SEARCH · Search USGS

Results for “Freshwater Reviews”

Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

SourceResearch connectionFrom yearThrough year

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 91 records · Page 5Linked to original sources

USGS2016

Physiological basis of climate change impacts on North American inland fishes

Global climate change is altering freshwater ecosystems and affecting fish populations and communities. Underpinning changes in fish distribution and assemblage-level responses to climate change are individual-level physiological constraints. In this review, we synthesize the mechanistic effects of climate change on neuroendocrine, cardiorespiratory, immune, osmoregulatory, and reproductive systems of freshwater and diadromous fishes. Observed climate change effects on physiological systems are varied and numerous, including exceedance of critical thermal tolerances, decreased cardiorespiratory performance, compromised immune function, and altered patterns of individual reproductive investment. However, effects vary widely among and within species because of species, population, and even sex-specific differences in sensitivity and resilience and because of habitat-specific variation in the magnitude of climate-related environmental change. Research on the interactive effects of climate change with other environmental stressors across a broader range of fish diversity is needed to further our understanding of climate change effects on fish physiology.

Fisheries↗

USGS2016

Key ecological responses to nitrogen are altered by climate change

Climate change and anthropogenic nitrogen deposition are both important ecological threats. Evaluating their cumulative effects provides a more holistic view of ecosystem vulnerability to human activities, which would better inform policy decisions aimed to protect the sustainability of ecosystems. Our knowledge of the cumulative effects of these stressors is growing, but we lack an integrated understanding. In this Review, we describe how climate change alters key processes in terrestrial and freshwater ecosystems related to nitrogen cycling and availability, and the response of ecosystems to nitrogen addition in terms of carbon cycling, acidification and biodiversity.

Nature Climate Change↗

USGS2018

Lower lethal temperatures for nonnative freshwater fishes in Everglades National Park, Florida

Temperature is an important factor that shapes biogeography and species composition. In southern Florida, the tolerance of nonnative freshwater fishes to low temperatures is a critical factor in delineating their geographic spread. In this study, we provide empirical information on experimentally derived low-temperature tolerance limits of Banded Cichlid Heros severus and Spotfin Spiny Eel Macrognathus siamensis, two nonnative Everglades fishes that were lacking data, and African Jewelfish Hemichromis letourneuxi and Mayan Cichlid Cichlasoma urophthalmus, species for which previous results were derived from studies with small sample sizes. We also provide a literature review summarizing the current state of knowledge of low-temperature tolerances for all 17 nonnative freshwater fishes that have been found in Everglades National Park. Mean lower lethal temperature tolerances ranged from 4°C (Orinoco Sailfin Catfish Pterygoplichthys multiradiatus) to 16.1°C (Butterfly Peacock Bass Cichla ocellaris). These low-temperature limits may inform the understanding of the ecological role or influence of nonnative fishes and may lead to potential management opportunities and applications.

Florida↗

USGS2015

Impacts of climatic variation on trout: A global synthesis and path forward

Despite increasing concern that climate change may negatively impact trout—a globally distributed group of fish with major economic, ecological, and cultural value—a synthetic assessment of empirical data quantifying relationships between climatic variation and trout ecology does not exist. We conducted a systematic review to describe how temporal variation in temperature and streamflow influences trout ecology in freshwater ecosystems. Few studies ( n = 42) have quantified relationships between temperature or streamflow and trout demography, growth, or phenology, and nearly all estimates (96 %) were for Salvelinus fontinalis and Salmo trutta . Only seven studies used temporal data to quantify climate-driven changes in trout ecology. Results from these studies were beset with limitations that prohibited quantitatively rigorous meta-analysis, a concerning inadequacy given major investment in trout conservation and management worldwide. Nevertheless, consistent patterns emerged from our synthesis, particularly a positive effect of summer streamflow on trout demography and growth; 64 % of estimates were positive and significant across studies, age classes, species, and locations, highlighting that climate-induced changes in hydrology may have numerous consequences for trout. To a lesser degree, summer and fall temperatures were negatively related to population demography (51 and 53 % of estimates, respectively), but temperature was rarely related to growth. To address limitations and uncertainties, we recommend: (1) systematically improving data collection, description, and sharing; (2) appropriately integrating climate impacts with other intrinsic and extrinsic drivers over the entire lifecycle; (3) describing indirect consequences of climate change; and (4) acknowledging and describing intrinsic resiliency.

