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At least 847 records · Page 47Linked to original sources
USGS2023

Mangrove reforestation provides greater blue carbon benefit than afforestation for mitigating global climate change

Significant efforts have been invested to restore mangrove forests worldwide through reforestation and afforestation. However, blue carbon benefit has not been compared between these two silvicultural pathways at the global scale. Here, we integrated results from direct field measurements of over 370 restoration sites around the world to show that mangrove reforestation (reestablishing mangroves where they previously colonized) had a greater carbon storage potential per hectare than afforestation (establishing mangroves where not previously mangrove). Greater carbon accumulation was mainly attributed to favorable intertidal positioning, higher nitrogen availability, and lower salinity at most reforestation sites. Reforestation of all physically feasible areas in the deforested mangrove regions of the world could promote the uptake of 671.5–688.8 Tg CO 2 -eq globally over a 40-year period, 60% more than afforesting the same global area on tidal flats (more marginal sites). Along with avoiding conflicts of habitat conversion, mangrove reforestation should be given priority when designing nature-based solutions for mitigating global climate change.

Nature Communications↗
USGS2024

Biodiversity loss reduces global terrestrial carbon storage

Natural ecosystems store large amounts of carbon globally, as organisms absorb carbon from the atmosphere to build large, long-lasting, or slow-decaying structures such as tree bark or root systems. An ecosystem’s carbon sequestration potential is tightly linked to its biological diversity. Yet when considering future projections, many carbon sequestration models fail to account for the role biodiversity plays in carbon storage. Here, we assess the consequences of plant biodiversity loss for carbon storage under multiple climate and land-use change scenarios. We link a macroecological model projecting changes in vascular plant richness under different scenarios with empirical data on relationships between biodiversity and biomass. We find that biodiversity declines from climate and land use change could lead to a global loss of between 7.44-103.14 PgC (global sustainability scenario) and 10.87-145.95 PgC (fossil-fueled development scenario). This indicates a self-reinforcing feedback loop, where higher levels of climate change lead to greater biodiversity loss, which in turn leads to greater carbon emissions and ultimately more climate change. Conversely, biodiversity conservation and restoration can help achieve climate change mitigation goals.

Nature Communications↗
USGS2026

Functional restructuring of the global soil microbiome under multiple stressors

Microbes, as the planet’s most abundant and diverse organisms, drive soil functions globally and are vulnerable to environmental stressors triggered by global change. Yet, knowledge regarding the impacts of multiple environmental stressors on their functional profiles as well as the consequences for soil functionality largely remains unknown. Here, we analyze two global-scale datasets including information on soil metagenomics and multiple environmental stressors. We find that across terrestrial ecosystems worldwide, up to 60% of all functional genes significantly shift when soil microbes experience the high-level of concurrent stressors. In this regard, the relative abundances of genes involved in microbial growth are negatively linked to the increasing number of stressors. Conversely, those genes linked to stress resistance and energy production exhibit positive responses. Taken together, our findings highlight a significant restructuring of global soil functional microbiomes in response to multiple environmental stressors. Consequently, such restructuring drives community-level shifts in matter and energy reallocations, thereby impacting the maintenance of soil functionality under the projected global change.

Nature Communications↗
USGS2025

Fungal impacts on Earth’s ecosystems

Over the past billion years, the fungal kingdom has diversified to more than two million species, with over 95% still undescribed. Beyond the well-known macroscopic mushrooms and microscopic yeast, fungi are heterotrophs that feed on almost any organic carbon, recycling nutrients through the decay of dead plants and animals and sequestering carbon into Earth’s ecosystems. Human-directed applications of fungi extend from leavened bread, alcoholic beverages and biofuels to pharmaceuticals, including antibiotics and psychoactive compounds. Conversely, fungal infections pose risks to ecosystems ranging from crops to wildlife to humans; these risks are driven, in part, by human and animal movement, and might be accelerating with climate change. Genomic surveys are expanding our knowledge of the true biodiversity of the fungal kingdom, and genome-editing tools make it possible to imagine harnessing these organisms to fuel the bioeconomy. Here, we examine the fungal threats facing civilization and investigate opportunities to use fungi to combat these threats.

