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USGS1994

Overview of the National Water-Quality Assessment Program

The Nation's water resources are the basis for life and our economic vitality. These resources support a complex web of human activities and fishery and wildlife needs that depend upon clean water. Demands for good-quality water for drinking, recreation, farming, and industry are rising, and as a result, the American public is concerned about the condition and sustainability of our water resources. The American public is asking: Is it safe to swim in and drink water from our rivers or lakes? Can we eat the fish that come from them? Is our ground water polluted? Is water quality degrading with time, and if so, why? Has all the money we've spent to clean up our waters, done any good? The U.S. Geological Survey's National Water-Quality Assessment (NAWQA) Program was designed to provide information that will help answer these questions. NAWQA is designed to assess historical, current, and future water-quality conditions in representative river basins and aquifers nationwide. One of the primary objectives of the program is to describe relations between natural factors, human activities, and water-quality conditions and to define those factors that most affect water quality in different parts of the Nation. The linkage of water quality to environmental processes is of fundamental importance to water-resource managers, planners, and policy makers. It provides a strong and unbiased basis for better decisionmaking by those responsible for making decisions that affect our water resources, including the United States Congress, Federal, State, and local agencies, environmental groups, and industry. Information from the NAWQA Program also will be useful for guiding research, monitoring, and regulatory activities in cost effective ways.

Open-File Report↗

USGS2006

Land-Cover Trends of the Central Basin and Range Ecoregion

The U.S. Geological Survey (USGS) Land Cover Trends research project is focused on understanding the amounts, rates, trends, causes, and implications of contemporary land-use and land-cover (LU/LC) change in the United States. This project is supported by the USGS Geographic Analysis and Monitoring Program in collaboration with the U.S. Environmental Protection Agency (EPA) and the National Aeronautics and Space Administration (NASA). LU/LC change is a pervasive process that modifies landscape characteristics and affects a broad range of socioeconomic, biologic, and hydrologic systems. Understanding the impacts and feedbacks of LU/LC change on environmental systems requires an understanding of the rates, patterns, and driving forces of past, present, and future LU/LC change. The objectives of the Land Cover Trends project are to (1) determine and describe the amount, rates, and trends of contemporary LU/LC change by ecoregion for the period 1973-2000 for the conterminous United States, (2) document the causes, driving forces, and implications of change, and (3) synthesize individual ecoregion results into a national assessment of LU/LC change. The Land Cover Trends research team includes staff from the USGS National Center for Earth Resources Observation and Science (EROS), Rocky Mountain Geographic Science Center, Eastern Geographic Science Center, Mid-Continent Geographic Science Center, and the Western Geographic Science Center. Other partners include researchers at South Dakota State University, University of Southern Mississippi, and State University of New York College of Environmental Science and Forestry. This report presents an assessment of LU/LC change in the Central Basin and Range ecoregion for the period 1973-2000. The Central Basin and Range ecoregion is one of 84 Level-III ecoregions as defined by the Environmental Protection Agency. Ecoregions have served as a spatial framework for environmental resource management and to denote areas that contain a geographically distinct assemblage of biotic and abiotic phenomena including geology, physiography, vegetation, climate, soils, land use, wildlife, and hydrology. The established Land Cover Trends methodology generates estimates of LU/LC change using a probability sampling approach and change-detection analysis of thematic land-cover images derived from Landsat satellite imagery.

Scientific Investigations Report↗

USGS2008

Environmental contaminant hazards to wildlife at National Capital region and Mid-Atlantic National Park Service units

Pollutant data for air, water, soil and biota were compiled from databases and internet sources and by staff interviews at 23 National Park Service (NPS) units in 2005. A metric was derived describing the quality and quantity of data for each park, and in combination with known contaminant threats, the need for ecotoxicological study was identified and ranked. Over half of NP units were near Toxic Release Inventory sites discharging persistent pollutants, and fish consumption advisories were in effect at or near 22 of the units. Pesticide and herbicide use was found to be minimal, with the exception of those units with agricultural leases. Only 70 reports were found that describe terrestrial vertebrate environmental contaminant data at or near the units. Of the >75,000 compounds in commerce, empirical exposure data were limited to merely 58 halogenated compounds, insecticides, rodenticides, metals, and some contemporary compounds. Further ecotoxicological monitoring and research is warranted at several units including Shenandoah National Park, Richmond National Battlefield Park, Chesapeake & Ohio Canal National Historical Park, Valley Forge National Historical Park, Hopewell Furnace National Historic Site, Monocacy National Battlefield, and Harpers Ferry National Historical Park. The types of investigations vary according to the wildlife species present and potential contaminant threats, but should focus on contemporary use pesticides and herbicides, polychlorinated biphenyls, mercury, lead, and perhaps antibiotics, flame retardants, pharmaceuticals, and surfactants. Other management recommendations include inclusion of screening level contaminant risk assessments into the NPS Vital Signs Program, development of protocols for toxicological analysis of seemingly affected wildlife, alternative methods and compounds for pest management, and use of non-toxic fishing tackle by visitors.

