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At least 793 records · Page 44Linked to original sources
USGS2019

Identifying common decision problem elements for the management of emerging fungal diseases of wildlife

Emerging infectious diseases (EIDs) of wildlife have characteristics that make them difficult to manage, leading to reactive and often ineffective management strategies. Currently, two fungal pathogens, Pseudogymnoascus destructans (Pd) and Batrachochytrium salamandrivorans (Bsal), are causing declines in novel host species. To improve the application of management strategies addressing the risk of these pathogens to North American wildlife, we queried wildlife managers about their concerns regarding managing populations of bats and amphibians potentially impacted by Pd and Bsal. Using these responses, we identified aspects of each decision problem that were shared across pathogens, regions and agencies – and found similarities in decision-problem elements for disease management. Reframing management problems as decisions can enable managers to identify similarities across EIDs, i.e. uncertainties within management actions, and improve reactive responses if proactive management is not possible. Such an approach recognizes context-specific constraints and identifies relevant uncertainties that must be reduced in developing a response.

Society and Natural Resources↗
USGS2020

Coseismic and post-seismic gravity disturbance induced by seismic sources using a 2.5-D spectral element method

I present a prescription for computing free-air coseismic and post-seismic gravity changes induced by seismic sources in a viscoelastic earth model. I assume a spherical earth geometry and a 2.5-D calculation, that is, 3-D motions that satisfy the equations of quasi-static equilibrium on a 2-D viscoelastic structure. The prescription permits application to regional gravity computations where a 2-D structure adequately represents the structural heterogeneity. I use a hybrid approach where deformation is computed on a discretized domain and the resulting density perturbations are expanded with spherical harmonics to produce the free-air gravity field. Starting with a solution to the equations of quasi-static displacements in the Laplace transform domain for a given dislocation source, I solve Poisson’s equation using Lagrangian interpolation on spectral element nodes to compute the required deformation quantities that contribute to free-air gravity. A numerical inverse Laplace transform then yields time domain results. This methodology is tested with analytic solutions on a spherically stratified viscoelastic structure, then applied to evaluate the effect of a descending slab of relatively high viscosity on post-seismic gravity in a megathrust faulting setting.

Geophysical Journal International↗
USGS2018

Do life history traits influence patterns of maternal immune elements in New World blackbirds (Icteridae)?

Avian immunology developed originally by investigating domesticated poultry species (Galliformes), but in recent decades eco-immunological studies of wild bird species have revealed that avian immune systems are more diverse than initially assumed. This study compares six immunological elements in eggs of six species within the same family, the New World blackbirds (Icteridae),whose members differ most notably in two life history parameters, brood parasitism and body size. We measured the maternal immune investment of passive immune components in both yolk and albumen: lysozyme, ovotransferrin, and immunoglobulins (Igs), and LPS-specific Igs. We predicted that brood parasites would have higher levels of immune activity for both innate and adaptive immunity compared with non-brood parasites, and that increased body size could increase microbial exposure of larger animals, resulting in an increase in some adaptive immune responses, such as LPS-specific Igs. We found that brood parasites had significantly higher levels of Igs and lysozyme levels in albumen, but significantly lower levels of Igs in yolk compared with non-brood parasites. Igs in yolk scaled according to body size, with the smallest organisms (the brood parasites) having the lowest levels, and the largest organism (common grackle) having the highest. Our results confirm the findings of other studies of comparative immunity among species in a single taxon that (1) similarities in immune investment cannot be assumed among closely related species and (2) single measures of immune defense cannot be assumed to be indicators of a species’ overall immune strategy, as life history traits can differentially affect immune responses.

North Dakota, Puerto Rico, South Dakota↗
USGS1994

Rare earth element evidence for the petrogenesis of the banded series of the Stillwater Complex, Montana, and its anorthosites

