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Distribution and transport of Olympia oyster, Ostrea lurida, larvae in northern Puget Sound, Washington, USA

As efforts for restoring Olympia oyster (Ostrea lurida) populations have expanded, there is an increased need to understand local factors that could influence the long-term success of these projects. To address concerns over potential limitations to recruitment at a restoration site in northern Puget Sound, Washington, USA, a study was developed to characterize physical processes governing larval transport in conjunction with larval abundance and environmental factors. Larval presence was not associated with tide cycle, season, or a combination of tide cycle and season. In terms of location, larvae were more likely to be present at offshore and intertidal sites versus the estuarine lagoon where the adult population resides. Larval density was higher during late summer ebbs versus early summer floods. Across sampling dates and locations, larval sizes ranged from 184 to 263 µm, indicating that larvae were released into the water column throughout the reproductive season and retained in the embayment for at least ~16 days. Throughout different tidal cycles in Skagit Bay, acoustic Doppler current profilers were used to measure current direction and velocities, concurrent with plankton sampling. Surface currents in the study area alternated between a clockwise and counterclockwise gyre during initial ebb and flood tides, respectively. Larvae exported from the source population during initial to mid-ebbs are swept into a northward gyre, and potentially retained at intertidal sites alongshore. These results will provide resource managers attempting to restore native bivalves with the ability to expand populations by identifying optimal areas for habitat enhancement through natural recruitment.

Washington↗

The Chesapeake Bay Land Change Model (CBLCM): Simulating future land use scenarios and potential impacts on water quality

The Chesapeake Bay Land Change Model (CBLCM) is an open-source pseudo-cellular automata land change model tailored for loose coupling with watershed models. The CBLCM simulates infill development, residential and commercial development, natural land and agricultural land conversion, and growth served by sewer or septic wastewater treatment. The CBLCM is unique among land change models by simulating multiple types of development and explicitly accounting for infill development and the spatial patterns of development densities. The CBLCM was used to simulate five future land use scenarios, holding population constant, for all counties within and adjacent to the Chesapeake Bay watershed from 2013 to 2055. Results are presented here for the state of Maryland over the period 2013–2025 to illustrate model functionality and validation. The growth management (GM) scenario achieved the least development and potential impacts to natural and agricultural lands while accommodating the same amount of population growth as the other four scenarios. Scenarios focusing exclusively on natural or agricultural land protection shifted development to unprotected areas resulting in unforeseen water quality consequences. Simultaneously achieving more compact development while protecting the most valued natural and agricultural lands requires a combination of GM and land conservation policies and actions.

Maryland↗

A database of natural monthly streamflow estimates from 1950 to 2015 for the conterminous United States

Quantifying and understanding the natural streamflow regime, defined as expected streamflow that would occur in the absence of anthropogenic modification to the hydrologic system, is critically important for the development of management strategies aimed at protecting aquatic ecosystems. Water balance models have been applied frequently to estimate natural flows, but are limited in the number of predictor variables that can be included. Here, a statistical machine learning technique — random forest modeling — was applied to estimate natural flows at a monthly time‐step from 1950 to 2015 for >2.5 million stream reaches in the conterminous United States (U.S.) using 200 potential predictor variables. We describe the development and documentation of this dataset and assess model performance. Model fit statistics (mean Nash–Sutcliffe efficiency = 0.85; observed/expected ratio = 0.94) indicate good correspondence between predicted and observed flows at nearly 2,000 streamgages. As an example application of the dataset, the observed streamflow record at a site prior to and after the construction of an upstream reservoir was compared with estimated natural flows to demonstrate the magnitude of seasonal depletions in streamflow due to the reservoir. This dataset can be applied to quantify natural and anthropogenic processes contributing to streamflow depletion or augmentation, and assess associated ecological effects.

