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USGS2023

Structured decision making remains underused in ecological restoration despite opportunities

Ecological restoration is considered an essential activity as we attempt to repair anthropogenic degradation. Yet, resources are limited and it is important that efforts focus on activities that are effective and yield successful restoration. Structured decision making (SDM) is an organized framework that is designed to incorporate differing values across stakeholders and evaluate alternatives. The SDM framework typically consists of six steps: define the decision problem, define objectives and evaluation criteria, develop alternatives, estimate consequences, evaluate trade-offs, and decide, implement, and monitor. Here, we posit that SDM is well suited for ecological restoration, yet remains underused. Specifically, tools such as stakeholder surveys, conceptual modeling, and multi-criteria decision analysis are notably useful in ecological restoration and can be applied under the SDM framework to ensure robust and transparent decision making. We illustrate the application of SDM to ecological restoration with case studies that used SDM alongside ecosystem service assessments, for species-as-risk management, and to assess action desirability across large and diverse stakeholder groups. Finally, we demonstrate how SDM is equipped to handle many of the challenges associated with ecological restoration by identifying commonalities. We contend that increased use of SDM for ecological restoration by environmental managers has the potential to yield wise use of limited resources and more effective restoration outcomes.

Environment Systems and Decisions↗

USGS2005

Biology and invasive species in the western U.S

The diversity of environments that characterizes the West is responsible for the region's rich biological heritage. This ecological diversity also means that opportunities for invasive species are many, varied, and complex. Island ecosystems are notoriously vulnerable to invaders as demonstrated in Hawaii and West Coast offshore islands. Aquatic invaders impose high economic and environmental costs in systems as varied as San Francisco Bay and desert springs in the Great Basin. Although the West's arid and montane ecosystems may seem resistant to plant and animal invaders, we now know that ex-otic species have altered physical processes related to fire and hydrology in a manner favoring further expansion and persis-tence of invaders. Natural resource managers value analytical, mapping, and genetics tools developed by USGS scientists to monitor invasive species and help conserve biological systems. USGS biologists conduct research to assist land and water managers' efforts to control invasive species and restore natural systems. Throughout the West, the USGS carries out studies for early detection and rapid assessment of invaders. The following are some examples of how the USGS is making a difference in the western United States.

Fact Sheet↗

USGS2022

Use of riparian spiders as sentinels of persistent and bioavailable chemical contaminants in aquatic ecosystems: A review

Aquatic ecosystems around the world are contaminated with a wide range of anthropogenic chemicals, including metals and organic pollutants, that originate from point and nonpoint sources. Many of these chemical contaminants have complex environmental cycles, are persistent and bioavailable, can be incorporated into aquatic food webs, and pose a threat to the health of wildlife and humans. Identifying appropriate sentinels that reflect bioavailability is critical to assessing and managing aquatic ecosystems impacted by contaminants. The objective of the present study is to review research on riparian spiders as sentinels of persistent and bioavailable chemical contaminants in aquatic ecosystems. Our review of the literature on riparian spiders as sentinels suggests that significant progress has been made during the last two decades of research. We identified 55 published studies conducted around the world in which riparian spiders (primarily of the families Tetragnathidae, Araneidae, Lycosidae, and Pisauridae) were used as sentinels of chemical contamination of lotic, lentic, and estuarine systems. For several contaminants, such as polychlorinated biphenyls (PCBs), Hg, and Se, it is now clear that riparian spiders are appropriate sentinels. However, many contaminants and factors that could impact chemical concentrations in riparian spiders have not been well characterized. Further study of riparian spiders and their potential role as sentinels is critical because it would allow for development of national-scale programs that utilize riparian spiders as sentinels to monitor chemical contaminants in aquatic ecosystems. A riparian spider sentinel program in the United States would be complementary to existing national sentinel programs, including those for fish and immature dragonflies.

Environmental Toxicology and Chemistry↗

USGS2000

Time of travel of solutes in Buffalo Bayou and selected tributaries, Houston, Texas, August 1999

The U.S. Geological Survey (USGS), in cooperation with the U.S. Environmental Protection Agency, conducted a time-of-travel study in the Buffalo Bayou watershed during low flow in August 1999. The study was done as part of the U.S. Environmental Protection Agency Environmental Monitoring for Public Access and Community Tracking (EMPACT) program. The EMPACT program was designed for the U.S. Environmental Protection Agency to work with communities to “make timely, accurate, and understandable environmental information available to millions of people in the largest metropolitan areas across the country.” (U.S. Environmental Protection Agency, 2000). Buffalo Bayou, located in Houston, Texas, was chosen as a pilot project because it is a frequently used recreational water source, it has many water-treatment facilities located along its stream segments, and it has a history of water-quality problems (Houston-Galveston Area Council, 2000). One component of the pilot project is to develop a water-quality simulation model that can be used to assess the effects of noncompliance events on Buffalo Bayou. Because accurate estimates of time of travel during low flow are required to develop the model, the time of travel of solutes in Buffalo Bayou and selected tributaries was determined using dye tracing methods. The study was conducted during low flow in a 38.7-mile reach of Buffalo Bayou, a 9.6-mile reach of Whiteoak Bayou, a 5.9-mile reach of Mason Creek, and a 6.6-mile reach of Bear Creek. Efforts to determine the time of travel in a 7.5-mile reach of Horsepen Creek were unsuccessful. This report explains the approach used to conduct the study and presents the results of the study

