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USGS2015

Post-Hurricane Ivan coastal oblique aerial photographs collected from Crawfordville, Florida, to Petit Bois Island, Mississippi, September 17, 2004

The U.S. Geological Survey (USGS) conducts baseline and storm response photography missions to document and understand the changes in vulnerability of the Nation's coasts to extreme storms. On September 17, 2004, the USGS conducted an oblique aerial photographic survey from Crawfordville, Florida, to Petit Bois Island, Mississippi aboard a Piper Navajo Chieftain (aircraft) at an altitude of 500 feet (ft) and approximately 1,000 ft offshore. This mission was flown to collect post-Hurricane Ivan data for assessing incremental changes in the beach and nearshore area since the last survey in 2001, and the data can be used in the assessment of future coastal change. The images provided in this report are Joint Photographic Experts Group (JPEG) images. ExifTool was used to add the following to the header of each photo: time of collection, Global Positioning System (GPS) latitude, GPS longitude, keywords, credit, artist (photographer), caption, copyright, and contact information. The photograph locations are an estimate of the position of the aircraft and do not indicate the location of any feature in the images. These photographs document the state of the barrier islands and other coastal features at the time of the survey. Pages containing thumbnail images of the photographs, referred to as contact sheets, were created in 5-minute segments of flight time. These segments can be found on the Photos and Maps page. The photographs can be opened directly with any JPEG-compatible image viewer by clicking on a thumbnail on the contact sheet. Table 1 provides detailed information about the GPS location, image name, date, and time for each of the 3,381 photographs taken, along with links to each photograph. The photographs are organized into segments, also referred to as contact sheets, and represent approximately 5 minutes of flight time. In addition to the photographs, a Google Earth Keyhole Markup Language (KML) file is provided, which can be used to view the images by clicking on the marker and then clicking on either the thumbnail or the link above the thumbnail. The KML files were created using the photographic navigation files.

Alabama, Florida, Mississippi↗

USGS2009

Bromide, Chloride, and Sulfate Concentrations, and Specific Conductance, Lake Texoma, Texas and Oklahoma, 2007-08

The U.S. Geological Survey, in cooperation with the City of Dallas Water Utilities Division, collected water-quality data from 11 sites on Lake Texoma, a reservoir on the Texas-Oklahoma border, during April 2007-September 2008. At 10 of the sites, physical properties (depth, specific conductance, pH, temperature, dissolved oxygen, and alkalinity) were measured and samples were collected for analysis of selected dissolved constituents (bromide, calcium, magnesium, potassium, sodium, carbonate, bicarbonate, chloride, and sulfate); at one site, only physical properties were measured. The primary constituent of interest was bromide. Bromate can form when ozone is used to disinfect raw water containing bromide, and bromate is a suspected human carcinogen. Chloride and sulfate were of secondary interest. Only the analytical results for bromide, chloride, sulfate, and measured specific conductance are discussed in this report. Median dissolved bromide concentrations ranged from 0.28 to 0.60 milligrams per liter. The largest median dissolved bromide concentration (0.60 milligram per liter at site 11) was from the Red River arm of Lake Texoma. Dissolved bromide concentrations generally were larger in the Red River arm of Lake Texoma than in the Washita arm of the lake. Median dissolved chloride concentrations were largest in the Red River arm of Lake Texoma at site 11 (431 milligrams per liter) and smallest at site 8 (122 milligrams per liter) in the Washita arm. At site 11 in the Red River arm, the mean and median chloride concentrations exceeded the secondary maximum contaminant level of 300 milligrams per liter for chloride established by the 'Texas Surface Water Quality Standards' for surface-water bodies designated for the public water supply use. Median dissolved sulfate concentrations ranged from 182 milligrams per liter at site 4 in the Big Mineral arm to 246 milligrams per liter at site 11 in the Red River arm. None of the mean or median sulfate concentrations exceeded the secondary maximum contaminant level of 300 milligrams per liter. Median specific conductance measurements at sites ranged from 1,120 microsiemens per centimeter at site 8 in the Washita arm to 2,100 microsiemens per centimeter in the Red River arm. The spatial distribution of specific conductance in Lake Texoma was similar to that of bromide and chloride, with larger specific conductance values in the Red River arm compared to those in the Washita arm.

Data Series↗

USGS2016

Post-Hurricane Irene coastal oblique aerial photographs collected from Ocracoke Inlet, North Carolina, to Virginia Beach, Virginia, August 30-31, 2011