Book chapter↗

USGS1999

Fraser River watershed, Colorado — Assessment of available water-quantity and water-quality data through water year 1997

The water-quantity and water-quality data for the Fraser River watershed through water year 1997 were compiled for ground-water and surface-water sites. In order to assess the water-quality data, the data were related to land use/land cover in the watershed. Data from 81 water-quantity and water-quality sites, which consisted of 9 ground-water sites and 72 surface-water sites, were available for analysis. However, the data were limited and frequently contained only one or two water-quality analyses per site. The Fraser River flows about 28 miles from its headwaters at the Continental Divide to the confluence with the Colorado River. Ground-water resources in the watershed are used for residential and municipal drinking-water supplies. Surface water is available for use, but water diversions in the upper parts of the watershed reduce the flow in the river. Land use/land cover in the watershed is predominantly forested land, but increasing urban development has the potential to affect the quantity and quality of the water resources. Analysis of the limited ground-water data in the watershed indicates that changes in the land use/land cover affect the shallow ground-water quality. Water-quality data from eight shallow monitoring wells in the alluvial aquifer show that iron and manganese concentrations exceeded the U.S. Environmental Protection Agency secondary maximum contaminant level. Radon concentrations from these monitoring wells exceeded the U.S. Environmental Protection Agency proposed maximum contaminant level. The proposed radon contaminant level is currently being revised. The presence of volatile organic compounds at two monitoring wells in the watershed indicates that land use affects the shallow ground water. In addition, bacteria detected in three samples are at concentrations that would be a concern for public health if the water was to be used as a drinking supply. Methylene blue active substances were detected in the ground water at some sites and are a possible indication of contamination from wastewater. Age of the alluvial ground water ranged from 10 to 30 years; therefore, results of land-management practices to improve water quality may not be apparent for many years. Surface-water-quality data for the Fraser River watershed are sparse. The surface-water-quality data show that elevated concentrations of selected constituents generally are related to specific land uses in the watershed. For one sample (about 2 percent; 1 of 53), dissolved manganese concentration exceeded the U.S. Environmental Protection Agency secondary maximum contaminant level. Two samples from two surface-water sites in the watershed exceeded the un-ionized ammonia chronic criterion. Spatial distribution of nutrient species (ammonia, nitrite, nitrate, and total phosphorus) shows that elevated concentrations occur primarily downstream from urban areas. Sites with five or more years of record were analyzed for temporal trends in concentration of nutrient species. Downward trends were identified for ammonia and nitrite for three surface-water sites. For nitrate, no trends were observed at two sites and a downward trend was observed at one site. Total phosphorus showed no trend for the site near the mouth of the Fraser River. Downward trends in the nutrient species may reflect changes in the wastewater-treatment facilities in the watershed. Bacteria sampling completed in the watershed indicates that more bacteria are present in the water near urban settings. The limited ground-water and surface-water data for the Fraser River watershed provide a general assessment of the quantity and quality of these resources. Concentrations of most water-quality constituents generally are less than ground- and surface-water-quality standards, but the presence of bacteria, some volatile organic compounds, methylene blue active substances, and increased nutrients in the water may indicate that land use is affecting the water quality.