Water-Resources Investigations Report↗

USGS2021

Hydrologic and ecological investigations in the School Branch watershed, Hendricks County, Indiana—Water years 2016–2018

School Branch in Hendricks County in central Indiana, is a small stream with a variety of agricultural and suburban land uses that drains into the Eagle Creek Reservoir, a major source of drinking water for Indianapolis, Indiana. The School Branch watershed has become the focus of a collaborative partnership of Federal, State, and local agencies; a university research center; and agricultural producers to understand the effects of land use and management practices on water quality and water quantity in the watershed. The U.S. Geological Survey, in cooperation with the Indiana Department of Environmental Management, contributed to the School Branch partnership with the operation of three streamgages (03353415 School Branch at Maloney Road near Brownsburg, Indiana; 03353420 School Branch at County Road 750 North at Brownsburg, Indiana; and 03353430 School Branch at Noble Drive at Brownsburg, Indiana) and the operation of a continuous water-quality gage (also known as a supergage) at County Road 750 North that measured dissolved oxygen, pH, temperature, specific conductance, turbidity, nitrate, and orthophosphate. Additional efforts included the use of passive samplers to identify wastewater indicators; assessment of fish and macroinvertebrate communities and stream habitat to identify ecological impairment; sampling for nutrients and sediment to estimate loads; and using major ions, stable isotopes and nested groundwater monitoring wells at County Road 750 North to determine hydrologic connectivity between the groundwater and surface water. The objectives of this study were to collect surface and groundwater data to analyze the hydrology and water quality within the watershed. Total nitrogen yields were highest at the upstream site, Maloney Road, and indicated a mixture of nitrogen sources in the watershed. Differences found in total nitrogen loading patterns throughout the watershed may be linked to differences in hydrology and land-use management from site to site. The groundwater and surface water were shown to be highly connected, and except for some low-flow periods, the water was flowing from groundwater to the stream for most of the study period. Fish and macroinvertebrate communities show improvement from upstream to downstream, with increases in diversity, richness, and species sensitive to poor water quality and habitat. These increases were most likely due to improved habitat quality at the downstream station.

Indiana↗

USGS1996

Water quality of surficial aquifers in the Georgia-Florida Coastal Plain

The National Water Quality Assessment Program of the U.S. Geological Survey established the Georgia-Florida Coastal Plain study unit in 1991. The ground-water study-unit survey was conducted in 1993 to provide a broad overview of water quality in surficial aquifers. Three land resource provinces were included in the Georgia-Florida Coastal Plain study-unit survey: the Central Florida Ridge, the Coastal Flatwoods, and the Southern Coastal Plain. The U.S. Geological Survey sampled 37 wells in surficial aquifers, 18 in the Coastal Flatwoods and 19 in the Southern Coastal Plain. The Florida Department of Environmental Protection sampled 27 wells tapping surficial aquifers in the Central Florida Ridge as part of the background ground-water quality monitoring network from 1985 through 1989. The data were used to characterize water quality in surficial aquifers of the Central Florida Ridge. Results of the study-unit survey indicated that dissolved solids concentrations in ground water were mostly less than 100 mg/L (milligrams per liter). Higher medians of pH, specific conductance, and concentrations of calcium, bicarbonate, and dissolved solids were measured in samples from the Central Florida Ridge compared to the Southern Coastal Plain and Coastal Flatwoods, probably because of a greater percentage of carbonate minerals in aquifer materials. The U.S. Environmental Protection Agency secondary maximum contaminant level for iron of 300 ug/L (micrograms per liter) in drinking water was exceeded in 15 of 45 samples. Concentrations of nitrate as nitrogen were less than 3.0 mg/L in most samples (74 percent), indicating little or no influence from human activity. Only five samples (9 percent) had concentrations above 10 mg/L, the U.S. Environmental Protection Agency maximum contaminant level for nitrate concentration in drinking water. Significantly lower median concentrations of nitrate were measured in samples from polyvinyl chloride monitoring wells with diameters less than 6 inches than in large diameter, uncased, or iron-cased wells. The median nitrate concentration was 0.05 mg/L in water from monitoring wells, 1.0 mg/L in samples from iron cased wells, and 2.0 mg/L in samples from uncased wells. Concentrations of volatile organic compounds were mostly less than the detection levels and exceeded 1 ug/L in only four samples. Compounds detected at concentrations greater than 1 ug/L were: tetrachloroethane (8.77 ug/L), toluene (23 ug/L) and chloromethane (21 ug/L). Atrazine, desethyl-atrazine, and metolachlor were the only pesticides detected; concentrations were less than 0.02 ug/L, except for metolachlor (2.5 ug/L). Detection of organic compounds in surficial aquifers may be associated with specific activities or sources near the well. Concentrations of radon exceeded the U.S. Environmental Protection Agency proposed maximum contaminant level of 300 picocuries per liter (pCi/L) in 33 samples from wells on the Coastal Flatwoods and the Southern Coastal Plain. Concentrations as high as 13,000 pCi/L were detected in northern Florida. Although uranium concentrations were less than 1 ug/L in all but one sample (1.3 ug/L) from the Southern Coastal Plain, elevated radon concentrations indicate that uranium is present in aquifer material. Uranium is most likely sorbed to iron oxides and clays in subsurface materials. Tritium concentrations indicated that ground water was recharged by precipitation during the past 40 years. Higher concentrations of tritium in ground water were found in the northern part of the study area and may be related to Savannah River Nuclear Facility.

