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USGS2014

Ecological change on California's Channel Islands from the Pleistocene to the Anthropocene

Historical ecology is becoming an important focus in conservation biology and offers a promising tool to help guide ecosystem management. Here, we integrate data from multiple disciplines to illuminate the past, present, and future of biodiversity on California's Channel Islands, an archipelago that has undergone a wide range of land-use and ecological changes. Our analysis spans approximately 20,000 years, from before human occupation and through Native American hunter–gatherers, commercial ranchers and fishers, the US military, and other land managers. We demonstrate how long-term, interdisciplinary research provides insight into conservation decisions, such as setting ecosystem restoration goals, preserving rare and endemic taxa, and reducing the impacts of climate change on natural and cultural resources. We illustrate the importance of historical perspectives for understanding modern patterns and ecological change and present an approach that can be applied generally in conservation management planning.

California↗

USGS2020

Supporting the development and use of native plant materials for restoration on the Colorado Plateau (Fiscal Year 19 Report)

A primary focus of the Bureau of Land Management’s (BLM’s) Colorado Plateau Native Plant Program (CPNPP) is to identify and develop appropriate native plant materials (NPMs) for current and future restoration projects. Multiple efforts have characterized the myriad challenges inherent in providing appropriate seed resources to enable effective, widespread restoration and have identified a broad suite of research activities to provide the information necessary to overcome those challenges (e.g., Plant Conservation Alliance 2015; Breed et al. 2018; Winkler et al. 2018). Many of the most complex information needs relate to identifying the appropriate sources of plant species that can successfully establish in dryland environments, like the Colorado Plateau, where low and highly variable precipitation is standard. Providing this information requires synergistic research efforts in which results from earlier investigations inform the design of subsequent investigations. The U.S. Geological Survey Southwest Biological Science Center’s (SBSC’s) research activities in FY19 followed an FY19 Statement of Work to support a research framework that is continually adapting based on the needs of the restoration community and results from previous investigations; the long-term research framework is outlined in the 2019-2023 5-Year Research Strategy (hereafter referred to as the 5-year plan). This research framework provides support for the National Seed Strategy for Rehabilitation and Restoration (Plant Conservation Alliance, 2015), Department of Interior Secretarial Order #3347 (Conservation Stewardship and Outdoor Recreation), and Department of Interior Leadership Priority #1 (Create a conservation stewardship legacy second only to Teddy Roosevelt). Research activities in FY19 centered on landscape genetics, collecting seeds in preparation for experimental common gardens, and planning and trials in support of experimental drought gardens. These activities were supported by three biological technicians, one of which was jointly funded by the Ecological Society of America for six pay periods. Most of the field-related activities, including plant trait measurement, seed/tissue collecting, and GRID (Germination for Restoration Information and Decision-making) experimental treatments at the Canyonlands Research Center near Moab, UT were assigned to these technicians. Contrary to the drought conditions the pervaded the Colorado Plateau in FY18, plentiful spring precipitation resulted in easily-collected plant tissue and seed collections. However, the cool and wet spring delayed the phenology of early blooming species, which caused difficulties for timing seed collecting. Furthermore, seed collecting for late blooming species was difficult because of lower than average monsoon precipitation. While Dr. Rob Massatti was the only scientist supported by the SBSC-CPNPP agreement in FY19, other scientists, including Drs. John Bradford, Seth Munson, Mike Duniway, Sasha Reed, and Daniel Winkler, spent a considerable amount of time providing expert guidance and support for individual projects. Work activities performed in support of each 5-year plan goal are discussed in turn.

