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Baseline assessments for coral reef community structure and demographics on West Maui

The coastal and upslope terrains of West Maui have had a long history of impacts owing to more than a century of human activities. Resource extraction, agriculture, as well as residential and resort development have caused land-based pollution that impairs water quality and adversely impact the adjacent marine ecosystem. Today, West Maui’s coral reefs are chronically impacted by the effects of land-based pollution, mainly sedimentation and nutrients, with documented losses of 30 – 75% in coral cover over the last 20 years. Nonetheless, despite their current status and levels of environmental impact, these coral reef communities represent a key local resource and a counterpoint to the overall low coral reef development levels both island- and state-wide. This is of high relevance because the occurrence of coral-rich assemblages and accreted reef complexes statewide is sparse. Only limited segments along the coastlines of Maui, Hawai‘i, Lana‘i, Moloka‘i, and Kaho‘olawe, harbor mature, fringing coral reefs; and unfortunately, many of them are seriously threatened by terrestrial runoff. This report describes the results of baseline assessment surveys of coral reef benthic structure, coral community demographics, and coral condition. These surveys are intended to provide benchmarks for continued monitoring efforts and provide a gauge for comparing and evaluating the effectiveness of management actions to reduce land-based sources of pollution in priority watersheds on West Maui. Within this context, 12 permanent, long-term monitoring sites were strategically established adjacent to the 7 primary stream drainages (Wahikuli, Honokōwai, Mahinahina, Kahana/Ka‘opala, Honokeana, Honokahua, and Honolua) within the five priority watersheds (Wahikuli, Honokōwai, Kahana, Honokahua, and Honolua). Herein, benthic cover and composition, coral demographics, and coral condition of the monitoring sites are described and contrasted in the “Benthic Characterization” and “Synthesis and Discussion” sections of this report. The baseline assessments revealed that although some areas harbor prominent coral reef structures with high live coral cover and multispecies assemblages, others are characterized by sediment-impacted corals in impoverished and species-poor communities. Mean coral cover varied widely, from 49% at Wahikuli-shallow to 4.6% at Mahinahina-shallow. Similarly, coralline algal cover averaged 12.7% at Ka‘opala and Honokeana-north, but was altogether absent at the Mahinahina sites. Macroalgae was a minor component of the benthos across all study sites, representing only up to 2.3% at Mahinahina-south, while turf algae varied considerably, from 41% at Honokeana-north to 84% at the Honokahua site. Consequently, the Benthic Substrate Ratio (BSR) also varied considerably region wide, with the highest values (≥ 1), suggesting a healthier reef condition reported for the Wahikuli, Honokeana, and Honokōwai sites; and the lowest (≤ 0.5), suggesting impairment in structure and function, recorded at the Honolua and Honokahua sites. Adult colony densities were the highest at the Wahikuli (27 col/m 2 ) but lowest at the Ka‘opala (7 col/m2 ) site. And, colony partial mortality peaked at the Ka‘opala (33%) and was the lowest at the Honokeana Bay (12%). Moreover, in-situ and derived estimates of water turbidity and sediment loading revealed that the Ka‘opala and Wahikuli stream sites ranked the highest for turbidity, whereas the Honokōwai and Ka‘opala sites ranked highest for sediment loading. Chronic and episodic terrestrial sediment stress has resulted in coral reef community demise, clearly illustrated at the Honolua, Honokahua, and Ka‘opala sites, where coral benthic cover and colony abundances ranked the lowest and levels of turf algae ranked among the highest. Left unattended, land-based pollution impacts will continue to negatively affect the coral reef communities of West Maui. And, under the current turbidity and sediment loading conditions, the coral-rich habitats in the Wahikuli and Honōkowai Watersheds are probably at greatest risk, given they harbor the most prominent and well-developed reefs in the region, characterized by the highest coral cover, colony densities, and structural complexity.

Hawaii

Shorebirds in western North America: Late 1800s to late 1900s

Only anecdotal information is available to assess whether populations of the 47 shorebird species that breed or winter west of the Rocky Mountains changed in size or distribution during the past century. Unregulated hunting from 1870 to 1927 reduced populations of several species, at least temporarily, and was a factor in bringing the Eskimo Curlew ( Numenius borealis ) close to extinction. Large scale transformation of native grasslands and wetlands for agriculture and other purposes resulted in population declines and nesting range contractions of several temperate-zone breeders. In general, upland species were affected more than wetland species, breeding ranges contracted westward, and alteration of breeding habitat was the factor most responsible for range contractions and population declines. A ranking system assessing shorebird susceptibility to habitat alteration also predicted temperate breeders to be among the most vulnerable species to environmental change. The few estimates for current population sizes of western North American shorebirds range from fewer than 50 Eskimo Curlews to a few million Western Sandpipers ( Calidris mauri ), the most abundant species. Concentrations of at least 1000 shorebirds occur on migration at over 120 western North American sites and of 100,000 to 1,000,000 shorebirds at 18 sites. Whether populations are limited by conditions on breeding, wintering or migration ranges is unknown for most species. Expansion of ongoing programs coupled with economical new census efforts could be useful for monitoring the majority of western North American shorebirds during the next century.