Colorado↗

USGS2020

Microbial source tracking (MST) in Chattahoochee River National Recreation Area: Seasonal and precipitation trends in MST marker concentrations, and associations with E. coli levels, pathogenic marker presence, and land use

Escherichia coli levels in recreational waters are often used to predict when fecal-associated pathogen levels are a human health risk. The reach of the Chattahoochee River that flows through the Chattahoochee River National Recreation Area (CRNRA), located in the Atlanta-metropolitan area, is a popular recreation area that frequently exceeds the U.S. Environmental Protection Agency beach action value (BAV) for E. coli . A BacteriALERT program has been implemented to provide real-time E. coli estimates in the reach and notify the public of potentially harmful levels of fecal-associated pathogens as indicated by surrogate models based on real-time turbidity measurements from continuous water quality monitoring stations. However, E. coli does not provide information about the sources of fecal contamination and its accuracy as a human health indicator is questionable when sources of contamination are non-human. The objectives of our study were to investigate, within the Park and surrounding watersheds, seasonal and precipitation-related patterns in microbial source tracking marker concentrations of possible sources (human, dog, and ruminant), assess correlations between source contamination levels and culturable E. coli levels, determine which sources best explained model-based E. coli estimates above the BAV and detection of esp2 (a marker for the esp gene associated with pathogenic strains of Enterococcus faecium and Enterococcus faecalis) , and investigate associations between source contamination levels and land use features. Three BacteriALERT sites on the Chattahoochee River were sampled six times per season in the winter and summer from December 2015 through September 2017, and 11 additional stream sites (synoptic sites) from the CRNRA watershed were sampled once per season. Samples were screened with microbial source tracking (MST) quantitative PCR (qPCR) markers for humans (HF183 Taqman), dogs (DogBact), and ruminants (Rum2Bac), the esp2 qPCR marker, and culturable E. coli. At the BacteriALERT sites, HF183 Taqman concentrations were higher under wet conditions DogBact concentrations were greater in the winter and under wet conditions, and Rum2Bac concentrations were comparatively low throughout the study with no difference across seasons or precipitation conditions. Concentrations of HF183 Taqman, DogBact, and Rum2Bac were positively correlated with culturable E. coli concentrations; however, DogBact had the largest R 2 value among the three markers, and the forward stepwise regression indicated it was the best predictor of culturable E. coli concentrations at the BacteriALERT sites. Recursive partitioning indicated that BAV exceedances of model-based E. coli estimates were best explained by DogBact concentrations ≥3 gene copies per mL (CN/mL). Detections of esp2 at BacteriALERT sites were best explained by DogBact concentrations ≥11 CN/mL, while detections of esp2 at synoptic sites were best explained by HF183 Taqman ≥29 CN/mL. At the synoptic sites, HF183 Taqman levels were associated with wastewater treatment plant density. However, this relationship was driven primarily by a single site, suggesting possible conveyance issues in that catchment. esp2 detections at synoptic sites were positively associated with development within a 2-km radius and negatively associated with development within the catchment, suggesting multiple sources of esp2 in the watershed. DogBact and Rum2Bac were not associated with the land use features included in our analyses. Implications for Park management include: 1) fecal contamination levels were highest during wet conditions and in the off season when fewer visitors are expected to be participating in water-based recreation, 2) dogs are likely contributors to fecal contamination in the CRNRA and may be sources of pathogenic bacteria indicating further investigation of the origins of this contamination may be warranted as would be research to understand the human health risks from exposure to dog fecal contamination, and 3) high levels of the human marker at one site in the CRNRA watershed suggests more extensive monitoring in that catchment may locate the origin of human fecal contamination detected during this study.

Georgia↗

USGS2018

Greenhouse gas emissions from diverse Arctic Alaskan lakes are dominated by young carbon

Climate-sensitive Arctic lakes have been identified as conduits for ancient permafrost-carbon (C) emissions and as such accelerate warming. However, the environmental factors that control emission pathways and their sources are unclear; this complicates upscaling, forecasting and climate-impact-assessment efforts. Here we show that current whole-lake CH 4 and CO 2 emissions from widespread lakes in Arctic Alaska primarily originate from organic matter fixed within the past 3–4 millennia (modern to 3,300 ± 70 years before the present), and not from Pleistocene permafrost C. Furthermore, almost 100% of the annual diffusive C flux is emitted as CO 2 . Although the lakes mostly processed younger C (89 ± 3% of total C emissions), minor contributions from ancient C sources were two times greater in fine-textured versus coarse-textured Pleistocene sediments, which emphasizes the importance of the underlying geological substrate in current and future emissions. This spatially extensive survey considered the environmental and temporal variability necessary to monitor and forecast the fate of ancient permafrost C as Arctic warming progresses.

