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USGS2010

Extended abstracts from the Coastal Habitats in Puget Sound (CHIPS) 2006 Workshop

Puget Sound is the second largest estuary in the United States. Its unique geology, climate, and nutrient-rich waters produce and sustain biologically productive coastal habitats. These same natural characteristics also contribute to a high quality of life that has led to a significant growth in human population and associated development. This population growth, and the accompanying rural and urban development, has played a role in degrading Puget Sound ecosystems, including declines in fish and wildlife populations, water-quality issues, and loss and degradation of coastal habitats. In response to these ecosystem declines and the potential for strategic large-scale preservation and restoration, a coalition of local, State, and Federal agencies, including the private sector, Tribes, and local universities, initiated the Puget Sound Nearshore Ecosystem Restoration Project (PSNERP). The Nearshore Science Team (NST) of PSNERP, along with the U.S. Geological Survey, developed a Science Strategy and Research Plan (Gelfenbaum and others, 2006) to help guide science activities associated with nearshore ecosystem restoration. Implementation of the Research Plan includes a call for State and Federal agencies to direct scientific studies to support PSNERP information needs. In addition, the overall Science Strategy promotes greater communication with decision makers and dissemination of scientific results to the broader scientific community. On November 14–16, 2006, the U.S. Geological Survey sponsored an interdisciplinary Coastal Habitats in Puget Sound (CHIPS) Research Workshop at Fort Worden State Park, Port Townsend, Washington. The main goals of the workshop were to coordinate, integrate, and link research on the nearshore of Puget Sound. Presented research focused on three themes: (1) restoration of large river deltas; (2) recovery of the nearshore ecosystem of the Elwha River; and (3) effects of urbanization on nearshore ecosystems. The more than 35 presentations covered a wide range of ongoing inter-disciplinary research, including studies of sediment geochemistry of aquatic environments, sediment budgets, tracking fish pathways, expansion of invasive forams, beach and nearshore sedimentary environments, using influence diagrams as a decision support tool, forage fish, submarine groundwater, and much, much more. The primary focus within these themes was on developing information on the physical, chemical, and biological processes, as well as the human dimensions, associated with the restoration or rehabilitation of the nearshore environment. The workshop was an excellent opportunity for USGS scientists and collaborators who are working on Puget Sound coastal habitats to present their preliminary findings, discuss upcoming research, and to identify opportunities for interdisciplinary collaboration. A compilation of extended abstracts from workshop participants, this proceedings volume serves as a useful reference for attendees of the workshop and for those unable to attend. Taken together, the abstracts in this report provide a view of the current status of USGS multidisciplinary research on Puget Sound coastal habitats.

Open-File Report↗
USGS2021

The contribution of water radiolysis to marine sedimentary life

Water radiolysis continuously produces H 2 and oxidized chemicals in wet sediment and rock. Radiolytic H 2 has been identified as the primary electron donor (food) for microorganisms in continental aquifers kilometers below Earth’s surface. Radiolytic products may also be significant for sustaining life in subseafloor sediment and subsurface environments of other planets. However, the extent to which most subsurface ecosystems rely on radiolytic products has been poorly constrained, due to incomplete understanding of radiolytic chemical yields in natural environments. Here we show that all common marine sediment types catalyse radiolytic H 2 production, amplifying yields by up to 27X relative to pure water. In electron equivalents, the global rate of radiolytic H 2 production in marine sediment appears to be 1-2% of the global organic flux to the seafloor. However, most organic matter is consumed at or near the seafloor, whereas radiolytic H 2 is produced at all sediment depths. Comparison of radiolytic H 2 consumption rates to organic oxidation rates suggests that water radiolysis is the principal source of biologically accessible energy for microbial communities in marine sediment older than a few million years. Where water permeates similarly catalytic material on other worlds, life may also be sustained by water radiolysis.