Journal of the American Water Resources Associatio↗

Synthesis of common management concerns associated with dam removal

Managers make decisions regarding if and how to remove dams in spite of uncertainty surrounding physical and ecological responses, and stakeholders often raise concerns about certain negative effects, regardless of whether or not these concerns are warranted at a particular site. We used a dam-removal science database supplemented with other information sources to explore seven frequently-raised concerns, herein Common Management Concerns (CMCs). We investigate the occurrence of these concerns and the contributing biophysical controls. The CMCs addressed are: degree and rate of reservoir sediment erosion, excessive channel incision upstream of reservoirs, downstream sediment aggradation, elevated downstream turbidity, drawdown impacts on local water infrastructure, colonization of reservoir sediments by non-native plants, and expansion of invasive fish. Biophysical controls emerged for some of the concerns, providing managers with information to assess whether a given concern is likely to occur at a site. To fully assess CMC risk, managers should concurrently evaluate site conditions and identify the ecosystem or human uses that will be negatively affected if the biophysical phenomenon producing the CMC occurs. We show how many CMCs have one or more controls in common, facilitating the identification of multiple risks at a site, and demonstrate why CMC risks should be considered in the context of other factors like natural watershed variability and disturbance history.

Journal of the American Water Resources Associatio↗

QuickBird satellite imagery as a tool for restoration and rehabilitation of Lake Sevan, Armenia

Lake Sevan in Armenia is the largest freshwater lake in the Transcaucasus region and is one of the largest high-altitude freshwater lakes in Eurasia (Babayan et al., 2006 ). Armenia is a small (29,743 km 2 ), land- locked country that is comparatively poor in natural resources and nearly surrounded by borders that are blockaded by its neighbors (Babayan et al., 2006 ; Rhoades, 2008 and references therein; CIA, 2010 ). Despite these obstacles, ecological research and environmental restoration efforts continue. For the most part, ecological research in Lake Sevan during the twentieth century was restricted to Soviet-era journals, or was otherwise unavailable to western scientists.