Reviews in Fish Biology and Fisheries↗

USGS2015

The water-energy nexus: An earth science perspective

Water availability and use are closely connected with energy development and use. Water cannot be delivered to homes, businesses, and industries without energy, and most forms of energy development require large amounts of water. The United States faces two significant and sometimes competing challenges: to provide sustainable supplies of freshwater for humans and ecosystems and to ensure adequate sources of energy for future generations. This report reviews the complex ways in which water and energy are interconnected and describes the earth science data collection and research that can help the Nation address these important challenges. The earth sciences have been a cornerstone in developing our current understanding of the water-energy nexus. A full understanding of the nexus, however, is limited by uncertainty in our knowledge of fundamental issues, such as the quantity of freshwater that is available, the amount of water that is used in energy development, the effects that emerging energy development technologies have on water quality and quantity, and the amount of energy required to treat and deliver freshwater. Enhanced data collection and research can improve our understanding of these important issues and thereby lay the groundwork for informed resource management. Relevant earth science issues analyzed and discussed herein include freshwater availability; water use; ecosystems health; assessment of saline water resources; assessment of fossil-fuel, uranium, and geothermal resources; subsurface injection of wastewater and carbon dioxide and related induced seismicity; climate change and its effect on water availability and energy production; byproducts and waste streams of energy development; emerging energy-development technologies; and energy for water treatment and delivery.

Circular↗

USGS2015

Reviews and syntheses: Effects of permafrost thaw on Arctic aquatic ecosystems

The Arctic is a water-rich region, with freshwater systems covering about 16 % of the northern permafrost landscape. Permafrost thaw creates new freshwater ecosystems, while at the same time modifying the existing lakes, streams, and rivers that are impacted by thaw. Here, we describe the current state of knowledge regarding how permafrost thaw affects lentic (still) and lotic (moving) systems, exploring the effects of both thermokarst (thawing and collapse of ice-rich permafrost) and deepening of the active layer (the surface soil layer that thaws and refreezes each year). Within thermokarst, we further differentiate between the effects of thermokarst in lowland areas vs. that on hillslopes. For almost all of the processes that we explore, the effects of thaw vary regionally, and between lake and stream systems. Much of this regional variation is caused by differences in ground ice content, topography, soil type, and permafrost coverage. Together, these modifying factors determine (i) the degree to which permafrost thaw manifests as thermokarst, (ii) whether thermokarst leads to slumping or the formation of thermokarst lakes, and (iii) the manner in which constituent delivery to freshwater systems is altered by thaw. Differences in thaw-enabled constituent delivery can be considerable, with these modifying factors determining, for example, the balance between delivery of particulate vs. dissolved constituents, and inorganic vs. organic materials. Changes in the composition of thaw-impacted waters, coupled with changes in lake morphology, can strongly affect the physical and optical properties of thermokarst lakes. The ecology of thaw-impacted lakes and streams is also likely to change; these systems have unique microbiological communities, and show differences in respiration, primary production, and food web structure that are largely driven by differences in sediment, dissolved organic matter, and nutrient delivery. The degree to which thaw enables the delivery of dissolved vs. particulate organic matter, coupled with the composition of that organic matter and the morphology and stratification characteristics of recipient systems will play an important role in determining the balance between the release of organic matter as greenhouse gases (CO 2 and CH 4 ), its burial in sediments, and its loss downstream. The magnitude of thaw impacts on northern aquatic ecosystems is increasing, as is the prevalence of thaw-impacted lakes and streams. There is therefore an urgent need to quantify how permafrost thaw is affecting aquatic ecosystems across diverse Arctic landscapes, and the implications of this change for further climate warming.

