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Temporal and spatial relationships of Yellowfin Tuna to deepwater petroleum platforms in the northern Gulf of Mexico

In 2006–2007, 110 Yellowfin Tuna Thunnus albacares were tagged with acoustic transmitters near deepwater oil platforms and one drillship in the northern Gulf of Mexico off the Mississippi River delta to determine the extent to which platforms act as fish aggregating devices (FADs). Vemco acoustic receivers were installed on six deepwater platforms to detect the presence of tagged individuals. Five of 12 Yellowfin Tuna captured in 2006 were detected in 2007, demonstrating multi-year presence in the region. Ninety Yellowfin Tuna were detected in 2007, resulting in 221 platform residencies and 32 single detections. Duration of residence at a platform was positively correlated with the platform's depth, and the number of transitions decreased with platform-to-platform distance. In total, 109 movements between platforms by 46 (51%) different individuals were detected, traveling distances of up to 98.2 km. Yellowfin Tuna displayed interactions with deepwater platforms in the northern Gulf of Mexico similar to their interactions with FADs and other studied geological features, by way of aggregating or using them as meeting points, landmarks, and stopovers within a movement corridor. The large number of oil and gas platforms located in the northern Gulf of Mexico may have a significant effect on distribution, retention, and migration of Yellowfin Tuna populations in this area of the gulf.

Louisiana

Single-beam bathymetry data collected in 2015 from Grand Bay, Alabama-Mississippi

As part of the Sea-level and Storm Impacts on Estuarine Environments and Shorelines (SSIEES) project, scientists from the U.S. Geological Survey (USGS) St. Petersburg Coastal and Marine Science Center conducted a single-beam bathymetry survey within the estuarine, open-bay, and tidal creek environments of Grand Bay, Alabama-Mississippi, from May to June 2015. The goal of the SSIEES project is to assess the physical controls of sediment and material exchange between wetlands and estuarine environments along the northern Gulf of Mexico, specifically Grand Bay, Alabama-Mississippi; Vermilion Bay, Louisiana; and, along the east coast, within Chincoteague Bay, Virginia-Maryland. The data described in this report provide baseline bathymetric information for future research investigating wetland-marsh evolution, sediment transport, erosion, recent and long-term geomorphic change, and can also support the modeling of changes in response to restoration and storm impacts. The survey area encompasses more than 40 square kilometers of Grand Bay’s waters.

Alabama, Mississippi

Bathymetry and acoustic backscatter data collected in 2010 from Cat Island, Mississippi

Scientists from the U.S. Geological Survey (USGS), St. Petersburg Coastal and Marine Science Center (SPCMSC), in collaboration with the U.S. Army Corps of Engineers (USACE), conducted geophysical and sedimentological surveys around Cat Island, the westernmost island in the Mississippi-Alabama barrier island chain (fig. 1). The objectives of the study were to understand the geologic evolution of Cat Island relative to other barrier islands in the northern Gulf of Mexico and to identify relationships between the geologic history, present day morphology, and sediment distribution. This report contains data from the bathymetry and side-scan sonar portion of the study collected during two geophysical cruises. Interferometric swath bathymetry and side-scan sonar data were collected aboard the RV G.K. Gilbert September 7-15, 2010. Single-beam bathymetry was collected in shallow water around the island (< 2 meter (m)) from the RV Streeterville from September 28 to October 2, 2010, to cover the data gap between the landward limit of the previous cruise and the shoreline. This report serves as an archive of processed interferometric swath and single-beam bathymetry and side scan sonar data. GIS data products include a 50-m cell size interpolated gridded bathymetry surface, trackline maps, and an acoustic side-scan sonar image. Additional files include error analysis maps, Field Activity Collection System (FACS) logs, and formal Federal Geographic Data Committee (FDGC) metadata.