Florida, Georgia↗

USGS2014

Spatially explicit habitat models for 28 fishes from the Upper Mississippi River System (AHAG 2.0)

Environmental management actions in the Upper Mississippi River System (UMRS) typically require pre-project assessments of predicted benefits under a range of project scenarios. The U.S. Army Corps of Engineers (USACE) now requires certified and peer-reviewed models to conduct these assessments. Previously, habitat benefits were estimated for fish communities in the UMRS using the Aquatic Habitat Appraisal Guide (AHAG v.1.0; AHAG from hereon). This spreadsheet-based model used a habitat suitability index (HSI) approach that drew heavily upon Habitat Evaluation Procedures (HEP; U.S. Fish and Wildlife Service, 1980) by the U.S. Fish and Wildlife Service (USFWS). The HSI approach requires developing species response curves for different environmental variables that seek to broadly represent habitat. The AHAG model uses species-specific response curves assembled from literature values, data from other ecosystems, or best professional judgment. A recent scientific review of the AHAG indicated that the model’s effectiveness is reduced by its dated approach to large river ecosystems, uncertainty regarding its data inputs and rationale for habitat-species response relationships, and lack of field validation (Abt Associates Inc., 2011). The reviewers made two major recommendations: (1) incorporate empirical data from the UMRS into defining the empirical response curves, and (2) conduct post-project biological evaluations to test pre-project benefits estimated by AHAG. Our objective was to address the first recommendation and generate updated response curves for AHAG using data from the Upper Mississippi River Restoration-Environmental Management Program (UMRR-EMP) Long Term Resource Monitoring Program (LTRMP) element. Fish community data have been collected by LTRMP (Gutreuter and others, 1995; Ratcliff and others, in press) for 20 years from 6 study reaches representing 1,930 kilometers of river and >140 species of fish. We modeled a subset of these data (28 different species; occurrences at sampling sites as observed in day electrofishing samples) using multiple logistic regression with presence/absence responses. Each species’ probability of occurrence, at each sample site, was modeled as a function of 17 environmental variables observed at each sample site by LTRMP standardized protocols. The modeling methods used (1) a forward-selection process to identify the most important predictors and their relative contributions to predictions; (2) partial methods on the predictor set to control variance inflation; and (3) diagnostics for LTRMP design elements that may influence model fits. Models were fit for 28 species, representing 3 habitat guilds (Lentic, Lotic, and Generalist). We intended to develop “systemic models” using data from all six LTRMP study reaches simultaneously; however, this proved impossible. Thus, we “regionalized” the models, creating two models for each species: “Upper Reach” models, using data from Pools 4, 8, and 13; and “Lower Reach” models, using data from Pool 26, the Open River Reach of the Mississippi River, and the La Grange reach of the Illinois River. A total of 56 models were attempted. For any given site-scale prediction, each model used data from the three LTRMP study reaches comprising the regional model to make predictions. For example, a site-scale prediction in Pool 8 was made using data from Pools 4, 8, and 13. This is the fundamental nature and trade-off of regionalizing these models for broad management application. Model fits were deemed “certifiably good” using the Hosmer and Lemeshow Goodness-of-Fit statistic (Hosmer and Lemeshow, 2000). This test post-partitions model predictions into 10 groups and conducts inferential tests on correspondences between observed and expected probability of occurrence across all partitions, under Chi-square distributional assumptions. This permits an inferential test of how well the models fit and a tool for reporting when they did not (and perhaps why). Our goal was to develop regionalized models, and to assess and describe circumstances when a good fit was not possible. Seven fish species composed the Lentic guild. Good fits were achieved for six Upper Reach models. In the Lower Reach, no model produced good fits for the Lentic guild. This was due to (1) lentic species being much less prominent in the Lower Reach study areas, and (2) those that do express greater prominence principally do so only in the La Grange reach of the Illinois River. Thus, developing Lower Reach models for Lentic species will require parsing La Grange from the other two Lower Reach study areas and fitting separate models. We did not do that as part of this study, but it could be done at a later time. Nine species comprised the Lotic guild. Good fits were achieved for seven Upper Reach models and six Lower Reach models. Four species had good fits for both regions (flathead catfish, blue sucker, sauger, and shorthead redhorse). Three species showed zoogeographic zonation, with a good model fit in one of the regions, but not in the region in which they were absent or rarely occurred (blue catfish, rock bass, and skipjack herring). Twelve species comprised the Generalist guild. Good fits were achieved for five Upper Reach models and eight Lower Reach models. Six species had good fits for both regions (brook silverside, emerald shiner, freshwater drum, logperch, longnose gar, and white bass). Two species showed zoogeographic zonation, with a good model fit in one of the regions, but not in the region in which they were absent or rarely occurred (red shiner and blackstripe topminnow). Poorly fit models were almost always due to the diagnostic variable “field station,” a surrogate for river mile. In these circumstances, the residuals for “field station” were non-randomly distributed and often strongly ordered. This indicates either fitting “pool scale” models for these species and regions, or explicitly model covariances between “field station” and the other predictors within the existing modeling framework. Further efforts on these models should seek to resolve these issues using one of these two approaches. In total, nine species, representing two of the three guilds (Lotic and Generalist), produced well-fit models for both regions. These nine species should comprise the basis for AHAG 2.0. Additional work, likely requiring downscaling of the regional models to pool-scale models, will be needed to incorporate additional species. Alternately, a regionalized AHAG could be comprised of those species, per region, that achieved well-fit models. The number of species and the composition of the regional species pools will differ among regions as a consequence. Each of these alternatives has both pros and cons, and managers are encouraged to consider them fully before further advancing this approach to modeling multi-species habitat suitability.