Studies in Avian Biology

Small watershed studies: Analytical approaches for understanding ecosystem response to environmental change

Biogeochemical studies in small watersheds provide an analytical approach to understand how ecosystems respond to natural climatic variations and human-induced environmental change. Small watersheds, usually less than 5 km2, are small enough to permit characterization and understanding of ecosystem processes within relatively simple, homogeneous biological and physical settings; yet they are large enough to incorporate more complex processes and element cycles than can be studied at plot scales. Watersheds comprise discrete hydrochemical environments allowing quantification of hydrologic, element, and energy budgets. Element budgets, or mass balances, can be quantified as the difference between the mass of a solute that enters a watershed in wet and dry deposition and leaves a watershed in streamflow. Element budgets are primary tools used to investigate biogeochemical processes. Monitoring various aspects of element budgets to assess ecosystem health and stability is analogous to measuring the pulse or blood chemistry of a patient. Monitoring streamwater chemistry, basic climate, soil, and biotic variables provide a means to integrate complex biogeochemical processes and evaluate trends in water quality. Small watershed studies provide a scientific basis to develop predictive models of watershed function. Major emphases of small watershed studies include investigation of hydrologic and chemical responses to natural climate variation, anthropogenic stressors, and alternate forest-management practices. The nature and significance of biogeochemical research in small watersheds is reviewed by Moldan and Cerny (1994). The U.S. Geological Survey, U.S. Department of Agriculture Forest Service, and other federal agencies support several long-term small watershed studies to provide insight into a variety of ecosystem processes. Long-term records are essential to distinguish trends resulting from natural climatic variations or other stressors. The following sites, with noted periods of records, are examples of intensively studied forested watersheds in eastern USA supported by federal agencies: ■ Coweeta Hydrologic Laboratory, North Carolina, (1939-present), Swank and Crossley (1988). ■ Hubbard Brook Experimental Forest, New Hampshire, (1956-present), Bormann and Likens (1979). ■ Sleepers River Research Watershed, Vermont, (1958-present), Shanley et al. (1995). ■ Walker Branch Watershed, Tennessee, (1967-present), Johnson and Van Hook (1989). ■ Catoctin Mountains Research Site, Maryland, (1982-present), Rice and Bricker (1995). ■ Catskill Stream Network, New York, (1983- present), Murdoch and Stoddard (1992). ■ Panola Mountain Research Watershed, Georgia, (1985-present), Huntington et al. (1993). Small watershed studies also provide essential baseline information for understanding variations in water quality and element cycling in "pristine" ecosystems that can be used as benchmarks to evaluate anthropogenic impacts and alternate watershed management practices. This paper provides examples of how analytical tools developed through watershed research provide insight into ecosystem processes and can contribute to the management of watershed resources.

Conference Paper

Application of health-based screening levels to ground-water quality data in a state-scale pilot effort

A state-scale pilot effort was conducted to evaluate a Health-Based Screening Level (HBSL) approach developed for communicating findings from the U.S. Geological Survey (USGS) National Water-Quality Assessment Program in a human-health context. Many aquifers sampled by USGS are used as drinking-water sources, and water-quality conditions historically have been assessed by comparing measured contaminant concentrations to established drinking-water standards and guidelines. Because drinking-water standards and guidelines do not exist for many analyzed contaminants, HBSL values were developed collaboratively by the USGS, U.S. Environmental Protection Agency (USEPA), New Jersey Department of Environmental Protection, and Oregon Health & Science University, using USEPA toxicity values and USEPA Office of Water methodologies. The main objective of this report is to demonstrate the use of HBSL approach as a tool for communicating water-quality data in a human-health context by conducting a retrospective analysis of ground-water quality data from New Jersey. Another important objective is to provide guidance on the use and interpretation of HBSL values and other human-health benchmarks in the analyses of water-quality data in a human-health context. Ground-water samples collected during 1996-98 from 30 public-supply, 82 domestic, and 108 monitoring wells were analyzed for 97 pesticides and 85 volatile organic compounds (VOCs). The occurrence of individual pesticides and VOCs was evaluated in a human-health context by calculating Benchmark Quotients (BQs), defined as ratios of measured concentrations of regulated compounds (that is, compounds with Federal or state drinking-water standards) to Maximum Contaminant Level (MCL) values and ratios of measured concentrations of unregulated compounds to HBSL values. Contaminants were identified as being of potential human-health concern if maximum detected concentrations were within a factor of 10 of the associated MCL or HBSL (that is, maximum BQ value (BQmax) greater than or equal to 0.1) in any well type (public supply, domestic, monitoring). Most (57 of 77) pesticides and VOCs with human-health benchmarks were detected at concentrations well below these levels (BQmax less than 0.1) for all three well types; however, BQmax values ranged from 0.1 to 3,000 for 6 pesticides and 14 VOCs. Of these 20 contaminants, one pesticide (dieldrin) and three VOCs (1,2-dibromoethane, tetrachloroethylene, and trichloroethylene) both (1) were measured at concentrations that met or exceeded MCL or HBSL values, and (2) were detected in more than 10 percent of samples collected from raw ground water used as sources of drinking water (public-supply and (or) domestic wells) and, therefore, are particularly relevant to human health. The occurrence of multiple pesticides and VOCs in individual wells also was evaluated in a human-health context because at least 53 different contaminants were detected in each of the three well types. To assess the relative human-health importance of the occurrence of multiple contaminants in different wells, the BQ values for all contaminants in a given well were summed. The median ratio of the maximum BQ to the sum of all BQ values for each well ranged from 0.83 to 0.93 for all well types, indicating that the maximum BQ makes up the majority of the sum for most wells. Maximum and summed BQ values were statistically greater for individual public-supply wells than for individual domestic and monitoring wells. The HBSL approach is an effective tool for placing water-quality data in a human-health context. For 79 of the 182 compounds analyzed in this study, no USEPA drinking-water standards or guidelines exist, but new HBSL values were calculated for 39 of these 79 compounds. The new HBSL values increased the number of detected pesticides and VOCs with human-health benchmarks from 65 to 77 (of 97 detected compounds), thereby expanding the basis for interpreting contaminant-occu

Scientific Investigations Report

Vascular Plant and Vertebrate Inventory of Saguaro National Park, Rincon Mountain District