Alaska↗

USGS2019

Assessing the feasibility of satellite-based thresholds for hydrologically driven landsliding

Elevated soil moisture and heavy precipitation contribute to landslides worldwide. These environmental variables are now being resolved with satellites at spatiotemporal scales that could offer new perspectives on the development of landslide warning systems. However, the application of these data to hydro-meteorological thresholds (which account for antecedent soil moisture and rainfall) first need to be evaluated with respect to proven, direct measurement-based thresholds that use rain gauges and in situ soil moisture sensors. Here, we compare ground-based hydrologic data to overlapping satellite-based data before, during, and after a recent season of widespread shallow landsliding in the San Francisco Bay Area (California, USA). We then explore how the remotely sensed information could be used to empirically define hypothetical thresholds for shallow landsliding. We find that the ground-based thresholds developed with a single monitoring station show superior performance because the in situ soil saturation data better reflect the gravity-dominated subsurface flow conditions that are characteristic of hillslopes during the rainy season. Although the satellite-based thresholds can identify most of the landslide days, they include a greater number of false alarms due to overestimates of soil moisture between major storm events. To avoid the type of false alarms that are characteristic of our satellite-based thresholds, further post-processing of the near-surface hydrologic response data to better reflect gravity-dominated drainage should be integrated into satellite-based model outputs. Our results encourage further deployment of ground stations in landslide-prone terrain and cautious exploration of satellite-based hydro-meteorological thresholds where in situ networks are nonexistent.

California↗

USGS2000

Effects of lead in nestling black-crowned night-herons (Nycticorax nycticorax) experimentally dosed in the field

Lead is a known environmental toxicant, and poisoning resulting from the ingestion of lead shot has been well-documented in many species of waterfowl. However, much less is known regarding exposure and effects of free environmental lead in species of birds other than waterfowl. In an attempt to evaluate toxicity of lead to herons and to determine the usefulness of feathers as a non-invasive exposure-monitoring tool, black-crowned night-heron nestlings were dosed with lead to determine its distribution among tissues, and its effects on biochemical biomarkers, growth, and survival. Five-day-old heron nestlings (one per nest) at Chincoteague Bay, Virginia were given a single intra-peritoneal injection of dosing vehicle (control; N=7) or one of three lead solutions (as lead nitrate) (10, 50, or 250 mg/kg body weight of nestling; N=7 per dose) chosen to represent levels below, at, and above those found in moderately-polluted environments. All nestlings treated with lead exhibited dose-dependent inhibition of delta-aminolevulinic acid dehydratase (ALAD) activity compared to controls, and nestlings treated with the highest concentration showed a reduced carcass weight compared to controls. Of several measures of oxidative stress that were analyzed, significant differences were found between low- and high-dosed nestlings in hepatic total thiol and protein-bound sulfhydryl concentrations. No differences in survival were detected between dosed nestlings, controls, or uninjected siblings. Lead concentrations in several matrices, including feathers, are being determined to assess distribution among tissues and will also be examined for relationships with measures of effect.

Society of Environmental Toxicology and Chemistry,↗

USGS2024

Hypothetical CO2 leakage into, and hydrological plume management within, an underground source of drinking water at a proposed CO2 storage facility, Kemper County, Mississippi, USA

A large Geologic Carbon Sequestration (GCS) hub has been proposed in Kemper County, Mississippi. The target injection interval consists of numerous Cretaceous-aged deep saline aquifers overlain by a competent and extensive regional sealing layer. Above the seal, the deepest Underground Source of Drinking Water (USDW) at the site is the Eutaw aquifer of the Eutaw Group and McShan Formation, undifferentiated. To assess potential risks of leakage from the deep sequestration reservoir, a model of a portion of the Cretaceous Eutaw Group was constructed in this study. Simulations tested various permeabilities, hypothetical leakage rates, and plume mitigation strategies utilizing existing wells. Results suggest that, under the influence of regional groundwater flow fields, leaking CO 2 would effectively bypass the existing wells, and to influence this migration would require very large water extraction rates. Therefore, to ensure plume detection, monitoring for leakage at the injection wells themselves is very important.