Lake Sevan↗

Coordinated bird monitoring: Technical recommendations for military lands

The Department of Defense (DoD) is subject to several rules and regulations establishing responsibilities for monitoring migratory birds. The Sikes Act requires all military installations with significant natural resources to prepare and implement Integrated Natural Resources Management Plans (INRMPs). These plans guide the conservation and long-term management of natural resources on military lands in a manner that is compatible with and sustains the military mission. An INRMP also supports compliance with all legal requirements and guides the military in fulfilling its obligation to be a good steward of public land.The management and conservation of migratory birds is addressed in installation INRMPs. The National Environmental Policy Act (NEPA) requires federal agencies to evaluate and disclose the potential environmental impacts of their proposed actions. More recently, DoD signed an MOU (http://www.dodpif.org/downloads/EO13186_MOU-DoD.pdf) for migratory birds, under Executive Order 13186, with the US Fish and Wildlife Service (USFWS) in July 2006 and a Migratory Bird Rule (http://www.dodpif.org/downloads/MigBirdFINALRule_FRFeb2007.pdf) was passed by Congress in February 2007. The Migratory Bird Rule addresses the potential impacts of military readiness activities on populations of migratory birds and establishes a process to implement conservation measures if and when a military readiness activity is expected to have a significant adverse impact on a population of migratory bird species (as determined through the NEPA process). The MOU states that for nonmilitary readiness activities, prior to initiating any activity likely to affect populations of migratory birds DoD shall (1) identify the migratory bird species likely to occur in the area of the proposed action and determine if any species of concern could be affected by the activity, and (2) assess and document, using NEPA when applicable, the effect of the proposed action on species of concern. By following these procedures, DoD will minimize the possibility for a proposed action to unintentionally take migratory birds at a level that would violate any of the migratory bird treaties and potentially impact mission activities. In addition, implementing conservation and monitoring programs for migratory birds supports the ecosystem integrity necessary to sustain DoD's natural resources for the military mission.Non-compliance with the procedural requirements of the MBTA could result in a private party lawsuit under the Administrative Procedures Act (APA). A lawsuit filed under APA involving a Navy bombing range is the basis for a court ruling that unintentional take of migratory birds applies to federal actions. Ensuring the necessary data is available to adequately assess impacts of a proposed action will help avoid lawsuits or help ensure such lawsuits have no grounds. The data gathered in a bird monitoring program will provide the best scientific data available to assess the expected impacts of a proposed action on migratory bird species through the NEPA process. This report presents recommendations developed by the U.S. Geological Survey (USGS) for the Department of Defense (DoD) on establishing a "Coordinated Bird Monitoring (CBM) Plan." The CBM Plan is intended to ensure that DoD meets its conservation and regulatory responsibilities for monitoring birds (Chapter 1). The report relies heavily on recommendations in the report, "Opportunities for improving avian monitoring" (http://www.nabci-us.org/aboutnabci/monitoringreportfinal0307.pdf), by the U.S. North American Bird Conservation Initiative (U.S. NABCI Monitoring Subcommittee, 2007) and on a review of 358 current DoD bird monitoring programs carried out as part of this project (Chapter 2). This report contains 12 recommendations which, if followed, would result in a comprehensive, efficient, and useful approach to bird monitoring. The recommendations are based on the entire report but are presented together at the end of Chapter 1. DoD has agreed to consider implementing these recommendations; however, final decisions will be based upon such factors as the availability of resources and military mission considerations. These recommendations from USGS can be summarized into 6 major themes: A major report on monitoring was released in 2007 by the U.S. North American Bird Conservation Initiative (http://www.nabci-us.org/main2.html). DoD can be consistent with this report by establishing policy that monitoring will be explicitly acknowledged as an integral element of bird management and conservation (Recommendation 1). The design of monitoring and assessment programs for birds should include the following steps: Preparation of a document describing the program's goals, objectives, and methods similar to a format we provide (Recommendation 2, Chapter 4). Selection of field methods using an "expert system" developed in this project (Recommendation 3, Chapter 5) or another well-documented system. Preparation and storage of metadata describing the monitoring program in the Natural Resources Monitoring Partnership (NRMP), and other appropriate databases Recommendation 4, Chapter 6). Entry of the survey data using eBird (http://ebird.org/content/dod) or the Coordinated Bird Monitoring Database (CBMD) and long-term storage of the data in the CBMD and the Avian Knowledge Network (AKN; Recommendation 5, Chapter 6; http://www.avianknowledge.net/). Submission of major results from the monitoring program for publication in a peer reviewed journal (Recommendation 6). The DoD Legacy Resource Management Program (Legacy; https://www.dodlegacy.org), Environmental Security Technology Certification Program (ESTCP; http://www.serdp.org/), and Strategic Environmental Research and Development Program (SERDP; http://www.serdp.org/) should be encouraged to continue their significant contributions to the foundations of bird monitoring (Recommendation 7, Chapters 1 and 3). Appropriate monitoring should be conducted to identify species of concern on installations. A year-round, one-time survey of birds on installations with habitat for migratory birds would provide the most information to assist compliance with the MOU, the Final Rule, and the NEPA analyses of proposed actions. However, less intensive survey efforts can still be conducted to yield useful information. We describe how various levels of survey effort might be organized and conducted. In addition, continuing surveys, as feasible, would further assist in documenting effects of military readiness and non-readiness activities on species of concern (SOC) (Recommendation 8, Chapter 7). Participation in well-designed, large-scale surveys [(e.g., North American Breeding Bird Survey (BBS; http://www.pwrc.usgs.gov/bbs/), Monitoring Avian Productivity and Survivorship (MAPS; http://www.birdpop.org/maps.htm)] on land that DoD manages or on lands where the results will be of high interest to DoD, will provide DoD and other NABCI members with information important to bird conservation (Recommendation 9, Chapter 8). Review and implementation of the CBM Plan should involve both higher level management and installation-level natural resources managers (Recommendation 11), be implemented through cooperative partnerships (Recommendation 12), and be followed on U.S territory lands and Army Corps of Engineers projects (Recommendation 10).Additional recommendations that pertain to implementing the DoD CBM Plan are discussed in Chapter 9.

Open-File Report↗

Use of artificially created Douglas-fir snags by cavity-nesting birds

In western Oregon, we created snags by sawing tops off live Douglas-fir ( Pseudotsuga menziesii ) (n = 821) trees and monitored their condition and use by cavity-nesting birds. We created snags in three silvicultural treatments: modified clearcut stands, two-story stands, and small-patch group-selection stands. We used two snag patterns: clumped and scattered. Created snags averaged 3.8/ha in density, 17 m in height, and 75 cm in diameter. Chainsaw-topped snags were used by cavity nesters within 5 yr of creation. Abundance of excavated cavities increased in all silvicultural treatments (P = 0.0001) and was higher in two-story and clearcut stands than in small-patch stands (P ≤ 0.0004). We did not, however, find that snag pattern (clumped v. scattered) affected use by cavity-nesting birds based on abundance of excavated cavities (P > 0.6). We observed excavated cavities in five hardwood species indicating that hardwoods represented an important resource for cavity-nesting birds. Creating conifer snags by topping and retaining hardwoods may retain or increase populations of cavity nesters in areas with low natural snag density.