Executive Summary This report summarizes the results of the first comprehensive inventory of plants and vertebrates at the Rincon Mountain District (RMD) of Saguaro National Park, Arizona. From 2001 to 2003 we surveyed for vascular plants and vertebrates (amphibians, reptiles, birds, and mammals) at the district to document the presence of species within its boundaries. Park staff also surveyed for medium and large mammals using infrared-triggered cameras from 1999 to 2005. This report summarizes the methods and results of these two efforts. Our spatial sampling design was ambitious and was one of the first of its kind in the region to colocate study sites for vegetation and vertebrates using a stratified random design. We also chose the location of some study sites non-randomly in areas that we thought would have the highest species richness. Because we used repeatable study designs and standardized field methods, these inventories can serve as the first step in a biological monitoring program for the district. We also provide an important overview of most previous survey efforts in the district. We use data from our inventory and other surveys to compile species lists and to assess inventory completeness. With the exception of plants, our survey effort was the most comprehensive ever undertaken in the district. We recorded a total of 801 plant and vertebrate species, including 50 species not previously found in the district (Table 1) of which five (all plants) are non-native species. Based on a review of our inventory and past research at the district, there have been a total of 1,479 species of plants and vertebrates found there. We believe inventories for all taxonomic groups are nearly complete. In particular, the plant, amphibian and reptile, and mammal species lists are the most complete of any comparably large natural area of the 'sky island' region of southern Arizona and adjacent Mexico. For each taxon-specific chapter we discuss patterns of species richness and environmental determinants of these patterns. For all groups except medium and large mammals, the low elevation stratum (<4,000 feet) contained the highest species richness, after accounting for differences in survey effort among strata. This is consistent with known patterns of species richness in the sky island mountain ranges. Using data on relative abundance for plants and birds, we were able to identify a number of distinct ecological communities, which were consistent with known patterns in the sky islands. Our review of species lists and park records reveals that the district has lost species, particularly plants and mammals, in the past few decades. Because of the district's close proximity to the rapidly growing city of Tucson, there are a number of development-related threats that could cause additional species loss or decline in abundance of some species. In particular, the increasing groundwater pumping near Rincon Creek, the most species-rich area in the park, is likely to impact the unique riparian vegetation and animals of that area. We discuss this and other demands on the ecological integrity of the district. We also recommend additional inventory, monitoring, and research studies.

Open-File Report

Water quality in the central Columbia Plateau, Washington and Idaho, 1992-95

Water quality in the Central Columbia Plateau of eastern Washington and western Idaho has been adversely affected by agriculture, especially in irrigated areas, according to the results of a five-year investigation by the U. S. Geological Survey (USGS). Some improvements, however, are noticeable, such as less sediment being washed into streams. These improvements may be the result of increased use of best management practices (BMPs) by area farmers. Areas with intensive fertilizer use and irrigation, such as in the Columbia Basin Irrigation Project (CBIP), showed the greatest impacts on ground-water quality. (The CBIP includes parts of Franklin, Grant, and Adams counties in eastern Washington.) <Shallow wells, generally those less than 150 feet deep, are the most susceptible to contamination, the USGS report says. A reassuring aspect of this finding, however, is that many public water supplies draw from wells at greater depths and are less susceptible to contamination from agricultural practices. From the standpoint of human health, we were most concerned about checking for nitrate and pesticides in drinking water,' said Sandy Williamson, USGS hydrologist and chief of the study. 'We found nitrate levels exceeding the maximum contaminant level in about 20 percent of all wells.' (A maximum contaminant level-or MCL-is a drinking water regulatory standard that is set by the U.S. Environmental Protection Agency.) 'The story on pesticides is a mixed bag,' Williamson said. 'We found at least one pesticide in nearly half of the drinking water wells sampled, but pesticide levels were only a very small fraction of their MCLs.' As a cautionary note, however, Williamson said that about half of the pesticides detected in Central Columbia Plateau wells do not have MCLs established. A lack of information makes it difficult to assess the significance of finding pesticides in drinking water. 'As scientists, we don't know enough yet about what happens when these pesticides are combined,' he said. 'In some of the very shallow wells that the USGS installed for monitoring purposes, we found up to seven different pesticides.' Encouraging news is that none of the newer pesticides, which break down more rapidly in the environment, were found at concentrations exceeding MCLs. Compounds that exceed drinking water standards were found in only 1 percent of the wells sampled-and those compounds have not been sold as pesticides since the mid-1980s. However, agricultural impacts on water quality go beyond the concerns for drinking water-the aquatic ecosystem of the plateau also has been significantly affected. 'Very little surface water is used for drinking water in this area, but fish are harmed by decreased stream-water quality,' said Mark Munn, the biologist for the USGS study. 'Pesticides and habitat degradation are the main concerns.' He noted that stream sampling by the USGS showed seven currently used pesticides at concentrations above the limits recommended for protecting aquatic life. Soil erosion, a long-term problem for farmers in the Palouse River Basin, transports some soil to streams, degrading habitat and carrying with it older pesticides and their breakdown products. A breakdown product of the banned insecticide DDT was found in both streambed sediment and bottom fish at concentrations exceeding guidelines for the protection of aquatic life. 'Another problem for fish habitat is excessive plant growth caused by high levels of nutrients in streams,' said Munn, who explained that these nutrients enter streams in runoff from agricultural fields and discharge from urban wastewater treatment plants. Some agricultural practices, such as allowing cattle to graze near streams, are associated with higher rates of erosion. However, increased use of BMPs may improve water quality of the plateau. The USGS study showed that use of sprinkler or drip rather than furrow irrigation has decreased soil erosion in the CBIP area. In the Palouse, erosion

Circular

Synoptic analysis of a decade of daily measurements of SO2 emission in the troposphere from volcanoes of the global ground-based Network for Observation of Volcanic and Atmospheric Change