Nature↗
USGS2023

Global dataset of soil organic carbon in tidal marshes

Tidal marshes store large amounts of organic carbon in their soils. Field data quantifying soil organic carbon (SOC) stocks provide an important resource for researchers, natural resource managers, and policy-makers working towards the protection, restoration, and valuation of these ecosystems. We collated a global dataset of tidal marsh soil organic carbon (MarSOC) from 99 studies that includes location, soil depth, site name, dry bulk density, SOC, and/or soil organic matter (SOM). The MarSOC dataset includes 17,454 data points from 2,329 unique locations, and 29 countries. We generated a general transfer function for the conversion of SOM to SOC. Using this data we estimated a median (± median absolute deviation) value of 79.2 ± 38.1 Mg SOC ha −1 in the top 30 cm and 231 ± 134 Mg SOC ha −1 in the top 1 m of tidal marsh soils globally. This data can serve as a basis for future work, and may contribute to incorporation of tidal marsh ecosystems into climate change mitigation and adaptation strategies and policies.

Scientific Data↗
USGS2018

Acquisition and dissemination of cephalosporin-resistant E. coli in migratory birds sampled at an Alaska landfill as inferred through genomic analysis

Antimicrobial resistance (AMR) in bacterial pathogens threatens global health, though the spread of AMR bacteria and AMR genes between humans, animals, and the environment is still largely unknown. Here, we investigated the role of wild birds in the epidemiology of AMR Escherichia coli. Using next-generation sequencing, we characterized cephalosporin-resistant E. coli cultured from sympatric gulls and bald eagles inhabiting a landfill habitat in Alaska to identify genetic determinants conferring AMR, explore potential transmission pathways of AMR bacteria and genes at this site, and investigate how their genetic diversity compares to isolates reported in other taxa. We found genetically diverse E. coli isolates with sequence types previously associated with human infections and resistance genes of clinical importance, including blaCTX-M and blaCMY. Identical resistance profiles were observed in genetically unrelated E. coli isolates from both gulls and bald eagles. Conversely, isolates with indistinguishable core-genomes were found to have different resistance profiles. Our findings support complex epidemiological interactions including bacterial strain sharing between gulls and bald eagles and horizontal gene transfer among E. coli harboured by birds. Results suggest that landfills may serve as a source for AMR acquisition and/or maintenance, including bacterial sequence types and AMR genes relevant to human health.

Alaska↗
USGS2023

Ticks harbor and excrete chronic wasting disease prions

Chronic wasting disease (CWD) is a fatal neurodegenerative disease caused by infectious prions (PrP CWD ) affecting cervids. Circulating PrP CWD in blood may pose a risk for indirect transmission by way of hematophagous ectoparasites acting as mechanical vectors. Cervids can carry high tick infestations and exhibit allogrooming, a common tick defense strategy between conspecifics. Ingestion of ticks during allogrooming may expose naïve animals to CWD, if ticks harbor PrP CWD . This study investigates whether ticks can harbor transmission-relevant quantities of PrP CWD by combining experimental tick feeding trials and evaluation of ticks from free-ranging white-tailed deer ( Odocoileus virginianus ). Using the real-time quaking-induced conversion (RT-QuIC) assay, we show that black-legged ticks ( Ixodes scapularis ) fed PrP CWD -spiked blood using artificial membranes ingest and excrete PrP CWD . Combining results of RT-QuIC and protein misfolding cyclic amplification, we detected seeding activity from 6 of 15 (40%) pooled tick samples collected from wild CWD-infected white-tailed deer. Seeding activities in ticks were analogous to 10–1000 ng of CWD-positive retropharyngeal lymph node collected from deer upon which they were feeding. Estimates revealed a median infectious dose range of 0.3–42.4 per tick, suggesting that ticks can take up transmission-relevant amounts of PrP CWD and may pose a CWD risk to cervids.