Oregon↗

Hydrates contain vast store of world gas resources

The discovery of large gas hydrate accumulations on the North Slope of Alaska and off the U.S. southeast coast has heightened interest in gas hydrates as a possible energy resource of the future. However, significant geological uncertainties and possibly insurmountable technical issues need to be resolved before gas hydrates can be counted as a viable option for future, affordable supplies of natural gas.

Oil & Gas Journal↗

Fungal endophytes: diversity and functional roles

All plants in natural ecosystems appear to be symbiotic with fungal endophytes. This highly diverse group of fungi can have profound impacts on plant communities through increasing fitness by conferring abiotic and biotic stress tolerance, increasing biomass and decreasing water consumption, or decreasing fitness by altering resource allocation. Despite more than 100 yr of research resulting in thousands of journal articles, the ecological significance of these fungi remains poorly characterized. Historically, two endophytic groups (clavicipitaceous (C) and nonclavicipitaceous (NC)) have been discriminated based on phylogeny and life history traits. Here, we show that NC-endophytes represent three distinct functional groups based on host colonization and transmission, in planta biodiversity and fitness benefits conferred to hosts. Using this framework, we contrast the life histories, interactions with hosts and potential roles in plant ecophysiology of C- and NC-endophytes, and highlight several key questions for future work in endophyte biology.

New Phytologist↗

Long-term monitoring of island night lizards on San Nicolas Island

We describe the results of long-term population monitoring of the island night lizard Xantusia riversiana on San Nicolas Island, California, following the species' removal from the U.S. Endangered Species list in 2014. Monitoring activities were carried out from October 2014 through November 2023, but we also incorporate data from earlier work dating back to 1993. Because of habitat loss on the western part of the island, the island night lizard is almost entirely confined to the island's eastern half. The species' distribution remains largely the same since studies in the 1990s, though small increases in distribution were noted at the island's west end. Numbers at most long-term monitoring sites appeared to show a slight decrease associated with a multi-year drought, with numbers returning to previous levels by the end of the monitoring period. Models fit to counts of newly recruited lizards suggested a positive association between winter precipitation and abundance; however, we found a simpler model including constant abundance throughout the study to be more parsimonious. Two monitoring sites showed marked decreases in numbers, with one site declining to zero following infestation of the area by non-native Argentine ants Linepithema humile . The island's vegetation and natural communities continue to gradually recover from a century of overgrazing by sheep and the widespread introduction of aggressive non-native plants. Habitat restoration efforts by U.S. Navy natural resources staff on the island may lead to increasing population numbers and genetic connectivity, but persistent threats remain for the island night lizard on San Nicolas Island.

California↗

Harvesting and replenishment policies for renewable natural resources

The current paper links the optimal intertemporal use of renewable natural resources to the harvesting activities of various economic agents. Previous contributions cite market forces as a causative factor inducing the extirpation of renewable natural resources. The analysis given here discusses investment in the stock of renewable resources and cites important examples of this activity. By introducing joint harvesting and replenishment strategies into a model of renewable resource use, the analysis adds descriptive reality and relevance to positive and normative discussions of renewable natural resource use. A high price for the yield or a high discount rate tend to diminish the size of the optimum stationary stock of the resource with a non-replenishment harvesting strategy. Optimal non-replenishment harvesting strategies for renewable natural resources will exhaustion or extirpation of the resource if the price of the yield or the discount rate are sufficiently large. However, the availability of a replenishment technology and the use of replenishment activities tends to buffer the resource against exhaustion or extirpation.