Arizona, Colorado, New Mexico, Utah↗

USGS2020

Harvester ant seed removal in an invaded sagebrush ecosystem: Implications for restoration

A better understanding of seed movement in plant community dynamics is needed, especially in light of disturbance‐driven changes and investments into restoring degraded plant communities. A primary agent of change within the sagebrush‐steppe is wildfire and invasion by non‐native forbs and grasses, primarily cheatgrass ( Bromus tectorum ). Our objectives were to quantify seed removal and evaluate ecological factors influencing seed removal within degraded sagebrush‐steppe by granivorous Owyhee harvester ants ( Pogonomyrmex salinus Olsen). In 2014, we sampled 76 harvester ant nests across 11 plots spanning a gradient of cheatgrass invasion (40%–91% cover) in southwestern Idaho, United States. We presented seeds from four plant species commonly used in postfire restoration at 1.5 and 3.0 m from each nest to quantify seed removal. We evaluated seed selection for presented species, monthly removal, and whether biotic and abiotic factors (e.g., distance to nearest nest, temperature) influenced seed removal. Our top model indicated seed removal was positively correlated with nest height, an indicator of colony size. Distance to seeds and cheatgrass canopy cover reduced seed removal, likely due to increased search and handling time. Harvester ants were selective, removing Indian ricegrass ( Achnatherum hymenoides ) more than any other species presented. We suspect this was due to ease of seed handling and low weight variability. Nest density influenced monthly seed removal, as we estimated monthly removal of 1,890 seeds for 0.25 ha plots with 1 nest and 29,850 seeds for plots with 15 nests. Applying monthly seed removal to historical restoration treatments across the western United States showed harvester ants can greatly reduce seed availability at degraded sagebrush sites; for instance, fourwing saltbush ( Atriplex canescens ) seeds could be removed in <2 months. Collectively, these results shed light on seed removal by harvester ants and emphasize their potential influence on postfire restoration within invaded sagebrush communities.

Idaho↗

USGS2007

Using simulated historical time series to prioritize fuel treatments on landscapes across the United States: The LANDFIRE prototype project

Canopy and surface fuels in many fire-prone forests of the United States have increased over the last 70 years as a result of modern fire exclusion policies, grazing, and other land management activities. The Healthy Forest Restoration Act and National Fire Plan establish a national commitment to reduce fire hazard and restore fire-adapted ecosystems across the USA. The primary index used to prioritize treatment areas across the nation is Fire Regime Condition Class (FRCC) computed as departures of current conditions from the historical fire and landscape conditions. This paper describes a process that uses an extensive set of ecological models to map FRCC from a departure statistic computed from simulated time series of historical landscape composition. This mapping process uses a data-driven, biophysical approach where georeferenced field data, biogeochemical simulation models, and spatial data libraries are integrated using spatial statistical modeling to map environmental gradients that are then used to predict vegetation and fuels characteristics over space. These characteristics are then fed into a landscape fire and succession simulation model to simulate a time series of historical landscape compositions that are then compared to the composition of current landscapes to compute departure, and the FRCC values. Intermediate products from this process are then used to create ancillary vegetation, fuels, and fire regime layers that are useful in the eventual planning and implementation of fuel and restoration treatments at local scales. The complex integration of varied ecological models at different scales is described and problems encountered during the implementation of this process in the LANDFIRE prototype project are addressed.

Ecological Modelling↗

USGS2023

Estimating the impact of climate and vegetation changes on runoff risk across the Hawaiian landscape

In Hawai’i, ecosystem conservation practitioners are increasingly considering the potential ecohydrological benefits from applied conservation action to mitigate the degrading impacts of runoff on native and restored ecosystems. One determinant of runoff is excess rainfall events where rainfall rates exceed the infiltration capacity of soils. To help understand runoff risks, we calculated the probability of excess rainfall events across the Hawaiian landscape by comparing the probability distributions of projected rainfall frequency and land-cover-specific infiltration capacity. We characterized soil infiltration capacity based on different land cover types (bare soil, grasses, and woody vegetation) and compared them to the frequency of large rainfall events under current and future climate scenarios. We then mapped the potential risk of excess rainfall across the main Hawaiian Islands. Our results show that land cover type has a very large effect on runoff risk as excess rainfall conditions are 234% more likely in bare soil and 75% more likely in grasslands compared to woody forests and shrublands. In contrast, projected shifts in rainfall intensity by end-of-century show little impact on these probabilities and thus, the risk of runoff. This indicates that the probability of excess rainfall is primarily driven by differences in land cover and not by current or potential shifts in rainfall patterns across the Hawaiian landscape. The ability to estimate the risk of potentially ecologically and economically costly runoff based on changes of land cover is useful for managers focused on invasive species control and restoration planning, especially for native and endemic ecosystems unique to the State of Hawai’i.