A rare earth element (REE) study was made by isotope-dilution mass spectrometry of plagioclase separates from a variety of cumulates stratigraphically spanning the Banded series of the Stillwater Complex, Montana. Evaluation of parent liquid REE patterns, calculated on the basis of published plagioclase-liquid partition coefficients, shows that the range of REE ratios is too large to be attributable to fractionation of a single magma type. At least two different parental melts were present throughout the Banded series. This finding supports hypotheses of previous workers that the Stillwater Complex formed from two different parent magma types, designated the anorthositic- or A-type liquid and the ultramafic- or U-type liquid. On the basis of our data, one melt has a REE pattern with a distinctive shallow slope and is represented by samples from the thick, massive Anorthosite zones I and II (AN I and AN II) of the Middle Banded series. Although samples from AN I and AN II are separated by as much as 1400 m stratigraphically, they have remarkably similar calculated parent liquid characteristics, with (Ce/Sm)n = 1.7–1.9, (Nd/Sm)n = 1.3–1.4 and (Ce/Yb)n = 2.9–4.6 (where n denotes chondrite-normalized). These calculated liquids are probably close to representing A-type magma. In addition, plagioclase-bronzite cumulates from Norite zones I and II (N I and N II), although thought to be U-type cumulates, contain plagioclase that has A-type REE characteristics, implying that A-type magmas were injected into the magma chamber during formation of those zones. In contrast, calculated parent liquids of cumulus augite-bearing rocks have REE patterns that display distinctly steeper slopes than the A-type REE pattern. The extreme is the calculated parent liquid of a plagioclase-bronzite-augite cumulated with (Ce/Sm)n = 2.9, (Nd/Sm)n = 1.7, and (Ce/Yb)n = 10.1.

Journal of Petrology↗
USGS2007

Spectral element modelling of fault-plane reflections arising from fluid pressure distributions

The presence of fault-plane reflections in seismic images, besides indicating the locations of faults, offers a possible source of information on the properties of these poorly understood zones. To better understand the physical mechanism giving rise to fault-plane reflections in compacting sedimentary basins, we numerically model the full elastic wavefield via the spectral element method (SEM) for several different fault models. Using well log data from the South Eugene Island field, offshore Louisiana, we derive empirical relationships between the elastic parameters (e.g. P-wave velocity and density) and the effective-stress along both normal compaction and unloading paths. These empirical relationships guide the numerical modelling and allow the investigation of how differences in fluid pressure modify the elastic wavefield. We choose to simulate the elastic wave equation via SEM since irregular model geometries can be accommodated and slip boundary conditions at an interface, such as a fault or fracture, are implemented naturally. The method we employ for including a slip interface retains the desirable qualities of SEM in that it is explicit in time and, therefore, does not require the inversion of a large matrix. We performa complete numerical study by forward modelling seismic shot gathers over a faulted earth model using SEM followed by seismic processing of the simulated data. With this procedure, we construct post-stack time-migrated images of the kind that are routinely interpreted in the seismic exploration industry. We dip filter the seismic images to highlight the fault-plane reflections prior to making amplitude maps along the fault plane. With these amplitude maps, we compare the reflectivity from the different fault models to diagnose which physical mechanism contributes most to observed fault reflectivity. To lend physical meaning to the properties of a locally weak fault zone characterized as a slip interface, we propose an equivalent-layer model under the assumption of weak scattering. This allows us to use the empirical relationships between density, velocity and effective stress from the South Eugene Island field to relate a slip interface to an amount of excess pore-pressure in a fault zone. ?? 2007 The Authors Journal compilation ?? 2007 RAS.

Geophysical Journal International↗
USGS2005

SVFlux and ChemFlux: Software for two-dimensional/three-dimensional finite element variably saturated flow and transport modeling

SVFlux and ChemFlux are a pair of finite element models designed to simulate the movement of water and contaminants in two and three dimensions under variably saturated conditions. The transport simulator ChemFlux is designed as a companion to the flow simulator SVFlux. SVFlux and ChemFlux are commercial products developed by SoilVision Systems Ltd. and can be purchased via the company's Web site. SVFlux and ChemFlux run under Microsoft Windows NT/2000/XP operating systems, and require a minimum of 128 MB RAM and approximately 150 MB hard drive space. The software includes Windows-based graphical user interface, numerical model engines, and post-processing programs. SVFlux and ChemFlux are suitable for numerous applications such as modeling of water and transport modeling in aquifers and the unsaturated zone, modeling of seepage across dams and geomembranes, and modeling of infiltration, excess pore water buildup, and dissipation. This article is based on two independent reviews of SVFlux (versions 4.05 and 5.04) and ChemFlux (versions 3.00 and 3.03).