The U.S. Geological Survey (USGS), as part of the National Assessment of Coastal Change Hazards project, conducts baseline and storm-response photography missions to document and understand the changes in vulnerability of the Nation's coasts to extreme storms (Morgan, 2009). On August 30-31, 2011, the USGS conducted an oblique aerial photographic survey from Ocracoke Inlet, North Carolina, to Virginia Beach, Virginia, aboard a Piper Navajo Chieftain (aircraft) at an altitude of 500 feet (ft) and approximately 1,200 ft offshore. This mission was flown to collect post-Hurricane Irene data for assessing incremental changes in the beach and nearshore area since the last survey, flown in May 2008, and the data can be used in the assessment of future coastal change. The photographs provided in this report are Joint Photographic Experts Group (JPEG) images. ExifTool was used to add the following to the header of each photo: time of collection, Global Positioning System (GPS) latitude, GPS longitude, keywords, credit, artist (photographer), caption, copyright, and contact information. The photograph locations are an estimate of the position of the aircraft at the time the photograph was taken and do not indicate the location of any feature in the images (see the Navigation Data page). These photographs document the state of the barrier islands and other coastal features at the time of the survey. Pages containing thumbnail images of the photographs, referred to as contact sheets, were created in 5-minute segments of flight time. These segments can be found on the Photos and Maps page. Photographs can be opened directly with any JPEG-compatible image viewer by clicking on a thumbnail on the contact sheet. Table 1 provides detailed information about the GPS location, image name, date, and time for each of the 2,688 photographs that were taken along with links to each photograph. In addition to the photographs, a Google Earth Keyhole Markup Language (KML) file is provided and can be used to view the images by clicking on the marker and then clicking on either the thumbnail or the link above the thumbnail. The KML also shows the track of Hurricane Irene. The KML files were created using the photographic navigation files. These KML file(s) can be found in the kml folder.

North Carolina, Virginia↗

USGS2008

Continuous Temperature and Water-Level Data Collected for a Heat Tracer Study on a Selected Reach of Tri-State Canal, Western Nebraska, 2007

The water supply in parts of the North Platte River Basin in the Nebraska Panhandle has been designated as fully appropriated or over appropriated by the Nebraska Department of Natural Resources. Recent legislation (LB 962) requires the North Platte Natural Resources District and the Nebraska Department of Natural Resources to develop an Integrated Management Plan to balance ground- and surface-water supply and demand within the North Platte Natural Resources District. For a ground-water-flow model to accurately simulate existing or future ground-water and surface-water conditions, accurate estimates of specific input variables such as streambed conductance or canal-seepage rates are required. As of 2008, the values input into ground-water models were estimated on the basis of interpreted lithology from test holes and geophysical surveys. Often, contrasts of several orders of magnitude exist for streambed conductance among the various sediment textures present locally, and thin, near-surface layers of fine sediment can clog the streambed, substantially reducing conductance. To accurately quantify the rates of leakage from irrigation canals and estimate ground-water recharge, the U.S. Geological Survey, in cooperation with the North Platte Natural Resources District, collected continuous temperature and water-level data to use heat as a tracer for a selected reach of Tri-State Canal west of Scottsbluff, Nebraska. Continuous records of subsurface temperature, ground-water level, canal stage, and water temperature, and sediment core data are presented in this report. Subsurface temperature was monitored at four vertical sensor arrays of thermocouples installed at various depths beneath the canal bed from March through September 2007. Canal stage and water temperature were measured from June to September 2007. Ground-water level was recorded continuously in an observation well drilled near the subsurface temperature monitoring site. These data sets were collected for use as inputs for a computer model to estimate the vertical hydraulic conductivity. Before the initiation of flow, diurnal variations in subsurface temperature occurred because of daytime heating and nighttime cooling of bed sediment. Flow in Tri-State Canal was first detected on June 16 at the monitoring site as a disruption in the temperature signal in the shallowest thermocouple in all four vertical sensor arrays. This disruption in the temperature pattern occurred in deeper thermocouples at slightly later times during the rapid infiltration of canal water. The ground-water level began to rise approximately 23 hours after flow was first detected at the monitoring site. Canal stage rose for 7 days until the maximum flow capacity of the canal was approached on June 23, 2007. Measured water temperatures ranged from 18 to 25 degrees Celsius (C) while the canal was flowing near maximum capacity. Small diurnal variations of 1.0 to 1.5 degrees C in water temperature were recorded during this time. Measured ground-water levels rose constantly during the entire irrigation season until levels peaked on September 3, 2007, 3 days after diversions to Tri-State Canal ceased.

Data Series↗

USGS2015

Hydrogeologic data and water-quality data from a thick unsaturated zone at a proposed wastewater-treatment facility site, Yucca Valley, San Bernardino County, California, 2008-11

