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Comparison of fishes in nearshore areas of the St. Lawrence River, New York over 35 years

Fishes of the nearshore waters of the St. Lawrence River provide forage for valuable sport fisheries and are important biological indicators of condition and change. This fish community differs slightly among various reaches of the St. Lawrence River from New York to Quebec (Carlson et al. 2006, Eckert and Hanlon 1977, Kapuscinski 2011, LaViolette et al. 2003, Mandrak et al. 2006, McKenna et al. 2005). Nearshore habitat has been described by McKenna et al. (2012), and others have suggested that there were changes over the last few decades (Clapsadl 1993, Kapuscinski and Farrell 2013). More definitive work needs to be completed on submerged aquatic vegetation habitats. In this paper, changes in the nearshore fish species composition for the New York reach from Cape Vincent to Moses-Saunders Dam are examined through comparison of results from 2009-2010 (McKenna et al. 2012) and 1976 surveys (Eckert and Hanlon 1977).

New York

Diet composition and fish consumption of double-crested cormorants from three St. Lawrence River colonies in 2013

Double-crested Cormorants ( Phalacrocorax auritus ) were first observed nesting in the upper St. Lawrence River at Strachan Island in 1992. Cormorants now nest at a number of islands in the Thousand Islands section of the river. Griswold, McNair, and Strachan islands are among the largest colonies in the upper river. Until 2011, nest counts had remained relatively stable, ranging from 200 to 603 nests per colony. However, since 2011 the number of nests at McNair Island have exceeded 700 each year. Although the size of cormorant colonies in the upper St. Lawrence River is smaller than those in the eastern basin of Lake Ontario, the close proximity of islands in the upper river that have colonies may cause a cumulative fish consumption effect similar to a larger colony. Because of increasing numbers of Double-crested Cormorants in the upper St. Lawrence River and the possible effects on fish populations, studies were initiated in 1999 to quantify cormorant diet and fish consumption at the three largest colonies. From 1999 to 2012, these studies have shown that cormorants consumed about 128.6 million fish including 37.5 million yellow perch ( Perca flavescens ), 17.4 million rock bass ( Ambloplites rupestris ) and 1.0 million smallmouth bass ( Micropterus dolemieu ) (Johnson et al. 2012). During this same time period fish assessment studies near some of these islands have shown a major decrease in yellow perch populations (Klindt 2007). This occurrence is known as the halo effect and happens when piscivorous birds deplete local fish populations in areas immediately surrounding the colony (Ashmole 1963). This paper describes the diet and fish consumption of cormorants in the upper St. Lawrence River in 2013.

New York

Benthic prey fish assessment, Lake Ontario 2013

The 2013 benthic fish assessment was delayed and shortened as a result of the U.S. Government shutdown, however the assessment collected 51 of the 62 planned bottom trawls. Over the past 34 years, Slimy Sculpin abundance in Lake Ontario has fluctuated, but ultimately decreased by two orders of magnitude, with a substantial decline occurring in the past 10 years. The 2013 Slimy Sculpin mean bottom trawl catch density (0.001 ind.·m-2, s.d.= 0.0017, n = 52) and mean biomass density (0.015 g·m-2 , s.d.= 0.038, n = 52) were the lowest recorded in the 27 years of sampling using the original bottom trawl design. From 2011-2013, the Slimy Sculpin density and biomass density has decreased by approximately 50% each year. Spring bottom trawl catches illustrate Slimy Sculpin and Round Goby Neogobius melanostoma winter habitat overlaps for as much as 7 months out of a year, providing opportunities for competition and predation. Invasive species, salmonid piscivory, and declines in native benthic invertebrates are likely all important drivers of Slimy Sculpin population dynamics in Lake Ontario. Deepwater Sculpin Myoxocephalus thompsonii, considered rare or absent from Lake Ontario for 30 years, have generally increased over the past eight years. For the first time since they were caught in this assessment, Deepwater Sculpin density and biomass density estimates declined from the previous year. The 2013 abundance and density estimates for trawls covering the standard depths from 60m to 150m was 0.0001 fish per square meter and 0.0028 grams per square meter. In 2013, very few small (< 80 mm) Deepwater Sculpin were caught and most sculpin were at sites of 150 meters or greater, which is in contrast to previous years when juvenile fish were caught around 80-100 meters. The reduced effort and late seasonal timing of the 2013 assessment make it difficult to have high confidence in declines observed in 2013, however observed Alewife Alosa psuedoharengus abundance increases and reduced juvenile Deepwater Sculpin catches are consistent with the hypothesis that Alewife negatively influence Deepwater Sculpin recruitment. Nonnative Round Gobies were first detected in the USGS/NYSDEC Lake Ontario spring Alewife assessment in 2002. Since that assessment, observations indicate their population has expanded and they are now found along the entire south shore of Lake Ontario, with the highest densities in U.S. waters just east of the Niagara River confluence. In the 2013 spring-based assessment, both the abundance and weight indices increased slightly as compared to 2012. The number index value of 16.6 was 30% of the maximum number observed in 2008 when the number index was 95.2. Round Goby density estimates from the 2013 fall benthic prey fish survey were 33 times greater than fall Slimy Sculpin density, indicating Round Goby are now the dominant Lake Ontario benthic prey fish.