Alabama;Mississippi

Sediment data collected in 2010 from Cat Island, Mississippi

Scientists from the U.S. Geological Survey, St. Petersburg Coastal and Marine Science Center, in collaboration with the U.S. Army Corps of Engineers, conducted geophysical and sedimentological surveys in 2010 around Cat Island, Mississippi, which is the westernmost island in the Mississippi-Alabama barrier island chain. The objective of the study was to understand the geologic evolution of Cat Island relative to other barrier islands in the northern Gulf of Mexico by identifying relationships between the geologic history, present day morphology, and sediment distribution. This data series serves as an archive of terrestrial and marine sediment vibracores collected August 4-6 and October 20-22, 2010, respectively. Geographic information system data products include marine and terrestrial core locations and 2007 shoreline data. Additional files include marine and terrestrial core description logs, core photos, results of sediment grain-size analyses, optically stimulated luminescence dating and carbon-14 dating locations and results, Field Activity Collection System logs, and formal Federal Geographic Data Committee metadata.

Mississippi

Demersal fishes associated with Lophelia pertusa coral and hard-substrate biotopes on the continental slope, northern Gulf of Mexico

The demersal fish fauna of Lophelia pertusa (Linnaeus, 1758) coral reefs and associated hard-bottom biotopes was investigated at two depth horizons in the northern Gulf of Mexico using a manned submersible and remote sampling. The Viosca Knoll fauna consisted of at least 53 demersal fish species, 37 of which were documented by submersible video. On the 325 m horizon, dominant taxa determined from frame-by-frame video analysis included Stromateidae, Serranidae, Trachichthyidae, Congridae, Scorpaenidae, and Gadiformes. On the 500 m horizon, large mobile visual macrocarnivores of families Stromateidae and Serranidae dropped out, while a zeiform microcarnivore assumed importance on reef "Thicket" biotope, and the open-slope taxa Macrouridae and Squalidae gained in importance. The most consistent faunal groups at both depths included sit-and-wait and hover-and-wait strategists (Scorpaenidae, Congridae, Trachichthyidae), along with generalized mesocarnivores (Gadiformes). The specialized microcarnivore, Grammicolepis brachiusculus Poey, 1873, appears to be highly associated with Lophelia reefs. The coral "Thicket" biotope was extensively developed on the 500 m site, but fish abundance was low with only 95 fish per hectare. In contrast to Lophelia reefs from the eastern the North Atlantic, the coral "Rubble" biotope was essentially absent. This study represents the first quantitative analysis of fishes associated with Lophelia reefs in the Gulf of Mexico, and generally in the western North Atlantic.

Gulf of Mexico

Sources of glacial moisture in Mesoamerica

Paleoclimatic records from Mesoamerica document the interplay between Atlantic and Pacific sources of precipitation during the last glacial stage and Holocene. Today, and throughout much of the Holocene, the entire region receives its principal moisture in the summer from an interaction of easterly trade winds with the equatorial calms. Glacial records from sites east of 95?? W in Guatemala, Florida, northern Venezuela and Colombia record dry conditions before 12 ka, however. West of 95?? W, glacial conditions were moister than in the Holocene. For example, pollen and diatom data show that Lake Pa??tzcuaro in the central Mexican highlands was cool, deep and fresh during this time and fossil pinyon needles in packrat middens in Chihuahua, Sonora, Arizona, and Texas indicate cooler glacial climates with increased winter precipitation. Cold Gulf of Mexico sea-surface temperatures and reduced strength of the equatorial calms can explain arid full and late glacial environments east of 95?? W whereas an intensified pattern of winter, westerly air flow dominated hydrologic balances as far south as 20?? N. Overall cooler temperatures may have increased effective moisture levels during dry summer months in both areas. ?? 1997 INQUA/ Elsevier Science Ltd.