Biogeosciences↗

USGS2013

Quagga and zebra mussels: biology, impacts, and control

Quagga and Zebra Mussels: Biology, Impacts, and Control , Second Edition provides a broad view of the zebra/quagga mussel issue, offering a historic perspective and up-to-date information on mussel research. Comprising 48 chapters, this second edition includes reviews of mussel morphology, physiology, and behavior. It details mussel distribution and spread in Europe and across North America, and examines policy and regulatory responses, management strategies, and mitigation efforts. In addition, this book provides extensive coverage of the impact of invasive mussel species on freshwater ecosystems, including effects on water clarity, phytoplankton, water quality, food web changes, and consequences to other aquatic fauna. It also reviews and offers new insights on how zebra and quagga mussels respond and adapt to varying environmental conditions. This new edition includes seven video clips that complement chapter text and, through visual documentation, provide a greater understanding of mussel behavior and distribution.

Book↗

USGS2006

Evaluation of freshwater mussel relocation as a conservation and management strategy

The relocation of unionacean mussels is commonly used as a conservation and management tool in large rivers and streams. Relocation has been used to recolonize areas where mussel populations have been eliminated by prior pollution events, to remove mussels from construction zones and to re-establish populations of endangered species. More recently, relocation has been used to protect native freshwater mussels from colonization by the exotic zebra mussel Dreissena polymorpha. We conducted a literature review of mussel relocations and evaluated their relative success as a conservation and management strategy. We found that 43% of all relocations were conducted because of construction projects that were forced to comply with the Endangered Species Act 1973 and that only 16% were monitored for five or more consecutive years. Most (43%) relocation projects were conducted from July to September, presumably a period when reproductive stress is relatively low for most species and the metabolic rate is sufficient for reburrowing in the substrate. The mortality of relocated mussels was unreported in 27% of projects; reported mortality varied widely among projects and species and was difficult to assess. The mean mortality of relocated mussels was 49% based on an average recovery rate of 43%. There is little guidance on the methods for relocation or for monitoring the subsequent long-term status of relocated mussels. Based on this evaluation, research is needed to develop criteria for selecting a suitable relocation site and to establish appropriate methods and guidelines for conducting relocation projects.

Regulated Rivers: Research & Management↗

USGS2018

Model structure of the stream salmonid simulator (S3)—A dynamic model for simulating growth, movement, and survival of juvenile salmonids

Fisheries and water managers often use population models to aid in understanding the effect of alternative water management or restoration actions on anadromous fish populations. We developed the Stream Salmonid Simulator (S3) to help resource managers evaluate the effect of management alternatives on juvenile salmonid populations. S3 is a deterministic stage-structured population model that tracks daily growth, movement, and survival of juvenile salmon. A key theme of the model is that river flow affects habitat availability and capacity, which in turn drives density dependent population dynamics. To explicitly link population dynamics to habitat quality and quantity, the river environment is constructed as a one-dimensional series of linked habitat units, each of which has an associated daily time series of discharge, water temperature, and usable habitat area or carrying capacity. The physical characteristics of each habitat unit and the number of fish occupying each unit, in turn, drive survival and growth within each habitat unit and movement of fish among habitat units. The purpose of this report is to outline the underlying general structure of the S3 model that is common among different applications of the model. We have developed applications of the S3 model for juvenile fall Chinook salmon ( Oncorhynchus tshawytscha ) in the lower Klamath River. Thus, this report is a companion to current application of the S3 model to the Trinity River (in review). The general S3 model structure provides a biological and physical framework for the salmonid freshwater life cycle. This framework captures important demographics of juvenile salmonids aimed at translating management alternatives into simulated population responses. Although the S3 model is built on this common framework, the model has been constructed to allow much flexibility in application of the model to specific river systems. The ability for practitioners to include system-specific information for the physical stream structure, survival, growth, and movement processes ensures that simulations provide results that are relevant to the questions asked about the population under study.