Mississippi↗

USGS2016

Year-round monitoring of contaminants in Neal and Rogers Creeks, Hood River Basin, Oregon, 2011-12, and assessment of risks to salmonids

Pesticide presence in streams is a potential threat to Endangered Species Act listed salmonids in the Hood River basin, Oregon, a primarily forested and agricultural basin. Two types of passive samplers, polar organic chemical integrative samplers (POCIS) and semipermeable membrane devices (SPMDs), were simultaneously deployed at four sites in the basin during Mar. 2011–Mar. 2012 to measure the presence of pesticides, polybrominated diphenyl ethers (PBDEs), and polychlorinated biphenyls (PCBs). The year-round use of passive samplers is a novel approach and offers several new insights. Currently used pesticides and legacy contaminants, including many chlorinated pesticides and PBDEs, were present throughout the year in the basin’s streams. PCBs were not detected. Time-weighted average water concentrations for the 2-month deployment periods were estimated from concentrations of chemicals measured in the passive samplers. Currently used pesticide concentrations peaked during spring and were detected beyond their seasons of expected use. Summed concentrations of legacy contaminants in Neal Creek were highest during July–Sept., the period with the lowest streamflows. Endosulfan was the only pesticide detected in passive samplers at concentrations exceeding Oregon or U.S. Environmental Protection Agency water-quality thresholds. A Sensitive Pesticide Toxicity Index (SPTI) was used to estimate the relative acute potential toxicity among sample mixtures. The acute potential toxicity of the detected mixtures was likely greater for invertebrates than for fish and for all samples in Neal Creek compared to Rogers Creek, but the indices appear to be low overall (<0.1). Endosulfans and pyrethroid insecticides were the largest contributors to the SPTIs for both sites. SPTIs of some discrete (grab) samples from the basin that were used for comparison exceeded 0.1 when some insecticides (azinphos methyl, chlorpyrifos, malathion) were detected at concentrations near or exceeding acute water-quality thresholds. Early life stages and adults of several sensitive fish species, including salmonids, are present in surface waters of the basin throughout the year, including during periods of peak estimated potential toxicity. Based on these data, direct toxicity to salmonids from in-stream pesticide exposure is unlikely, but indirect impacts (reduced fitness due to cumulative exposures or negative impacts to invertebrate prey populations) are unknown.

Oregon↗

USGS1995

A preliminary assessment of the occurrence and possible sources of MTBE in ground water of the United States, 1993-94

The 1990 Clean Air Act Amendments require fuel oxygenates to be added to gasoline used in some metropolitan areas to reduce atmospheric concen- trations of carbon monoxide or ozone. Methyl tert-butyl ether (MTBE), is the most commonly used fuel oxygenate and is a relatively new gasoline additive. Nevertheless, out of 60 volatile organic chemicals analyzed, MTBE was the second most frequently detected chemical in samples of shallow ambient ground water from urban areas that were collected during 1993-94 as part of the U.S. Geological Survey's National Water-Quality Assessment program. Samples were collected from 5 drinking-water wells, 12 springs, and 193 monitoring wells in urban areas. No MTBE was detected in drinking-water wells. At a reporting level of 0.2 ug/L (micrograms per liter), MTBE was detected most frequently in shallow ground water from urban areas (27 percent of 210 wells and springs sampled in 8 areas) as compared to shallow ground water from agricultural areas (1.3 percent of 549 wells sampled in 21 areas) or deeper ground water from major aquifers (1 percent of 412 wells sampled in 9 areas). Only 3 percent of the shallow wells sampled in urban areas had concentrations of MTBE that exceed 20 ug/L, which is the estimated lower limit of the U.S. Environmental Protection Agency draft drinking-water health advisory. Because MTBE is persistent and mobile in ground water, it can move from shallow to deeper aquifers with time. In shallow urban ground water, MTBE generally was not found with benzene, toluene, ethylbenzene, or xylenes (BTEX) compounds which commonly are associated with gasoline spills. This disassociation causes uncertainty as to the source of MTBE. Possible sources of MTBE in ground water include point sources, such as leaking storage tanks, and nonpoint sources, such as recharge of precipitation and storm-water runoff.