Groundwater↗
USGS2005

Estimating recharge rates with analytic element models and parameter estimation

Quantifying the spatial and temporal distribution of recharge is usually a prerequisite for effective ground water flow modeling. In this study, an analytic element (AE) code (GFLOW) was used with a nonlinear parameter estimation code (UCODE) to quantify the spatial and temporal distribution of recharge using measured base flows as calibration targets. The ease and flexibility of AE model construction and evaluation make this approach well suited for recharge estimation. An AE flow model of an undeveloped watershed in northern Wisconsin was optimized to match median annual base flows at four stream gages for 1996 to 2000 to demonstrate the approach. Initial optimizations that assumed a constant distributed recharge rate provided good matches (within 5%) to most of the annual base flow estimates, but discrepancies of >12% at certain gages suggested that a single value of recharge for the entire watershed is inappropriate. Subsequent optimizations that allowed for spatially distributed recharge zones based on the distribution of vegetation types improved the fit and confirmed that vegetation can influence spatial recharge variability in this watershed. Temporally, the annual recharge values varied >2.5-fold between 1996 and 2000 during which there was an observed 1.7-fold difference in annual precipitation, underscoring the influence of nonclimatic factors on interannual recharge variability for regional flow modeling. The final recharge values compared favorably with more labor-intensive field measurements of recharge and results from studies, supporting the utility of using linked AE-parameter estimation codes for recharge estimation. Copyright ?? 2005 The Author(s).

Ground Water↗
USGS2010

A hybrid finite-difference and analytic element groundwater model

Regional finite-difference models tend to have large cell sizes, often on the order of 1–2 km on a side. Although the regional flow patterns in deeper formations may be adequately represented by such a model, the intricate surface water and groundwater interactions in the shallower layers are not. Several stream reaches and nearby wells may occur in a single cell, precluding any meaningful modeling of the surface water and groundwater interactions between the individual features. We propose to replace the upper MODFLOW layer or layers, in which the surface water and groundwater interactions occur, by an analytic element model (GFLOW) that does not employ a model grid; instead, it represents wells and surface waters directly by the use of point-sinks and line-sinks. For many practical cases it suffices to provide GFLOW with the vertical leakage rates calculated in the original coarse MODFLOW model in order to obtain a good representation of surface water and groundwater interactions. However, when the combined transmissivities in the deeper (MODFLOW) layers dominate, the accuracy of the GFLOW solution diminishes. For those cases, an iterative coupling procedure, whereby the leakages between the GFLOW and MODFLOW model are updated, appreciably improves the overall solution, albeit at considerable computational cost. The coupled GFLOW–MODFLOW model is applicable to relatively large areas, in many cases to the entire model domain, thus forming an attractive alternative to local grid refinement or inset models.

Groundwater↗
USGS2007

Elements in cottonwood trees as an indicator of ground water contaminated by landfill leachate

Ground water at the Norman Landfill Research Site is contaminated by a leachate plume emanating from a closed, unlined landfill formerly operated by the city of Norman, Oklahoma, Ground water contaminated by the leachate plume is known to be elevated in the concentration of many, organic and inorganic constituents. Specific conductance, alkalinity, chloride, dissolved organic carbon, boron, sodium, strontium, and deuterium in ground water are considered to be indicators of the leachate plume at this site. Leaf samples of broad-leafed cottonwood, Populus deltoides, were collected from 57 sites around the closed landfill. Cottonwood, a phreatophyte or “well plant,” functions as a & surrogate well and serves as a ground water quality sampler. The leaf samples were combusted to ash and analyzed by instrumental neutron activation for 35 elements and by prompt-gamma instrumental neutron activation, for boron. A monitoring well was located within a few meters of a sampled cottonwood tree at 15 of the 57 sites, and ground water samples were collected from these monitoring wells simultaneously with a leaf sample. The chemical analyses of the ground water and leaf samples from these 15 sites indicated that boron, bromine, sodium, and strontium concentrations in leaves were significantly correlated with leachate indicator constituents in ground water. A point-plot map of selected percentiles indicated high concentrations of boron, bromine, and sodium in leaf ash from sites downgradient of the most recent landfill and from older landfills nearby. Data from leaf analysis greatly extended the known areal extent of the leachate plume previously determined from a network of monitoring wells and geophysical surveys. This phytosgeochemical study provided a cost-effective method for assessing the extent of a leachate plume from an old landfill. Such a method may be useful as a preliminary sampling tool to guide the design of hydrogeochemical and geophysical studies.