Open-File Report↗

USGS2025

Review of the Lake Washington Ship Canal and Ballard Locks model, Seattle, Washington, 2014–20

Executive Summary The Hiram M. Chittenden (Ballard) Locks and Lake Washington Ship Canal connect freshwater Lake Washington and saline Shilshole Bay of Puget Sound in Seattle, Washington. The locks and canal allow for ships to traverse this reach. Anadromous salmonids also migrate through, transitioning between saline and freshwater environments, and making use of a fish ladder at the locks when traveling upstream. WEST Consultants, Inc., constructed a two-dimensional hydrodynamic and water-quality model (CE-QUAL-W2) simulating flow, water temperature, and salinity for the Ballard Locks and the Lake Washington Ship Canal. An initial model was built for calendar years 2014–15, and the model was updated using a more recent and modern dataset for calendar years 2016–20. The U.S. Army Corps of Engineers requested that the U.S. Geological Survey review this model and its documentation to evaluate the technical aspects of its development and calibration. Findings from this review include the following: Overall, the Lake Washington Ship Canal CE-QUAL-W2 model was well-documented and constructed largely following typical model-development methods. The Lake Washington Ship Canal model was built with CE-QUAL-W2 model version 4.5, compiled and released by Portland State University in April 2021. CE-QUAL-W2 updates and improvements are regularly released with bug fixes and new features, so any model updates would benefit from the use of the most-recent software release. The model grid that represents the Lake Washington Ship Canal bathymetry was 9.2 kilometers (5.7 miles) long, matching the expected length of the waterway. The deepest model segments were near sampling site LLLW (Large Locks site) near the locks. Lake Union is reported to constitute most of the volume of the Lake Washington Ship Canal and is depicted as such in the model grid. The model includes several water outflows at Ballard Locks, including the large and small locks, a saltwater drain, a spillway, smolt flumes, and a fish ladder. Flows from the spillway, smolt flumes, and fish ladder were combined into one structure outflow in the model and assigned one withdrawal elevation from the Lake Washington Ship Canal. The smolt flume and spillway withdraw from the same elevation, but the fish ladder flow withdraws from a higher elevation in Lake Washington Ship Canal, and that flow could be separated into its own withdrawal. The model input files were created using the Coordinated Universal Time standard instead of the more typical choice of using local standard time. This is not incorrect, but sub-daily results would need to be converted to local time for science-communication purposes. The meteorological dataset had some unexpected anomalies, such as a baseline shift in the wind-speed dataset. Other nearby meteorological datasets could be used instead or used to correct the current meteorological inputs. The upstream boundary was configured with water-temperature data from a continuous monitor buoy in Lake Washington. The boundary salinity was set at 0 parts per thousand for the duration of the model simulation. A more realistic estimate of salinity at the upstream boundary could be constructed using data from the same buoy. Saline inflow at the downstream boundary of the Lake Washington Ship Canal model through lock exchanges at the large lock was included as a tributary in the model. Salinity and temperature inputs in this tributary at the large locks were set as constant values for the entire simulation. Saline inflow through the small lock was not included in the model because few data were available, and the input was likely to be small because of the smaller surface area and volume of the small lock relative to the large lock. The model did not include any flow, water temperature, or salinity inputs to the Lake Washington Ship Canal other than at the locks and at the upstream boundary. Any point sources, small tributaries, or stormwater inputs were omitted from the model. It is unclear whether this is a substantial omission relative to model results. Most model parameters were set as defaults or to reasonable values. However, the value of the WINDH parameter, the height of the wind speed measurement, was different than the height of the meteorological site. Compared to measured data, the model simulated water-surface elevations and water temperatures with reasonable accuracy. Differences in the modeled and measured salinities revealed some opportunities to improve the simulation of salinity, both baseline salinity and the salinity maxima in summer and autumn.