Hawaii↗

USGS2011

Population assessment and potential functional roles of native mussels in the Upper Mississippi River

1. Despite a heightened global concern for native mussels, fundamental research on mussel ecology in large rivers is lacking. These gaps in knowledge about where mussels occur, and why, are limiting habitat restoration activities. 2. Large-scale systematic surveys for native mussels in three reaches of the Upper Mississippi River documented mussel communities composed of 16–23 species and ranging from 2.9–4.5 live mussels m -2 that were actively recruiting new cohorts into their populations (87–100% of the species were found as juveniles 5 years old). Estimates of mean tissue biomass and production in these reaches ranged from 2.1–3.1 g C m -2 and 0.4–0.6 g C m -2 year -1 , respectively. 3. Mussels filtered a significant amount of water (range, 0.05–0.07 m 3 m -2 d -1 ) over a 480 km reach of the Upper Mississippi River — amounting to a filtration rate of 53.1 million m 3 day -1 . The filtration rate of mussels as a percentage of river discharge ranged from 0.5–1.4% at high flows (5% exceedance), from 1.5–4.4% at moderate flows (50% exceedance) and from 4.4–12.2% during low flows (95% exceedance). 4. Collectively, these data suggest that native mussels play an integral role in this ecosystem by sequestering suspended materials that can be used by other benthic organisms.

Illinois, Iowa, Minnesota, Missouri, Wisconsin↗

USGS2023

Conservation at the nexus of niches: Multidimensional niche modeling to improve management of Prairie Chub

Objective A central challenge in applied ecology is understanding how organisms are spatially and temporally distributed and how management might be tailored to maintain or restore species distributions. The niche concept is central to understanding species distributions, but the diversity of niche definitions requires that multiple dimensions be considered. For example, the Grinnellian niche concept focuses on environmental conditions that allow species to persist, the Eltonian niche concept stresses the influence of biotic interactions, and the fundamental niche concept considers both abiotic and biotic environmental features to define spaces that organisms could occupy. Methods We combined abiotic ( A ), biotic ( B ), and movement ( M ) information (collectively, BAM model) to map the multidimensional niche of Prairie Chub Macrhybopsis australis , a regionally endemic freshwater fish currently under review for listing under the Endangered Species Act. We estimated A using remotely sensed environmental riverscape variables, B using the spatial distribution of a hybridization zone between Prairie Chub and Shoal Chub M. hyostoma , and M using data from a mark–recapture study. Result The BAM model estimated the spatial extent of multiple niches, including the Grinnellian ( A ; extent = 944 km of river), Eltonian ( B ; 2974 km), and fundamental niche (overlap of A + B ; 645 km) niches. When A , B , and M components were combined, the estimated extent of the Prairie Chub niche was 645 km. Conclusion Our work shows that the realized, multidimensional niche of Prairie Chub includes medium to large rivers with high habitat connectivity in the upper–middle Red River basin upstream of the distribution of Shoal Chub. The current Prairie Chub distribution could be maintained by preventing further habitat fragmentation and maintaining the environmental gradient separating Prairie Chub from Shoal Chub. Expansion of the species distribution may be possible through restoration of longitudinal fluvial connectivity.