Wisconsin↗
USGS2024

Detection of prions from spiked and free-ranging carnivore feces

Chronic wasting disease (CWD) is a highly contagious, fatal neurodegenerative disease caused by infectious prions (PrP CWD ) affecting wild and captive cervids. Although experimental feeding studies have demonstrated prions in feces of crows ( Corvus brachyrhynchos ), coyotes ( Canis latrans ), and cougars ( Puma concolor ), the role of scavengers and predators in CWD epidemiology remains poorly understood. Here we applied the real-time quaking-induced conversion (RT-QuIC) assay to detect PrP CWD in feces from cervid consumers, to advance surveillance approaches, which could be used to improve disease research and adaptive management of CWD. We assessed recovery and detection of PrP CWD by experimental spiking of PrP CWD into carnivore feces from 9 species sourced from CWD-free populations or captive facilities. We then applied this technique to detect PrP CWD from feces of predators and scavengers in free-ranging populations. Our results demonstrate that spiked PrP CWD is detectable from feces of free-ranging mammalian and avian carnivores using RT-QuIC. Results show that PrP CWD acquired in natural settings is detectable in feces from free-ranging carnivores, and that PrP CWD rates of detection in carnivore feces reflect relative prevalence estimates observed in the corresponding cervid populations. This study adapts an important diagnostic tool for CWD, allowing investigation of the epidemiology of CWD at the community-level.

Scientific Reports↗
USGS2025

Warming Alaskan rivers affect first-year growth in critical northern food fishes

Arctic and subarctic rivers are warming rapidly, with unknown consequences for migratory fishes and the human communities dependent on them. To date, few studies have provided a comprehensive assessment of possible climate change impacts on the hydrology and temperature of Arctic rivers at the regional scale, and even fewer have connected those changes to multiple fish species with input and guidance from Indigenous communities. We used climate, hydrologic, and fish-growth simulations of historical (1990–2021) and future (2034–2065) young-of-year (YOY) growth potential of Chinook salmon ( Oncorhynchus tshawytscha ) and Dolly Varden ( Salvelinus malma ) for seven river basins in the Arctic-Yukon-Kuskokwim (AYK) region of Alaska, USA and Yukon Territory, Canada. Historically, summer water temperatures of all river basins remained below thresholds regarded as deleterious for Chinook salmon (14.6 °C) and Dolly Varden (16 °C), even in the warmest years. However, by the mid-century, Chinook salmon growth was limited, with declines in the warmest years in most river basins. Conversely, Dolly Varden are expected to benefit, with a near-doubling in growth projections in all river basins. This suggests that there may be an increase in suitable habitat for Dolly Varden by mid-century. The results highlight species-specific consequences of climate change and can guide future research on refugia for these species of cultural and subsistence importance to Indigenous communities in the AYK region and throughout the Arctic.

Alaska↗
USGS2025

Greenhouse gas emissions from ditches in oil palm plantations on tropical peatlands in Malaysia

Tropical peatlands, which store 20% of global peat carbon, are increasingly threatened by conversion to alternative land-uses such as oil palm plantations, pulp wood plantations, crop growth or other economic activities. This transformation involves peatland drainage, which lowers water tables, exposes peat to oxygen, and alters greenhouse gas (GHG) emissions: increasing carbon dioxide (CO 2 ) and nitrous oxide (N 2 O) fluxes while reducing methane (CH 4 ) emissions from soils. However, drainage ditches created in the process may become significant sources of CH 4 due to anoxic conditions. This study quantified GHG fluxes from drainage ditches in Sarawak, Malaysia, through spatial sampling conducted during the daytime in the transitional period between the drier and wetter seasons using portable trace gas analyzers. Median fluxes were 0.19 g CH 4 m −2 d −1 , 17.1 g CO 2 m −2 d −1 , and − 0.12 mg N 2 O m −2 d −1 . Physical water parameters such as pH, oxygen concentration, temperature, and oxidation–reduction potential were found to be significant drivers of GHG fluxes. The median emissions from ditches in one hectare of land were 5.84 kg CO 2 ha −1 d −1 , 2.78 kg CH 4 as CO 2 eq ha −1 d −1 , and − 0.001 kg N 2 O as CO 2 eq ha −1 d −1 . These findings underscore the role of drainage ditches as CH 4 sources in tropical peatland agriculture, highlighting the need for further research into GHG management in these modified landscapes.