Nature Communications↗
USGS2008

U.S. Geological Survey Karst Interest Group Proceedings, Bowling Green, Kentucky, May 27-29, 2008

*INTRODUCTION AND ACKNOWLEDGMENTS* Karst aquifer systems are present throughout parts of the United States and some of its territories. The complex depositional environments that form carbonate rocks combined with post-depositional tectonic events and the diverse climatic regimes under which these rocks were formed result in unique hydrologic systems. The dissolution of calcium carbonate and the subsequent development of distinct and beautiful landscapes, caverns, and springs have resulted in some karst areas of the United States being designated as national or state parks and commercial caverns. Karst aquifers and landscapes that form in tropical areas, such as the north coast of Puerto Rico, differ greatly from karst areas in more arid climates, such as central Texas or western South Dakota. Many of these public and private lands contain unique flora and fauna associated with the hydrologic systems in these karst areas. As a result, multiple Federal, State, and local agencies have an interest in the study of karst terrains. Carbonate sediments and rocks (limestone and dolomite) are composed of greater than 50 percent carbonate minerals and the predominant carbonate mineral is calcium carbonate or limestone (CaCO3). Unlike terrigenous clastic sedimentation, the depositional processes that produce carbonate rocks are complex, involving both biological and physical processes. These depositional processes impact greatly the development of permeability of the sediments. Carbonate minerals readily dissolve or precipitate depending on the chemistry of the water flowing through the rock, thus the study of both marine and meteoric diagenesis of carbonate sediments is multidisciplinary. Even with a better understanding of the depositional environment and subsequent diagenesis, the dual porosity nature of karst aquifers presents challenges to scientists attempting to study ground-water flow and contaminant transport. Many of the major springs and aquifers in the United States are developed in carbonate rocks and karst areas. These aquifers and the springs that discharge from them, serve as major water-supply sources and as unique biological habitats. Commonly, there is competition for the water resources of karst aquifers, and urban development in karst areas can impact the ecosystem and water quality of these aquifers. The concept for developing a Karst Interest Group evolved from the November 1999 National Ground-Water Meeting of the U.S. Geological Survey (USGS), Water Resources Division. As a result, the Karst Interest Group was formed in 2000. The Karst Interest Group is a loose-knit grass-roots organization of USGS employees devoted to fostering better communication among scientists working on, or interested in, karst hydrology studies. The mission of the Karst Interest Group is to encourage and support interdisciplinary collaboration and technology transfer among USGS scientists working in karst areas. Additionally, the Karst Interest Group encourages cooperative studies between the different disciplines of the USGS and other Department of Interior agencies and university researchers or research institutes. The first Karst Interest Group workshop was held in St. Petersburg, Florida, February 13-16, 2001, in the vicinity of karst features of the Floridan aquifer system. The proceedings of that first meeting, Water-Resources Investigations Report 01-4011 are available online at: http://water.usgs.gov/ogw/karst/ The second Karst Interest Group workshop was held August 20-22, 2002, in Shepherdstown, West Virginia, in close proximity to the carbonate aquifers of the northern Shenandoah Valley. The proceedings of the second workshop were published in Water-Resources Investigations Report 02-4174, which is available online at the previously mentioned website. The third workshop of the Karst Interest Group was held September, 12-15, 2005, in Rapid City, South Dakota, which is in close proximity to karst features

Scientific Investigations Report↗
USGS2015

Preliminary methodology to assess the national and regional impact of U.S. wind energy development on birds and bats

The U.S. Geological Survey has developed a methodology to assess the impacts of wind energy development on wildlife; it is a probabilistic, quantitative assessment methodology that can communicate to decision makers and the public the magnitude of these effects on species populations. The methodology is currently applicable to birds and bats, focuses primarily on the effects of collisions, and can be applied to any species that breeds in, migrates through, or otherwise uses any part of the United States. The methodology is intended to assess species at the national scale and is fundamentally different from existing methods focusing on impacts at individual facilities. Publicly available fatality information, population estimates, species range maps, turbine location data, biological characteristics, and generic population models are used to generate both a ranked list of species based on relative risk as well as quantitative measures of the magnitude of the effect on species' population trend and size. Three metrics are combined to determine direct and indirect relative risk to populations. A generic population model is used to estimate the expected change in population trend and includes additive mortality from collisions with wind turbines. Lastly, the methodology uses observed fatalities and an estimate of potential biological removal to assess the risk of a decline in population size. Data for six bird species have been processed through the entire methodology as a test case, and the results are presented in this report. Components of the methodology are based on simplifying assumptions and require information that, for many species, may be sparse or unreliable. These assumptions are presented in the report and should be carefully considered when using output from the methodology. In addition, this methodology can be used to recommend species for more intensive demographic modeling or highlight those species that may not require any additional protection because effects of wind energy development on their populations are projected to be small.