Quaternary International

Importance of the Mississippi River Basin for investigating agricultural–chemical contamination of the hydrologic cycle

This special issue is devoted to recent and ongoing research relating to the fate and transport of agricultural chemicals in the Mississippi River Basin by the US Geological Survey Toxic Substances Hydrology (Toxics) Program. The Mississippi River Basin drains approximately 3 200 000 km 2 representing 41% of the United States. This is the largest river in the United States and the third largest in the world. The Mississippi River discharges an average of 19 920 m 3 /s of water into the Gulf of Mexico. The river is an extensively used resource, supplying drinking water to 70 cities in the United States. The Mississippi River Basin has undergone dramatic land use and cultural changes over the last 150 years. Approximately 70 million people now live within the basin, representing approximately 27% of the nation's population. This basin has also become one of the most productive agricultural regions in the world in terms of both crops and livestock grown. Approximately 65% of the nation's harvested cropland is grown in this basin, with more than 100 000 metric tons (t) of pesticides and approximately 6 500 000 t of commercial nitrogen fertilizers applied to cropland within the basin annually. The drainage of more than 20 000 000 ha within the basin has been enhanced by means of tile lines and ditches to lower the water table to make the cropland more productive. While removing the water from the soil as intended, this practice also leads to more rapid transport of contaminants to the river, and ultimately the Gulf of Mexico. Furthermore, the extensive chemical use in the Mississippi River Basin has led to the transport of pesticides and nitrate into the region&rsquo;s streams, aquifers, and atmosphere. An estimated 1 000 000 t of nitrate-N is transported from the Mississippi River Basin into the Gulf of Mexico annually. The peak annual load of herbicides to the Gulf of Mexico has been documented at 1920 t. The fundamental goal of the papers presented in this volume is to provide a scientific basis for decisions necessary to promote sound and efficient agricultural practices and protect the quality of the nation's water resources.

Science of the Total Environment

Science target prioritization framework for remote sensing

Behind the scenes of a remote sensing mission there are complex decision making and planning operations. Streamlining these operations, with a quantitative scientific value framework, aids efficient and optimized science data collection. While there have been previous efforts to quantify the science value for specific science scenarios, our work aims to develop a general framework which can be applied across different scenarios. We describe a pipeline of processes which combines model forecast and observation data, in computational forms, as dictated by the mission objectives set forth by subject matter experts. The framework is described with use cases involving the monitoring of nitrogen dioxide (NO2) concentrations over the Gulf of Mexico and methane concentrations over interior Alaska.

Conference Paper

Archive of digital boomer subbottom data collected during USGS cruises 99FGS01 and 99FGS02 offshore southeast and southwest Florida, July and November, 1999

In July (19 - 26) and November (17 - 18) of 1999, the USGS, in cooperation with the Florida Geological Survey (FGS), conducted two geophysical surveys in: (1) the Atlantic Ocean offshore of Florida's east coast from Orchid to Jupiter, FL, and (2) the Gulf of Mexico offshore of Venice, FL. This report serves as an archive of unprocessed digital boomer subbottom data, trackline maps, navigation files, GIS files, Field Activity Collection System (FACS) logs, and formal Federal Geographic Data Committee (FGDC) metadata. Filtered and gained (showing a relative increase in signal amplitude) digital images of the subbottom profiles are also provided. The USGS St. Petersburg Coastal and Marine Science Center (SPCMSC) assigns a unique identifier to each cruise or field activity. For example, identifiers 99FGS01 and 99FGS02 refer to field data collected in 1999 for cooperative work with the FGS. The numbers 01 and 02 indicate the data were collected during the first and second field activities for that project in that calendar year. Refer to http://walrus.wr.usgs.gov/infobank/programs/html/definition/activity.html for a detailed description of the method used to assign the field activity identification (ID).