Scientific Reports↗
USGS2025

Interspecific interactions moderate direct effects of vegetation change resulting from prescribed fires

Savannas depend on frequent, low-intensity fires that shape animal and plant communities. These fires alter animal populations, movement, and habitat use. Here, we report on how fires in a longleaf pine (Pinus palustris) savanna affected small mammal microhabitat use via changes in competition and predation. We monitored small mammal populations and vegetation subjected to biennial prescribed fires and compared microhabitat use of three small mammal populations [hispid cotton rats (Sigmodon hispidus), cotton mice (Peromyscus gossypinus) and oldfield mice (Peromyscus polionotus)] in the presence and absence of mesocarnivores while accounting for changes in density and movement of each small mammal species. Densities of cotton rats varied greatly across years but were similar between predator exclosures and controls. However, frequency of use was greater in exclosures than in controls irrespective of vegetation characteristics, suggesting predation risk altered cotton rat microhabitat use. Conversely, higher relative abundance of cotton rats was associated with lower cotton mouse and oldfield mouse use, suggesting spatial separation in niche and indicating that cotton mice expand their realized niche following predation-induced declines of cotton rats associated with prescribed burn events. Our results contribute to a better understanding of pyrodiversity and how interspecific interactions can moderate effects of vegetation changes following prescribed fires.

Georgia↗
USGS2026

Drift and dispersion of silver carp (Hypophthalmichthys molitrix) eggs and larvae for hypothetical spawning scenarios in the Upper Mississippi River

Invasive carp pose ecological and economic risks to North American freshwater systems. This study uses the Fluvial Egg Drift Simulator to model the drift of invasive silver carp ( Hypophthalmichthys molitrix) eggs and larvae after hypothetical spawning in Pools 1–10 of the Upper Mississippi River. Although adult invasive carps have been detected in this region, no reproduction has been confirmed as of this publication. A total of 450 spawning scenarios were simulated, representing 5 water temperatures, 9 flows, and 10 spawning locations in the tailwaters of lock and dam structures. The study examined egg and larval positions at two key developmental stages: hatching and gas bladder inflation, when larvae seek nursery habitat. Under a wide variety of flow conditions and water temperatures, eggs spawned upstream from Lake Pepin (Pool 4) are likely to settle in the lake before hatching, possibly increasing mortality rates. Eggs that survive passage through Lake Pepin reach gas bladder inflation within the study area, except in scenarios with lower temperatures and higher flows. Conversely, larvae spawned downstream from Lake Pepin generally drift out of the study area before reaching gas bladder inflation, except in cases of higher temperatures and lower flows. These findings inform ichthyoplankton sampling strategies and management actions aimed at reducing invasive carp populations in areas likely to support recruitment.

Iowa, Minnesota, Wisconsin↗
USGS2015

Water from air: An overlooked source of moisture in arid and semiarid regions

Water drives the functioning of Earth’s arid and semiarid lands. Drylands can obtain water from sources other than precipitation, yet little is known about how non-rainfall water inputs influence dryland communities and their activity. In particular, water vapor adsorption – movement of atmospheric water vapor into soil when soil air is drier than the overlying air – likely occurs often in drylands, yet its effects on ecosystem processes are not known. By adding 18 O-enriched water vapor to the atmosphere of a closed system, we documented the conversion of water vapor to soil liquid water across a temperature range typical of arid ecosystems. This phenomenon rapidly increased soil moisture and stimulated microbial carbon (C) cycling, and the flux of water vapor to soil had a stronger impact than temperature on microbial activity. In a semiarid grassland, we also observed that non-rainfall water inputs stimulated microbial activity and C cycling. Together these data suggest that, during rain-free periods, atmospheric moisture in drylands may significantly contribute to variation in soil water content, thereby influencing ecosystem processes. The simple physical process of adsorption of water vapor to soil particles, forming liquid water, represents an overlooked but potentially important contributor to C cycling in drylands.