Lake Ontario

Sources of subsidence at the Salton Sea Geothermal Field

At the Salton Sea Geothermal Field (SSGF) in Southern California, surface deformation associated with geologic processes including sediment compaction, tectonic strain, and fault slip may be augmented by energy production activities. Separating the relative contributions from natural and anthropogenic sources is especially important at the SSGF, which sits at the apex of a complex tectonic transition zone connecting the southern San Andreas Fault with the Imperial Fault; but this has been a challenging task so far. Here we analyze vertical surface velocities obtained from the persistent scatterer InSAR method and find that two of the largest subsidence anomalies can be represented by a set of volumetric strain nuclei at depths comparable to geothermal well completion zones. In contrast, the rates needed to achieve an adequate fit to the magnitudes of subsidence are almost an order of magnitude greater than rates reported for annual changes in aggregate net-production volume, suggesting that the physical mechanism responsible for subsidence at the SSGF is a complicated interplay between natural and anthropogenic sources.

California

Status of alewife and rainbow smelt in U.S. waters of Lake Ontario, 2015

In 2015 the joint USGS and NYSDEC surveys for Alewife and Rainbow Smelt were combined for the first time into a comprehensive spring pelagic prey fish survey. The adult Alewife abundance and weight indices in 2015 increased slightly from 2014 levels, and adult Alewife abundance has remained relatively stable for the past five years. Adult Alewife condition in both spring and fall increased from 2014 values and was above long-term means. Yearling Alewife abundance was the lowest observed in the 38-year time series. Alewife year class strength at age 1 is related to the number of spawning adults and summer temperatures and winter duration in the first year after hatching. Moderate year classes were produced during 2009-2011, and 2012 was the largest year class in the time series. However, severe winters in 2013-2014 and 2014-2015 contributed to two successive very small year classes for the first time in the time series. We expect adult Alewife abundance and biomass to decline in 2016 as older and larger fish decline in the population. The number of spawning adults increased in 2015, summer temperatures were slightly below average, and the anticipated winter duration is below average (i.e., milder winter) for 2015-2016, so these conditions will likely produce a low to moderate year class. A third successive weak year class could be problematic for the Lake Ontario Alewife population and may be of concern to binational lake managers. Rainbow Smelt were also assessed and the population continues to persist at a low and stable level.

Lake Ontario

Time series of suspended-solids concentration in Honker Bay during water year 1997

Suspended-solids concentration (SSC) responds differently to seasonal variations, such as Delta outflow and wind in shallow water areas than in deep-water channels. Although San Francisco Bay includes extensive areas of shallow water, with about one-half of the surface area of the Bay being less than 2 meters deep (Conomos and Peterson, 1977), deep-water channels along the spine of San Francisco Bay, not shallow waters, are generally sampled by the Regional Monitoring Program (RMP; SFEI, 1997) and the U.S. Geological Survey (USGS; Buchanan and Schoellhamer, 1996; Edmunds et al., 1997; Freeman et al., 1997). The purpose of this article is to provide an example of how SSC varies in shallow water. Time series of SSC were measured at several sites in Honker Bay. Measurements were made from December 1996 to March 1997 to observe the first wintertime freshwater flood pulse pushing salinity out of Honker Bay and delivering the first flush of sediment from the Central Valley watershed to the Bay. Instruments also were deployed from April to August 1997 to measure the return of salinity to Honker Bay as freshwater flow diminished, and to measure resuspension of sediment by wind-waves. Honker Bay was chosen because of its ecological significance to many estuarine plants and animals that depend on shallow waters for shelter and nourishment (Atwater et al., 1979; Cloern et al., 1983). Total concentrations of seven trace elements measured by the RMP are well correlated with SSC (Schoellhamer, 1997a, 1997b). Thus, the spatial and temporal variability of some trace elements of concern to the RMP is analogous to the SSC variability discussed in this article.