Volcanic plumes are common and far-reaching manifestations of volcanic activity during and between eruptions. Observations of the rate of emission and composition of volcanic plumes are essential to recognize and, in some cases, predict the state of volcanic activity. Measurements of the size and location of the plumes are important to assess the impact of the emission from sporadic or localized events to persistent or widespread processes of climatic and environmental importance. These observations provide information on volatile budgets on Earth, chemical evolution of magmas, and atmospheric circulation and dynamics. Space-based observations during the last decades have given us a global view of Earth's volcanic emission, particularly of sulfur dioxide ( SO 2 ). Although none of the satellite missions were intended to be used for measurement of volcanic gas emission, specially adapted algorithms have produced time-averaged global emission budgets. These have confirmed that tropospheric plumes, produced from persistent degassing of weak sources, dominate the total emission of volcanic SO 2 . Although space-based observations have provided this global insight into some aspects of Earth's volcanism, it still has important limitations. The magnitude and short-term variability of lower-atmosphere emissions, historically less accessible from space, remain largely uncertain. Operational monitoring of volcanic plumes, at scales relevant for adequate surveillance, has been facilitated through the use of ground-based scanning differential optical absorption spectrometer (ScanDOAS) instruments since the beginning of this century, largely due to the coordinated effort of the Network for Observation of Volcanic and Atmospheric Change (NOVAC). In this study, we present a compilation of results of homogenized post-analysis of measurements of SO 2 flux and plume parameters obtained during the period March 2005 to January 2017 of 32 volcanoes in NOVAC. This inventory opens a window into the short-term emission patterns of a diverse set of volcanoes in terms of magma composition, geographical location, magnitude of emission, and style of eruptive activity. We find that passive volcanic degassing is by no means a stationary process in time and that large sub-daily variability is observed in the flux of volcanic gases, which has implications for emission budgets produced using short-term, sporadic observations. The use of a standard evaluation method allows for intercomparison between different volcanoes and between ground- and space-based measurements of the same volcanoes. The emission of several weakly degassing volcanoes, undetected by satellites, is presented for the first time. We also compare our results with those reported in the literature, providing ranges of variability in emission not accessible in the past. The open-access data repository introduced in this article will enable further exploitation of this unique dataset, with a focus on volcanological research, risk assessment, satellite-sensor validation, and improved quantification of the prevalent tropospheric component of global volcanic emission.

Earth System Science Data

Water Quality and Algal Data for the North Umpqua River Basin, Oregon, 2005

The upper North Umpqua River Basin has experienced a variety of water-quality problems since at least the early 1990's. Several reaches of the North Umpqua River are listed as water-quality limited under section 303(d) of the Clean Water Act. Diamond Lake, a eutrophic lake that is an important source of water and nutrients to the upper North Umpqua River, is also listed as a water-quality limited waterbody (pH, nuisance algae). A draft Total Maximum Daily Load (TMDL) was proposed for various parameters and is expected to be adopted in full in 2006. Diamond Lake has supported potentially toxic blue-green algae blooms since 2001 that have resulted in closures to recreational water contact and impacts to the local economy. Increased populations of the invasive tui chub fish are reportedly responsible, because they feed on zooplankton that would otherwise control the algal blooms. The Final Environmental Impact Statement (FEIS) for the Diamond Lake Restoration Project advocates reduced fish biomass in Diamond Lake in 2006 as the preferred alternative. A restoration project scheduled to reduce fish biomass for the lake includes a significant water-level drawdown that began in January 2006. After the drawdown of Diamond Lake, the fish toxicant rotenone was applied to eradicate the tui chub. The lake will be refilled and restocked with game fish in 2007. Winter exports of nutrients from Diamond Lake during the restoration project could affect the summer trophic status of the North Umpqua River if retention and recycling in Lemolo Lake are significant. The FEIS includes comprehensive monitoring to assess the water quality of the restored Diamond Lake and the effects of that restoration downstream. One component of the monitoring is the collection of baseline data, in order to observe changes in the river's water quality and algal conditions resulting from the restoration of Diamond Lake. During July 2005, the USGS, in cooperation with Douglas County, performed a synoptic survey of water quality and algal conditions, the results of which can be used for comparison with post-restoration conditions in the river as well as with those documented in an earlier study in 1995. This report presents data from that survey.

Oregon

Ground-Water Conditions and Studies in Georgia, 2004-2005

The U.S. Geological Survey (USGS) collects ground-water data and conducts studies to monitor hydrologic conditions, better define ground-water resources, and address problems related to water supply, water use, and water quality. During 2004-2005, ground-water levels were monitored continuously in a network of 183 wells completed in major aquifers throughout the State. Because of missing data or the short period of record for a number of these wells (less than 3 years), a total of 171 wells from the network are discussed in this report. These wells include 19 in the surficial aquifer system, 20 in the Brunswick aquifer system and equivalent sediments, 69 in the Upper Floridan aquifer, 17 in the Lower Floridan aquifer and underlying units, 10 in the Claiborne aquifer, 1 in the Gordon aquifer, 10 in the Clayton aquifer, 12 in the Cretaceous aquifer system, 2 in Paleozoic-rock aquifers, and 11 in crystalline-rock aquifers. Data from the network indicate that generally water levels rose after the end of a drought (fall 2002), with water levels in 152 of the wells in the normal or above-normal range by 2005. An exception to this pattern of water-level recovery is in the Cretaceous aquifer system where water levels in 7 of the 12 wells monitored were below normal during 2005. In addition to continuous water-level data, periodic synoptic water-level measurements were collected and used to construct potentiometric-surface maps for the Upper Floridan aquifer in the Camden County-Charlton County area during September 2004 and May 2005, in the Brunswick area during June 2004 and June 2005, and in the City of Albany-Dougherty County area during October 2004 and during October 2005. In general, the configuration of the potentiometric surfaces showed little change during 2004-2005 in each of the areas. Ground-water quality in the Upper Floridan aquifer is monitored in the Albany, Savannah, and Brunswick areas, and in Camden County; and the Lower Floridan aquifer, monitored in the Savannah and Brunswick areas and in Camden County. In the Albany area, nitrate concentrations generally increased since the end of the drought during 2002. Concentrations increased in water collected from 13 of the 16 wells sampled during 2004-2005 and by November 2005, water from 2 wells had nitrate as N concentrations that were above the U.S. Environmental Protection Agency's (USEPA) 10-milligram-per-liter (mg/L) drinking-water standard. In the Savannah area, measurement of fluid conductivity and chloride concentration in water samples from discrete depths in three wells completed in the Upper Floridan aquifer and one well in the Lower Floridan aquifer were used to assess changes in water quality in the Savannah area. At Tybee Island, chloride concentrations in samples from the Lower Floridan aquifer increased during 2004-2005 and were above the 250-mg/L USEPA drinking-water standard. At Skidaway Island, water in the Upper Floridan aquifer is fresh, and chloride concentrations did not appreciably change during 2004-2005. However, chloride concentrations in samples collected from the Lower Floridan aquifer during 2004-2005 showed disparate changes; whereby, chloride concentration increased in the deepest sampled interval (1,070 feet) and decreased in a shallower sampled interval (900 feet). At Fort Pulaski, water samples collected from the Upper Floridan aquifer are fresh and did not appreciably change during 2004-2005. In the Brunswick area, maps showing the chloride concentration of water in the Upper Floridan aquifer were constructed using data collected from 41 wells during June 2004 and from 39 wells during June 2005. Analyses indicate that concentrations remained above the USEPA drinking-water standard in an approximate 2-square-mile area. During 2004-2005, chloride concentrations increased in samples from 18 wells and decreased in samples from 11 wells. In the Camden County area, chloride concentrations during 2004-2005 were analyzed in water