North American Journal of Fisheries Management↗

USGS2020

Hydro-morphological characterization of coral reefs for wave runup prediction

Many coral reef-lined coasts are low-lying with elevations <4 m above mean sea level. Climate-change-driven sea-level rise, coral reef degradation, and changes in storm wave climate will lead to greater occurrence and impacts of wave-driven flooding. This poses a significant threat to their coastal communities. While greatly at risk, the complex hydrodynamics and bathymetry of reef-lined coasts make flood risk assessment and prediction costly and difficult. Here we use a large (>30,000) dataset of measured coral reef topobathymetric cross-shore profiles, statistics, machine learning, and numerical modeling to develop a set of representative cluster profiles (RCPs) that can be used to accurately represent the shoreline hydrodynamics of a large variety of coral reef-lined coasts around the globe. In two stages, the large dataset is reduced by clustering cross-shore profiles based on morphology and hydrodynamic response to typical wind and swell wave conditions. By representing a large variety of coral reef morphologies with a reduced number of RCPs, a computationally feasible number of numerical model simulations can be done to obtain wave runup estimates, including setup at the shoreline and swash separated into infragravity and sea-swell components, of the entire dataset. The predictive capability of the RCPs is tested against 5,000 profiles from the dataset. The wave runup is predicted with a mean error of 9.7–13.1%, depending on the number of cluster profiles used, ranging from 312 to 50. The RCPs identified here can be combined with probabilistic tools that can provide an enhanced prediction given a multivariate wave and water level climate and reef ecology state. Such a tool can be used for climate change impact assessments and studying the effectiveness of reef restoration projects, as well as for the provision of coastal flood predictions in a simplified (global) early warning system.

Frontiers in Marine Science↗

USGS2019

Wetland biomass and productivity in Coastal Louisiana: Base line data (1976-2015) and knowledge gaps for the development of spatially explicit models for ecosystem restoration and rehabilitation initiatives

Coastal Louisiana host 37% of the coastal wetland area in the conterminous US, including one of the deltaic coastal regions more susceptible to the synergy of human and natural impacts causing wetland loss. As a result of the construction of flood protection infrastructure, dredging of channels across wetlands for oil/gas exploration and maritime transport activities, coastal Coastal Louisiana hosts 37% of the coastal wetland area in the conterminous US, including one of the deltaic coastal regions more susceptible to the synergy of human and natural impacts causing wetland loss. As a result of the construction of flood protection infrastructure, dredging of channels across wetlands for oil/gas exploration and maritime transport activities, coastal Louisiana has lost approximately 4900 km2 of wetland area since the early 1930s. Despite the economic relevance of both wetland biomass and net primary productivity (NPP) as ecosystem services, there is a lack of vegetation simulation models to forecast the trends of those functional attributes at the landscape level as hydrological restoration projects are implemented. Here, we review the availability of peer-reviewed biomass and NPP wetland data (below and aboveground) published during the period 1976–2015 for use in the development, calibration and validation of high spatial resolution (<200 m × 200 m) vegetation process-based ecological models. We discuss and list the knowledge gaps for those species that represent vegetation community associations of ecological importance, including the long-term research issues associated to limited number of paired belowground biomass and productivity studies across hydrological basins currently undergoing different freshwater diversions management regimes and hydrological restoration priorities.

Louisiana↗

USGS2017

2010-2015 Juvenile fish ecology in the Nisqually River Delta and Nisqually Reach Aquatic Reserve

The return of tidal inundation to over 750 acres of the U. S. Fish and Wildlife Service Billy Frank Jr. Nisqually National Wildlife Refuge (NNWR) in fall of 2009 was the crowning moment in the effort to protect and restore the Nisqually Delta. The Nisqually NWR project complemented three earlier restoration projects completed by the Nisqually Indian Tribe (Tribe) on tribal property to restore over 900 acres of the estuary, representing the largest estuary restoration project in the Pacific Northwest and one of the most significant advances to date towards the recovery of Puget Sound (USFWS 2005). In 2011 the Washington Department of Natural Resources (WADNR established the over 14000 acre Nisqually Reach Aquatic Reserve (Reserve), complementing the protection and restoration successes in the Nisqually Delta. The Reserve includes all state-owned aquatic lands around Anderson, Ketron and Eagle islands and part of McNeil Island (Figure 1, WDNR 2011). The Reserve also includes a diverse assemblage of nearshore and offshore habitats important to resident and migratory fish including federal endangered species act listed fish like Chinook salmon (Oncorynchus tshawytscha) and steelhead (O. mykiss). Studies in the Nisqually Estuary (Ellings and Hodgson 2007, David et al. 2014, Ellings et al. 2016) and South Puget Sound (Duffy 2003) have summarized fish use of the area. However, the fish ecology of the reserve had not been systematically surveyed. The Tribe, U.S. Geological Survey (USGS), NNWR, Nisqually River Foundation (NRF), and others are currently conducting a multi-year, interdisciplinary, hypothesis-based research and monitoring study investigating the impact of delta restoration on estuarine processes, habitat structures, and functions. Our interdisciplinary monitoring framework enables us to link key estuarine processes with habitat development and biological response at multiple scales across the restored footprint, reference marshes, and throughout the Nisqually Reach. Key research components include hydrology and sediment regime, channel and marsh topography and development, vegetation colonization, and invertebrate, bird, and fish abundance, habitat use, and foraging ecology. After the Reserve was established, the WDNR and the research partnership led by the Tribe expanded the existing delta fish ecology assessment to include sampling stations throughout the Reserve. The results of the Reserve fish ecology assessment provide a unique regional analysis of fish ecology from the Nisqually River to McNeil Island.