California

Central San Francisco Bay suspended-sediment transport processes study and comparison of continuous and discrete measurements of suspended-solids concentrations

Sediments are an important component of the San Francisco Bay estuarine system. Potentially toxic substances, such as metals and pesticides, adsorb to sediment particles. The sediments on the bottom of the Bay provide the habitat for benthic communities which can ingest these substances and introduce them into the food web. The bottom sediments are also a reservoir of nutrients. The transport and fate of suspended sediment is an important factor in determining the transport and fate of the constituents adsorbed on the sediment. Suspended sediments also limit light availability in the bay, which limits photosynthesis and primary production, and deposit in ports and shipping channels, which require dredging. Dredged materials are disposed in Central San Francisco Bay.

California

Central San Francisco Bay suspended-sediment transport processes and comparison of continuous and discrete measurements of suspended-solids concentrations

Sediments are an important component of the San Francisco Bay estuarine system. Potentially toxic substances, such as metals and pesticides, adsorb to sediment particles (Kuwabara and others, 1989; Domagalski and Kuivila, 1993). Sediments on the bottom of the bay provide the habitat for benthic communities that can ingest these substances and introduce them into the food web (Luoma and others, 1985). Nutrients, metals, and other substances are stored in bottom sediments and pore water in which chemical reactions occur and which provide an important source and/or sink to the water column (Hammond and others, 1985; Flegal and others, 1991). The transport and fate of suspended sediment is an important factor in determining the transport and fate of the constituents adsorbed on the sediment. Seasonal changes in sediment erosion and deposition patterns contribute to seasonal changes in the abundance of benthic macroinvertebrates (Nichols and Thompson, 1985). Tidal marshes are an ecologically important habitat that were created and are maintained by sedimentation processes (Atwater and others, 1979). In Suisun Bay, the maximum suspended-sediment concentration marks the position of the turbidity maximum, which is a crucial ecological region in which suspended sediment, nutrients, phytoplankton, zooplankton, larvae, and juvenile fish accumulate (Peterson and others, 1975; Arthur and Ball, 1979; Kimmerer, 1992; Jassby and Powell, 1994). Suspended sediments confine the photic zone to the upper part of the water column, and this limitation on light availability is a major control on phytoplankton production in San Francisco Bay (Cloern, 1987; Cole and Cloern, 1987). Suspended sediments also deposit in ports and shipping channels, which must be dredged to maintain navigation (U.S. Environmental Protection Agency, 1992).

California

Time series Of suspended-solids concentration, salinity, temperature, and total mercury concentration in San Francisco Bay during water year 1996

Many physical processes affect how constituents within San Francisco Bay vary. Processes and their associated time scales include turbulence (seconds), semidiurnal and diurnal tides (hours), the spring-neap tidal cycle (days), freshwater flow (weeks), seasonal winds (months), ecological and climatic changes (years), and geologic changes (thousands of years). The effect and relative importance of physical processes on the Bay can be determined from continuous time series of suspended-solids concentration (SSC), salinity, and water temperature. SSC time series and Regional Monitoring Program (RMP) waterquality data can be used to calculate time series of some trace-element concentrations (Schoellhamer, 1997). The purpose of this chapter is to qualitatively describe time series of SSC, salinity, water temperature, and mercury during water year 1996 (October 1995 through September 1996). In addition, a calculated time series of mercury will be used to evaluate the accuracy of using instantaneous water samples to evaluate a 4-day average water-quality objective.