Oklahoma↗
USGS2022

Mapping first to final uses for rare earth elements, globally and in the United States

Estimating the material flows of rare earth elements (REEs) is essential to understanding which industries are most vulnerable to potential REE supply disruptions which, in turn, may inform policy recommendations aimed at reducing the supply risk. However, the REEs are a group of mineral commodities characterized by highly uncertain estimates of supply and demand due to the REE market's complexity, opacity, and small size. In this study, a streamlined methodology was applied to map mineral commodity first-use to final-use applications and to estimate total requirements at the national level based on available industrial data for final-use finished goods. This analysis examines REEs both as a group and individually, showing that total US requirements are between 15% and 16.5% of world requirements for the year 2015, the latest year with the most complete information available. The findings shed light on US industrial capabilities by revealing the discrepancy between the types of REEs that go into US raw material consumption and those that are contained in embedded consumption. For instance, given the United States’ large oil refining industry, US raw material consumption of lanthanum is quite high. In contrast, US raw material consumption of neodymium is relatively low, whereas embedded demand is comparatively high. This reflects the lack of industrial capacity to process REE concentrates into magnet material combined with the US's high imports of products that contain rare earth permanent magnets.

Journal of Industrial Ecology↗
USGS1991

Use of longitudinal strain in identifying driving and resisting elements of landslides

Observations of deformation at the surfaces of landslides in Utah and Hawaii indicate that the upslope parts of the land-slides have stretched and the downslope parts have shortened parallel with the direction of movement. The maximum displacement of each landslide occurs in a relatively undeformed zone between the zones of shortening and stretching. The pattern of deformation at the surface of these landslides may be useful in analyzing their mechanics by helping to constrain the longitudinal forces in limit-equilibrium stability analysis. We used earth-pressure calculations to determine the range of possible longitudinal forces (per unit width) for active failure in the zone of stretching and for passive failure in the zone of shortening of one of the Hawaiian landslides. Longitudinal forces computed by stability analysis, assuming homogeneous strength, exceeded the possible forces in much of the upslope half of the landslide. Consequently, we assumed inhomogeneous strength and adjusted shear-strength parameters at each segment of the slip surface until the longitudinal forces computed by stability analysis agreed with those computed by earth-pressure theory, and the factor of safety approached unity. The distribution of longitudinal forces computed for inhomogeneous strength indicated that the boundary between driving and resisting elements of the landslide is near the thickest part of the slide, in agreement with a simple formula for the location of the boundary.

Geological Society of America Bulletin↗
USGS1995

Minor elements in Quaternary sediment from the Sea of Japan: A record of surface-water productivity and intermediate-water redox conditions

Sediment of Quaternary age from Oki Ridge (903 m depth) in the Sea of Japan (∼3500 m deep) records six episodes of high accumulation rates of Cd, Cr, Cu, Mo, Ni, U, V, and Zn. The high rates correspond to periods of sulfate reduction in the water column at the intermediate depth of Oki Ridge; the intervening low values correspond to periods of denitrification and oxygen respiration. The maxima have a period of 41 k.y., the youngest having an age of 1.10 Ma. The 41 k.y. cycle is similar to the cycle of δ 18 O values of open-ocean plankton of the same age. The similarity between the cycles of minor-element accumulation in Sea of Japan sediment and δ 18 O values of Atlantic Ocean foraminifera indicates that redox changes in the water column of the Sea of Japan during the Quaternary, forced by major shifts in water-column advection and minor shifts in photic-zone productivity, reflect global events.

Geological Society of America Bulletin↗
USGS1995

Proterozoic low-Ti iron-oxide deposits in New York and New Jersey: Relation to Fe-oxide (Cu-U-Au-rare earth element) deposits and tectonic implications

Low-Ti iron-oxide deposits in exposed Grenville-age rocks of New York and New Jersey belong to a distinct class of iron-oxide (Cu-U-Au–rare earth element [REE]) deposits that includes similar iron deposits in southeastern Missouri and the Kiruna district of Sweden, the giant Olympic Dam U-Cu-Au-Ag deposit (Australia), and the Bayan Obo REE-Nb deposit (China). Most of the New York–New Jersey deposits exhibit features consistent with a hydrothermal origin and define a regionally significant metallogenic event that provides important clues to the evolution of this part of the Grenville orogen. In the Adirondacks, the tectonic setting of these deposits is consistent with postorogenic uplift and extensive crustal melting at 1070–1050 Ma that was accompanied by late tectonic to posttectonic deposition of iron.