Scientific Investigations Report↗
USGS1972

Mass spectrometric analysis of organic compounds, water and volatile constituents in the atmosphere and surface of Mars: The Viking Mars Lander

An experiment centering around a mass spectrometer is described, which is aimed at the identification of organic substances present in the top 10 cm of the surface of Mars and an analysis of the atmosphere for major and minor constituents as well as isotopic abundances. In addition, an indication of the abundance of water in the surface and some information concerning the mineralogy can be obtained by monitoring the gases produced upon heating the soil sample. The organic material will simply be expelled by heating to 150°, 300°, and 500° into the carrier gas stream of a gas chromatograph interfaced to the mass spectrometer or by slowly heating the sample in direct communication with the spectrometer. It is planned to analyze a total of up to nine soil samples in order to study diurnal and seasonal variations. The system is designed to give useful data even for minor constituents if the total of organics should be as low as 5ppm. The spectrometer covers the mass range of 12–200 with adequate resolution. The results of these experiments, which are deliberately designed to cover a wide spectrum of possibilities independent of terrestrial models, are expected to produce a good picture of the planet's organic chemistry and its possible biological significance as well as allow conclusions regarding the history of the planet's atmosphere.

Icarus↗
USGS2016

INVASIVESNET towards an International Association for Open Knowledge on Invasive Alien Species

In a world where invasive alien species (IAS) are recognised as one of the major threats to biodiversity, leading scientists from five continents have come together to propose the concept of developing an international association for open knowledge and open data on IAS—termed “INVASIVESNET”. This new association will facilitate greater understanding and improved management of invasive alien species (IAS) and biological invasions globally, by developing a sustainable network of networks for effective knowledge exchange. In addition to their inclusion in the CBD Strategic Plan for Biodiversity, the increasing ecological, social, cultural and economic impacts associated with IAS have driven the development of multiple legal instruments and policies. This increases the need for greater co-ordination, co-operation, and information exchange among scientists, management, the community of practice and the public. INVASIVESNET will be formed by linking new and existing networks of interested stakeholders including international and national expert working groups and initiatives, individual scientists, database managers, thematic open access journals, environmental agencies, practitioners, managers, industry, non-government organisations, citizens and educational bodies. The association will develop technical tools and cyberinfrastructure for the collection, management and dissemination of data and information on IAS; create an effective communication platform for global stakeholders; and promote coordination and collaboration through international meetings, workshops, education, training and outreach. To date, the sustainability of many strategic national and international initiatives on IAS have unfortunately been hampered by time-limited grants or funding cycles. Recognising that IAS initiatives need to be globally coordinated and ongoing, we aim to develop a sustainable knowledge sharing association to connect the outputs of IAS research and to inform the consequential management and societal challenges arising from IAS introductions. INVASIVESNET will provide a dynamic and enduring network of networks to ensure the continuity of connections among the IAS community of practice, science and management.

Management of Biological Invasions↗
USGS1999

CFIRP: What we learned in the first ten years

In response to public dissatisfaction with forest management methods, we initiated the College of Forestry Integrated Research Project (CFIRP) to test alternative silvicultural systems in Douglas-fir (Pseudotsuga menziesii stands in western Oregon. We compared costs and biological and human responses among a control and three replicated silvicultural alternatives to clearcutting that retained structural features found in old Douglas-fir forests. Treatments were applied within 8- to 15-ha stands and attempted to mimic crown fires (modified clearcut), windthrow (green tree retention), and small-scale impacts such as root rot diseases (small patch group selection). We also compared costs in three unreplicated treatments (large patch group selection, wedge cut, and strip cut). Each treatment included differences in the pattern of retained dead trees (snags), as either scattered individuals or as clumps. Good communication among researchers and managers, a long-term commitment to the project, and careful documentation of research sites and data are important to the success of long-term silvicultural research projects. To date, over 30 publications have resulted from the project.