California

Time series of trace element concentrations calculated from time series of suspended solids concentrations and RMP water samples: Summary and conclusions

The supply and fate of trace elements in San Francisco Bay, which are partially dependent upon particulate matter in the Estuary, are important management issues. San Francisco Bay receives many waste water discharges, especially in areas south of the Dumbarton Bridge, that contain trace elements that accumulate in benthic organisms (Luoma et al., 1985; Brown and Luoma, 1995). Trace elements tend to adsorb particulate matter (Kuwabara et al., 1989), so the fate of trace elements is partly determined by the fate of suspended solids. Concentrations of dissolved trace elements are greater in the South Bay than elsewhere in San Francisco Bay, and bottom sediments are believed to be a significant source (Flegal et al., 1991). The concentration of suspended particulate chromium in the Bay appears to be controlled primarily by sediment re-suspension (Abu-Saba and Flegal, 1995). Water quality standards for trace elements in the Bay are written in terms of total or near-total trace element concentrations (TEC). This summary has two objectives. The first is to demonstrate the relationship between suspended solids concentration (SSC) and TEC by developing equations relating SSC to total (or near-total) concentrations of trace elements based on Regional Monitoring Program (RMP) data collected during 1993 and 1994. The second objective is to demonstrate the temporal variability of TEC that are linearly correlated (LCTEC) with SSC by presenting time-series information on LCTEC based on nearly continuous SSC measurements collected during the 1995 water year (October 1, 1994 to September 30, 1995) and the SSC-LCTEC equations.

California

Lake Ontario benthic prey fish assessment, 2015

Benthic prey fishes are a critical component of the Lake Ontario food web, serving as energy vectors from benthic invertebrates to native and introduced piscivores. Since the late 1970’s, Lake Ontario benthic prey fish status was primarily assessed using bottom trawl observations confined to the lake’s south shore, in waters from 8 – 150 m (26 – 492 ft). In 2015, the Benthic Prey Fish Survey was cooperatively adjusted and expanded to address resource management information needs including lake-wide benthic prey fish population dynamics. Effort increased from 55 bottom trawl sites to 135 trawl sites collected in depths from 8 - 225m (26 – 738 ft). The spatial coverage of sampling was also expanded and occurred in all major lake basins. The resulting distribution of tow depths more closely matched the available lake depth distribution. The additional effort illustrated how previous surveys were underestimating lake-wide Deepwater Sculpin, Myoxocephalus thompsonii , abundance by not sampling in areas of highest density. We also found species richness was greater in the new sampling sites relative to the historic sites with 11 new fish species caught in the new sites including juvenile Round Whitefish, P rosopium cylindraceum , and Mottled sculpin, Cottus bairdii . Species-specific assessments found Slimy Sculpin, Cottus cognatus abundance increased slightly in 2015 relative to 2014, while Deepwater Sculpin and Round Goby, Neogobius melanostomus, dramatically increased in 2015, relative to 2014. The cooperative, lake-wide Benthic Prey Fish Survey expanded our understanding of benthic fish population dynamics and habitat use in Lake Ontario. This survey’s data and interpretations influence international resource management decision making, such as informing the Deepwater Sculpin conservation status and assessing the balance between sport fish consumption and prey fish populations. Additionally a significant Lake Ontario event occurred in May 2015 when a single juvenile Bloater Coregonus hoyi , was captured during the spring bottom trawl survey at 95m (312 ft) near Oswego, NY. This native, deep-water prey fish, last captured in Lake Ontario survey trawls in 1983, is part of an international, collaborative coregonid restoration effort in the Great Lakes.

Lake Ontario

Monitoring of oceanographic properties of Glacier Bay, Alaska 2004

Glacier Bay is a recently (300 years ago) deglaciated fjord estuarine system that has multiple sills, very deep basins, tidewater glaciers, and many streams. Glacier Bay experiences a large amount of runoff, high sedimentation, and large tidal variations. High freshwater discharge due to snow and ice melt and the presence of the tidewater glaciers makes the bay extremely cold. There are many small- and large-scale mixing and upwelling zones at sills, glacial faces, and streams. The complex topography and strong currents lead to highly variable salinity, temperature, sediment, primary productivity, light penetration, stratification levels, and current patterns within a small area. The oceanographic patterns within Glacier Bay drive a large portion of the spatial and temporal variability of the ecosystem. It has been widely recognized by scientists and resource managers in Glacier Bay that a program to monitor oceanographic patterns is essential for understanding the marine ecosystem and to differentiate between anthropogenic disturbance and natural variation. This year’s sampling marks the 12th continuous year of monitoring the oceanographic conditions at 23 stations along the primary axes within Glacier Bay, AK, making this a very unique and valuable data set in terms of its spatial and temporal coverage.