Geology↗
USGS2006

From wetlands to wet spots: Environmental tracking and the fate of carboniferous elements in early permian tropical fl oras

Diverse wetland vegetation flourished at the margins of the Midland Basin in north-central Texas during the Pennsylvanian Period. Extensive coastal swamps and an ever-wet, tropical climate supported lush growth of pteridosperm, marattialean fern, lycopsid, and calamite trees, and a wide array of ground cover and vines. As the Pennsylvanian passed into the Permian, the climate of the area became drier and more seasonal, the great swamps disappeared regionally, and aridity spread. The climatic inferences are based on changes in sedimentary patterns and paleosols as well as the general paleobotanical trends. The lithological patterns include a change from a diverse array of paleosols, including Histosols (ever-wet waterlogged soils), in the late Pennsylvanian to greatly diminished paleosol diversity with poorly developed Vertisols by the Early-Middle Permian transition. In addition, coal seams were present with wide areal distribution in the late Pennsylvanian whereas beds of evaporates were common by the end of the Early Permian. During this climatic transition, wetland plants were confi ned to shrinking "wet spots" found along permanent streams where the vegetation they constituted remained distinct if increasingly depauperate in terms of species richness. By Leonardian (late Early Permian) time, most of the landscape was dominated by plants adapted to seasonal drought and a deep water table. Wetland elements were reduced to scattered pockets, dominated primarily by weedy forms and riparian specialists tolerant of flooding and burial. By the Middle Permian, even these small wetland pockets had disappeared from the region. ?? 2006 Geological Society of America.

Special Paper of the Geological Society of America↗
USGS1990

Chapter 21: Neodymium, strontium, and trace-element evidence of crustal anatexis and magma mixing in the Idaho batholith

Variations in initial 143 Nd/ 144 Nd in Late Cretaceous plutonic rocks along the South Fork of the Clearwater River (SFCR) supplement results of Sr and O studies, which demonstrate large-scale mixing in magmas forming the western margin of the Idaho batholith. These marginal or border phases of the batholith span the terrane boundary between Proterozoic crust of North America and late Paleozoic-Mesozoic intraoceanic arc terranes (WSD terranes), delineated by the Western Idaho suture zone (or WISZ). ɛ Nd (t) values in Early Cretaceous and older, pre-accretionary plutons of the WSD range from +3 to +7.6, and average +5.7. Proterozoic orthogneisses and metasedimentary rocks range from -7.4 to -13.7 and -10.45 to -15.7, respectively. ɛ Nd (t) in Late Cretaceous plutons of the SFCR decreases abruptly from west to east near the WISZ, varying inversely with ɛSr (t) . Although Sr isotopic evidence (Fleck and Criss, 1985) is consistent with a binary mixing model, Sm-Nd results modify those conclusions, suggesting that SFCR plutons may be divided into three groups. Group 1 plutons occur in a narrow zone (<4 km width) along the suture zone (WISZ). These bodies probably represent at least three-component mixtures of very high-Sr, arc-type magmas, one or more Proterozoic crustal components that may include lower crust, and a high-Nb, high-Zr component. Group 2 plutons are characterized by high ɛSr (t) .and nearly constant, low ɛNd (t) . These bodies are thought to represent mixtures of deep-seated partial melts of two different Proterozoic lithospheric types, possibly representing upper and lower crust. Plutons belonging to Group 3 have ɛNd (t) .values <-14 and probably incorporated substantial amounts of Proterozoic metasedimentary rocks, but mixing components are poorly defined. Trace-element variations in SFCR rocks also reflect the arc terrane-continental crustal boundary as Nb, Zr, and Nd increase dramatically, whereas Sr, Rb/Nb, and Sm/Nd exhibit coincident decreases east of the WISZ. Modeling of these variations with the isotopic variations in Nd and Sr supports mixing, but precludes contamination-bulk-assimilation models. Correlated ɛNd, ɛSr, and δ 18 O within the SFCR favors mixing of crustal and subcrustal magmas rather than derivation of the melts entirely from subcontinental lithosphere.