Open-File Report↗

USGS2013

Coastal flood inundation monitoring with Satellite C-band and L-band Synthetic Aperture Radar data

Satellite Synthetic Aperture Radar (SAR) was evaluated as a method to operationally monitor the occurrence and distribution of storm- and tidal-related flooding of spatially extensive coastal marshes within the north-central Gulf of Mexico. Maps representing the occurrence of marsh surface inundation were created from available Advanced Land Observation Satellite (ALOS) Phased Array type L-Band SAR (PALSAR) (L-band) (21 scenes with HH polarizations in Wide Beam [100 m]) data and Environmental Satellite (ENVISAT) Advanced SAR (ASAR) (C-band) data (24 scenes with VV and HH polarizations in Wide Swath [150 m]) during 2006-2009 covering 500 km of the Louisiana coastal zone. Mapping was primarily based on a decrease in backscatter between reference and target scenes, and as an extension of previous studies, the flood inundation mapping performance was assessed by the degree of correspondence between inundation mapping and inland water levels. Both PALSAR- and ASAR-based mapping at times were based on suboptimal reference scenes; however, ASAR performance seemed more sensitive to reference-scene quality and other types of scene variability. Related to water depth, PALSAR and ASAR mapping accuracies tended to be lower when water depths were shallow and increased as water levels decreased below or increased above the ground surface, but this pattern was more pronounced with ASAR. Overall, PALSAR-based inundation accuracies averaged 84% (n = 160), while ASAR-based mapping accuracies averaged 62% (n = 245).

Louisiana↗

USGS2026

Mercury biomagnification across food webs with varying non-native fish presence: Implications for native fish conservation in the upper Colorado River Basin

Environmental contaminants and non-native species introductions negatively affect aquatic ecosystem conservation. Mercury (Hg) accumulates within food webs where it can biomagnify to toxic concentrations, which can be affected by altered trophic relationships from non-native species. This study examined Hg concentrations (n samples = 655) and stable carbon and nitrogen isotope ( n = 746) compositions in native ( n = 313) and non-native ( n = 342) species among four river subbasins (Gunnison, Lower Green, Colorado-Dolores, and White-Yampa), in the Upper Colorado River Basin (UCRB) during 2016 and 2017 to inform the potential combined effects of Hg exposure and non-native species interactions on native fishes of conservation concern. We assessed Hg biomagnification at the fish assemblage level, compared concentrations to risk thresholds for fish and human health, and evaluated niche overlap among trophic levels across subbasins. The generalist-invertivores feeding guild had the lowest Hg concentrations (0.001–0.191 μg g −1 wet weight), and no individuals exceeded the U.S. Environmental Protection Agency aquatic life criterion (0.225 μg g −1 ). Piscivores had the highest concentrations (0.008–1.840 μg g −1 ), and 74% of individuals exceeded the criterion. Biomagnification across trophic levels was observed throughout the UCRB, yet varied by subbasin, with higher magnification factors in the Lower Green and White-Yampa subbasins which also had the highest proportion of non-native species. Stable isotope compositions revealed niche overlap among native and non-native species. Additionally, trophic position varied within species among the subbasins. The proliferation of non-native species has likely reshaped food webs and may have intensified the potential threat Hg poses to native fish recovery and conservation. This study documented increased Hg concentrations relative to past assessments, suggesting that continued monitoring could assist in evaluating trends in Hg accumulation. Particularly studies that focus on sources entering the food web, vectors for accumulation, and competitive interactions among native and non-native species.

Colorado, Utah, Wyoming↗

USGS2013

Baseline assessment of physical characteristics, aquatic biota, and selected water-quality properties at the reach and mesohabitat scale for three stream reaches in the Big Cypress Basin, northeastern Texas, 2010-11

The U.S. Geological Survey (USGS), in cooperation with the Northeast Texas Municipal Water District and the Texas Commission on Environmental Quality, did a baseline assessment in 2010-11 of physical characteristics and selected aquatic biota (fish and mussels) collected at the mesohabitat scale for three stream reaches in the Big Cypress Basin in northeastern Texas for which environmental flows have been prescribed. Mesohabitats are visually distinct units of habitat within the stream with unique depth, velocity, slope, substrate, and cover. Mesohabitats in reaches of Big Cypress, Black Cypress, and Little Cypress Bayous were evaluated to gain an understanding of how fish communities and mussel populations varied by habitat. Selected water-quality properties were also measured in isolated pools in Black Cypress and Little Cypress. All of the data were collected in the context of the prescribed environmental flows. The information acquired during the study will support the long-term monitoring of biota in relation to the prescribed environmental flows.