Alaska

Lake Ontario benthic prey fish assessment, 2016

Benthic prey fishes are a critical component of the Lake Ontario food web, serving as energy vectors from benthic invertebrates to native and introduced piscivores. Beginning in 1978, Lake Ontario benthic prey fishes were assessed using bottom trawls collected from the lake’s south shore (depth range: 8 – 150 m). Historically, the survey targeted the then dominant species, Slimy Sculpin, however in 2015, the Benthic Prey Fish Survey was cooperatively expanded to a whole-lake survey, to address resource management information needs related to Round Goby, Deepwater Sculpin, and nearshore native fishes. In 2016, 142 trawls were collected at 18 transects, and spanned depths from 6 – 225 m. Trawl catches indicated the benthic and demersal prey fish community was dominated by Round Goby, however the proportional importance of native Deepwater Sculpin is increasing. Species-specific assessments found lake-wide Round Goby density (~600 fish per hectare) was slightly lower in 2016 relative to 2015. Deepwater Sculpin density has generally increased since 2004. In 2016 their estimated density was greater than 100 fish per hectare. Slimy Sculpin density (15 fish/ha) was similar to the past 3 years. Catches of juvenile Slimy Sculpin continue to be low relative to historic catches and the timing of their decline coincides with the proliferation of Round Goby. Additionally, we found a strong negative relationship between trawl catches of Round Goby and near-shore native benthic and demersal fishes such as Trout-perch, Johnny Darter and Spottail Shiner. The introduction of Round Goby and the reappearance of native Deepwater Sculpin have shaped the Lake Ontario benthic prey fish community.

Lake Ontario

Acoustic assessment of pelagic planktivores, 2016

Alewife ( Alosa pseudoharengus ) and Rainbow Smelt ( Osmerus mordax ) are the most abundant pelagic planktivores in Lake Ontario (Weidel et al 2017), and the most important prey for salmon and trout, making up greater than 90% of the diet of the top predator, Chinook salmon (Lantry 2001, Brandt 1986), and supporting a multimillion dollar sportfishery. Alewife are also important prey for warm water predators, notably Walleye ( Sander vitreus ). Abundance of Alewife and smelt has declined since the 1980s, likely due to reduced nutrient loading, proliferation of invasive dreissenid mussels, and predation by stocked salmon and trout. Cisco ( Coregonus artedi ), a native planktivore, historically dominated the offshore pelagic prey fish of Lake Ontario, but their populations were severely reduced in the mid-20th century due to overfishing and competition with Alewife and smelt. Remnant populations of Cisco still exist, mostly in the eastern basin, and Cisco produce periodic strong year classes once or twice per decade (Owens et al 2003, most recently in 2012 and 2014 (OMNRF, 2017). Alewife ( Alosa pseudoharengus ) and Rainbow Smelt ( Osmerus mordax ) are the most abundant pelagic planktivores in Lake Ontario (Weidel et al 2017), and the most important prey for salmon and trout, making up greater than 90% of the diet of the top predator, Chinook salmon (Lantry 2001, Brandt 1986), and supporting a multimillion dollar sportfishery. Alewife are also important prey for warm water predators, notably Walleye ( Sander vitreus ). Abundance of Alewife and smelt has declined since the 1980s, likely due to reduced nutrient loading, proliferation of invasive dreissenid mussels, and predation by stocked salmon and trout. Cisco ( Coregonus artedi ), a native planktivore, historically dominated the offshore pelagic prey fish of Lake Ontario, but their populations were severely reduced in the mid-20th century due to overfishing and competition with Alewife and smelt. Remnant populations of Cisco still exist, mostly in the eastern basin, and Cisco produce periodic strong year classes once or twice per decade (Owens et al 2003, most recently in 2012 and 2014 (OMNRF, 2017).