Upper Mississippi River System↗

USGS2015

Evaluation of methods for assessing physiological biomarkers of stress in freshwater mussels

Freshwater mussel populations are highly susceptible to environmental alterations because of their diminished numbers and primarily sessile behaviors; nonlethal biomonitoring programs are needed to evaluate the health of populations prior to mass mortality events. Our objectives were to determine ( i ) which biochemical parameters in freshwater mussel hemolymph could be consistently quantified, ( ii ) how hemolymph parameters and tissue glycogen respond to a thermal stress gradient (25, 30, and 35 °C), and ( iii ) the effects of tissue and hemolymph extraction on long-term growth and survival of smaller- and larger-bodied mussel species. Glucose exhibited elevated expression in both species with increasing water temperature. Two transaminase enzymes had elevated expression in the 30 °C treatment. The effects of hemolymph extraction and tissue biopsies were evaluated with a large-bodied species, Elliptio crassidens , and a smaller species, Villosa vibex . Individuals were monitored for 820 to 945 days after one of four treatments: hemolymph extraction, tissue biopsy, tissue and hemolymph extraction, and control. Hemolymph extraction and tissue biopsy adversely affected survival of V. vibex , suggesting that these extraction methods may add some risk of reduced survival to smaller-bodied species. Survival of E. crassidens was not impaired by any of the treatments, supporting the use of these techniques in nonlethal biomonitoring programs for larger-bodied mussel species.

Canadian Journal of Fisheries and Aquatic Sciences↗

USGS2010

Assessing the vulnerability of public-supply wells to contamination: Glacial aquifer system in Woodbury, Connecticut

This fact sheet highlights findings from the vulnerability study of a public-supply well in Woodbury, Connecticut. The well typically produces water at the rate of 72 gallons per minute from the glacial aquifer system in the Pomperaug River Basin. Water samples were collected at the public-supply well and at monitoring wells installed in or near the simulated zone of contribution to the supply well. Samples of untreated water from the public-supply wellhead contained several types of undesirable constituents, including 11 volatile organic compounds (VOCs), nitrate, pesticides, uranium, and radon. Most of these constituents were detected at concentrations below drinking-water standards, where such standards exist. Only concentrations of the VOC trichlorethylene exceeded the Maximum Contaminant Level (MCL) of 5 micrograms per liter (ug/L) established by U.S. Environmental Protection Agency for drinking water. Radon concentrations exceeded a proposed-but not finalized-MCL of 300 picocuries per liter (pCi/L). Overall, the study findings point to four main factors that affect the movement and fate of contaminants and the vulnerability of the public-supply well in Woodbury: (1) groundwater age (how long ago water entered, or recharged, the aquifer); (2) the percentage of recharge received through urban areas; (3) the percentage of recharge received through dry wells and their proximity to the public-supply well; and (4) natural geochemical processes occurring within the aquifer system; that is, processes that affect the amounts and distribution of chemical substances in aquifer sediments and groundwater. A computer-model simulation of groundwater flow to the public-supply well was used to estimate the age of water particles entering the well along the length of the well screen. About 90 percent of the simulated flow to the well consists of water that entered the aquifer 9 or fewer years ago. Such young water is vulnerable to contaminants resulting from human activities, as indicated by the solvents, fuel components, road salt, and septic-system leachate that were detected in the glacial aquifer system during the current study. Age-dating combined with chemical modeling suggests that less than 2 percent of water produced by the public-supply well is water from the deep bedrock that is "old" (water that recharged, or entered, the aquifer before 1952). Such a small percentage of old groundwater entering the public-supply well offers little potential for dilution of young waters containing contaminants from human activities. Shallow groundwater that originated as recharge through urban areas generally had higher median concentrations and more detections of volatile organic compounds (VOCs) than did groundwater from the deep glacial deposits or fractured bedrock that originated mainly as recharge through agricultural and undeveloped land. Shallow groundwater was also found to be affected by road salt and septic-system leachate. A chemical mixing model indicates that up to 15 percent of nitrate in water from the supply well is likely from septic-system leachate. The Connecticut Department of Public Health has identified several potential sources of contamination in the commercial area of Woodbury (several light industrial or commercial properties where hazardous materials and petroleum products are used and stored). To reduce stormwater runoff in the commercial area, water from the parking lots and pavement is channeled into dry wells-drains that shunt water directly into the aquifer system, bypassing the soil and unsaturated zones. A computer-model simulation of groundwater flow indicates that approximately 16 percent of the water produced by the public-supply well is derived from runoff captured by these drains. Traveltime for water from the dry wells to the public-supply well ranges from about 1.5 to less than 4 years. Dry wells have the potential to enhance contaminant movement to the supply well, suggesting that stormwater-control methods cannot be considered separately from groundwater quality—they are linked. Water-quality protection in this setting depends on the entire community. If residents and businesses take steps to reduce input of manmade contaminants to groundwater, a positive effect on quality of the supply-well water might begin to be seen in less than 10 years, owing to the short residence time of water in the aquifer.