The Hi-Desert Water District, in the community of Yucca Valley, California, is considering constructing a wastewater-treatment facility and using the reclaimed water to recharge the aquifer system through surface spreading. The Hi-Desert Water District is concerned with possible effects of this recharge on water quality in the underlying groundwater system; therefore, an unsaturated-zone monitoring site was constructed by the U.S. Geological Survey (USGS) to characterize the unsaturated zone, monitor a pilot-scale recharge test, and, ultimately, to monitor the flow of reclaimed water to the water table once the treatment facility is constructed. In June and July 2008, a borehole (YVUZ-5) was drilled by the USGS through the unsaturated zone in the vicinity of the proposed wastewater-treatment facility site by using an overburden drilling method. In addition to a variety of unsaturated-zone instrumentation, an observation well screened near the water table was installed in the borehole. The drilling procedures, lithologic and geophysical data, construction details, physical properties of unsaturated alluvial deposits, and instrumentation installed in YVUZ-5 are described in this report. Core material was analyzed for bulk-density, porosity, effective porosity, volumetric water content, residual water content, saturation, effective saturation, matric-potential, and saturated hydraulic conductivity. Concentrations of soluble anions, including bromide, chloride, fluoride, sulfate, nitrate, nitrite, phosphate, and orthophosphate, in unsaturated-zone sediment and dissolved in unsaturated-zone water were determined by analyzing water extracted from drill-cutting material. A 0.1-acre pilot-scale infiltration pond was constructed in the vicinity of YVUZ-5. Water was applied to the pond over a period of about 8 months and allowed to infiltrate into the underlying unsaturated zone. Data were collected on chemical and isotopic composition of the groundwater, unsaturated-zone water, and infiltration pond water before, during, and after infiltration of water from the constructed pond. Selected drill cuttings and core samples collected during drilling were analyzed for the presence or absence of denitrifying and nitrate-reducing bacteria. Water levels in the observation well ranged from about 367 to 370 feet below land surface during the period of the study. Measured saturated hydraulic conductivity of core material ranged from 2.1 to 11.0 feet per day. Average vertical infiltration rates in the pilot-scale infiltration pond ranged from 0.7 to 2.4 feet per day. Both denitrifying and nitrate-reducing bacteria were present in drill cutting material in most probable numbers ranging from below detection limits to 2,400,000 for denitrifying and to 93,000 for nitrate-reducing bacteria.

California↗

USGS2012

Archive of side scan sonar and swath bathymetry data collected during USGS cruise 10CCT03 offshore of the Gulf Islands National Seashore, Mississippi, from East Ship Island, Mississippi, to Dauphin Island, Alabama, April 2010

In April of 2010, the U.S. Geological Survey (USGS) conducted a geophysical survey from the east end of East Ship Island, Miss., extending to the middle of Dauphin Island, Ala. (fig. 1). This survey had a dual purpose: (1) to interlink previously conducted nearshore geophysical surveys (shoreline to ~2 km) with those of offshore surveys (~2 to ~9 km) in the area, and (2) to extend the geophysical survey to include a portion of the Dauphin Island nearshore zone. The efforts were part of the USGS Gulf of Mexico Science Coordination partnership with the U.S. Army Corps of Engineers (USACE) to assist the Mississippi Coastal Improvements Program (MsCIP) and the Northern Gulf of Mexico (NGOM) Ecosystem Change and Hazards Susceptibility Project by mapping the shallow geological stratigraphic framework of the Mississippi Barrier Island Complex. These geophysical surveys will provide the data necessary for scientists to define, interpret, and provide baseline bathymetry and seafloor habitat for this area and to aid scientists in predicting future geomorpholocial changes of the islands with respect to climate change, storm impact, and sea-level rise. Furthermore, these data will provide information for barrier island restoration feasibility, particularly in Camille Cut, and efforts for the preservation of historical Fort Massachusetts. For more information refer to http://ngom.usgs.gov/gomsc/mscip/. This report serves as an archive of the processed multibeam bathymetry and side scan sonar (SSS) data. Data products herein include gridded and interpolated digital depth surfaces, seabed surface backscatter imagery, and x,y,z data products for both multibeam bathymetry and side scan sonar imagery. Additional files include trackline maps, navigation files, geograpahic information system (GIS) files, Field Activity Collection System (FACS) logs, and formal Federal Geographic Data Committee (FGDC) metadata. Scanned images of the handwritten FACS logs and digital FACS logs are also provided as PDF files. Refer to the Acronyms page for description of acronyms and abbreviations used in this report or hold the cursor over an acronym for a pop-up explanation. The USGS St. Petersburg Coastal and Marine Science Center assigns a unique identifier to each cruise or field activity. For example, 10CCT03 tells us the data were collected in 2010 for the Coastal Change and Transport (CCT) study and the data were collected during the third (03) field activity for that project in that calendar year. Refer to http://walrus.wr.usgs.gov/infobank/programs/html/definition/activity.html for a detailed description of the method used to assign the field activity ID. Data were collected aboard the U.S. Army Corps of Engineers (USACE) SV Irvington , a 56-foot (ft) Kvichak Marine Industries, Inc., catamaran (fig. 2). Side scan sonar and multibeam bathymetry data were collected simultaneously along the tracklines. The side scan sonar towfish was towed off the starboard side just slightly behind the vessel, close to the seafloor. The multibeam transducer was attached to a retractable strut-arm lowered between the catamaran hulls. Navigation was acquired with an Applanix POS MV and differentially corrected using the broadcast signal from a local National Geodetic Survey (NGS) Continuously Operating Reference Station (CORS) beacon. See the digital FACS equipment log for details about the acquisition equipment used. Raw datasets were stored digitally and processed using HYPACK Inc., HYSWEEP software at the USACE Mobile, Ala., District office. For more information on processing refer to the Equipment and Processing page. Chirp seismic data were also collected during this survey and are archived separately.