Salmon Recovery Program Technical Report↗

USGS2008

Florida Integrated Science Center (FISC) Coral Reef Research

Coral reefs provide important ecosystem services such as shoreline protection and the support of lucrative industries including fisheries and tourism. Such ecosystem services are being compromised as reefs decline due to coral disease, climate change, overfishing, and pollution. There is a need for focused, integrated science to understand the complex ecological interactions and effects of these many stressors and to provide information that will effectively guide policies and best management practices to preserve and restore these important resources. The U.S. Geological Survey Florida Integrated Science Center (USGS-FISC) is conducting a coordinated Coral Reef Research Project beginning in 2009. Specific research topics are aimed at addressing priorities identified in the 'Strategic Science for Coral Ecosystems 2007-2011' document (U.S. Geological Survey, 2007). Planned research will include a blend of historical, monitoring, and process studies aimed at improving our understanding of the development, current status and function, and likely future changes in coral ecosystems. Topics such as habitat characterization and distribution, coral disease, and trends in biogenic calcification are major themes of understanding reef structure, ecological integrity, and responses to global change.

Fact Sheet↗

USGS2021

Assessment of sea lamprey (Petromyzon marinus) diet using DNA metabarcoding of feces

Sea lamprey ( Petromyzon marinus ) are invasive in the Laurentian Great Lakes, parasitize large-bodied fishes, and therefore are the focus of an international control program. However, damage caused by sea lamprey to modern day fish stocks remains uncertain because diet analysis of juvenile sea lamprey has been challenging; they feed on blood and are difficult to randomly sample in the lakes. Here, both challenges were addressed by showing that DNA metabarcoding of fecal material can be used to identify the diet of actively feeding juvenile sea lamprey, and can also be used to determine what non-feeding adult sea lamprey captured in streams fed on while parasitizing fish. Fecal samples from juvenile sea lamprey that were feeding on lake trout in northern Lake Huron overwhelmingly contained lake trout ( Salvelinus namaycush ) DNA (90%), while smaller percentages contained lake whitefish ( Coregonus clupeaformis ; 5%) and longnose sucker ( Catostomus catostomus ; 5%) DNA. Fecal samples from adult sea lamprey captured from a tributary to northern Lake Huron overwhelmingly contained longnose and white sucker DNA ( Catostomus spp.; 80%), while a smaller percentage contained lake trout DNA (10%). Diet composition of adult sea lamprey sampled in the tributary (Black Mallard Creek) was more diverse than juvenile diet composition. DNA metabarcoding suggests that Catostomus spp. may be an important host fish in northern Lake Huron for sea lamprey prior to spawning. Future research could investigate how diet varies across years and lakes and the prevalence and sources of DNA contamination. Application of DNA metabarcoding for diet assessment may be practical for identifying populations of invasive sea lamprey that feed on highly valued fishes and help guide restoration of lampreys worldwide.