Georgia

Drought early warning and forecasting

Drought risk management involves three pillars: drought early warning, drought vulnerability and risk assessment, and drought preparedness, mitigation, and response. This book collects in one place a description of all the key components of the first pillar, and describes strategies for fitting these pieces together. The best modern drought early warning systems incorporate and integrate a broad array of environmental information sources: weather station observations, satellite imagery, land surface and crop model simulations, and weather and climate model forecasts, and analyze this information in context-relevant ways that take into account exposure and vulnerability. Drought Early Warning and Forecasting: Theory and Practice assembles a comprehensive overview of these components, providing examples drawn from the Famine Early Warning Systems Network and the United States Drought Monitor. This book simultaneously addresses the physical, social, and information management aspects of drought early warning, and informs readers about the tools, techniques, and conceptual models required to effectively identify, predict, and communicate potential drought-related disasters. This book is a key text for postgraduate scientists and graduate and advanced undergraduate students in hydrology, geography, earth sciences, meteorology, climatology, and environmental sciences programs. Professionals dealing with disaster management and drought forecasting will also find this book beneficial to their work.

Book

Monitoring of wild fish health at selected sites in the Great Lakes Basin: methods and preliminary results

During fall 2010 and spring 2011, a total of 119 brown bullhead ( Ameiurus nebulosus ), 136 white sucker ( Catostomus commersoni ), 73 smallmouth bass ( Micropterus dolomieu ), and 59 largemouth bass ( M. salmoides ) were collected from seven Great Lakes Basin Areas of Concern and one Reference Site. Comprehensive fish health assessments were conducted in order to document potential adverse affects from exposure to complex chemical mixtures. Fish were necropsied on site, blood samples obtained, pieces of liver, spleen, kidney, gill and any abnormalities placed in fixative for histopathology. Liver samples were saved for gene expression analysis and otoliths were removed for aging. A suite of fish health indicators was developed and implemented for site comparisons and to document seasonal effects and species differences in response to environmental conditions. Organism level (grossly visible lesions, condition factor), tissue level (microscopic pathology, organosomatic indices, micronuclei, and other nuclear abnormalities), plasma factors (reproductive steroid hormones, vitellogenin), and molecular (gene expression) indicators were included. This report describes the methods and preliminary results.

Great Lakes Basin

Water quality and hydrology of the Silver River Watershed, Baraga County, Michigan, 2005-08

The Silver River Watershed comprises about 69 square miles and drains part of northeastern Baraga County, Michigan. For generations, tribal members of the Keweenaw Bay Indian Community have hunted and fished in the watershed. Tribal government and members of Keweenaw Bay Indian Community are concerned about the effect of any development within the watershed, which is rural, isolated, and lightly populated. For decades, the area has been explored for various minerals. Since 2004, several mineral-exploration firms have been actively investigating areas within the watershed; property acquisition, road construction, and subsurface drilling have taken place close to tributary streams of the Silver River. The U.S. Geological Survey, in cooperation with Keweenaw Bay Indian Community, conducted a multi-year water-resources investigation of the Silver River Watershed during 2005-08. Methods of investigation included analyses of streamflow, water-quality sampling, and ecology at eight discrete sites located throughout the watershed. In addition, three continuous-record streamgages located within the watershed provided stage, discharge, specific conductance, and water-temperature data on an hourly basis. Water quality of the Silver River Watershed is typical of many streams in undeveloped areas of Upper Michigan. Concentrations of most analytes typically were low, although several exceeded applicable surface-water-quality standards. Seven samples had concentrations of copper that exceeded the Michigan Department of Environmental Quality standards for wildlife, and one sample had concentrations of cyanide that exceeded the same standards. Concentrations of total mercury at all eight sampling sites exceeded the Great Lakes Basin water-quality standard, but the ratio of methylmercury to total mercury was similar to the 5 to 10 percent found in most natural waters. Concentrations of arsenic and chromium in bed sediments were near the threshold-effect concentration. A qualitative ecological assessment of fishes and macroinvertebrates showed that intolerant salmonids were present at most sampled sites, and macroinvertebrate communities were indicative of near-excellent or excellent conditions at all eight sites. This baseline information will aid in an ongoing monitoring effort designed to protect the water resources of the

Scientific Investigations Report

Quality of shallow ground water in alluvial aquifers of the Willamette Basin, Oregon, 1993-95