Texas↗

USGS2009

Bioindicators of contaminant exposure and effect in aquatic and terrestrial monitoring

Bioindicators of contaminant exposure presently used in environmental monitoring arc discussed. Some have been extensively field-validated and arc already in routine application. Included are (1) inhibition of brain or blood cholinesterase by anticholinesterase pesticides, (2) induction of hepatic microsomal cytochromes P450 by chemicals such as PAHs and PCBs, (3) reproductive problems such as terata and eggshell thinning, and (4) aberrations of hemoglobin synthesis, including the effects of lead and of certain chlorinated hydrocarbons. Many studies on DNA damage and of histopathological effects, particularly in the form of tumors, have already been completed. There are presently numerous other opportunities for field validation. Bile metabolites of contaminants in fish reveal exposure to contaminants that might otherwise be difficult to detect or quantify. Bile analysis is beginning to be extended to species other than fishes. Assessment of oxidative damage and immune competence appear to be valuable biomarkers. needing only additional field validation for wider use. The use of metallothioneins as biomarkers depends on the development of convenient, inexpensive methodology that provides information not available from measurements of metal ions. The use of stress proteins as biomarkers depends on development of convenient, inexpensive methodology and field validation. Gene arrays and proteomics hold promise as bioindicators for contaminant exposure or effect, particularly because of the large amount of data that could be generated, but they still need extensive development and testing.

Book chapter↗

USGS2018

Mercury and lead exposure in avian scavengers from the Pacific Northwest suggest risks to California condors: Implications for reintroduction and recovery

Mercury (Hg) and lead (Pb) are widespread contaminants that pose risks to avian scavengers. In fact, Pb exposure is the primary factor limiting population recovery in the endangered California condor ( Gymnogyps californianus ) and Hg can impair avian reproduction at environmentally relevant exposures. The Pacific Northwest region of the US was historically part of the condor's native range, and efforts are underway to expand recovery into this area. To identify potential threats to reintroduced condors we assessed foraging habitats, Hg and Pb exposure, and physiological responses in two surrogate avian scavenger species (common ravens [ Corvus corax ] and turkey vultures [ Cathartes aura ] across the region between 2012 and 2016. Mercury exposure near the Pacific coast was 17–27-fold higher than in inland areas, and stable carbon and sulfur isotopes ratios indicated that coastal scavengers were highly reliant on marine prey. In contrast, Pb concentrations were uniformly elevated across the region, with 18% of the birds exposed to subclinical poisoning levels. Elevated Pb concentrations were associated with lower delta-aminolevulinic acid dehydratase ( δ -ALAD) activity, and in ravens there was an interactive effect between Hg and Pb on fecal corticosterone concentrations. This interaction indicated that the effects of Hg and Pb exposure on the stress axis are bidirectional, and depend on the magnitude of simultaneous exposure to the other contaminant. Our results suggest that condors released to the Pacific Northwest may be exposed to both elevated Hg and Pb, posing challenges to management of future condor populations in the Pacific Northwest. Developing a robust monitoring program for reintroduced condors and surrogate scavengers will help both better understand the drivers of exposure and predict the likelihood of impaired health. These findings provide a strong foundation for such an effort, providing resource managers with valuable information to help mitigate potential risks.

Environmental Pollution↗

USGS2003

Arsenic in midwestern glacial deposits — Occurrence and relation to selected hydrogeologic and geochemical factors