Lake Ontario

2014 status of the Lake Ontario lower trophic levels

Soluble reactive phosphorus (SRP) concentrations have been stable in nearshore and offshore habitats since 1998 (0.4 – 3.3 μg/L). SRP concentrations were low in 2014; Apr/May – Oct mean values were <1 μg/L at most sites. Spring TP concentrations at individual sites exceeded 10 μg/L on occasion, but spring means were below the 10 μg/L target set by the Great Lakes Water Quality Agreement of 1978 for offshore waters of Lake Ontario. TP concentrations were low at both nearshore and offshore locations; Apr/May – Oct mean values from individual sites ranged from 4.6 – 9.1 μg/L. Spring TP has declined significantly in the longer data series (since 1981), but not since 1995 indicating stable nutrient loading into Lake Ontario for nearly two decades. It averaged 7.8 μg/L in the nearshore and 5.6 μg/L in the offshore in 2014. Chlorophyll-a and secchi depth values are indicative of oligotrophic conditions in nearshore and offshore habitats. Offshore summer chlorophyll-a declined significantly in both the short- (2000-2014) and long-term (1981-2014) time series at a rate of 4-6% per year. Nearshore chlorophyll-a increased after 2003 but then declined again after 2009. Epilimnetic chlorophyll-a averaged between 0.6 and 1.6 μg/L across sites with no difference between nearshore and offshore habitats. Apr/May – Oct Secchi depth ranged from 4.0 m to 10.8 m at individual sites and was higher in the offshore (average 9.1 m) than nearshore (5.9 m). In 2014, Apr/May – Oct epilimnetic zooplankton density, size, and biomass were not different between the offshore and the nearshore, and there were no differences in epilimnetic biomass between offshore and nearshore areas for any of the zooplankton groups. Zooplankton density and biomass peaked in September, an atypical pattern. This coincided with peaks in calanoid copepod, daphnid, and Holopedium biomass. Holopedium biomass in the nearshore increased significantly since 1995. The predatory cladoceran Cercopagis continued to be abundant in the summer, peaking at ~10 mg/m3in the offshore. Bythotrephes biomass was at its lowest level since 2005 in both offshore and nearshore habitats. Summer nearshore zooplankton density and biomass have declined significantly since 1995 at rates of 9-10% per year but have remained stable since 2005. However, bosminids and daphnids increased in 2013 and 2014. Summer offshore zooplankton density and biomass declined significantly in the long-term (since 1981), but remained at a lower stable level 2000 – 2014. A positive change point in 2013 is due to increases in bosminids, cyclopoid copepods, and daphnids. The observed decline in zooplankton biomass may be due in part to redistribution of zooplankton throughout the water column. Most of the zooplankton biomass was in the metalimnion and hypolimnion during the stratified period in 2014. By October, the bulk of the biomass was in the epilimnion.