Conference Paper↗
USGS2016

Proceedings of the 12th Biennial Conference of research on the Colorado Plateau

Introduction The Colorado Plateau is a physiographic region that encompasses 330,000 square kilometers in parts of four states in the southwestern United States (Colorado, Utah, New Mexico, and Arizona). Known for its high deserts, the Colorado Plateau also includes isolated mountains, high plateaus, and rugged canyons. Not only is the region topographically diverse, but geologically, biologically, and culturally diverse as well. The landscape is managed by Federal entities including the Bureau of Land Management, the National Park Service, and the U.S. Forest Service; Tribal nations including the Navajo Nation, Kaibab Paiute, Mountain Ute, Southern Ute, Hopi, Zuni, Hualapai, Havasupai, and White Mountain Apache Tribes; State land and wildlife management agencies; and privately owned holdings, creating complex interactions and management challenges. Population growth, increased tourism to Federal and State lands, and energy development have increased water demands and altered land-use patterns, and these changes have emerged as management challenges facing the people working and living in the region. Climate change, particularly the ongoing drought, has exacerbated the effects of population growth, land-use change, and other stressors such as invasive species. As managers seek solutions to the challenges facing the region’s natural and cultural resources, the Biennial Conference of Science and Management of the Colorado Plateau has become an important venue for exchanging information about emerging management concerns and recent scientific research. Each biennial conference has sought to promote discussion, information sharing, and productive communication among the managers, scientists, students, administrators, tribal representatives, and others who attend the conference with the goal of enhancing the use of the best available science to manage the region’s incomparable natural and cultural resources. The publication and dissemination of a conference proceedings series expands the reach of the conference beyond those people in attendance and creates a record on the research presented. The idea of producing a conference proceedings, and its subsequent publication, first occurred in 1993 following the first biennial conference in 1991. A published volume of contributed papers has followed each subsequent biennial conference, including this volume. The venue for publishing proceedings has changed over the years and has included the National Park Service, the Government Printing Office, the U.S. Geological Survey, and University of Arizona Press. Recently, van Riper and others (2015) published a compilation of the abstracts from the 11 previous conference proceedings. Collectively, the proceedings highlight approximately 25 years of natural- and cultural-resources research, promoting the integration of research with resource management across the Colorado Plateau. This volume is freely downloadable by the public, thereby further expanding the influence of this conference beyond the Colorado Plateau. The 12th Biennial Conference held in Flagstaff, Arizona, from September 16 to 19, 2013, covered a range of topics in the physical, biological, and socio-cultural sciences. The conference was organized and hosted by Northern Arizona University’s ( NAU) Merriam-Powell Center for Environmental Research, the Colorado Plateau Cooperative Ecosystem Studies Unit, and the U.S. Geological Survey Southwest Biological Science Center. Financial and in-kind support was provided by a wide range of organizations including the U.S. Forest Service, National Park Service, Bureau of Land Management, Grand Canyon Trust, Colorado Plateau Research Station, and various NAU entities. NAU sponsors include the Landscape Conservation Initiative, School of Forestry, School of Earth Science and Environmental Sustainability, Office of the Provost, and Office of the Vice President of Research. Contributors to these proceedings include researchers and managers from Federal, State, and Tribal governments, universities, private entities, and non-profit organizations. In this regard, this conference has wide-ranging support and participation among private and public entities involved in the science and management of natural resources on the Colorado Plateau.

Arizona, Colorado, New Mexico, Utah↗
USGS2020

An interactive decision-making tool for evaluating biological and statistical standards of migrating fish survival past hydroelectric dams

Quantifying the downstream survival of migrating fish past dams is critical for conservation efforts. Regulators require assessments of survival as a condition of operation. Failure to meet an established survival standard may result in required operational or costly structural changes at a facility. Establishing the survival standard, as well as the rules of assessment, is a point of contention between regulators and operators. Management goals are based on biological criteria, but there are inherent statistical and probabilistic trade-offs when choosing a standard value and the method for assessment. We make a distinction between a “biological” goal (the conservation goal) and a “statistical” standard (a function of the biological goal, sample size, assessment method, and years of consecutive evaluation). An effective statistical standard maximizes true positives (passing the standard when the biological goal is being met) and true negatives (failing the standard when the goal is not being met), while minimizing false negatives and false positives. We explored the effects of sample size, true survival, and assessment methods on the probability of passing different statistical standards by simulating survival studies (simulating mark-recapture experiments). We observed a strong influence of assessment methods on the probability of making the right decision (true positive or true negative), especially when sample size, and recapture probability was low. As a support tool, we developed an interactive user interface to explore specific scenarios, and to aid communication among decision-makers.