The current (1993?95) quality of shallow ground water (generally, <25 meters below land surface) in Willamette Basin alluvium is described using results from two studies. A Study-Unit Survey, or regional assessment of shallow groundwater quality in alluvium, was done from June through August 1993. During the Study-Unit Survey, data were collected from 70 domestic wells chosen using a random-selection process and located mostly in areas of agricultural land use. An urban Land-Use Study, which was a reconnaissance of shallow urban ground-water quality from 10 monitoring wells installed in areas of residential land use, was done in July 1995. Concentrations of nitrite plus nitrate (henceforth, nitrate, because nitrite concentrations were low) ranged from <0.05 to 26 mg N/L (milligrams nitrogen per liter) in ground water from 70 Study-Unit-Survey wells; concentrations exceeded the U.S. Environmental Protection Agency (USEPA) Maximum Contaminant Level (MCL) of 10 mg N/L in 9 percent of Study-Unit-Survey samples. Relationships were observed between nitrate concentrations and dissolved-oxygen concentrations, the amount of clay present within and overlying aquifers, overlying geology, and upgradient land use. Tritium (3H) data indicate that 21 percent of Study-Unit-Survey samples represented water recharged prior to 1953. Nitrogen-fertilizer application rates in the basin have increased greatly over the past several decades. Thus, some observed nitrate concentrations may reflect nitrogen loading rates that were smaller than those presently applied in the basin. Concentrations of phosphorus ranged from <0.01 to 2.2 mg/L in 70 Study-Unit-Survey wells and exceeded 0.10 mg/L in 60 percent of the samples. Phosphorus and nitrate concentrations were inversely correlated. From 1 to 5 pesticides and pesticide degradation products (henceforth, pesticides) were detected in ground water from each of 23 Study-Unit-Survey wells (33 percent of 69 wells sampled for pesticides) for a total of 51 pesticide detections. Thirteen different pesticides were detected; atrazine was the most frequently encountered pesticide. Although detections were widespread, concentrations were low (generally <1,000 ng/L [nanograms per liter]). (One ng/L is equal to 0.001 mg/L [micrograms per liter].) One detection (dinoseb, at 7,900 ng/L) exceeded a USEPA MCL. Relationships were observed between the occurrence of pesticides and the amount of clay present within and overlying aquifers, overlying geology, and land use. Between 1 and 5 volatile organic compounds (VOCs) were detected at each of 7 Study-Unit-Survey sites (11 percent of 65 sites evaluated), for a total of 14 VOC detections. One detection (tetrachloroethylene, at 29 mg/L) exceeded a USEPA MCL. Other detections were at low concentrations (0.2 to 2.0 mg/L). VOC detections generally were from sites associated with urban land use. Concentrations of arsenic ranged from <1 to 13 mg/L in 70 Study-Unit-Survey wells. Concentrations in 16 percent of samples exceeded the USEPA Risk-Specific-Dose Health Advisory of 2 mg/L. Radon concentrations ranged from 200 to 1,200 pCi/L (picocuries per liter) in 51 Study-Unit-Survey wells. All samples exceeded the USEPA Risk-Specific-Dose Health Advisory of 150 pCi/L. All urban Land-Use-Study samples were well oxygenated; thus, nitrate reduction probably did not affect these samples. Urban Land-Use-Study nitrate concentrations were similar to those of the well oxygenated, agricultural subset of Study-Unit-Survey samples. Pesticides were detected in samples from three urban Land-Use-Study sites, but concentrations were low (1 to 5 ng/L). In contrast, VOCs were detected in ground water from 80 percent of urban Land-Use-Study wells; concentrations ranged up to 7.6 mg/L. Trace-element concentrations in the urban Land-Use Study samples were low. Median concentrations consistently were <10 mg/L and frequently were <1 mg/L

Water-Resources Investigations Report

Monitoring chemical contaminants in the Gulf of Maine, using sediments and mussels (Mytilus edulis): An evaluation

The objective of this paper is to determine whether contaminant data on mussels and sediments can be used interchangeably, or not, when assessing the degree of anthropogenic contamination of a water body. To obtain adequate coverage of the entire Gulf of Maine, Bay of Fundy sediment samples were collected, analyzed and combined with similar data from four coastal monitoring programs. This required careful interpretation but provided robust results consistent with published literature. A strong correspondence was found between sediment and mussel concentrations for polycyclic aromatic hydrocarbons, moderate to weak correspondence for polychlorinated biphenyls, and except for mercury and zinc, little to no correspondence was found for metals. We conclude that mussel contaminant data are likely sufficient for providing information on the spatial and temporal distribution of chemical contaminants, in coastal waters, under a broad range of environmental conditions and contaminant levels, and unlike sediments, provide direct information on contaminant bioavailability.

Gulf of Maine

Suwannee river basin and estuary integrated science workshop: September 22-24, 2004 Cedar Key, Florida

In response to the growing number of environmental concerns in the mostly pristine Suwannee River Basin and the Suwannee River Estuary system, the States of Florida and Georgia, the Federal government, and other local organizations have identified the Suwannee River as an ecosystem in need of protection because of its unique biota and important water resources. Organizations with vested interests in the region formed a coalition, the Suwannee Basin Interagency Alliance (SBIA), whose goals are to promote coordination in the identification, management, and scientific knowledge of the natural resources in the basin and estuary. To date, an integrated assessment of the physical, biological, and water resources has not been completed. A holistic, multi-disciplinary approach is being pursued to address the research needs in the basin and estuary and to provide supportive data for meeting management objectives of the entire ecosystem. The USGS is well situated to focus on the larger concerns of the basin and estuary by addressing specific research questions linking water supply and quality to ecosystem function and health across county and state boundaries. A strategic plan is being prepared in cooperation with Federal, State, and local agencies to identify and implement studies to address the most compelling research issues and management questions, and to conduct fundamental environmental monitoring studies. The USGS, Suwannee River Water Management District and the Florida Marine Research Institute are co-sponsoring this scientific workshop on the Suwannee River Basin and Estuary to: Discuss current and past research findings, Identify information gaps and research priorities, and Develop an action plan for coordinated and relevant research activities in the future. This workshop builds on the highly successful basin-wide conference sponsored by the Suwannee Basin Interagency Alliance that was held three years ago in Live Oak, Florida. This years workshop will focus on identifying information needs and priorities and developing partnerships. The USGS is seeking to define the role of the USGS Florida Integrated Science Center (FISC) in conducting integrated research in the Suwannee River Basin, and to establish a cooperative program with other agencies. Participants interested in river, floodplain, springs, estuary, or basin-wide issues are encouraged to attend. Topics for this years workshop include: Water quality and geochemistry: nutrient enrichment, reduction of nutrient loading to ground water, contaminants, and land use, Hydrogeology: interactions among ground water, surface water and ecosystem, modeling, and baseline mapping, Ecosystem dynamics: structure, process, species, and habitats (estuarine, riverine, floodplain, and wetland), and Information management: data sharing, database development, geographic information system (GIS), and basin-wide models.