Florida

USGS field activity 09FSH01 on the west Florida shelf, Gulf of Mexico, in February 2009

From February 24 to 28, 2009, a cruise led by the U.S. Geological Survey (USGS) collected air and sea surface partial pressure of carbon dioxide (pCO2), pH, dissolved inorganic carbon (DIC), and total alkalinity (TA) data on the west Florida shelf. Approximately 1,800 data points were collected underway over a 1,300-kilometer (km) trackline using the Multiparameter Inorganic Carbon Analyzer (MICA). The collection of data extended from Crystal River to Marco Island, Florida (~400 km), and westward up to 160 km off the Florida coast. Discrete water samples were also taken at specific localities to corroborate underway data measurements. The USGS St. Petersburg Coastal and Marine Science Center (SPCMSC) assigns a unique identifier to each cruise or field activity. For example, 09FSH01 tells us that the data were collected in 2009 for the Response of Florida Shelf (FSH) Ecosystems to Climate Change project, and the data were collected during the first field activity for that study in that calendar year.

Florida

Arizona Water Science Center activities at Lees Ferry, Arizona

Introduction In 1921, the U.S. Geological Survey (USGS) established a streamgage on the Colorado River at Lees Ferry, Arizona, to monitor the river’s flow and level as it enters Grand Canyon. The following year, the seven States encompassing the Colorado River Basin (Arizona, California, Colorado, Nevada, New Mexico, Utah, and Wyoming) negotiated the 1922 Colorado River Compact to regulate distribution of the river’s waters between them. The compact divided the basin into two regions—the Upper Basin and the Lower Basin—and established the dividing point between them about one mile downstream from Lees Ferry, just below the confluence of the Colorado and Paria Rivers. The Colorado River at Lees Ferry streamgage (USGS station 09380000) is one of the most important streamgages in the United States because it is used to measure how much water passes from the Upper Basin to the Lower Basin through Glen Canyon Dam. The dam, constructed between 1956 and 1966, generates hydropower and stores water in Lake Powell reservoir, which is used to provide Upper and Lower Basin states with the water allotted to them by the compact. Lower Basin states depend on releases from the dam to receive their allotments. The Lees Ferry streamgage, located less than 16 miles downstream from Glen Canyon Dam, produces publicly available, real-time water data that allows the Colorado River’s streamflow below the dam to be monitored. Most years, the Colorado River runs dry before reaching its historical terminus at the Gulf of California in Mexico, so measuring and monitoring the river at Lees Ferry is critical for the Lower Basin ecosystems, agricultural resources, and municipal industries that rely on the river’s every drop. Additionally, Grand Canyon river guides and recreationalists depend on water level data from the Lees Ferry streamgage to determine when to run rapids and camp on sandbars. Streamflow and water-quality data collected at Lees Ferry are also important for monitoring the health of the Colorado River’s aquatic life because some species, including fish and macroinvertebrates, require certain water conditions to survive, reproduce, and spawn. The Arizona Water Science Center is responsible for maintaining and collecting water data from the Lees Ferry streamgage. The Arizona Water Science Center is a branch of the USGS dedicated to providing high quality, impartial water data to resource managers and the public for their use in understanding and managing critical water resources in Arizona and the Southwest.

Arizona

USGS field activity 09FSH02 on the west Florida shelf, Gulf of Mexico, in August 2009

From August 17 to 21, 2009, a cruise led by the U.S. Geological Survey (USGS) collected air and sea surface partial pressure of carbon dioxide (pCO2), pH, dissolved inorganic carbon (DIC), and total alkalinity (TA) data on the west Florida shelf. Approximately 2,000 data points were collected underway over a 1,320-kilometer (km) track line using the Multiparameter Inorganic Carbon Analyzer (MICA). The collection of data extended from Crystal River to Marco Island, Florida (~400 km), and westward up to 160 km off the Florida coast. Discrete water samples were also taken at specific localities to corroborate underway data measurements. The USGS St. Petersburg Coastal and Marine Science Center (SPCMSC) assigns a unique identifier to each cruise or field activity. For example, 09FSH02 tells us that the data were collected in 2009 for the Response of Florida Shelf (FSH) Ecosystems to Climate Change project, and the data were collected during the second field activity for that study in that calendar year.