Gulf Islands National Seashore↗

USGS2008

Selected Water- and Sediment-Quality, Aquatic Biology, and Mine-Waste Data from the Ely Copper Mine Superfund Site, Vershire, VT, 1998-2007

The data contained in this report are a compilation of selected water- and sediment-quality, aquatic biology, and mine-waste data collected at the Ely Copper Mine Superfund site in Vershire, VT, from August 1998 through May 2007. The Ely Copper Mine Superfund site is in eastern, central Vermont (fig. 1) within the Vermont Copper Belt (Hammarstrom and others, 2001). The Ely Copper Mine site was placed on the U.S. Environmental Protection Agency (USEPA) National Priorities List in 2001. Previous investigations conducted at the site documented that the mine is contributing metals and highly acidic waters to local streams (Hammarstrom and others, 2001; Holmes and others, 2002; Piatak and others, 2003, 2004, and 2006). The U.S. Geological Survey (USGS), in cooperation with the USEPA, compiled selected data from previous investigations into uniform datasets that will be used to help characterize the extent of contamination at the mine. The data may be used to determine the magnitude of biological impacts from the contamination and in the development of remediation activities. This report contains analytical data for samples collected from 98 stream locations, 6 pond locations, 21 surface-water seeps, and 29 mine-waste locations. The 98 stream locations are within 3 streams and their tributaries. Ely Brook flows directly through the Ely Copper Mine then into Schoolhouse Brook (fig. 2), which joins the Ompompanoosuc River (fig. 1). The six pond locations are along Ely Brook Tributary 2 (fig. 2). The surface-water seeps and mine-waste locations are near the headwaters of Ely Brook (fig. 2 and fig. 3). The datasets 'Site_Directory' and 'Coordinates' contain specific information about each of the sample locations including stream name, number of meters from the mouth of stream, geographic coordinates, types of samples collected (matrix of sample), and the figure on which the sample location is depicted. Data have been collected at the Ely Copper Mine Superfund site by the USEPA, the Vermont Department of Environmental Conservation (VTDEC), and the USGS. Data also have been collected on behalf of USEPA by the following agencies: Arthur D. Little Incorporated (ADL), U.S. Army Cold Region Research and Engineering Laboratory (CRREL), URS Corporation (URS), USEPA, and USGS. These data provide information about the aquatic communities and their habitats, including chemical analyses of surface water, pore water, sediments, and fish tissue; assessments of macroinvertebrate and fish assemblages; physical characteristics of sediments; and chemical analyses of soil and soil leachate collected in and around the piles of mine waste.

Data Series↗

USGS2015

Water- and air-quality and surficial bed-sediment monitoring of the Sweetwater Reservoir watershed, San Diego County, California, 2003-09

In 1998, the U.S. Geological Survey, in cooperation with the Sweetwater Authority, began a study to assess the overall health of the Sweetwater watershed in San Diego County, California. This study was designed to provide a data set that could be used to evaluate potential effects from the construction and operation of State Route 125 within the broader context of the water quality and air quality in the watershed. The study included regular sampling of water, air, and surficial bed sediment at Sweetwater Reservoir (SWR) for chemical constituents, including volatile organic compounds (VOCs), base-neutral and acid- extractable organic compounds (BNAs) that include polycyclic aromatic hydrocarbons (PAHs), pesticides, and metals. Additionally, water samples were collected for anthropogenic organic indicator compounds in and around SWR. Background water samples were collected at Loveland Reservoir for VOCs, BNAs, pesticides, and metals. Surficial bed-sediment samples were collected for PAHs, organochlorine pesticides, and metals at Sweetwater and Loveland Reservoirs. To monitor changes in contaminant concentration in water and air at SWR during the construction and operation of State Route 125, this study was divided into three phases. Phase One sampling (September 1998 to September 2004) was designed to establish baseline conditions for target compounds in terms of detection frequency and concentration in air and water. Phase Two (October 2004 to September 2007) continued sampling at selected monitoring sites during construction of State Route 125 to assess any effect from the construction process and the use of heavy equipment to build the roadway. Phase Three (October 2007 to August 2009) continued sampling for 2 years after the opening of State Route 125 to assess the potential changes in water quality related to vehicle emissions from the roadway alignment. Surficial bed-sediment samples were collected three times during the study—at the beginning of the study, at the start of Phase Two, and at the end of the study. This report describes the study design and the sampling and analytical methods and presents data from water, air, and surficial bed-sediment samples collected from the sixth to eleventh years of the study (October 2003–August 2009), spanning the last year of Phase one and all of Phases Two and Three. Data collected during the first 5 years of sampling have been previously published. Three types of quality-control samples were used in this study—matrix spikes, blanks, and replicates. Matrix-spike data are considered to be adequate if the recovery concentration is within 30 percent of the matrix concentration. Replicate data are considered to be adequate if the replicate sample concentration is within 30 percent of the environmental sample concentration. Additionally, surrogate compounds were added to most samples to monitor sample-specific performance of the analytical method. Most VOC matrix-spike recovery data associated with water samples are within acceptable criteria, but three VOCs had recoveries below the acceptable criteria; these compounds may not have been detected in water samples if they were present at low concentrations. Data for blanks associated with water samples for VOCs and metals showed no detections above their laboratory reporting levels. Most replicate data are within acceptable criteria. Quality-control data for VOC air samples resulted in flagging several reported concentrations for acetone, benzene, ethenylbenzene, and naphthalene because they may be biased high. Acetone, benzene, and toluene were detected at low concentrations in almost every VOC air blank. Some PAH and pesticide concentrations in air samples were designated as estimated because of method performance limitations. PAHs in surficial bed sediment had 83 percent of surrogates below the acceptable criteria. No matrix-spike data for metals in surficial bed sediment were outside the acceptable criteria; only beryllium had a replicate comparison outside the acceptable criteria. Sampling results show concentrations of the gasoline oxygenate methyl tert -butyl ether in water and air samples declined after it was phased out by the State of California in January 2004. The largest concentrations of gasoline hydrocarbons benzene and toluene in water were detected at or near the surface of the SWR. Isophorone and phenol were the two most frequently detected BNA compounds in water. Diuron, prometon, and simazine were the most frequently detected pesticide compounds in water. Concentrations of benzene and toluene in air samples were highest during the cooler months and had a consistent seasonal pattern over time. Ten PAH compounds were detected frequently in air samples. Twelve pesticide compounds were also detected in air samples. Surficial bed-sediment samples were analyzed for 53 PAHs; 22 of the compounds had one or more detections. Surficial bed-sediment samples were analyzed for 22 organic compounds; only 6 compounds had one or more detections. Surficial bed-sediment samples were analyzed for 37 metals.