Idaho↗
USGS2003

Domain decomposition for a mixed finite element method in three dimensions

We consider the solution of the discrete linear system resulting from a mixed finite element discretization applied to a second-order elliptic boundary value problem in three dimensions. Based on a decomposition of the velocity space, these equations can be reduced to a discrete elliptic problem by eliminating the pressure through the use of substructures of the domain. The practicality of the reduction relies on a local basis, presented here, for the divergence-free subspace of the velocity space. We consider additive and multiplicative domain decomposition methods for solving the reduced elliptic problem, and their uniform convergence is established.

SIAM Journal on Numerical Analysis↗
USGS1997

Ni, Cu, Au, and platinum-group element contents of sulphides associated with intraplate magmatism: A synthesis

The tectonic setting of intraplate magmas, typically a plume intersecting a rift, is ideal for the development of Ni – Cu – platinum-group element-bearing sulphides. The plume transports metal-rich magmas close to the mantle–crust boundary. The interaction of the rift and plume permits rapid transport of the magma into the crust, thus ensuring that no sulphides are lost from the magma en route to the crust. The rift may contain sediments which could provide the sulphur necessary to bring about sulphide saturation in the magmas. The plume provides large volumes of mafic magma; thus any sulphides that form can collect metals from a large volume of magma and consequently the sulphides will be metal rich. The large volume of magma provides sufficient heat to release large quantities of S from the crust, thus providing sufficient S to form a large sulphide deposit. The composition of the sulphides varies on a number of scales: ( i ) there is a variation between geographic areas, in which sulphides from the Noril'sk–Talnakh area are the richest in metals and those from the Muskox intrusion are poorest in metals; ( ii ) there is a variation between textural types of sulphides, in which disseminated sulphides are generally richer in metals than the associated massive and matrix sulphides; and ( iii ) the massive and matrix sulphides show a much wider range of compositions than the disseminated sulphides, and on the basis of their Ni/Cu ratio the massive and matrix sulphides can be divided into Cu rich and Fe rich. The Cu-rich sulphides are also enriched in Pt, Pd, and Au; in contrast, the Fe-rich sulphides are enriched in Fe, Os, Ir, Ru, and Rh. Nickel concentrations are similar in both. Differences in the composition between the sulphides from different areas may be attributed to a combination of differences in composition of the silicate magma from which the sulphides segregated and differences in the ratio of silicate to sulphide liquid ( R factors). The higher metal content of the disseminated sulphides relative to the massive and matrix sulphides may be due to the fact that the disseminated sulphides equilibrated with a larger volume of magma than massive and matrix sulphides. The difference in composition between the Cu- and Fe-rich sulphides may be the result of the fractional crystallization of monosulphide solid solution from a sulphide liquid, with the Cu-rich sulphides representing the liquid and the Fe-rich sulphides representing the cumulate.

Noril'sk–Talnakh area↗
USGS2009

Elemental signatures in otoliths of hatchery rainbow trout (Oncorhynchus mykiss): Distinctiveness and utility fo detecting origins and movement

Otolith chemistry in freshwater has considerable potential to reveal patterns of origin and movement, which would benefit traditional fisheries management and provide a valuable tool to curb the spread of invasive and illicitly stocked species. We evaluated the relationship between otolith and water chemistry for five markers (Ba/Ca, Mn/Ca, Sr/ Ca, Zn/Ca, and 87 Sr/ 86 Sr) in rainbow trout (Oncorhynchus mykiss) using the existing hatchery system in Colorado and Wyoming, USA, to provide controlled, seminatural conditions. Otolith Ba/Ca, Sr/Ca, and 87 Sr/ 86 Sr reflected ambient levels, whereas Mn/Ca and Zn/Ca did not. Using only the markers correlated with water chemistry, we classified fish to their hatchery of origin with up to 96% accuracy when element and isotope data were used together. Large changes in 87Sr/ Sr were evident in otolith transects, although subtler changes in Sr/Ca were also detectable. Our results suggest the relatively few otolith markers that reflect ambient chemistry can discriminate among locations and track movements well enough to provide valuable insight in a variety of applied contexts.

Canadian Journal of Fisheries and Aquatic Sciences↗