Open-File Report

Rainfall, discharge, and water-quality data during stormwater monitoring, July 1, 2008, to June 30, 2009; Halawa Stream drainage basin and the H-1 storm drain, Oahu, Hawaii

Storm runoff water-quality samples were collected as part of the State of Hawaii Department of Transportation Stormwater Monitoring Program. The program is designed to assess the effects of highway runoff and urban runoff on Halawa Stream, and to assess the effects from the H-1 storm drain on Manoa Stream. For this program, rainfall data were collected at three stations, continuous discharge data at five stations, and water-quality data at six stations, which include the five continuous discharge stations. This report summarizes rainfall, discharge, and water-quality data collected between July 1, 2008, and June 30, 2009. Within the Halawa Stream drainage area, three storms (October 25 and December 11, 2008, and February 3, 2009) were sampled during July 1, 2008, to June 30, 2009. A total of 43 environmental samples were collected during these three storms. During the storm of October 25, 2009, 31 samples were collected and analyzed individually for metals only. The other 12 samples from the other two storms were analyzed for some or all of the following analytes: total suspended solids, total dissolved solids, nutrients, chemical oxygen demand, and selected trace metals (cadmium, chromium, copper, lead, and zinc). Additionally, grab samples were analyzed for some or all of the following analytes: oil and grease, total petroleum hydrocarbons, fecal coliform, and biological oxygen demand. Some grab and composite samples were analyzed for only a partial list of these analytes, either because samples could not be delivered to the laboratory in a timely manner, or an insufficient volume of sample was collected by the automatic samplers. Two quality-assurance/quality-control samples were collected after cleaning automatic sampler lines to verify that the sampling lines were not contaminated. Four environmental samples were collected at the H-1 Storm Drain during July 1, 2008, to June 30, 2009. An oil and grease sample and a composite sample were collected during the storm on November 15, 2008, and two composite samples were collected during the January 11, 2009, storm. All samples at this site were collected using an automatic sampler. Samples were analyzed for some or all of the following analytes: total suspended solids, nutrients, oil and grease, total petroleum hydrocarbons, and selected trace metals (cadmium, chromium, copper, lead, nickel, and zinc). One qualityassurance/quality-control sample was collected after cleaning automatic sampler lines to verify that the sampling lines were not contaminated. During the storm of January 11, 2009, the two composite samples collected at H-1 Storm Drain were collected about three hours apart. Higher constituent concentrations were detected in the first 2 composite sample relative to the second composite sample, although the average discharge was higher during the period when the second sample was collected.

Hawaii

Modeling potential impacts of the Garrison Diversion Unit project on Sand Lake and Arrowwood National Wildlife Refuges: a feasibility analysis

The Garrison Diversion Unit (GDU) of the Pick-Sloan Missouri Basin program was authorized in 1965, with the purpose of diverting Missouri River water to the James River for irrigation, municipal and industrial water supply, fish and wildlife habitat, recreation, and flood control. The project was reauthorized in 1986, with the specification that comprehensive studies be conducted to address a variety of issues. One of these ongoing studies addresses potential impacts of GDU construction and operation on lands of the National Wildlife Refuge (NWR) system, including Arrowwood and Sand Lake Refuges (the Refuges) on the James River. A number of concerns at these Refuges have been identified; the primary concerns addressed in this report include increased winter return flows, which would limit control of rough fish; increased turbidity during project construction, which would decrease production of sago pondweed; and increased water level fluctuations in the late spring and early summer, which would destroy the nests of some over-water nesting birds. The facilitated workshop described in this report was conducted February 18-20, 1987, under the joint sponsorship of the U.S. Bureau of Reclamation, the U.S. Fish and Wildlife Service, and the North Dakota Game and Fish Department. The primary objectives of the workshop were to evaluate the feasibility of using simulation modeling techniques to estimate GDU impacts on Arrowwood and Sand Lake Refuges and to suggest enhancements to the James River Refuge monitoring program. The workshop was structured around the formulation of four submodels: a Hydrology and Water Quality submodel to simulate changes in Refuge pool elevations, turnover rates, and water quality parameters (e.g., total dissolved solids, turbidity, dissolved oxygen, nutrients, water temperature, pesticides) due to GDU construction and operation; a Vegetation submodel to simulate concomitant changes in wetland communities (e.g., sago pondweed, wet meadows, deep and shallow marsh); a Fish submodel to estimate changes in abundance or biomass of rough fish (carp, buffalo) and sportfish (northern pike); and a Wildlife submodel to calculate indices of waterfowl abundance or habitat suitability (e.g., for mallards, western grebes, migrating diving ducks, white-faced ibis, egrets, over-water nesters). Submodels considered weekly to monthly changes in pools within a Refuge over a time horizon of 30-50 years. Based on workshop discussions and past experience with impact analysis modeling, a phased modeling approach was recommended for the James River Refuges analysis. The first phase would involve two modeling efforts. The existing Sand Lake hydrology model, and a similar one developed for Arrowwood NWR, would be validated and used to predict changes on pool elevations and winter inflows to each pool for a variety of GDU alternatives. Outputs from simulations would then be evaluated in terms of potential fish and wildlife impacts. For example, the models could generate indices comparing the magnitude and timing of winter inflows for pre- and postproject conditions; fisheries biologists could then use these indices to better quantify their concerns relative to potential changes in the frequency of rough-fish control. The other modeling effort in the first phase would involve developing a sago pondweed growth model to integrate Refuge monitoring data and existing literature and perhaps to address some questions concerning turbidity impacts. A second phase of simulation modeling would be undertaken only if the initial analyses of hydrologic outputs indicated significant potential problems and if monitoring and research projects had clarified some of the biological and physical processes that cannot be modeled reliably at the present time (e.g., resuspension of sediments by carp, immigration and winter mortality of fish, loss of waterfowl nests due to wave action). The second phase would attempt to develop an integrated impact assessment model. In order to address some of the biological and physical processes that presently are not well understood, a number of studies and enhancements to the Refuge monitoring program were suggested. The Hydrology and Water Quality workgroup recommended increasing turbidity and dissolved oxygen sampling, dropping expensive analysis of some trace elements, adding more pesticide analysis (including some biological monitoring), and developing better area-capacity data for the Sand Lake hydrology model. The Vegetation workgroup suggested expanding the number of monitoring stations, monitoring photosynthetically active radiation by depth, and modifying the biomass sampling procedure and schedule. Also suggested were additional analyses of existing Refuge monitoring data and additional field studies concerning sago growth under a variety of environmental conditions and effects of rough fish density on sago. A careful examination of Refuge narrative reports was recommended by the Fish workgroup to characterize conditions that led to various rates of winter-kill. Monitoring enhancement related to a better understanding of fish population dynamics included increasing dissolved oxygen monitoring, continuing present monitoring of fish movement upstream from Jamestown Reservoir into Arrowwood NWR, initiating similar efforts for upstream movement into Sand Lake NWR and downstream movements into both Refuges, and augmenting the present gillnetting program (or replacing it) with sampling for population and age/size structure estimates. The Wildlife workgroup suggested estimating the relative density of mallard nests in over-water and wet meadow nesting areas, estimating the number of western grebe nests lost due to wave action, delineating wet meadows on the Refuge vegetation maps, estimating annual tuber consumption by birds, and monitoring insect/macroinvertebrate abundance. The workgroup also suggested research studies to better understand the relationships between food supplies and the growth and survival of ducklings and young grebes. the workshop discussions also helped identify some suggestions for modifying project features that, if feasible from an engineering and operational standpoint, would reduce impacts on Refuge lands. These suggestions included: designing drains with control structures or small "reregulation" reservoirs to hold winter return flows that might adversely affect rough fish control, spreading construction activities over a number of years to reduce potential impacts of turbidity on sago pondweed in any single year, scheduling construction to occur after the spring sprouting and elongation growth stages to reduce impacts on sago pondweed, and installing "quick acting" control structures at Arrowwood NWR to reduce pool level fluctuations that might destroy nests of some over-water nesting waterfowl.