Scientific Reports↗
USGS2008

Development of a standard reference material for Cr(vi) in contaminated soil

Over the last several decades, considerable contamination by hexavalent chromium has resulted from the land disposal of Chromite Ore Processing Residue (COPR). COPR contains a number of hexavalent chromium-bearing compounds that were produced in high temperature industrial processes. Concern over the carcinogenic potential of this chromium species, and its environmental mobility, has resulted in efforts to remediate these waste sites. To provide support to analytical measurements of hexavalent chromium, a candidate National Institute of Standards and Technology (NIST) Standard Reference Material?? (SRM 2701), having a hexavalent chromium content of approximately 500 mg kg -1, has been developed using material collected from a waste site in Hudson County, New Jersey, USA. The collection, processing, preparation and preliminary physico-chemical characterization of the material are discussed. A two-phase multi-laboratory testing study was carried out to provide data on material homogeneity and to assess the stability of the material over the duration of the study. The study was designed to incorporate several United States Environmental Protection Agency (USEPA) determinative methods for hexavalent chromium, including Method 6800 which is based on speciated isotope dilution mass spectrometry (SIDMS), an approach which can account for chromium species inter-conversion during the extraction and measurement sequence. This journal is ?? The Royal Society of Chemistry 2008.

Journal of Analytical Atomic Spectrometry↗
USGS2024

Hair mercury isotopes, a noninvasive biomarker for dietary methylmercury exposure and biological uptake

Background . Fish and rice are the main dietary sources of methylmercury (MeHg); however, rice does not contain the same beneficial nutrients as fish, and these differences can impact the observed health effects of MeHg. Hence, it is important to validate a biomarker, which can distinguish among dietary MeHg sources. Methods . Mercury (Hg) stable isotopes were analyzed in hair samples from peripartum mothers in China ( n = 265). Associations between mass dependent fractionation (MDF) ( δ 202 Hg) and mass independent fractionation (MIF) ( Δ 199 Hg) (dependent variables) and dietary MeHg intake (independent variable) were investigated using multivariable regression models. Results . In adjusted models, hair Δ 199 Hg was positively correlated with serum omega-3 fatty acids (a biomarker for fish consumption) and negatively correlated with maternal rice MeHg intake, indicating MIF recorded in hair can be used to distinguish MeHg intake predominantly from fish versus rice. Conversely, in adjusted models, hair δ 202 Hg was not correlated with measures of dietary measures of MeHg intake. Instead, hair δ 202 Hg was strongly, negatively correlated with hair Hg, which explained 27–29% of the variability in hair δ 202 Hg. Conclusions . Our results indicated that hair Δ 199 Hg can be used to distinguish MeHg intake from fish versus rice. Results also suggested that lighter isotopes were preferentially accumulated in hair, potentially reflecting Hg binding to thiols ( i.e. , cysteine); however, more research is needed to elucidate this hypothesis. Broader impacts include 1) validation of a non-invasive biomarker to distinguish MeHg intake from rice versus fish, and 2) the potential to use Hg isotopes to investigate Hg binding in tissues.

Environmental Science: Processes & Impacts↗
USGS2001

Carbon dynamics within agricultural and native sites in the loess region of Western lowa

In order to quantify the historical changes in carbon storage that result from agricultural conversion, this study compared the carbon dynamics of two sites in the loess region of Iowa: a native prairie and a cropland. Field data were obtained to determine present-day carbon storage and its variability within a landscape (a stable ridgetop vs. eroding upper-midslope vs. depositional lower slope). Models were used to recreate the historical carbon budget of these sites and determine the cropland's potential to be a net CO2 source or sink, relative to the atmosphere. Regardless of slope position, the cropland site contains approximately half the amount of carbon as prairie. Variability in soil carbon storage within a site as a consequence of slope position is as large or larger (variations of 200-300%) than temporal variation (???200% at all slope positions). The most extreme difference in soil carbon storage between the cropland and prairie sites is found in the soil at the upper-midslope, which is the area of greatest erosion. The models estimate that 93-172% of the carbon in the original topsoil has been lost from the cropland's eroding midslope. Much of this carbon is derived from deeper soil horizons. Either a small sink or strong source of carbon to the atmosphere is created, depending on the fate of the eroded sediment and its associated carbon.