California↗

USGS2013

Water quality, sediment characteristics, aquatic habitat, geomorphology, and mussel population status of the Clinch River, Virginia and Tennessee, 2009-2011

Chemical, physical, and biological data were collected during 2009-2011 as part of a study of the Clinch River in Virginia and Tennessee. The data from this study, data-collection methods, and laboratory analytical methods used in the study are documented in this report. The study was conducted to describe the conditions of the Clinch River and to determine if there are measurable differences in chemical, physical, or biological characteristics in a segment of the river where freshwater mussel populations are in decline, have low density, richness, little to no recruitment, and lack endangered species (low-quality reach) compared to a segment of the river where mussel assemblages have relatively high density, richness, evidence of recruitment, and support endangered species (high-quality reach). Five continuous water-quality monitors were installed and operated on the mainstem of the Clinch River and two tributaries. Discrete water-quality sample sets were collected during base-flow and stormflow conditions two sites on the Clinch River and on the Guest River, a tributary to the Clinch River predominantly in the Appalachian Plateaus Physiographic Province. Base-flow water-quality samples were collected in July and August 2011 at 15 sites along the mainstem of the Clinch River. Other analyses included longitudinal sampling along the mainstem of the Clinch River at 10 sites to evaluate bed-sediment chemistry, habitat condition, and mollusk community status. In situ freshwater mussel growth and mortality experiments were conducted with hatchery propogated Villosa iris (rainbow mussels). Tissue from the V. iris as well as tissue from 16 Actinonaias pectorosa mussels were analyzed for trace metals, and V. iris mussel tissue was analyzed for organic compounds. Data collected during this investigation were analyzed by various U.S. Geological Survey or U.S. Fish and Wildlife Service laboratories.

Tennessee, Virginia↗

USGS2022

Standard operating protocol for mark and recapture monitoring of Brook Floater in streams

The Brook Floater ( Alasmidonta varicosa ) is a small (<100 mm) freshwater mussel (Family: Unionidae) found in streams of the eastern United States (U.S.) (Nedeau 2008). While there has been limited effort to document the status of Brook Floater across its range, there is evidence of Brook Floater range contraction and declining local abundances over recent decades (Wicklow et al. 2017, NatureServe 2021). Brook Floater is a Species of Greatest Conservation Need (SGCN) in 15 states (94% of range); listed as endangered, threatened, or special concern in nearly every state and province where it still occurs; and has been extirpated from two states (Rhode Island and Delaware). Brook Floater was petitioned for Federal listing under the U.S. Endangered Species Act; however, the listing was determined not to be warranted (U.S. FWS 2019), although it remains a Regional SGCN of very high concern in U.S. Fish & Wildlife Service (U.S. FWS) Regions 5 (Terwilliger 2015) and 4 (SEAFWA-WDC 2019) and is an At-Risk Species in U.S. FWS Region 5. A critical component of understanding population declines is site-specific information about population density and demographics (e.g., growth, age structure) to assess population viability. This information had previously only been collected for a few populations of Brook Floater (e.g., Massachusetts Division of Fisheries & Wildlife, North Carolina Wildlife Resources Commission) and methods to collect these data varied from state to state, thus limiting comparisons across the range. In 2016, a competitive State Wildlife Grant (SWG) was awarded to develop a standardized monitoring technique that will aid in understanding differences in population viability across its range and assess changes in populations through time. The protocol described in this report was subsequently developed and tested by Massachusetts and Maine (2 sites in each state) and revised based on field experiences. Data collected using this protocol will allow for state managers to make informed decisions about management actions for Brook Floater. Monitoring approaches are ideally designed to meet management objectives. Management objectives are specific, quantifiable outcomes that reflect the values of the decision makers and relate directly to the management decisions (Conroy and Peterson 2013). Lack of well-defined objectives hinders success of conservation and management actions because there are undefined metrics to determine when the objectives have been met (Yoccoz et al. 2001, Nichols and Thompson 2006). While monitoring to understand a system (i.e., status and trends; Reynolds et al. 2016) provides baseline information for developing management recommendations in the future, Nichols and Thompson (2006) criticize status and trends monitoring because of time lags associated with conservation and the costs and resource availability needed for surveillance, among other reasons. State partners in the Brook Floater SWG have a variety of different monitoring objectives (e.g., abundance/density, survival, recruitment) that depend on the population sizes and demographics. There are many approaches for estimating population parameters such as density, age structure, recruitment, and growth rates. For example, presence/absence (i.e., multistate models), counts (i.e., multi-state models or Dail-Madsen model; Dail and Madsen 2011), and capture mark-recapture (CMR; e.g. Cormack-Jolly-Seber models; Lindberg and Rexstad 2002) are all approaches for assessing population status and viability.