River Research and Applications↗
USGS2001

Large carbon isotope fractionation associated with oxidation of methyl halides by methylotrophic bacteria

The largest biological fractionations of stable carbon isotopes observed in nature occur during production of methane by methanogenic archaea. These fractionations result in substantial (as much as ≈70‰) shifts in δ 13 C relative to the initial substrate. We now report that a stable carbon isotopic fractionation of comparable magnitude (up to 70‰) occurs during oxidation of methyl halides by methylotrophic bacteria. We have demonstrated biological fractionation with whole cells of three methylotrophs (strain IMB-1, strain CC495, and strain MB2) and, to a lesser extent, with the purified cobalamin-dependent methyltransferase enzyme obtained from strain CC495. Thus, the genetic similarities recently reported between methylotrophs, and methanogens with respect to their pathways for C 1 -unit metabolism are also reflected in the carbon isotopic fractionations achieved by these organisms. We found that only part of the observed fractionation of carbon isotopes could be accounted for by the activity of the corrinoid methyltransferase enzyme, suggesting fractionation by enzymes further along the degradation pathway. These observations are of potential biogeochemical significance in the application of stable carbon isotope ratios to constrain the tropospheric budgets for the ozone-depleting halocarbons, methyl bromide and methyl chloride. Methyl bromide (MeBr) and methyl chloride (MeCl) are, respectively, the most abundant volatile bromo- and chlorocarbons in the troposphere and are major contributors to stratospheric ozone destruction (1). Both compounds have natural and human-influenced sources and a predominant sink by reaction with OH in the troposphere (2–4). MeBr also has a bacterial soil sink (5) that represents about 20% of the estimated total removal from the troposphere, and it is likely that a soil sink of similar magnitude exists for MeCl (6). Hence, if an isotopic fractionation is associated with the soil sink, it will influence the isotopic compositions of MeBr and MeCl in the lower atmosphere (7). The δ 13 C value of industrially produced MeBr ranges between −43.5‰ and −66.4‰ (7), but δ 13 C values of tropospheric MeBr and natural sources are not yet known. The δ 13 C of atmospheric MeCl has been measured from −22‰ to −45‰ (8, 9). If carbon isotope ratios are to be used to constrain the budgets of these methyl halides, it is essential to determine the extent of carbon isotope fractionation that occurs during biological degradation of these compounds. Methylotrophic bacteria use C 1 compounds, which are simple organic molecules that contain no carbon–carbon bonds. Strains IMB-1, CC495, and MB2 are as-yet-unnamed facultative methylotrophs isolated from agricultural soil, woodland leaf litter, and coastal seawater, respectively (10–13), environments where methyl halides are produced. They are members of the α subgroup of the Proteobacteria . On the basis of 16S rRNA gene sequences, strains IMB-1 and CC495 show some phylogenetic alignment with the genus Rhizobium (10, 11) and are very closely related to the new genus Pseudoaminobacte r (I. McDonald, personal communication). Strain MB2 aligns within the Ruegeria clade [J. K. Schaefer, K. D. Goodwin, I. R. McDonald, J. C. Murrell and R.S.O., unpublished work]. All of these aerobic bacteria are methylotrophs in that they can grow by using MeBr or MeCl as their sole carbon source, but they do not metabolize methane. They oxidize MeBr, MeCl, and methyl iodide (MeI) to CO 2 . Soil bacteria are known to consume MeBr at the ambient tropospheric mixing ratio of around 10 parts per trillion by volume (5). Preliminary experiments with strain IMB-1 indicate that it can oxidize MeBr at these mixing ratios** and is therefore likely to be characteristic of bacteria associated with MeBr uptake by soils. We examined δ 13 C of MeCl, MeBr, and MeI during oxidation by whole-cell suspensions of IMB-1 and CC495 and also the change in δ 13 C values of the three methyl halides during oxidation by the marine strain MB2. In addition, we measured the fractionation of carbon isotopes during formation of methane thiol (MeSH) from MeCl by the purified cobalamin-dependent enzyme, halomethane:bisulphide/halide ion methyltransferase (11) from CC495, to determine whether this initial step in MeCl degradation could account for the observed fractionation by whole cells. Finally, we determined the fractionation associated with the degradation of MeBr during field studies with agricultural soil by monitoring MeBr concentration and δ 13 C of MeBr in the headspace of flux chambers under fumigation conditions.