Washington↗

USGS2013

Conservation status of freshwater gastropods of Canada and the United States

This is the first American Fisheries Society conservation assessment of freshwater gastropods (snails) from Canada and the United States by the Gastropod Subcommittee (Endangered Species Committee). This review covers 703 species representing 16 families and 93 genera, of which 67 species are considered extinct, or possibly extinct, 278 are endangered, 102 are threatened, 73 are vulnerable, 157 are currently stable, and 26 species have uncertain taxonomic status. Of the entire fauna, 74% of gastropods are imperiled (vulnerable, threatened, endangered) or extinct, which exceeds imperilment levels in fishes (39%) and crayfishes (48%) but is similar to that of mussels (72%). Comparison of modern to background extinction rates reveals that gastropods have the highest modern extinction rate yet observed, 9,539 times greater than background rates. Gastropods are highly susceptible to habitat loss and degradation, particularly narrow endemics restricted to a single spring or short stream reaches. Compilation of this review was hampered by a paucity of current distributional information and taxonomic uncertainties. Although research on several fronts including basic biology, physiology, conservation strategies, life history, and ecology are needed, systematics and curation of museum collections and databases coupled with comprehensive status surveys (geographic limits, threat identification) are priorities.

Fisheries↗

USGS2022

The North American Freshwater Migratory Fish Database (NAFMFD): Characterizing the migratory life histories of freshwater fishes of Canada, the United States and Mexico

Aim Migratory freshwater fishes are those that must access discrete habitats to complete their life cycles. Freshwater fish migrations occur around the world and provide numerous ecosystem services for humans and natural systems; however, many migratory species are in decline globally. A limiting factor to successfully conserve freshwater migratory fishes is that the migratory life histories of many species are unknown or only partially described. To provide researchers with critical and comprehensive information to conserve migratory fishes, we developed the North American Freshwater Migratory Fish Database (NAFMFD). Location Canada, Mexico and the United States. Taxon Freshwater fish. Methods To develop this database, we assigned migratory status, pattern and behaviour to a comprehensive list of freshwater fish species found throughout North America. We assembled the database which included assignments (i.e. migratory status, pattern and behaviour) as well as the sources used to make the assignments. Researchers and managers from across North America reviewed the database for completeness and accuracy on the migratory life histories of fishes. Results The database synthesizes current knowledge of migratory status, pattern and behaviour of native and non-native freshwater fishes throughout North America, including 1250 species representing 79 families and 325 genera. Results showcase the diversity of migratory life histories of freshwater fishes on the continent, including that at least 25% of North American freshwater fishes are migratory, 23% are non-migratory and 44% have undetermined migratory status. Main conclusions NAFMFD improves the quality of migratory data accessible to researchers, which supports a more holistic understanding of the threats encountered by migratory fishes, including habitat fragmentation. The approach we used in developing NAFMFD can provide guidance for developing similar databases in other regions. Collectively, our work offers new insights into the range of freshwater fish migratory life histories, stimulating a need to better understand this diversity globally.

Journal of Biogeography↗

USGS2021

A review of osmoregulation in lamprey

Lamprey are living representatives of the basal vertebrate agnathan lineage. Many lamprey species are anadromous with a complex life cycle that includes metamorphosis from a freshwater (FW) benthic filter-feeding larva into a parasitic juvenile which migrates to seawater (SW) or (in landlocked populations) large bodies of FW. After a juvenile/adult trophic period that can last up to two years, adults return to rivers and migrate upstream to spawn in FW. Therefore, the osmoregulatory challenges anadromous lamprey face during migrations are similar to those of derived diadromous jawed fishes because lamprey osmoregulate to maintain plasma osmolality at approximately one third SW as well. While in FW, lamprey gills actively take up ions and their kidneys excrete excess water to compensate for passive ion loss and water gain. When in SW, lamprey drink SW and their gills actively secrete excess ions (to compensate for salt loading and dehydration). Nevertheless, lampreys diverged from the rest of the vertebrate lineage more than 500 million years ago, which is reflected in similarities and differences in ionocyte (ion transport cell) ultrastructure and distribution as well as tight junctions in epithelia. The current review discusses recent advances in our understanding of ion transport mechanisms of lamprey with a focus on sea lamprey ( Petromyzon marinus ) due to the large literature on this species. We emphasize key molecular and cellular mechanisms in osmoregulatory organs (i.e., gill, kidney and gut) and provide insight relative to what is known in other fishes and identify areas where more research is needed.