Connecticut↗

USGS2021

Modeling watershed carbon dynamics as affected by land cover change and soil erosion

Process-based ecosystem carbon cycle models typically incorporate vegetation growth, vegetation mortality, and soil respiration as well as the biotic and environmental drivers that influence these variables. However, few spatially explicit process models can efficiently incorporate the influence of land cover change and carbon lateral movement at regional scales or high spatial resolution. This study uses the Land Use and Carbon Scenario Simulator (LUCAS) to demonstrate the development of a fast ecosystem model that not only considers the basic carbon cycle but also incorporates the impact of land cover change, soil erosion, and soil deposition. As input to the LUCAS modeling framework, we used the integrated biosphere simulator (IBIS) to simulate a non-spatial reference carbon cycling scenario without considering land cover change for the Nisqually River watershed in the northwestern United States. We then used the Land Change Monitoring, Assessment, and Projection (LCMAP) remotely sensed 30-m sequential land cover data to generate annual land change history for the Nisqually River area from 1985 to 2017 and used the Unit Stream Powered Erosion and Deposition model (USPED) to estimate annual soil carbon lateral movement. Finally, we combined the annual carbon outputs from IBIS, the land change history from LCMAP, and the soil erosion and deposition from USPED within the LUCAS simulation framework. Results showed that from 1985 to 2017, along with the dynamic land cover changes, total ecosystem biomass carbon increased from 11.4 to 18.6 TgC, mainly due to forest growth. Total ecosystem soil carbon declined from 31.7 to 29.7 TgC, but the overall loss in soil carbon was not uniform across land cover types. Forestland (forest sector) and grassland lost carbon, while wetland, developed land and agricultural land gained carbon. Forest, grassland, and developed land lost 0.0553 TgC during the study period (1.73 Gg of C per year; 1 Gg = 0.001 Tg) from erosion, while wetland gained 0.0071 TgC (0.22 Gg C per year) from deposition. Agricultural land was neutral in terms of soil erosion.

Washington↗

USGS2006

Annual dissolved nitrite plus nitrate and total phosphorous loads for the Susquehanna, St. Lawrence, Mississippi-Atchafalaya, and Columbia River basins, 1968-2004

Annual stream-water loads were calculated near the outlet of four of the larger river basins (Susquehanna, St. Lawrence, Mississippi-Atchafalaya, and Columbia) in the United States for dissolved nitrite plus nitrate (NO2 + NO3) and total phosphorus using LOADEST load estimation software. Loads were estimated for the period 1968-2004; although loads estimated for individual river basins and chemical constituent combinations typically were for shorter time periods due to limitations in data availability. Stream discharge and water-quality data for load estimates were obtained from the U.S. Geological Survey (USGS) with additional stream discharge data for the Mississippi-Atchafalaya River Basin from the U.S. Army Corps of Engineers. The loads were estimated to support national assessments of changes in stream nutrient loads that are periodically conducted by Federal agencies (for example, U.S. Environmental Protection Agency) and other water- and land-resource organizations. Data, methods, and results of load estimates are summarized herein; including World Wide Web links to electronic ASCII text files containing the raw data. The load estimates are compared to dissolved NO2 + NO3 loads for three of the large river basins from 1971 to 1998 that the USGS provided during 2001 to The H. John Heinz III Center for Science, Economics and the Environment (The Heinz Center) for a report The Heinz Center published during 2002. Differences in the load estimates are the result of using the most up-to-date monitoring data since the 2001 analysis, differences in how concentrations less than the reporting limit were handled by the load estimation models, and some errors and exclusions in the 2001 analysis datasets (which resulted in some inaccurate load estimates).