Michigan↗

USGS2016

Historical dominance of low-severity fire in dry and wet mixed-conifer forest habitats of the endangered terrestrial Jemez Mountains salamander ( Plethodon neomexicanus )

Anthropogenic alteration of ecosystem processes confounds forest management and conservation of rare, declining species. Restoration of forest structure and fire hazard reduction are central goals of forest management policy in the western United States, but restoration priorities and treatments have become increasingly contentious. Numerous studies have documented changes in fire regimes, forest stand structure and species composition following a century of fire exclusion in dry, frequent-fire forests of the western U.S. (e.g., ponderosa pine and dry mixed-conifer). In contrast, wet mixed-conifer forests are thought to have historically burned infrequently with mixed- or high-severity fire—resulting in reduced impacts from fire exclusion and low restoration need—but data are limited. In this study we quantified the current forest habitat of the federally endangered, terrestrial Jemez Mountains salamander (Plethodon neomexicanus) and compared it to dendroecological reconstructions of historical habitat (e.g., stand structure and composition), and fire regime parameters along a gradient from upper ponderosa pine to wet mixed-conifer forests. We found that current fire-free intervals in Jemez Mountains salamander habitat (116–165 years) are significantly longer than historical intervals, even in wet mixed-conifer forests. Historical mean fire intervals ranged from 10 to 42 years along the forest gradient. Low-severity fires were historically dominant across all forest types (92 of 102 fires). Although some mixed- or highseverity fire historically occurred at 67% of the plots over the last four centuries, complete mortality within 1.0 ha plots was rare, and asynchronous within and among sites. Climate was an important driver of temporal variability in fire severity, such that mixed- and high-severity fires were associated with more extreme drought than low-severity fires. Tree density in dry conifer forests historically ranged from open (90 trees/ha) to moderately dense (400 trees/ha), but has doubled on average since fire exclusion. Infill of fire-sensitive tree species has contributed to the conversion of historically dry mixedconifer to wet mixed-conifer forest. We conclude that low-severity fire, which has been absent for over a century, was a critical ecosystem process across the forest gradient in Jemez Mountains salamander habitat, and thus is an important element of ecosystem restoration, resilience, and rare species recovery.

Forest Ecology and Management↗

USGS2006

Genetic structure of natural and restored shoalgrass Halodule wrightii populations in the NW Gulf of Mexico

The decline of seagrass communities worldwide has sparked an urgent need for effective restoration strategies, which require a working knowledge of population genetic structure. Halodule wrighti is a common seagrass of the Caribbean region that is being restored to areas of the Gulf of Mexico, yet little is known of its population genetics. This study provides an assessment of individual, clonal and population effects on the genetic structure of 4 natural H. wrightii populations occupying 170 km of coastline in and around Galveston Bay, Texas, for comparison with 7 restored populations ranging in age from 2 to 7 yr. By using molecular markers, in the form of amplified fragment length polymorphisms (AFLPs), we found considerable variation in clonal richness at the population scale (from 0.54 to 0.82), with the restored populations occupying an intermediate to high position within this range. Replicate sampling within individual seagrass beds of 3 to 5m diameter generally revealed higher levels of clonal richness, elevated by 4 to 22% over that at the population scale, suggesting that seed recruitment is more important at the local scale than at distances of >10 m. Genetic diversity was 2 to 3 times less than that expected for a widespread, outcrossing species like H. wrightii, although a 170% increase in the frequency of variable markers relative to the mean for all other populations was noted for a volunteer population that had recruited from a mixture of donor materials planted at a nearby restoration site. Within the spatial extent of this study, natural populations adhered to a model of isolation-by-distance, whereas donor materials from these same natural populations were undergoing a rapid genetic convergence within a restored site where they had been planted together.