Report

Surface-water-quality assessment of the upper Illinois River Basin in Illinois, Indiana, and Wisconsin– Results of investigations through April 1992

A water-quality assessment of the upper Illinois River Basin (10,949 square miles) was conducted during water years 1987-91. This assessment involved interpretation of available data; 4 years of intensive data collection, including monthly sample collection at eight fixed-monitoring stations in the basin; and synoptic studies of selected water-quality constituents at many sites. The number of exceedances of water-quality criteria for chromium, copper, lead, mercury, silver, and zinc in water was essentially the same at similar stations between 1978-86 and 1987-90. For water and sediment, a large signature for many trace inorganic constituents was observed from the Chicago metropolitan area, mainly from the Des Plaines River Basin and continuing down the Illinois River. Loads of trace inorganic constituents in water were 2-13 times greater from the Chicago metropolitan area than from rural areas in the upper Illinois River Basin. Concentrations of cadmium, mercury, nickel, selenium, and zinc appeared to be relatively enriched in biota in the upper Illinois River Basin compared to other river basins. Biota from some urban sites were enriched with respect to several elements. For example, relatively large concentrations of cadmium, chromium, copper, lead, and nickel were observed in biota from sites in the Chicago River in the metropolitan area and the Calumet River. Results of pesticide sampling in 1988 and 1989 identified the pesticides bromacil, diazinon, malathion, prometon, and simazine as urban related and alachlor, atrazine, cyanazine, metolachlor, and metribuzin as agricultural related. Phenol concentrations never exceeded general-use and secondary-contact water-quality standards of 100 and 300 micrograms per liter, respectively. Pentachlorophenol concentrations observed at the Illinois River at Marseilles, Ill., between 1981 and 1992 decreased beginning in 1987. A breakdown product of the organochlorine pesticide dichloro-diphenyl-trichloroethane (DDT), p,p'-DDE was the most commonly detected organic compound in biota in both 1989 and 1990. In the nine fish-fillet samples collected in 1989, exceedances of U.S. Environmental Protection Agency (USEPA) fish tissue concentrations were noted for p,p'-DDE in all nine fillets and for dieldrin in five of the nine fillets. Nutrient concentrations in water in the study area generally were larger than concentrations typically found in natural waters. The Des Plaines River Basin contributed approximately 41 percent of the total nitrogen load to the upper Illinois River Basin, whereas the Kankakee River and Iroquois River Basins contributed about 34 and 14 percent of the total load, respectively. Dissolved-oxygen concentrations measured during a 1988 synoptic sampling exceeded State water-quality standards at 76 percent of the sampled sites. Bacteria densities greater than water-quality standards were observed at all of the fixed-monitoring stations, but densities greater than water-quality criteria and standards were observed more often at stations in the Des Plaines River Basin. Results from the analysis of changes in water quality following changes in wastewater-treatment practices indicated that current monitoring programs, although sufficient for their intended purposes, are not suitable for this type of retrospective assessment in large-scale water-quality assessments. Changes were not indicated in fish-community structure and population following changes in wastewater-treatment practices. A strong relation between the quality of the fish community and overall water-quality conditions was observed, although USEPA acute criteria for the protection of freshwater aquatic life were rarely exceeded. Analyses of fish-community data clearly showed that water quality in the urbanized parts of the study area were degraded relative to those in agricultural areas. Total chromium in streambed sediments and total recoverable sodium in water were highly correlated

Illinois, Indiana, Wisconsin