Open-File Report↗

USGS2015

Assessment of interim flow water-quality data of the San Joaquin River restoration program and implications for fishes, California, 2009-11

After more than 50 years of extensive water diversion for urban and agriculture use, a major settlement was reached among the U.S. Departments of the Interior and Commerce, the Natural Resources Defense Council, and the Friant Water Users Authority in an effort to restore the San Joaquin River. The settlement received Federal court approval in October 2006 and established the San Joaquin River Restoration Program, a multi-agency collaboration between State and Federal agencies to restore and maintain fish populations, including Chinook salmon, in the main stem of the river between Friant Dam and the confluence with the Merced River. This is to be done while avoiding or minimizing adverse water supply effects to all of the Friant Division contractors that could result from restoration flows required by the settlement. The settlement stipulates that water- and sediment-quality data be collected to help assess the restoration goals. This report summarizes and evaluates water-quality data collected in the main stem of the San Joaquin River between Friant Dam and the Merced River by the U.S. Bureau of Reclamation for the San Joaquin River Restoration Program during 2009-11. This summary and assessment consider sampling frequency for adequate characterization of variability, sampling locations for sufficient characterization of the San Joaquin River Restoration Program restoration reach, sampling methods for appropriate media (water and sediment), and constituent reporting limits. After reviewing the water- and sediment-quality results for the San Joaquin River Restoration Program, several suggestions were made to the Fisheries Management Work Group, a division of the San Joaquin River Restoration Program that focuses solely on the reintroduction strategies and health of salmon and other native fishes in the river. Water-quality results for lead and total organic carbon exceeded the Surface Water Ambient Monitoring Program Basin Plan Objectives for the San Joaquin Basin, and results for copper exceeded the U.S. Environmental Protection Agency Office of Pesticide Programs' aquatic-life chronic and acute benchmarks for invertebrates. One sediment sample contained detections of pyrethroid pesticides bifenthrin, lambda-cyhalothrin, and total permethrin at concentrations above published chronic toxicity thresholds.

California↗

USGS2008

Modeling to Predict Escherichia coli at Presque Isle Beach 2, City of Erie, Erie County, Pennsylvania

The Lake Erie beaches in Pennsylvania are a valuable recreational resource for Erie County. Concentrations of Escherichia coli (E. coli) at monitored beaches in Presque Isle State Park in Erie, Pa., occasionally exceed the single-sample bathing-water standard of 235 colonies per 100 milliliters resulting in potentially unsafe swimming conditions and prompting beach managers to post public advisories or to close beaches to recreation. To supplement the current method for assessing recreational water quality (E. coli concentrations from the previous day), a predictive regression model for E. coli concentrations at Presque Isle Beach 2 was developed from data collected during the 2004 and 2005 recreational seasons. Model output included predicted E. coli concentrations and exceedance probabilities--the probability that E. coli concentrations would exceed the standard. For this study, E. coli concentrations and other water-quality and environmental data were collected during the 2006 recreational season at Presque Isle Beach 2. The data from 2006, an independent year, were used to test (validate) the 2004-2005 predictive regression model and compare the model performance to the current method. Using 2006 data, the 2004-2005 model yielded more correct responses and better predicted exceedances of the standard than the use of E. coli concentrations from the previous day. The differences were not pronounced, however, and more data are needed. For example, the model correctly predicted exceedances of the standard 11 percent of the time (1 out of 9 exceedances that occurred in 2006) whereas using the E. coli concentrations from the previous day did not result in any correctly predicted exceedances. After validation, new models were developed by adding the 2006 data to the 2004-2005 dataset and by analyzing the data in 2- and 3-year combinations. Results showed that excluding the 2004 data (using 2005 and 2006 data only) yielded the best model. Explanatory variables in the 2005-2006 model were log10 turbidity, bird count, and wave height. The 2005-2006 model correctly predicted when the standard would not be exceeded (specificity) with a response of 95.2 percent (178 out of 187 nonexceedances) and correctly predicted when the standard would be exceeded (sensitivity) with a response of 64.3 percent (9 out of 14 exceedances). In all cases, the results from predictive modeling produced higher percentages of correct predictions than using E. coli concentrations from the previous day. Additional data collected each year can be used to test and possibly improve the model. The results of this study will aid beach managers in more rapidly determining when waters are not safe for recreational use and, subsequently, when to close a beach or post an advisory.

Scientific Investigations Report↗

USGS2000

Design of a shallow ground-water network to monitor agricultural chemicals, Lake Wales Ridge, central Florida