Global Change Biology↗
USGS2003

Temporal variation of energy reserves in mayfly nymphs ( Hexagenia spp.) from Lake St. Clair and western Erie

1. We analysed changes in energy reserves (lipid and glycogen) and length–weight relationships of burrowing mayflies ( Hexagenia spp.) in 1997–99 to compare an established population in Lake St Clair with a recovering population in western Lake Erie of the Laurentian Great Lakes. In addition, we measured changes in water temperature and potential food in both water columns and sediments. 2. Although overall mean values of lipid and glycogen levels of Hexagenia nymphs from Lake St Clair and western Lake Erie were not significantly different, there were differences in seasonal patterns between the two lakes. In Lake St Clair, levels were highest in early spring, declined throughout the year, and reached their lowest levels in fall during all 3 years of study. In contrast, levels in western Lake Erie were lower in spring, increased to a maximum in summer, then declined in fall. Seasonal patterns in length–weight relationships were similar to those for lipid and glycogen. 3. Total lipid as a percentage of dry weight did not increase with developmental stage of nymphs until just prior to metamorphosis and emergence from water. However, the major reserve lipid, triacylglycerols, increased systematically with development stage. In the final stage of development, triacylglycerols declined, probably as a result of energy consumption and its conversion to other biochemical components for metamorphosis and reproduction. 4. Indicators of potential food (algal fluorescence in the water column and chlorophyll a and chlorophyll a /phaeophytin ratio in sediments) suggest that Hexagenia in Lake St Clair have a food source that is benthic based, especially in early spring, whereas in western Lake Erie nymphs have a food source that is water column based and settles to the lake bottom during late spring and summer.

Freshwater Biology↗
USGS2002

Native American impacts on fire regimes of the California coastal ranges

Aim Native American burning impacts on California shrubland dominated landscapes are evaluated relative to the natural lightning fire potential for affecting landscape patterns. Location Focus was on the coastal ranges of central and southern California. Methods Potential patterns of Indian burning were evaluated based upon historical documents, ethnographic accounts, archaeological records and consideration of contemporary land management tactics. Patterns of vegetation distribution in this region were evaluated relative to environmental factors and the resilience of the dominant shrub vegetation to different fire frequencies. Results Lightning fire frequency in this region is one of the lowest in North America and the density of pre-Columbian populations was one of the highest. Shrublands dominate the landscape throughout most of the region. These woody communities have weak resilience to high fire frequency and are readily displaced by annual grasses and forbs under high fire frequency. Intact shrublands provided limited resources for native Americans and thus there was ample motivation for using fire to degrade this vegetation to an open mosaic of shrubland/grassland, not unlike the agropastoral modification of ecologically related shrublands by Holocene peoples in the Mediterranean Basin. Alien-dominated grasslands currently cover approximately one-quarter of the landscape and less than 1% of these grasslands have a significant native grass presence. Ecological studies in the Californian coastal ranges have failed to uncover any clear soil or climate factors explaining grassland and shrubland distribution patterns. Main conclusions Coastal ranges of California were regions of high Indian density and low frequency of lightning fires. The natural vegetation dominants on this landscape are shrubland vegetation that often form dense impenetrable stands with limited resources for Native Americans. Natural fire frequencies are not high enough to maintain these landscapes in habitable mixtures of shrublands and grasslands but such landscape mosaics are readily produced with additional human subsidy of ignitions. It is hypothesized that a substantial fraction of the landscape was type converted from shrubland to grassland and much of the landscape that underwent such type conversion has either been maintained by Euro-American land management practices or resisted recolonization of native shrublands. It appears that these patterns are disturbance dependent and result from anthropogenic alteration of landscapes initiated by Native Americans and sustained and expanded upon by Euro-American settlers.

Journal of Biogeography↗