Journal of Environmental Management↗

Coal and petroleum resources in the Appalachian basin: distribution, geologic framework, and geochemical character

Fossil fuels from the Appalachian basin region have been major contributors to the Nation’s energy supplies over much of the last three centuries. Appalachian coal and petroleum resources are still available in sufficient quantities to contribute significantly to fulfilling the Nation’s energy needs. Although both conventional oil and gas continue to be produced in the Appalachian basin, most new wells in the region are drilled in shale reservoirs to produce natural gas. U.S. Geological Survey (USGS) Professional Paper 1708 is a modern, indepth collection of reports, cross sections, and maps that describe the geology of the Appalachian basin and its fossil fuel resources. This publication supplements and updates older USGS regional studies of Appalachian basin coal and petroleum resources. Some chapters are new, and several have been published in outside journals or as other USGS publications. Although this volume is not a comprehensive regional treatment of all notable geologic and fossil fuel localities in the Appalachian basin, the selected study areas and topics presented in the chapters pertain to large segments of the basin and a wide range of stratigraphic intervals. This volume discusses the locations of coal and petroleum accumulations, the stratigraphic and structural framework, and the geochemical characteristics of the coal beds and petroleum in the basin, as well as the results of recent USGS assessments of coal, oil, and gas resources in the basin. Many of the maps and accompanying data supporting the reports in this volume are available from chapter I.1 as downloadable geographic information system (GIS) data files about the characteristics of selected coal beds and oil and gas fields, locations of oil and gas wells, coal production, coal chemistry, total petroleum system (TPS) boundaries, and bedrock geology. Log ASCII Standard (LAS) files for geophysical (gamma ray) wireline well logs are included in other chapters. Professional Paper 1708 is intended primarily for geoscientists in academia, industry, and government who are interested in Appalachian basin geology and its coal and petroleum resources. Other users, however, may find the topics, papers, and digital images valuable for land-use and policy planning. Among the anticipated benefits of the report are improvements in (1) resource assessment estimates and methodology, (2) exploration strategies, (3) basin models, and (4) energy use policies.

Appalachian basin↗

Linking landscape characteristics to mineral site use by band-tailed pigeons in Western Oregon: Coarse-filter conservation with fine-filter tuning

Mineral sites are scarce resources of high ion concentration used heavily by the Pacific Coast subpopulation of band-tailed pigeons. Over 20% of all known mineral sites used by band-tailed pigeons in western Oregon, including all hot springs, have been abandoned. Prior investigations have not analyzed stand or landscape level habitat composition in relation to band-tailed pigeon use of mineral sites. We used logistic regression models to evaluate the influence of habitat types, identified from Gap Analysis Program (GAP) products at two spatial scales, on the odds of mineral site use in Oregon (n = 69 currently used and 20 historically used). Our results indicated that the odds of current use were negatively associated with non-forested terrestrial and private land area around mineral sites. Similarly, the odds of current mineral site use were positively associated with forested and special status (GAP stewardship codes 1 and 2) land area. The most important variable associated with the odds of mineral site use was the amount of non-forested land cover at either spatial scale. Our results demonstrate the utility of meso-scale geographic information designed for regional, coarse-filter approaches to conservation in fine-filter investigation of wildlife-habitat relationships. Adjacent landcover and ownership status explain the pattern of use for known mineral sites in western Oregon. In order for conservation and management activities for band-tailed pigeons to be successful, mineral sites need to be addressed as important and vulnerable resources. Management of band-tailed pigeons should incorporate the potential for forest management activities and land ownership patterns to influence the risk of mineral site abandonment.

Natural Areas Journal↗

The web of life: Natural science information on the Internet

As society has come to equate economic prosperity with the health of our living resources, national science policy has called for the development of a comprehensive digital knowledge base to support informed decision making and wise resource management. The Internet and World Wide Web demonstrate the earliest stages of this evolving virtual library of the natural world, offering an increasing array of high-quality, innovative resources and services in the natural science arena. This article discusses the leading providers of natural science information on the Internet and highlights some of the exemplary resources they are delivering online. The discussion concludes with a brief discussion of the role of the librarian in developing the Web of natural science knowledge online and provides a short Webliography of starting points for further exploration of this subject area. PDF