Cooperator Science Series↗

USGS2004

Summary of total mercury concentrations in fillets of selected sport fishes collected during 2000-2003 from Lake Natoma, Sacramento County, California

This report summarizes results of total mercury measurements in skinless fillets of sport fishes collected during August 2000, September?October 2002, and July 2003 from Lake Natoma, a small (8,760 acre-feet) afterbay for Folsom Dam on the lower American River. The primary objective of the study was to determine if mercury concentrations in fillets approached or exceeded guidelines for human consumption. The Food and Drug Administration (FDA) human-health action level for methylmercury in commercially caught fish is 1.0 ?g/g (microgram per gram); the U.S. Environmental Protection Agency (USEPA) human-health criterion for methylmercury residue in fish tissue is 0.30 ?g/g. Wet weight concentrations of total mercury in skinless fillets were as high as 0.19 ?g/g in bluegill (Lepomis macrochirus), 0.39 ?g/g in redear sunfish (L. microlophus), 1.02 ?g/g in largemouth bass (Micropterus salmoides), and 1.89 ?g/g in channel catfish (Ictalurus punctatus). Maximum concentrations of mercury in other fish species varied from 0.10 ?g/g in rainbow trout (Oncorhynchus mykiss) to 0.56 ?g/g in white catfish (A-meiurus catus). Altogether, 1 of 86 largemouth bass and 11 of 11 channel catfish exceeded the FDA human-health action level. In addition, 1 of 20 redear sunfish, 26 of 86 largemouth bass, 2 of 3 spotted bass (M. punctulatus), 1 of 1 brown bullhead (A. nebulosus), and 1 of 1 white catfish exceeded the USEPA human-health criterion. These results indicate that some fish species inhabiting Lake Natoma contain undesirably high concentrations of mercury in their skinless fillets.

Data Series↗

USGS2005

Data on dissolved pesticides and volatile organic compounds in surface and ground waters in the San Joaquin-Tulare basins, California, water years 1992-1995

This report contains pesticide, volatile organic compound, major ion, nutrient, tritium, stable isotope, organic carbon, and trace-metal data collected from 149 ground-water wells, and pesticide data collected from 39 surface-water stream sites in the San Joaquin Valley of California. Included with the ground-water data are field measurements of pH, specific conductance, alkalinity, temperature, and dissolved oxygen. This report describes data collection procedures, analytical methods, quality assurance, and quality controls used by the National Water-Quality Assessment Program to ensure data reliability. Data contained in this report were collected during a four year period by the San Joaquin?Tulare Basins Study Unit of the United States Geological Survey's National Water-Quality Assessment Program. Surface-water-quality data collection began in April 1992, with sampling done three times a week at three sites as part of a pilot study conducted to provide background information for the surface-water-study design. Monthly samples were collected at 10 sites for major ions and nutrients from January 1993 to March 1995. Additional samples were collected at four of these sites, from January to December 1993, to study spatial and temporal variability in dissolved pesticide concentrations. Samples for several synoptic studies were collected from 1993 to 1995. Ground-water-quality data collection was restricted to the eastern alluvial fans subarea of the San Joaquin Valley. Data collection began in 1993 with the sampling of 21 wells in vineyard land-use settings. In 1994, 29 wells were sampled in almond land-use settings and 9 in vineyard land-use settings; an additional 11 wells were sampled along a flow path in the eastern Fresno County vineyard land-use area. Among the 79 wells sampled in 1995, 30 wells were in the corn, alfalfa, and vegetable land-use setting, and 1 well was in the vineyard land-use setting; an additional 20 were flow-path wells. Also sampled in 1995 were 28 wells used for a regional assessment of ground-water quality in the eastern San Joaquin Valley.