Proceedings of the National Academy of Sciences of↗
USGS2001

Continuous flow stable isotope methods for study of δ 13 C fractionation during halomethane production and degradation

Gas chromatography/mass spectrometry/isotope ratio mass spectrometry (GC/MS/IRMS) methods for δ 13 C measurement of the halomethanes CH 3 Cl, CH 3 Br, CH 3 I and methanethiol (CH 3 SH) during studies of their biological production, biological degradation, and abiotic reactions are presented. Optimisation of gas chromatographic parameters allowed the identification and quantification of CO 2 , O 2 , CH 3 Cl, CH 3 Br, CH 3 I and CH 3 SH from a single sample, and also the concurrent measurement of δ 13 C for each of the halomethanes and methanethiol. Precision of δ 13 C measurements for halomethane standards decreased (±0.3, ±0.5 and ±1.3‰) with increasing mass (CH 3 Cl, CH 3 Br, CH 3 I, respectively). Given that carbon isotope effects during biological production, biological degradation and some chemical (abiotic) reactions can be as much as 100‰, stable isotope analysis offers a precise method to study the global sources and sinks of these halogenated compounds that are of considerable importance to our understanding of stratospheric ozone destruction.

Rapid Communications in Mass Spectrometry↗
USGS2018

Thresholds of lake and reservoir connectivity in river networks control nitrogen removal

Lakes, reservoirs, and other ponded waters are ubiquitous features of the aquatic landscape, yet their cumulative role in nitrogen removal in large river basins is often unclear. Here we use predictive modeling, together with comprehensive river water quality, land use, and hydrography datasets, to examine and explain the influences of more than 18,000 ponded waters on nitrogen removal through river networks of the Northeastern United States. Thresholds in pond density where ponded waters become important features to regional nitrogen removal are identified and shown to vary according to a ponded waters’ relative size, network position, and degree of connectivity to the river network, which suggests worldwide importance of these new metrics. Consideration of the interacting physical and biological factors, along with thresholds in connectivity, reveal where, why, and how much ponded waters function differently than streams in removing nitrogen, what regional water quality outcomes may result, and in what capacity management strategies could most effectively achieve desired nitrogen loading reduction.

Connecticut, Delaware, District of Columbia, Maine↗
USGS2020

Seasonality of biological and physical systems as indicators of climatic variation and change

Evidence-based responses to climate change by society require operational and sustained information including biophysical indicator systems that provide up-to-date measures of trends and patterns against historical baselines. Two key components linking anthropogenic climate change to impacts on socio-ecological systems are the periodic inter- and intra-annual variations in physical climate systems (seasonality) and in plant and animal life cycles (phenology). We describe a set of national indicators that reflect sub-seasonal to seasonal drivers and responses of terrestrial physical and biological systems to climate change and variability at the national scale. Proposed indicators and metrics include seasonality of surface climate conditions (e.g., frost and freeze dates and durations), seasonality of freeze/thaw in freshwater systems (e.g., timing of stream runoff and durations of lake/river ice), seasonality in ecosystem disturbances (e.g., wildfire season timing and duration), seasonality in vegetated land surfaces (e.g., green-up and brown-down of landscapes), and seasonality of organismal life-history stages (e.g., timings of bird migration). Recommended indicators have strong linkages to variable and changing climates, include abiotic and biotic responses and feedback mechanisms, and are sufficiently simple to facilitate communication to broad audiences and stakeholders interested in understanding and adapting to climate change.

