolution, channel changes with time, and the evolution of hillslopes. Two appendixes will help readers convert units and equivalents, and identify symbols and nomenclature.

Book

Sediment sources and connectivity linked to hydrologic pathways and geomorphic processes: A conceptual model to specify sediment sources and pathways through space and time

Sediment connectivity is a framework for transfer and storage of sediment among different geomorphic compartments across upland and channel network of the catchment sediment cascade. Sediment connectivity and dysconnectivity (i.e., source delivery and storage processes) are linked to the water cycle and hydrologic systems with the associated multiscale interactions with climate, soil, topography, ecology, and landuse/landcover under natural variability and human intervention. We review the sediment connectivity concept and frameworks developed in the last few decades to examine and quantify water and sediment transfer in catchment systems. Past conceptual models of connectivity have attempted to integrate multiple processes into sediment domain, including geomorphic, hydrologic, and ecological processes (i.e., “holistic approach to connectivity”). In particular, multiple studies highlight the importance of sediment and water interaction in defining landscape connectivity. There are also efforts to quantify the topographic controls on sediment connectivity, in the advent of increasingly high-resolution digital terrain models. More recent modeling efforts have integrated structural and functional connectivity through coupling topographic information with hydrologic simulation models. Though this recent modeling development is encouraging, a comprehensive sediment connectivity framework that integrates geomorphic and hydrologic processes across spatiotemporal scales is yet to be conceived. Such an effort will require understanding the governing hydrologic and geomorphic processes that control sediment source, storage, and transport. A conceptual model is proposed to describe dominant hydrologic-sediment connectivity regimes through spatial-temporal feedbacks between hydrologic processes (rainfall, flow routing, and water residence time) and geomorphic drivers (upland soil erosion and deposition, and geomorphic channel erosion and deposition response). Recent advancements in landscape monitoring techniques using geochemical tracers, remote-sensing, increasing availability of hydrologic monitoring data, and the integration of various analytic methods (e.g., isotopic hydrograph separation, stormflow concentration-discharge, hysteretic behavior analysis) have the potential to broaden the spatial and temporal scales of geomorphic observations and understanding of landscape sediment connectivity. Using the conceptual model as a “thinking” space, we examine sediment and hydrologic interactions in real world examples of watershed studies using multiple lines of evidence and modeling techniques.

Conference Paper

Velocity Mapping Toolbox (VMT): a processing and visualization suite for moving-vessel ADCP measurements

The use of acoustic Doppler current profilers (ADCP) for discharge measurements and three-dimensional flow mapping has increased rapidly in recent years and has been primarily driven by advances in acoustic technology and signal processing. Recent research has developed a variety of methods for processing data obtained from a range of ADCP deployments and this paper builds on this progress by describing new software for processing and visualizing ADCP data collected along transects in rivers or other bodies of water. The new utility, the Velocity Mapping Toolbox (VMT), allows rapid processing (vector rotation, projection, averaging and smoothing), visualization (planform and cross-section vector and contouring), and analysis of a range of ADCP-derived datasets. The paper documents the data processing routines in the toolbox and presents a set of diverse examples that demonstrate its capabilities. The toolbox is applicable to the analysis of ADCP data collected in a wide range of aquatic environments and is made available as open-source code along with this publication.

Earth Surface Processes and Landforms

Nitrogen cycling processes and microbial community composition in bed sediments in the Yukon River at Pilot Station

Information on the contribution of nitrogen (N)-cycling processes in bed sediments to river nutrient fluxes in large northern latitude river systems is limited. This study examined the relationship between N-cycling processes in bed sediments and N speciation and loading in the Yukon River near its mouth at the Bering Sea. We conducted laboratory bioassays to measure N-cycling processes in sediment samples collected over distinct water cycle seasons. In conjunction, the microbial community composition in the bed sediments using genes involved in N-cycling ( narG , napA , nosZ , and amoA ) and 16S rRNA gene pyrosequences was examined. Temporal variation was observed in net N mineralization, nitrate uptake, and denitrification rate potentials and correlated strongly with sediment carbon (C) and extractable N content and microbial community composition rather than with river water nutrient concentrations. The C content of the bed sediment was notably impacted by the spring flood, ranging from 1.1% in the midst of an ice-jam to 0.1% immediately after ice-out, suggesting a buildup of organic material (OM) prior to scouring of the bed sediments during ice break up. The dominant members of the microbial community that explained differences in N-processing rates belonged to the genera Crenothrix , Flavobacterium , and the family of Comamonadaceae. Our results suggest that biogeochemical processing rates in the bed sediments appear to be more coupled to hydrology, nutrient availability in the sediments, and microbial community composition rather than river nutrient concentrations at Pilot Station.

Alaska

Evaluating landscape health: Integrating societal goals and biophysical process

Evaluating landscape change requires the integration of the social and natural sciences. The social sciences contribute to articulating societal values that govern landscape change, while the natural sciences contribute to understanding the biophysical processes that are influenced by human activity and result in ecological change. Building upon Aldo Leopold's criteria for landscape health, the roles of societal values and biophysical processes in shaping the landscape are explored. A framework is developed for indicators of landscape health and integrity. Indicators of integrity are useful in measuring biological condition relative to the condition in landscapes largely unaffected by human activity, while indicators of health are useful in evaluating changes in highly modified landscapes. Integrating societal goals and biophysical processes requires identification of ecological services to be sustained within a given landscape. It also requires the proper choice of temporal and spatial scales. Societal values are based upon inter-generational concerns at regional scales (e.g. soil and ground water quality). Assessing the health and integrity of the environment at the landscape scale over a period of decades best integrates societal values with underlying biophysical processes. These principles are illustrated in two contrasting case studies: (1) the South Platte River study demonstrates the role of complex biophysical processes acting at a distance; and (2) the Kissimmee River study illustrates the critical importance of social, cultural and economic concerns in the design of remedial action plans. In both studies, however, interactions between the social and the biophysical governed the landscape outcomes. The legacy of evolution and the legacy of culture requires integration for the purpose of effectively coping with environmental change.

Journal of Environmental Management