Data Series↗

USGS2010

Perchlorate data for streams and groundwater in selected areas of the United States, 2004

This report presents data collected as part of a reconnaissance study to evaluate the occurrence of perchlorate in rivers and streams and in shallow aquifers in selected areas of the United States. Perchlorate, a component in rocket fuels, fireworks, and some explosives is soluble in water and persists in soils and water for long periods. It is biologically active at relatively low-levels in the environment, and has been identified as an endocrine-disrupting chemical. The purpose of this reconnaissance was to determine the occurrence of perchlorate in agricultural areas of the Midwestern and North-Central United States and in arid Central and Western parts of the United States. Samples were collected from 171 sites on rivers and streams and 146 sites from wells during the summer and early fall of 2004. Samples were collected from surface-water sites in 19 states and from wells in 5 states. Perchlorate was detected in samples collected in 15 states and was detected in 34 of 182 samples from rivers and streams and in 64 of 148 groundwater samples at concentrations equal to or greater than 0.4 micrograms per liter. Perchlorate concentrations were 1.0 micrograms per liter or greater in surface-water samples from seven states and in groundwater samples in four states. Only one surface-water and one groundwater sample had concentrations greater than 5.0 micrograms per liter. Perchlorate concentrations in followup samples collected from 1 to 3 months after the initial sample were unchanged at four of five stream sites.

Data Series↗

USGS2011

Physical, chemical, and mineralogical data from surficial deposits, groundwater levels, and water composition in the area of Franklin Lake playa and Ash Meadows, California and Nevada

This report presents data and describes the methods used to determine the physical attributes, as well as the chemical and mineralogical composition of surficial deposits; groundwater levels; and water composition in the area of Franklin Lake playa and Ash Meadows, California and Nevada. The results support studies that examine (1) the interaction between groundwater and the ground surface, and the transport of solutes through the unsaturated zone; (2) the potential for the accumulation of metals and metalloids in surface crusts; (3) emission of dust from metal-rich salt crust; and (4) the effects of metal-rich dusts on human and ecosystem health. The evaporation of shallow (<3 to 4 m) groundwater in saline, arid environments commonly results in the accumulation of salt in the subsurface and (or) the formation of salt crusts at the ground surface. Ground-surface characteristics such as hardness, electrical conductivity, and mineralogy depend on the types and forms of these salt crusts. In the study area, salt crusts range from hard and bedded to soft and loose (Reynolds and others, 2009). Depending on various factors such as the depth and composition of groundwater and sediment characteristics of the unsaturated zone, salt crusts may accumulate relatively high contents of trace elements. Soft, loose salt crusts are highly vulnerable to wind erosion and transport. These vulnerable crusts, which may contain high contents of potentially toxic trace elements, can travel as atmospheric dust and affect human and ecosystem health at local to regional scales.

Nevada;California;Arizona↗

USGS2008

Hydraulic and substrate maps of reaches used by sturgeon ( Genus Scaphirhynchus ) in the Lower Missouri River, 2005-07

This report is a repository of reach-scale maps of hydraulic and substrate characteristics generated for the habitat-use portion of an interdisciplinary sturgeon research project on the Lower Missouri River (from Gavins Point Dam to the junction with the Mississippi River). The maps were derived from hydroacoustic data sets that were collected for the purpose of assessing physical aquatic habitat in the vicinity of locations of adult shovelnose sturgeon ( Scaphirhynchus platorynchus ) and pallid sturgeon ( S. albus ). Hydroacoustic data sets were collected at the reach scale (mean reach length, 2.4 kilometers) in order to include the immediate vicinity of a targeted sturgeon location as well as the full range of habitat available at the bend and crossover scale. Reaches typically were surveyed on the day following the relocation of a telemetered sturgeon and at a discharge within 10 percent of the discharge on the sturgeon relocation date in order to characterize as closely as possible the channel morphology and flow-field conditions at the time that the sturgeon was present. One hundred fifty-three reaches were mapped during April–September in the years 2005 through 2007, with the majority of data collection occurring in the months of May and June (coinciding with the period of sturgeon migration and spawning in the Lower Missouri River). Interpolated maps (grid cell size, 5 meters) depict depth, generalized substrate, and depth-averaged velocity. Side-scan sonar imagery is also available for a subset of reaches. Collectively, the maps represent more than 20 percent of the length of the Lower Missouri River.

Data Series↗

USGS2015

Hydrographic surveys at seven chutes and three backwaters on the Missouri River in Nebraska, Iowa, and Missouri, 2011-13