Ground-water-quality data collected as part of 12 U.S. Geological Survey National Water-Quality Assessment studies during 1996-2001 were analyzed to (1) document arsenic occurrence in four types of gla-cial deposits that occur in large areas of the Midwest, (2) identify hydrogeologic or geochemical factors asso-ciated with elevated arsenic concentrations, and (3) search for clues as to arsenic source(s) or mechanism(s) of mobilization that could be useful for designing future studies. Arsenic and other water-quality constituents were sampled in 342 monitor and domestic wells in parts of Illinois Indiana Ohio Michigan and Wisconsin. Arsenic was detected (at a concentration >1 ?g/L) in one-third of the samples. The maximum concentration was 84 ?g/L, and the median was less than 1 ?g/L. Eight percent of samples had arsenic concentrations that exceeded the U.S. Environmental Protection Agency Maximum Contaminant Level (MCL) of 10?g/L. Samples were from four aquifer types?confined valley fill, unconfined valley fill, outwash plain, and till with sand lenses. Highest arsenic concentrations were found in reducing waters from valley-fill depos-its. In confined valley fill, all waters were reducing and old (recharged before 1953), and almost half of sam-ples had arsenic concentrations greater than the MCL. In unconfined valley fill, redox conditions and ages were varied, and elevated arsenic concentrations were sporadic. In both types of valley fill, elevated arsenic concentrations are linked to the underlying bedrock on the basis of spatial relations and geochemical correla-tions. In shallow (<50 ft) till with sand lenses, arsenic was detected in oxic or mixed waters, but concentra-tions were rarely greater than the MCL. In shallow out-wash-plain deposits, arsenic concentrations greater than the MCL were detected in waters that were reduc-ing and young (recharged after 1953). Although arsenic concentrations were signifi-cantly higher in deep wells (>150 ft), all deep wells were from a distinctive aquifer type (confined valley fill). It is not known whether wells at similar depths in other aquifer types would produce waters with simi-larly high arsenic concentrations. Correlations of arsenic with fluoride, strontium, and barium suggest that arsenic might be related to epi-genetic (Mississippi Valley-type) sulfide deposits in Paleozoic bedrock. Arsenic is typically released from sulfides by oxidation, but in the current study, the highest arsenic concentrations in glacial deposits were detected in reducing waters. Therefore, a link between epigenetic sulfides and elevated arsenic concentrations in glacial deposits would probably require a multi-step process.

Illinois, Indiana, Ohio↗

USGS2012

Evaluation of stream flow effects on smolt survival in the Yakima River basin, Washington

Study Summary The influence of stream flow on salmon smolt emigration survival is a topic of widespread management interest. We collected smolt survival data to inform flow management decisions in the Yakima Basin. The Yakima River watershed drains the eastern slopes of the Cascade Mountain Range in central Washington State. The upper basin is comprised of two major tributaries–the Naches River and the upper Yakima River. Headwater storage reservoirs capture runoff during the winter and spring seasons to support downstream irrigation needs. During summer months, water is conveyed through the upper Yakima River and diverted at Roza Dam, a major irrigation diversion that supplies water to the Roza Irrigation District and to a hydroelectric plant located near Yakima, Washington. To assess smolt survival in the 18 km reach downstream of Roza Dam, a radio telemetry project will be carried out over a three-year timeframe. The first year of study was designed to provide baseline survival estimates at two distinct flow treatments during the spring migration period. The goal was to establish flow treatments that were as divergent as possible in order to maximize the observed effect of environmental conditions on smolt survival. In total, three experimental trials were carried out in 2012–one during low flow conditions (<600 cfs) and two during high flows (>3000 cfs). Data from the first year will be used to determine experimental design requirements to adequately address study objectives in years two and three. In the spring of 2012, fixed telemetry monitoring stations were established in strategic locations upstream and downstream of Roza Dam. Yearling Chinook salmon Oncorhynchus tshawytscha smolts originating from Cle Elum Hatchery were captured at the Roza Dam fish screen bypass facility, implanted with radio tags, and released upstream of Roza Dam. Each release group of 50 fish was paired with a high or low flow condition. Fish movements were tracked as tagged fish passed each monitoring station during their migration down the upper Yakima River, through Roza Dam, past the Naches River confluence, and eventually through Sunnyside and Prosser Dams. At the conclusion of field data collection, survival rates for each release group were calculated using Cormack-Jolly-Seber mark-recapture models. Yearling Chinook smolt survival and travel time estimates from 2012 suggest that migration rates and survival rates in the Roza Reach may be associated with stream flow, water temperature, release timing (i.e. migratory disposition), and fish size, but the extent to which each variable influenced survival is yet to be determined. The lowest survival rate (61%) and longest travel time (median 2.26 days) was observed in Release Group 1, which had the smallest size distribution and experienced the lowest flows, lowest temperatures, and earliest release date among the three groups. Release Groups 2 and 3 survived at 96% and 98% respectively and traveled through the Roza Reach in less than eight hours. The primary focus of years two and three of this study will be to collect data that minimizes the effect of confounding explanatory variables, so that flow effects on emigration survival can be quantified independent of these other influential factors.

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