Journal of Great Lakes Research↗

USGS2003

Review of techniques to prevent introduction of zebra mussels (Dreissena polymorpha) during native mussel (Unionoidea) conservation activities

Because of the declines in diversity and abundance of native freshwater mussels (superfamily Unionoidea), and the potential decimation of populations of native mussels resulting from the rapid spread of the exotic zebra mussel Dreissena polymorpha, management options to eliminate or reduce the threat of the zebra mussel are needed. Relocating native mussels to refugia (artificial and natural) has been proposed to mitigate the threat of zebra mussels to native species. Relocation of native mussels to refugia such as fish hatchery facilities or natural habitats within their historic range. Which are unlikely to be infested by zebra mussels, necessitates that protocols be developed to prevent the inadvertent introduction of zebra mussels. Several recent studies have developed Such protocols, and have assessed their effectiveness on the health and survival of native mussels during subsequent relocation to various refugia. The purpose of this project is to synthesize and evaluate the current protocols and to develop a set of procedures that resource managers and researchers should consider before conducting conservation activities in zebra mussel infested waters. We found that the existing protocols have many common points of concern, such as facility modification and suitability, zebra mussel risk assessment and management procedures, and health and disease management procedures. These conservation protocols may have broad applicability to other situations and locations. A summary and evaluation of the information in these main areas, along with recommended guidelines, are presented in this article.

Journal of Shellfish Research↗

USGS1983

Habitat Suitability Information: Blacknose dace

A review and synthesis of existing information were used to develop riverine and lacustrine habitat models for Blacknose dace, a freshwater species. The models are scaled to produce an index of habitat suitability between 0 (unsuitable habitat) to 1 (optimally suitable habitat) for freshwater, marine, and estuarine areas of the continental United States. Habitat suitability indexes (HSI's) are designed for use with the habitat evaluation procedures developed by the U.S. Fish and Wildlife Service. Also included are discussions of Suitability Index (SI) curves as used in the Instream Flow Incremental Methodology (IFIM) and SI curves available for an IFIM analysis of Blacknose dace.

FWS/OBS↗

USGS1983

Habitat Suitability Index Models: Fallfish

A review and synthesis of existing information were used to develop riverine and lacustrine habitat models for fallfish (Semotilis corporalis), a freshwater species. The models are scaled to produce an index of habitat suitability between 0 (unsuitable habitat) to 1 (optimally suitable habitat) for freshwater, marine and estuarine areas of the continental United States. Habitat suitability indexes (HSI's) are designed for use with the habitat evaluation procedures developed by the U.S. Fish and Wildlife Service. Also included are discussions of Suitability Index (SI) curves as used in the Instream Flow Incremental Methodology (IFIM) and SI curves available for an IFIM analysis of Fallfish habitat.

FWS/OBS↗

USGS1983

Habitat Suitability Index Models: Bigmouth buffalo

A review and synthesis of existing information were used to develop riverine and lacustrine habitat models for Bigmouth buffalo (Ictiobus cyprinellus), a freshwater fish. The models are scaled to produce an indices of habitat suitability between 0 (unsuitable habitat) and 1 (optimally suitable habitat) for freshwater areas of the continental United States. Other habitat suitability models found in the literature are also included. Habitat suitability indices (HSI's) are designed for use with the habitat evaluation procedures developed by the U.S. Fish and Wildlife Service.

FWS/OBS↗

USGS1983

Habitat Suitability Index Models: Longnose sucker

A review and synthesis of existing information were used to develop riverine and lacustrine habitat models for Longnose sucker (Catostomus catostomus), a freshwater fish. The models are scaled to produce an index of habitat suitability between 0 (unsuitable habitat) to 1 (optimally suitable habitat) for freshwater areas of the continental United States. Habitat suitability indexes (HSI's) are designed for use with the habitat evaluation procedures developed by the U.S. Fish and Wildlife Service.

FWS/OBS↗