Climatic Change↗
USGS2011

U.S. Geological Survey Karst Interest Group Proceedings, Fayetteville, Arkansas, April 26-29, 2011

Karst aquifer systems are present throughout parts of the United States and some of its territories and are developed in carbonate rocks (primarily limestone and dolomite) that span the entire geologic time frame. The depositional environments, diagenetic processes, and post-depositional tectonic events that form carbonate rock aquifers are varied and complex, involving both biological and physical processes that can influence the development of permeability. These factors, combined with the diverse climatic regimes under which karst development in these rocks has taken place result in the unique dual or triple porosity nature of karst aquifers. These complex hydrologic systems often present challenges to scientists attempting to study groundwater flow and contaminant transport. The concept for developing a Karst Interest Group evolved from the November 1999 National Groundwater Meeting of the U.S. Geological Survey (USGS), Water Resources Division. As a result, the Karst Interest Group was formed in 2000. The Karst Interest Group is a loose-knit grass-roots organization of USGS employees devoted to fostering better communication among scientists working on, or interested in, karst hydrology studies. The mission of the Karst Interest Group is to encourage and support interdisciplinary collaboration and technology transfer among USGS scientists working in karst areas. Additionally, the Karst Interest Group encourages cooperative studies between the different disciplines of the USGS and other Federal agencies, and university researchers or research institutes. This fifth workshop is a joint workshop of the USGS Karst Interest Group and University of Arkansas HydroDays workshop, sponsored by the USGS, the Department of Geosciences at the University of Arkansas in Fayetteville. Additional sponsors are: the National Cave and Karst Research Institute, the Edwards Aquifer Authority, San Antonio, Texas, and Beaver Water District, northwest Arkansas. The majority of funding for the proceedings preparation and workshop was provided by the USGS Groundwater Resources Program, National Cooperative Mapping Program, and the Regional Executives of the Northeast, Southeast, Midwest, South Central and Rocky Mountain Areas. The University of Arkansas provided the rooms and facilities for the technical and poster presentations of the workshop, vans for the field trips, and sponsored the HydroDays banquet at the Savoy Experimental Watershed on Wednesday after the technical sessions.

Scientific Investigations Report↗
USGS2019

Looking for love under the ice: Using passive acoustics to detect burbot (Lota lota: Gadidae) spawning activity

Burbot ( Lota lota : Gadidae) is a difficult species to manage effectively due to its preference for deep‐water habitats and under‐ice spawning behaviour, resulting in a poor understanding of its reproductive activity. However, the use of acoustic signalling by burbot as part of their mating system has recently been described and this behaviour may provide a means of investigating questions regarding the spatial and temporal distribution of spawning aggregations using passive acoustic monitoring. We used audio and video recording to confirm that burbot vocalise and that these vocalisations can be detected under field conditions as well as to characterise the relationship between burbot acoustic signalling and spawning behaviour. We also evaluated the feasibility of locating and monitoring burbot spawning aggregations in real time using passive acoustics. Burbot vocalisations were difficult to identify with only about 6% of the recordings containing calls being successfully identified as such in the field. Burbot vocalised more often between sundown and sunrise than during daylight hours. Calls recorded at night tended to be lower frequency, longer duration, and have lower bandwidth than those made during the day. Burbot vocalisations could not be recorded in conjunction with video recordings of spawning activity, indicating that burbot may not call during active spawning, but may use acoustic communication to signal the onset of reproductive readiness and to form pre‐spawning aggregations. While burbot calls were readily identifiable, observers had a difficult time identifying burbot calls in real time under field conditions. Passive acoustic monitoring demonstrates considerable potential as a management tool to locate burbot spawning grounds and identify periods of activity, but may not be an appropriate technique for monitoring spawning activity in real time.

British Columbia↗
USGS2023

Space-based Earth observation and ecosystem extent: Exploring opportunities

The purpose of this white paper is to explore and communicate potential new opportunities for using space-based Earth observation (EO) for monitoring biodiversity with a focus on ecosystem extent (the distribution of ecosystems on the Earth). It is part of a new activity of the Committee on Earth Observation Satellites (CEOS), a collaboration of the world’s space agencies that facilitates cross-agency coordination of EO. This activity, now manifested as the CEOS Ecosystem Extent Task Team, is focused on increasing the CEOS role in biodiversity applications, initially using ecosystem extent as a vehicle for discussion and exploration of ideas. The audience is two-fold: CEOS Principals that represent their agency, and the biodiversity community with a particular focus on the Convention on Biological Diversity (CBD) and their Parties as well as the UN System of Environmental-Economic Accounting (UN SEEA).