The U.S. Geological Survey cooperated with the U.S. Army Corps of Engineers (USACE), Omaha District, to complete hydrographic surveys of seven chutes and three backwaters on the Missouri River yearly during 2011–13. These chutes and backwaters were constructed by the USACE to increase the amount of available shallow water habitat (SWH) to support threatened and endangered species, as required by the amended “2000 Biological Opinion” on the operation of the Missouri River main-stem reservoir system. Chutes surveyed included Council chute, Plattsmouth chute, Tobacco chute, Upper Hamburg chute, Lower Hamburg chute, Kansas chute, and Deroin chute. Backwaters surveyed included Ponca backwater, Plattsmouth backwater, and Langdon backwater. Hydrographic data from these chute and backwater surveys will aid the USACE to assess the current (2011–13) amount of available SWH, the effects river flow have had on evolving morphology of the chutes and backwaters, and the functionality of the chute and backwater designs. Chutes and backwaters were surveyed from August through November 2011, June through November 2012, and May through October 2013. During the 2011 surveys, high water was present at all sites because of the major flooding on the Missouri River. The hydrographic survey data are published along with this report in comma-separated-values (csv) format with associated metadata. Hydrographic surveys included bathymetric and Real-Time Kinematic Global Navigation Satellite System surveys. Hydrographic data were collected along transects extending across the channel from top of bank to top of bank. Transect segments with water depths greater than 1 meter were surveyed using a single-beam echosounder to measure depth and a differentially corrected global positioning system to measure location. These depth soundings were converted to elevation using water-surface-elevation information collected with a Real-Time Kinematic Global Navigation Satellite System. Transect segments with water depths less than 1 meter were surveyed using Real-Time Kinematic Global Navigation Satellite Systems. Surveyed features included top of bank, toe of bank, edge of water, sand bars, and near-shore areas. Discharge was measured at chute survey sites, in both the main channel of the Missouri River upstream from the chute and the chute. Many chute entrances and control structures were damaged by floodwater during the 2011 Missouri River flood, allowing a larger percentage of the total Missouri River discharge to flow through the chute than originally intended in the chute design. Measured discharge split between the main channel and the chute at most chutes was consistent with effects of the 2011 Missouri River flood damages and a larger percent of the total Missouri River discharge was flowing through the chute than originally intended. The U.S. Army Corps of Engineers repaired many of these chutes in 2012 and 2013, and the resulting hydraulic changes are reflected in the discharge splits.

Iowa, Missouri, Nebraska↗

USGS2015

Estuarine bed-sediment-quality data collected in New Jersey and New York after Hurricane Sandy, 2013

This report describes a reconnaissance study of estuarine bed-sediment quality conducted June–October 2013 in New Jersey and New York after Hurricane Sandy in October 2012 to assess the extent of contamination and the potential long-term human and ecological impacts of the storm. The study, funded through the Disaster Relief Appropriations Act of 2013 (PL 113-2), was conducted by the U.S. Geological Survey in cooperation with the U.S. Environmental Protection Agency and the National Oceanographic and Atmospheric Administration. In addition to presenting the bed-sediment-quality data, the report describes the study design, documents the methods of sample collection and analysis, and discusses the steps taken to assure the quality of the data. Bed-sediment samples were collected from June to October 2013 from 167 estuarine sites extending from Cape May, New Jersey, to the New York Harbor and the eastern end of Long Island. Each sampling location and study region was characterized by using geographic information to identify potential contaminant sources. Characterizations included land cover, locations and types of businesses (industrial, financial, and others), spills (sewage, chemical, and others), bulk storage facilities, effluent discharges within 2 kilometers of the sampling point, and discharges within inundated and non-inundated regions near the sampling location. Samples were analyzed for particle size, total organic carbon, metals and trace elements, semivolatile organic compounds, wastewater compounds, hormones, and sediment toxicity. Samples were also screened using x-ray fluorescence, Fourier transform infrared spectroscopy, and x-ray diffraction. In addition, bioassays for endocrine disruptors and protein phosphatase 2A inhibition were conducted. The study was designed to provide the data needed to understand the extent and sources of contamination resulting from Hurricane Sandy, to compare the chemistry and toxicity of estuarine bed sediments before and after the storm, and to evaluate the usefulness of rapid screening and bioassay approaches in disaster settings.

New Jersey, New York↗

USGS2006

Thematic mapper-derived mineral distribution maps of Idaho, Nevada, and western Montana

This report provides mineral distribution maps based on TM spectral information of minerals commonly associated with hydrothermal alteration in Nevada, Idaho, and western Montana. The product of the processing is provided as four ESRI GRID files with 30 m resolution by state. UTM Zone 11 projection is used for Nevada (grid clsnv) and western Idaho (grid clsid), UTM Zone 12 is used for eastern Idaho and western Montana (grid clsid_mt). A fourth grid with a special Albers projection is used for the Headwaters project covering Idaho and western Montana (grid crccls_hs). Symbolization for all four grids is stored in the ESRI layer or LYR files and color or CLR files. Objectives of the analyses were to cover a large area very quickly and to provide data that could be used at a scale of 1:100,000 or smaller. Thus, the image processing was standardized for speed while still achieving the desired 1:100,000-scale level of detail. Consequently, some subtle features of mineralogy may be missed. The hydrothermal alteration data were not field checked to separate mineral occurrences due to hydrothermal alteration from those due to other natural occurrences. The data were evaluated by overlaying the results with 1:100,000 scale topographic maps to confirm correlation with known mineralized areas. The data were also tested in the Battle Mountain area of north-central Nevada by a weights-of-evidence correlation analysis with metallic mineral sites from the USGS Mineral Resources Data System and were found to have significant spatial correlation. On the basis of on these analyses, the data are considered useful for regional studies at scales of 1:100,000.

Data Series↗