Texas↗

USGS2023

Coastal vegetation responses to large dam removal on the Elwha River

Introduction: Large dam removals provide a restoration opportunity for shrinking coastal wetland habitats. Dam removal can increase sediment delivery to sediment-starved river deltas and estuaries by restoring natural sediment transport and mobilizing reservoir-impounded sediment. However, rapid mobilization of massive quantities of sediment stored behind large dams also constitutes a major ecological perturbation. Information is lacking on coastal habitat responses to sediment pulses of this magnitude. Methods: Removal of two large dams along the Elwha River (Washington, USA) in 2011–2014 released ~20.5 Mt of impounded sediment, ~5.4 Mt of which were deposited in the delta and estuary (hereafter, delta). We used time series of aerial imagery, digital elevation models, and vegetation field sampling to examine plant community responses to this sediment pulse across seven years during and after dam removal. Results: Between 2011 and 2018, the Elwha River delta increased by ~26.8 ha. Vegetation colonized ~16.4 ha of new surfaces, with mixed pioneer vegetation on supratidal beach, river bars, and river mouth bars and emergent marsh vegetation in intertidal aquatic habitats. Colonization occurred on surfaces that were higher and more stable in elevation and farther from the shoreline. Compared to established delta plant communities, vegetation on new surfaces had lower cover of dominant species and functional groups, with very low woody cover, and lower graminoid cover than dunegrass and emergent marsh communities. Over time following surface stabilization, however, vegetation on new surfaces increased in species richness, cover, and similarity to established communities. By 2018, ~1.0 ha of vegetation on new surfaces had developed into dunegrass or willow–alder communities and ~5.9 ha had developed into emergent marsh. At the same time, dam removal had few discernible effects on established delta plant communities. Discussion: Together, these results suggest that rapid sediment mobilization during large dam removal has potential to expand coastal wetland habitat without negatively affecting established plant communities. However, as sediment loads declined in 2016–2018, new delta surfaces decreased by ~4.5 ha, and ~1.6 ha of new vegetation reverted to no vegetation. Long-term persistence of the expanded coastal habitat will depend on ongoing erosional and depositional processes under the restored natural sediment regime.

Washington↗

USGS2019

Floodplains provide important amphibian habitat despite multiple ecological threats

Floodplain ponds and wetlands are productive and biodiverse ecosystems, yet they face multiple threats including altered hydrology, land use change, and non‐native species. Protecting and restoring important floodplain ecosystems requires understanding how organisms use these habitats and respond to altered environmental conditions. We developed Bayesian models to evaluate occupancy of six amphibian species across 103 off‐channel aquatic habitats in the Chehalis River floodplain, Washington State, USA. The basin has been altered by changes in land use, reduced river–wetland connections, and the establishment of non‐native American bullfrogs ( Rana catesbeiana = Lithobates catesbeianus ) and centrarchid fishes, all of which we hypothesized could influence native amphibian occupancy. Despite potential threats, the floodplain habitats had relatively high rates of native amphibian occupancy, particularly when compared to studies from non‐floodplain habitats within the species’ native ranges. The biggest challenge for native amphibians appears to be non‐native centrarchid fishes, which strongly reduced occupancy of two native amphibians: the northern red‐legged frog ( Rana aurora ) and the northwestern salamander ( Ambystoma gracile ). Emergent vegetative cover increased occupancy probability for all five native amphibian species, indicating that plant management may offer a strategy to counter the negative effect of centrarchids by providing refuge from predation. We found that temporary and permanent hydroperiod sites supported different species; hence, both should be conserved on the landscape. Lastly, human‐created and natural ponds had similar amphibian occupancy patterns, suggesting that pond construction offers a viable strategy for adding habitats to the floodplain landscape. Overall, floodplain ponds and wetlands provide important amphibian habitat, and we offer management strategies that will bolster amphibian occupancy in an altered floodplain landscape.

Washington↗

USGS1999

Contribution of research to management and recovery of the roseate tern: review of a twelve-year project

The Northwest Atlantic population of the Roseate Tern (Sterna dougallii) is largely confined to a small breeding area along the northeast coast of the USA between 40? and 42?N. This population was listed as endangered in the USA in 1987 because it was dangerously concentrated into a few breeding sites (85% on two islands in the 1980s). The nesting population in the area from Long Island, New York to Cape Cod, Massachusetts has been studied intensively since 1987, in conjunction with a program of management of the breeding colonies. This paper summarizes the results of the research program and discusses the extent to which it has contributed to effective management. The regional population now numbers about 4,000 breeding pairs and has been increasing slowly since 1987, except between 1991 and 1992 when it declined by about 17%. This decline was probably caused by Hurricane `Bob' in August 1991. Roseate Terns have specialized foraging habits and are concentrated into a small number of foraging areas near the nesting colonies. The historically important breeding sites were taken over by large gulls between 1930 and 1972. Many of the terns moved to less suitable sites near the mainland, where they are subject to predation by mainland-based predators. Despite this, Roseate Terns breed with high success at many sites. The sex-ratio is skewed towards females; about 12% of nests are attended by female-female pairs. The annual adult survival rate (0.83) is unusually low for a seabird. Most mortality occurs away from the breeding grounds, but the winter quarters remained unknown until one roost site was found in Brazil in 1995-1997. A major management goal has been to restore former colony-sites by eliminating nesting gulls, but the success of some of these projects has been questionable because they may have attracted birds to sites with higher levels of predation. Although the research has yielded important information about the biology and demography of the species, it has taken longer than expected to obtain and analyze data from multiple sites on this long-lived species. Most work has been carried out at breeding sites: critical studies on feeding ecology and winter ecology have been hampered by insufficient funding and the paucity of self-motivated biologists. Hence, the program has not yet provided all the keys to restoring the population.