Extensive agricultural land use and dynamic hydraulic connections between the land surface and ground-water resources render many of Florida's aquifers vulnerable to chemical contamination. In these areas, there is a need to monitor shallow ground water for agricultural chemicals to evaluate potential migration of the chemicals to the subsurface and to deeper aquifers, and to assess the effects of agricultural practices on ground-water quality. Historically, efforts to monitor water-table aquifers have been minimal compared with monitoring deeper aquifers used for municipal drinking-water supply. The Florida Department of Agriculture and Consumer Services has proposed the establishment of long-term, water-quality networks to monitor shallow ground water in agricultural areas of Florida. These networks will bridge the current information gap between local-scale short-duration field studies, which are required for pesticide licensing, and statewide monitoring of deeper ground-water resources. Laboratory (experimental) and short-term field evaluations of the transport of agricultural chemicals to the subsurface contain some degree of uncertainty due to widespread variations in environmental conditions. The proposed regional-scale shallow ground-water networks will serve as "early warning" networks to avoid contamination of ground-water resources. The objectives of these shallow ground-water networks are to provide information for early detection of pesticides and nitrate in the subsurface, and for evaluating temporal trends in concentrations in relation to changes in land use and agricultural practices. Information on trends is important to the U.S. Environmental Protection Agency, State agencies, and agricultural managers, and is an integral part of Florida's Pesticide Management Plan, which evaluates the effectiveness of implementing "best management practices" to minimize environmental impacts. Lake Wales Ridge in Polk and Highlands Counties has been identified by the Florida Department of Agriculture and Consumer Services as a pilot study area for implementing a regional shallow ground-water network. Information gained from designing the Lake Wales Ridge Network will be used to develop plans as similar networks are considered for other areas of Florida. Lake Wales Ridge is heavily utilized for citrus production, but the well-drained, clean sands underlying the region, coupled with a hydraulic connection with deeper karst formations, render the area extremely vulnerable to the transport and migration of agricultural chemicals within the subsurface. The network design for Lake Wales Ridge was developed on the basis of the objectives of monitoring, factors affecting aquifer vulnerability, probability (statistical) sampling theory, and specifications regarding well construction, sampling, and laboratory analysis. The network will provide estimates of regional pesticide and nitrate concentrations in targeted ground water, monitor for trends over time, and will provide baseline, regional-scale information. The areas targeted for sampling were citrus groves located on soils classified as vulnerable to leaching of agricultural chemicals, and ground water in close proximity to the water table. The duration of monitoring is planned to be long term. Chemicals targeted for monitoring include selected nutrients, trace elements, and pesticides used for citrus management. Standardization of field sampling and laboratory methods, and construction of a computerized data-base repository will be important for long-term utility of the data. The proposed network design consists of existing and newly drilled wells. Existing wells were evaluated as candidates for the network based on location and well-construction specifications for water-quality monitoring. Using probability selection techniques, new well locations were selected in areas that lacked adequate existing wells. Implementation of the network will occur in phases. Quarterly sampling of 13 Phase I wells commenced in April 1999. An additional 11 Phase II wells were added to the network in April 2000. Proposed locations have been identified for 8 Phase III wells. Future topics for study include a regional water-quality analysis, a network design evaluation, and consideration of local-scale studies needed to support regional monitoring efforts. An analysis of historical water-quality data for Lake Wales Ridge, including Phase I wells, is needed for the purpose of examining trends, providing a preliminary description of spatial and short-term variability in water quality, and evaluating the proposed network design for cost effectively meeting program objectives. Local-scale, process-oriented studies are needed to provide important information for evaluating regional water-quality data. Coordination between individuals conducting such local-scale studies and those interpreting regional sampling results will be considered as a component of the network design, and will require coordination between multiple agencies.

Florida↗

USGS2023

Interaction of a legacy groundwater contaminant plume with the Little Wind River from 2015 through 2017, Riverton Processing site, Wyoming

The Riverton Processing site was a uranium mill 4 kilometers southwest of Riverton, Wyoming, that prepared uranium ore for nuclear reactors and weapons from 1958 to 1963. The U.S. Department of Energy completed surface remediation of the uranium tailings in 1989; however, groundwater below and downgradient from the tailings site and nearby Little Wind River was not remediated. Beginning in 2010, a series of floods along the Little Wind River began to mobilize contaminants in the unsaturated zone, resulting in substantial increases of uranium and other contaminants of concern in monitoring wells completed inside the contaminant plume. In 2011, the U.S. Department of Energy started a series of university and Government agency retrospective and field investigations to understand the processes controlling contaminant increases in the groundwater plume. The goals of the field investigations described in this report were to (1) identify and quantify the contaminant flux and potential associated biological effects from groundwater associated with the legacy plume as it enters a perennial stream reach, and (2) assess chemical exposure and potential effects to biological receptors from the interaction of the contaminant plume and the river. Field investigations along the Little Wind River were completed by the U.S. Geological Survey during 2015–17 in cooperation with the U.S. Department of Energy Office of Legacy Management to characterize: (1) seepage areas and seepage rates; (2) pore-water and bed sediment chemistry and hyporheic exchange and reactive loss; and (3) exposure pathways and biological receptors. All data collected during the study are contained in two U.S. Geological Survey data releases, available at https://doi.org/10.5066/F7BR8QX4 and https://doi.org/10.5066/P9J9VJBR . A variety of tools and methods were used during the field characterizations. Streambed temperature mapping, electrical resistivity tomography, electromagnetic induction, fiber-optic distributed temperature sensing, tube seepage meters, vertical thermal sensor arrays, and an environmental tracer (radon) were used to identify areas of groundwater seepage and associated seepage rates along specific sections of the study reach of the river. Drive points, minipiezometers, diffusive equilibrium in thin-film/diffusive gradients in thin-film probes, bed-sediment samples, and equal discharge increment sampling methods were used to characterize pore-water chemistry, estimate hyporheic exchange and reactive loss of selected chemical constituents, and quantify contaminant loadings entering the study reach. Sampling and analysis of surface sediments, filamentous algae, periphytic algae, and macroinvertebrates were used to characterize biological exposure pathways, metal uptake, and receptors. Areas of focused groundwater discharge identified by the fiber-optic distributed temperature sensing surveys corresponded closely with areas of elevated electrical conductivity identified by the electromagnetic induction survey results in the top 5 meters of sediment. During three monitoring periods in 2016, the mean vertical seepage rate measured with tube seepage meters was 0.45 meter per day, ranging from −0.02 to 1.55 meters per day. Five of the 11 locations where vertical thermal profile data were collected along the study reach during August 2017 indicated mean upwelling values ranging from 0.11 to 0.23 meter per day. Radon data collected from the Little Wind River during June, July, and August 2016 indicated a consistent inflow of groundwater to the central part of the study reach, in the area congruous with the center of the previously mapped groundwater plume discharge zone. During August 2017, the greatest attenuation of uranium from reactive loss in pore-water samples was observed at three locations along the study reach, at depths between 6 and 15 centimeters, and similar trends in molybdenum attenuation were also observed. Bed-sediment concentration profiles collected during 2017 also indicated attenuation of uranium and molybdenum from groundwater during hyporheic mixing of surface water with the legacy plume during groundwater upwelling into the river. Streamflow measurements combined with equal discharge increment water sampling along the study reach indicated an increase in dissolved uranium concentrations in the downstream direction during 2016 and 2017. Net uranium load entering the Little Wind River study reach was about 290 and 435 grams per day during 2016 and 2017, respectively. Biological samples indicated that low levels of uranium and molybdenum exposure were confined to the benthos in the Little Wind River within and immediately downstream from the perimeter of the groundwater plume. Concentrations of molybdenum and uranium in filamentous algae were consistently low at all sites in the study reach with no indication of increased exposure of dissolved bioavailable molybdenum or uranium at sites next to or downstream from the groundwater plume. Comparison of the August 2017 results from electromagnetic induction, tube seepage meters, vertical thermal profiling, and pore-water chemistry surveys were in general agreement in identifying areas with upwelling groundwater conditions along the study reach. However, the electroconductivity values measured with electromagnetic induction in the top 100 centimeters of sediment did not agree with sodium concentrations measured in pore-water samples collected at similar streambed depths. Differences and similarities between multiple methods can result in additional insights into hydrologic and biogeochemical processes that may be occurring along a reach of a river system interacting with shallow groundwater inputs. It may be advantageous to apply a variety of geophysical, geochemical, hydrologic, and biological tools at other Uranium Mill Tailings Remedial Action ( https://www.energy.gov/sites/prod/files/2014/10/f19/UMTRCA.pdf ) sites during the investigation of legacy contaminant plume interactions with surface-water systems.