Report↗
USGS2011

Natural resource mitigation, adaptation and research needs related to climate change in the Great Basin and Mojave Desert

This report synthesizes the knowledge, opinions, and concerns of many Federal and State land managers, scientists, stakeholders, and partners from a workshop, held at the University of Nevada, Las Vegas, on April 20-22, 2010. Land managers, research scientists, and resource specialists identified common concerns regarding the potential effects of climate change on public lands and natural resources in the Great Basin and Mojave Desert and developed recommendations for mitigation, adaptation, and research needs. Water and, conversely, the effects of drought emerged as a common theme in all breakout sessions on terrestrial and aquatic species at risk, managing across boundaries, monitoring, and ecosystem services. Climate change models for the southwestern deserts predict general warming and drying with increasing precipitation variability year to year. Scientists noted that under these changing conditions the past may no longer be a guide to the future in which managers envision increasing conflicts between human water uses and sustaining ecosystems. Increasing environmental stress also is expected as a consequence of shifting ecosystem boundaries and species distributions, expansion of non-native species, and decoupling of biotic mutualisms, leading to increasingly unstable biologic communities. Managers uniformly expressed a desire to work across management and agency boundaries at a landscape scale but conceded that conflicting agency missions and budgetary constraints often impede collaboration. More and better science is needed to cope with the effects of climate change but, perhaps even more important is the application of science to management issues using the methods of adaptive management based on long-term monitoring to assess the merits of management actions. Access to data is essential for science-based land management. Basic inventories, spatial databases, baseline condition assessments, data quality assurance, and data sharing were identified as top information priorities by all participants at this workshop. Optimizing the utility of ecosystem monitoring data will require standardizing monitoring protocols across agencies. Better communication among researchers and managers and cooperation through partnerships to manage resources across boundaries were emphasized as necessary for adapting to changing climatic conditions. However, even these strategies may be insufficient unless policy mandates, agency missions, and funding are coordinated at a high level.

Scientific Investigations Report↗
USGS1998

The North American Bird Banding Program: Into the 21st century

The authors examined the legal, scientific, and philosophical underpinnings of the North American Bird Banding Program [BBP], with emphasis on the U.S. Bird Banding Laboratory [BBL], but also considering the Canadian Bird Banding Office [BBO]. In this report, we review the value of banding data, enumerate and expand on tile principles under which any modern BBP should operate, and from them derive our recommendations. These are cast into a Mission Statement, a Role and Function Statement, and a series of specific recommendations addressing five areas: (1) permitting procedures and practices; (2) operational issues; (3) data management; (4) BBL organization and staffing; and (5) implementation. Our major tenets and recommendations are as follows: banding provides valuable data for numerous scientific, management, and educational purposes, and its benefits far outweigh necessary biological and fiscal costs, especially those incurred by the BBL and BBO; because of the value of banding data for management of avian resources, including both game and nongame birds, government support of the program is fully justified and appropriate; all banding data, if collected to appropriate standards, are potentially valuable; there are many ways to increase the value of banding data such as by endorsing, promoting, and applying competence and/or training standards for permit issuance; promoting bander participation in well-designed projects; and by encouraging the use of banding data for meta-analytical approaches; the BBL should apply, promote, and encourage such standards, participation, and approaches; the BBP should be driven by the needs of users, including scientists and managers; all exchange of data and most communication between banders and the BBL should become electronic in the near future; the computer system at the BBL should be modernized to one designed for a true client-server relationship and storage of data in on-line relational databases; the BBL should continue to maintain high quality control and editing standards and should strive to bring all data in the database up to current standards; however, the BBL should transfer a major portion of the responsibility for editing banding data to the bander by providing software that will permit the bander to edit his/her own data electronically before submission to the BBL; the BBL should build the capacity to store additional data tied to original band records able to be pre-edited and submitted electronically, such as recapture data, appropriate data from auxiliary marking (e.g. resightings of color-marked birds), and other data that gain value when pooled from many banders (e.g., measurements); however, the BBL should only accept such data if they are collected using standardized methods and as part of an established program designed to utilize such data; now is the time to consider options for implementing a Western Hemisphere banding program, with leadership from the BBL; the Patuxent Electronic Data Processing Section should become part of the BBL; additional scientific and technical staff must be added to the BBL; an Implementation Team should be formed to expedite our recommendations, following timetables outlined in this document.

Journal of Field Ornithology↗