Florida

USGS field activity 08FSH01 on the west Florida shelf, Gulf of Mexico, in August 2008

From August 11 to 15, 2008, a cruise led by the U.S. Geological Survey (USGS) collected air and sea surface partial pressure of carbon dioxide (pCO2), pH, dissolved inorganic carbon (DIC), and total alkalinity (TA) data on the west Florida shelf. Approximately 1,600 data points were collected underway over a 650-kilometer (km) trackline using the Multiparameter Inorganic Carbon Analyzer (MICA). The collection of data extended from Crystal River southward to Marco Island, Florida (~400 km), and westward up to 160 km off the Florida coast. Discrete water samples from approximately 40 locations were also taken at specific localities to corroborate underway data measurements. The USGS St. Petersburg Coastal and Marine Science Center (SPCMSC) assigns a unique identifier to each cruise or field activity. For example, 08FSH01 tells us the data were collected in 2008 for the Response of Florida Shelf (FSH) Ecosystems to Climate Change project, and the data were collected during the first field activity for that study in that calendar year.

Florida

Was everything bigger in Texas? Characterization and trends of a land-based recreational shark fishery

Although current assessments of shark population trends involve both fishery-independent and fishery-dependent data, the latter are generally limited to commercial landings that may neglect nearshore coastal habitats. Texas has supported the longest organized land-based recreational shark fishery in the United States, yet no studies have used this “non-traditional” data source to characterize the catch composition or trends in this multidecadal fishery. We analyzed catch records from two distinct periods straddling heavy commercial exploitation of sharks in the Gulf of Mexico (historical period = 1973–1986; modern period = 2008–2015) to highlight and make available the current status and historical trends in Texas’ land-based shark fishery. Catch records describing large coastal species (>1,800 mm stretched total length [STL]) were examined using multivariate techniques to assess catch seasonality and potential temporal shifts in species composition. These fishery-dependent data revealed consistent seasonality that was independent of the data set examined, although distinct shark assemblages were evident between the two periods. Similarity percentage analysis suggested decreased contributions of Lemon Shark Negaprion brevirostris over time and a general shift toward the dominance of Bull Shark Carcharhinus leucas and Blacktip Shark C. limbatus . Comparisons of mean STL for species captured in historical and modern periods further identified significant decreases for both Bull Sharks and Lemon Sharks. Size structure analysis showed a distinct paucity of landed individuals over 2,000 mm STL in recent years. Although inherent biases in reporting and potential gear-related inconsistencies undoubtedly influenced this fishery-dependent data set, the patterns in our findings documented potential declines in the size and occurrence of select large coastal shark species off Texas, consistent with declines reported in the Gulf of Mexico. Future management efforts should consider the use of non-traditional fishery-dependent data sources, such as land-based records, as data streams in stock assessments.

Texas

United States Gulf of Mexico waters provide important nursery habitat for Mexico’s green turtle nesting populations

Resolving natal populations for juvenile green turtles is challenging given their potential for extensive dispersal during the oceanic stage and ontogenetic shifts among nursery habitats. Mitochondrial DNA markers have elucidated patterns of connectivity between green turtle nesting populations (rookeries) and juvenile foraging aggregations. However, missing rookery baseline data and haplotype sharing among populations have often impeded inferences, including estimating origins of Gulf of Mexico juveniles. Here, we assessed genetic structure among seven foraging aggregations spanning southern Texas (TX) to southwestern Florida (SWFL), including Port Fourchon, Louisiana (LA); a surface-pelagic aggregation (SP) offshore of Louisiana and Florida; Santa Rosa Island, Florida (SRI); St. Joseph Bay, Florida (SJB); and the Big Bend region, Florida (BB). We estimated source contributions to aggregations with novel genetic data (excluding SP and BB) using a Bayesian many-to-one mixed stock analysis (MSA) approach. Haplotype frequencies for western (TX, LA, SP, SRI) and eastern (SJB, BB, SWFL) aggregations were significantly differentiated. The largest shift in haplotype frequencies between proximal nursery sites occurred between SRI and SJB, separated by only 150 km, highlighting the lack of a geographic yardstick for predicting genetic structure. In contrast to previous MSA results, there was no signal of Florida juveniles at any foraging site. Mexican contributions dominated in all aggregations, with strong connectivity between western Bay of Campeche (Tamaulipas/Veracruz) rookeries and western foraging aggregations. MSA indicated more diverse Mexican origins for eastern aggregations, with larger inputs from the eastern Bay of Campeche (Campeche/Yucatán), Campeche Bank, and Quintana Roo rookeries. These results demonstrate the significance of the Gulf of Mexico coast and offshore waters of the United States as important nursery habitat for green turtles of Mexican origin and highlight the need for international coordination for management of these populations.