Wyoming↗

USGS2007

Assessment of Historical Water-Quality Data for National Park Units in the Rocky Mountain Network, Colorado and Montana, through 2004

This report summarizes historical water-quality data for six National Park units that compose the Rocky Mountain Network. The park units in Colorado are Florissant Fossil Beds National Monument, Great Sand Dunes National Park and Preserve, and Rocky Mountain National Park; and in Montana, they are Glacier National Park, Grant-Kohrs Ranch National Historic Site, and Little Bighorn Battlefield National Monument. This study was conducted in cooperation with the Inventory and Monitoring Program of the National Park Service to aid in the design of an effective and efficient water-quality monitoring plan for each park. Data were retrieved from a number of sources for the period of record through 2004 and compiled into a relational database. Descriptions of the environmental setting of each park and an overview of the park's water resources are presented. Statistical summaries of water-quality constituents are presented and compared to aquatic-life and drinking-water standards. Spatial, seasonal, and temporal patterns in constituent concentrations also are described and suggestions for future water-quality monitoring are provided.

Scientific Investigations Report↗

USGS2003

Groundwater quality surrounding Lake Texoma during short-term drought conditions

Water quality data from 55 monitoring wells during drought conditions surrounding Lake Texoma, located on the border of Oklahoma and Texas, was compared to assess the influence of drought on groundwater quality. During the drought month of October, water table levels were three feet (0.9 m) lower compared with several months earlier under predrought climate conditions. Detection frequencies of nitrate (> 0.1 mg/l), orthophosphates (> 0.1 mg/l), chlorides (> MCL), and sulfates (> MCL) all increased during drought. Orthophosphate level was higher during drought. Largest increases in concentration were nitrate under both agriculture lands and in septic tank areas. An increase in ammonium-nitrogen was only detected in the septic tank area. The study showed that stressors such as nitrate and total salts could potentially become a health or environmental problem during drought.

Environmental Pollution↗

USGS2009

Review of FEWS NET biophysical monitoring requirements

The Famine Early Warning System Network (FEWS NET) provides monitoring and early warning support to decision makers responsible for responding to famine and food insecurity. FEWS NET transforms satellite remote sensing data into rainfall and vegetation information that can be used by these decision makers. The National Aeronautics and Space Administration has recently funded activities to enhance remote sensing inputs to FEWS NET. To elicit Earth observation requirements, a professional review questionnaire was disseminated to FEWS NET expert end-users; it focused upon operational requirements to determine additional useful remote sensing data and, subsequently, to assess whether such data would be beneficial as FEWS NET biophysical supplementary inputs. The review was completed by over 40 experts from around the world. Reviewers were asked to evaluate the relative importance of environmental variables and spatio-temporal requirements for Earth science data products, in particular for rainfall and vegetation products. The results showed that spatio-temporal resolution requirements are complex and need to vary according to place, time, and hazard; that high resolution remote sensing products continue to be in demand; and that rainfall and vegetation products are valued as data that provide actionable food security information.

Environmental Research Letters↗