Lake Ontario

2015 status of the Lake Ontario lower trophic levels

Offshore spring total phosphorus (TP) in 2015 was 4.2 μ g/L, the same as in 2014; this is lower than 2001 - 2013, but there is no significant time trend 2001 - 2015. Offshore soluble reactive phosphorus (SRP) was very low in 2015; Apr/May - Oct mean values were <1 μ g/L at most sites. SRP has been stable in nearshore and offshore habitats since 1998 (range, 0.4 – 3.3 μ g/L). TP concentrations were low at both nearshore and offshore locations (range 4.2 - 8.1 μ g/L), and TP and SRP concentrations were significantly higher in the nearshore as compared to the offshore (6.8 μ g/L vs 4.8 μ g/L, TP; 1.1 μ g/L vs 0.7 μ g/L, SRP). Chlorophyll- a and Secchi depth values are indicative of oligotrophic conditions in nearshore and offshore habitats. Offshore summer chlorophyll- a declined significantly 2000 - 2015. Nearshore chlorophyll- a increased 1995 - 2004 but then declined 2005 - 2015. Epilimnetic chlorophyll- a averaged between 0.9 and 1.9 1 μg/L across sites, and offshore concentrations (1.4 1 μg/L) were significantly higher than nearshore (1.1 μg/L). Summer Secchi depth increased significantly in the offshore 2000 -2015 and showed no trend in the nearshore, 1995 - 2015. Apr/May - Oct Secchi depth ranged from 5.0 m to 13.0 m at individual sites and was higher in the offshore (9.5 m) than nearshore (6.2 m). In 2015, Apr/May - Oct epilimnetic zooplankton density, size, and biomass were not different between the offshore and the nearshore, but cyclopoid biomass was higher in the offshore (8.3 mg/m 3 vs 2.0 mg/m 3 ) and Bythotrephes biomass was higher in the nearshore (0.17 mg/m 3 vs 0.04 mg/m 3 ). Zooplankton density and biomass peaked in September, an atypical pattern. This coincided with peaks in calanoid copepod, daphnid, and Holopedium Holopedium biomass in the nearshore has increased significantly since 1995. The predatory cladoceran Cercopagis continued to be abundant in summer in the nearshore (3.4 μ g/L) but not in the offshore (0.8 μ g/L). Bythotrephes biomass was very low (<0.3 μ g/L) in both nearshore and offshore habitats. Combined biomass of these predatory cladocerans in the offshore was the lowest recorded since 2001. Summer nearshore zooplankton density and biomass declined significantly 1995 - 2004 and then increased significantly 2005 – 2015. The decline was due to reductions in bosminids and cyclopoids and the increase was due mostly to a rebound in bosminids. Summer offshore zooplankton density and biomass increased significantly 2005 - 2015. The increase was due to an increase in bosminids and cyclopoids. In 2015, offshore summer epilimnetic zooplankton biomass was 52 mg/m 3 (2005 - 2014 mean=18 mg/m 3 ). Most zooplankton biomass was found in the metalimnion in July and in the hypolimnion in September. Cyclopoids and Limnocalanus dominated the metalimnion and Limnocalanus dominated the hypolimnion. Whole water column samples taken show a stable zooplankton biomass but changing community composition since 2010. Cyclopoids increased 2013 - 2015 and daphnids declined 2014 - 2015.

Lake Ontario

Bottom trawl assessment of Lake Ontario prey fishes

Managing Lake Ontario fisheries in an ecosystem-context requires prey fish community and population data. Since 1978, multiple annual bottom trawl surveys have quantified prey fish dynamics to inform management relative to published Fish Community Objectives. In 2017, two whole-lake surveys collected 341 bottom trawls (spring: 204, fall: 137), at depths from 8-225m, and captured 751,350 fish from 29 species. Alewife were 90% of the total fish catch while Deepwater Sculpin, Round Goby, and Rainbow Smelt comprised the majority of the remaining total catch (3.8, 3.1, and 1.1% respectively). The adult Alewife abundance index for US waters increased in 2017 relative to 2016, however the index for Canadian waters declined. Adult Alewife condition, assessed by the predicted weight of a 165 mm fish (6.5 inches), declined in 2017 from record high values observed in spring 2016. Spring 2017 Alewife condition was slightly less than the 10-year average, but the fall value was well below the 10-year average, likely due to increased Age-1 Alewife abundance. The Age-1 Alewife abundance index was the highest observed in 40 years, and 8-times higher than the previous year. The Age-1 index estimates Alewife reproductive success the preceding year. The warm summer and winter of 2016 likely contributed to the large year class. In contrast the relatively cool 2017 spring and cold winter may result in a lower than average 2017 year class. Abundance indices for Rainbow Smelt, Cisco, and Emerald Shiner either declined or remained at low levels in 2017. Pelagic prey fish diversity continues to be low since a single species, Alewife, dominates the catch. Deepwater Sculpin were the most abundant benthic prey fish in 2017 because Round Goby abundance declined sharply from 2016. Slimy Sculpin density continued to decline and the 2017 biomass index for US waters was the lowest ever observed. Prior to Round Goby proliferation, juvenile Slimy Sculpin comprised ~10% of the Slimy Sculpin catch, but since 2004, the percent of juveniles within the total catch is less than 0.5%, suggesting Round Goby are limiting Slimy Sculpin reproduction. Despite Slimy Sculpin declines, benthic prey fish community diversity has increased as Deepwater Sculpin and Round Goby comprise more of the community.

Lake Ontario