Alabama, Florida, Louisiana, Mississippi, Texas

Sea level as affected by river runoff, eastern United States

Variations in annual river inflow account for 7 to 21 percent of the total variation in average annual sea level along the Atlantic and Gulf of Mexico coasts of the United States. This compares with 29 to 68 percent of the total variation that can be attributed to the secular rise of sea level, and with 10 to 50 percent of the variation that cannot be attributed to either the river inflow or the secular rise.

eastern United States

Water-quality, bed-sediment, and discharge data for the Mississippi River-Gulf Outlet and adjacent waterways, southeastern Louisiana, August 2008 through December 2009

The Mississippi River-Gulf Outlet navigation channel (MRGO) was constructed in the early 1960s to provide a safer and shorter route between the Gulf of Mexico and the Port of New Orleans for deep-draft, ocean-going vessels and to promote the economic development of the Port of New Orleans. In 2006, the U.S. Army Corps of Engineers developed a plan to de-authorize the MRGO. The plan called for a rock barrier to be constructed across the MRGO near Bayou La Loutre. In 2008, the U.S. Geological Survey, in cooperation with the Louisiana Coastal Area Science and Technology Program began a study to document the impacts of the rock barrier on water-quality and flow before, during, and after its construction. Water-quality, bed-sediment, and discharge data were collected in the MRGO and adjacent water bodies from August 2008 through December 2009.

Louisiana

Topobathymetric elevation model development using a new methodology: Coastal National Elevation Database

During the coming decades, coastlines will respond to widely predicted sea-level rise, storm surge, and coastalinundation flooding from disastrous events. Because physical processes in coastal environments are controlled by the geomorphology of over-the-land topography and underwater bathymetry, many applications of geospatial data in coastal environments require detailed knowledge of the near-shore topography and bathymetry. In this paper, an updated methodology used by the U.S. Geological Survey Coastal National Elevation Database (CoNED) Applications Project is presented for developing coastal topobathymetric elevation models (TBDEMs) from multiple topographic data sources with adjacent intertidal topobathymetric and offshore bathymetric sources to generate seamlessly integrated TBDEMs. This repeatable, updatable, and logically consistent methodology assimilates topographic data (land elevation) and bathymetry (water depth) into a seamless coastal elevation model. Within the overarching framework, vertical datum transformations are standardized in a workflow that interweaves spatially consistent interpolation (gridding) techniques with a land/water boundary mask delineation approach. Output gridded raster TBDEMs are stacked into a file storage system of mosaic datasets within an Esri ArcGIS geodatabase for efficient updating while maintaining current and updated spatially referenced metadata. Topobathymetric data provide a required seamless elevation product for several science application studies, such as shoreline delineation, coastal inundation mapping, sediment-transport, sea-level rise, storm surge models, and tsunami impact assessment. These detailed coastal elevation data are critical to depict regions prone to climate change impacts and are essential to planners and managers responsible for mitigating the associated risks and costs to both human communities and ecosystems. The CoNED methodology approach has been used to construct integrated TBDEM models in Mobile Bay, the northern Gulf of Mexico, San Francisco Bay, the Hurricane Sandy region, and southern California.

Journal of Coastal Research