Waterbirds↗

USGS2017

Effectiveness of environmental flows for riparian restoration in arid regions: A tale of four rivers

Environmental flows have become important restoration tools on regulated rivers. However, environmental flows are often constrained by other demands within the river system and thus typically are comprised of smaller water volumes than the natural flows they are meant to replace, which can limit their functional efficacy. We review environmental flow programs aimed at restoring riparian vegetation on four arid zone rivers: the Tarim River in China; the Bill Williams River in Arizona, U.S.; the delta of the Colorado River in Mexico; and the Murrumbidgee River in southern Australia. Our goal is to determine what worked and what did not work to accomplish restoration goals. The lower Tarim River in China formerly formed a “green corridor” across the Taklamakan Desert. The riparian zone deteriorated due to diversion of surface and groundwater for irrigated agriculture. A massive restoration program began in 2000 with release of 1038 million cubic meters of water over the first three years. Groundwater levels rose but the ecological response was less than expected politically, socially and within the scientific community. However, releases continued and by 2015 portions of the original iconic Populus euphratica (Euphrates poplar) forest were reestablished. The natural flow regime of the Bill Williams River was disrupted by construction of a dam in 1968, dramatically reducing peak flows along with associated fluvial processes. As a result, the channel narrowed and riparian vegetation expanded and was comprised largely of an introduced shrub species ( Tamarix spp.). Environmental flow releases including small, managed floods and sustained base flows have been implemented since the mid 1990’s to promote establishment and maintenance of native riparian trees (cottonwoods and willows) and have been successful, although in a “downsized” portion of the valley bottom. Experience from the Bill Williams was used to help design the Minute 319 environmental flow in the delta of the Colorado River in 2014. Water was released as a short, one-time pulse during spring with the intent of starting new cohorts of cottonwood and willow. However, fluvial disturbance was limited by the relatively small magnitude pulse, low flows did not continue throughout the growing season in some reaches, native tree recruitment was low, and most of the new plants recruited were Tamarix . The inundated portion of the floodplain did respond with a temporary increase in greenness as measured by satellite vegetation indices, however. The Murrumbidgee River in Australia is a tributary in the Murray-Darling River Basin, which supports iconic red gum ( Eucalyptus camaldulensis ) forests that depend on near-yearly floods for maintenance. During the recent Millennial Drought (2000–2010) environmental flows were provided on an experimental basis to small portions of the Yanga National Forest to see how much water was needed. As with the Colorado River delta, gains in vegetation vigor as measured by satellite vegetation indices following the flows were temporary. Environmental flows in the Bill Williams were able to restore enough overbank flooding and fluvial disturbance to promote some establishment of new cohorts of trees, but on the Colorado and Murrumbidgee Rivers larger volumes of total flows released over longer periods and targeted restoration will be needed to restore the ecosystems. A measure of success in restoring the Euphrates poplar forest on the Tarim and germinating new chorts of willows on the Bill Williams has been achieved after 15–20 years of environmental flows, but the Colorado River delta and Murrumbidgee Rivers have only received one or two flows. Success in enhancing native trees in the Colorado delta has been achieved in restoration plots, but the Murrumbidgee will require large overbank flows on a continuing schedule to rejuvenate the red gum forest.

Ecological Engineering↗