Journal of Library Administration↗

Suspended sediment and fisheries: An exploration of empirical relationships

Objective: Sediment has an important role in aquatic ecosystems, however, excess sediment can negatively impact fish and other aquatic life. Quantifying the response of aquatic life, particularly fish, to suspended sediment is important for natural resource managers tasked with developing sediment management guidelines to protect aquatic ecosystems. Our goal was to assess the ability of established, revised, and alternate severity of ill effect (SEV) dose-response models to predict the impact of suspended sediment on fish. Methods: We synthesized existing literature to develop an expansive dataset that relates suspended sediment concentration and exposure duration to biological effects on fishes and assessed the predictive ability of established and revised SEV dose-response models. We investigated potential sources of variation in biological responses to suspended sediment dose and explored two alternative approaches for assessing the effects of suspended sediment on fish: 90th quantile SEV dose-response regression models and logistic SEV dose-response models. Results: We found that both established and revised linear SEV dose-response models poorly quantify fish biological response to suspended sediment. Quantile SEV dose-response regressions also performed poorly. More promising are logistic dose-response models that identify sediment thresholds where major effects of sediment on fish can be expected to occur. We demonstrate that fish biological response to suspended sediment is modulated by sediment particle size, water temperature, and dissolved oxygen levels, suggesting additional environmental and biological variables to consider when evaluating the effects of suspended sediment on fish. Conclusion: We contribute revised and novel empirically derived tools for predicting the effects of suspended sediment on fish and demonstrate how environmental variables and life stage may modulate fish biological response. Our work illustrates challenges associated with predictive modeling and some potential sources of variation. While empirical models integrating biological stress response to suspended sediment may help natural resource managers capture potential impacts of this stressor, a cautious approach that considers co-acting stressors may be most effective for sediment management that is protective of fish.

North American Journal of Fisheries Management↗

Interactions between ground water and surface water in the Suwannee River basin, Florida

Ground water and surface water constitute a single dynamic system in roost parts of the Suwannee River basin due to the presence of karat features that facilitate the interaction between the surface and subsurface. Low radon-222 concentrations (below background levels) and enriched amounts of oxygen-18 and deuterium in ground water indicate mixing with surface water in parts of the basin. Comparison of surface water and regional ground water flow patterns indicate that boundaries for ground water basins typically do not coincide with surface water drainage subbasins. There are several areas in the basin where ground water flow that originates outside of the Suwannee River basin crosses surface water basin boundaries during both low-flow and high-flow conditions. In a study area adjacent to the Suwannee River that consists predominantly of agricultural land use, 18 wells tapping the Upper Floridan aquifer and 7 springs were sampled three times during 1990 through 1994 for major dissolved inorganic constituents, trace elements, and nutrients. During a period of above normal rainfall that resulted in high river stage and high ground water levels in 1991, the combination of increased amounts of dissolved organic carbon and decreased levels of dissolved oxygen in ground water created conditions favorable for the natural reduction of nitrate by denitrification reactions in the aquifer. As a result, less nitrate was discharged by ground water to the Suwannee River.

Journal of the American Water Resources Associatio↗

Facing our freshwater crisis via fluid and agile communication: A grand challenge

Earth has been labeled the blue planet because of its abundance of water that covers most of its surface, but the majority is salt water in our oceans. Oceans account for ~352 million km 2 or 69% of the planet's surface, land for 150 million km 2 or 29%, and fresh water for 9 million km 2 or 2% ( Shiklomanov, 2000 ). Most of the fresh water is locked away in glaciers and ice sheets on Greenland and Antarctica, with less than a third accessible to biota ( Shiklomanov, 2000 ). This miniscule fraction of fresh water is our most precious natural resource, the foundation for life in terrestrial environments, and humanity depends on it, but the resource faces enormous threats. My aim in this brief editorial is to define the freshwater resource, succinctly summarize the major threats it faces, and underscore recent calls for conservation. My review is cursory, but I call attention to various recent exhaustive reviews. I end with my views on how journals can help advance global freshwater conservation efforts.

Frontiers in Freshwater Science↗

Reserve growth important to U.S. gas supply

Reserve growth is a major component of the remaining U.S. natural gas resources. Historical data support this premise, as do estimates of technically recoverable and of economically recoverable gas resources remaining in the U.S. However, reserve growth is still poorly understood. Hence, much work remains to be done on the phenomenon of reserve growth.

Oil & Gas Journal↗