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USGS2024

Life on land needs fresh water (SDG 15)

Terrestrial ecosystems, such as forests, and the inland waters within them, such as bogs, floodplains, lakes, rivers, springs, and wetlands, are foundational for life on earth. They provide critical ecosystem services such as carbon storage and sequestration, clean water, primary production, pollination, soil fertility, and erosion control. The human footprint on terrestrial and freshwater ecosystems continues to expand, imposing pressures from deforestation, invasive species, climate change, overexploitation of species, and land conversion for agricultural production. The United Nations’ Sustainable Development Goal (SDG) 15 (Life on Land) aims to address these changes by promoting the protection, restoration, and sustainable use of terrestrial ecosystems globally. Freshwater ecosystem services and freshwater biological diversity are inherently part of, and critical to, achieving SDG 15; yet they remain absent from the goal and largely hidden within the targets and indicators. Here, we aim to highlight the role and importance of freshwater ecosystems in achieving SDG 15. We identify the six major themes of SDG 15 in which freshwater ecosystems have a preeminent role: (1) increasing protected areas, (2) sustainably managing forests, (3) reducing land degradation, (4) protecting threatened and trafficked species, (5) reducing invasive species, and (6) mobilizing resources. For each theme, we detail (a) freshwater connections to the topic, (b) key opportunities in addressing freshwater components, and (c) a relevant case study highlighting cobenefits for terrestrial ecosystems from actions targeting freshwater ecosystems. We conclude with opportunities for integrative terrestrial–aquatic monitoring, management, and policy actions. Ultimately, achieving the targets of SDG 15 requires recognition of terrestrial–aquatic interdependencies and prioritization of freshwater ecosystems and biodiversity.

Book chapter↗

USGS2016

Conservation of avian species

Health of humans, animals, plants, and ecosystems are intertwined. Disturbance tips the balance in favor of weedy species, vectors, and disease agents. Biodiversity is important to prevent imbalance in nature. However, more scholarship is needed, and there is still much more to study, understand, and manage than we currently know.

Book chapter↗

USGS2017

Balancing lake ecological condition and agriculture irrigation needs in the Mississippi Alluvial Valley

The Mississippi Alluvial Valley includes hundreds of floodplain lakes that support unique fish assemblages and high biodiversity. Irrigation practices in the valley have lowered the water table , increasing the cost of pumping water, and necessitating the use of floodplain lakes as a source of water for irrigation. This development has prompted the need to regulate water withdrawals to protect aquatic resources, but it is unknown how much water can be withdrawn from lakes before ecological integrity is compromised. To estimate withdrawal limits, we examined descriptors of lake water quality (i.e., total nitrogen, total phosphorus, turbidity, Secchi visibility, chlorophyll- a ) and fish assemblages (species richness, diversity, composition) relative to maximum depth in 59 floodplain lakes. Change-point regression analysis was applied to identify critical depths at which the relationships between depth and lake descriptors exhibited a rapid shift in slope, suggesting possible thresholds. All our water quality and fish assemblage descriptors showed rapid changes relative to depth near 1.2–2.0 m maximum depth. This threshold span may help inform regulatory decisions about water withdrawal limits. Alternatives to explain the triggers of the observed threshold span are considered.

Arkansas, Mississippi↗

USGS2021

The influence of floral resources and microclimate on pollinator visitation in an agro-ecosystem

As agriculture expands to meet the needs of a growing global population, natural ecosystems are threatened by deforestation and habitat fragmentation. Tropical agroforestry systems offer a sustainable alternative to traditional agriculture by providing food for production while also supporting biodiversity and ecosystem services. Previous studies have shown that these systems may even improve crop pollination, but the mechanisms of how these improvements occur are still poorly understood. Using coffee as a focal crop, we explored how microclimatic conditions affected nectar traits (sugar and caffeine concentration) important for pollinator visitation. We also studied how microclimate, floral traits, floral availability at the coffee plant level, availability of floral resources provided by other plant species in the agroecosystem (neighborhood floral availability), and the presence of other bees affected the amount of time bees spent foraging on coffee flowers and the proportion of coffee pollen carried on their bodies. We explored these factors using the two dominant coffee species farmed on Puerto Rico, Coffea canephora and C. arabica , under sun and shade management. We found that high nectar sugar concentration and temperature were important predictors of short floral visits (<15 seconds), while increased number of bees and open coffee flowers were important predictors of longer floral visits (16-180 seconds). High nectar caffeine concentration was an important predictor of longer visits on C. arabica flowers while the opposite was observed for C. canephora flowers. For both species, high coffee floral availability was the main predicting factor for the proportion of coffee pollen on the bees bodies. Surprisingly, neither neighborhood floral availability nor the type of coffee plantation (agroforest/shade or sun) were important predictors of bee visitation. These results suggest non-coffee flowering plants in coffee plantations were neither competitors nor facilitators of coffee plantes for pollinators. Additionally, most of the bees surveyed were carrying 80% pollen from one species ( C. arabica or C. canephora ), likely resulting in little heterospecific pollen deposition between Coffea and non-Coffea flowers. Shade trees in coffee plantations do not detract from pollinator visitation to coffee flowers, suggesting that the provision of multiple ecological and wildlife conservation benefits by shade trees is not in conflict with a growers ability to maximize the benefits of insect pollination on fruit production.

Adjuntas Lares,Las Marias, Maricao, Puerto Rico Ut↗

USGS2015

Responses to water depth and clipping of twenty−three plant species in an Indian monsoonal wetland

Responses of species to disturbances give insights into how species might respond to future wetland changes. In this study, species of monsoonal wetlands belonging to various functional types (graminoid and non−graminoid emergents, submersed aquatic, floating−leaved aquatic) varied in their growth responses to water depth and harvesting. We tested the effects of water depth (moist soil, flooded) and clipping (unclipped, and clipped) on the biomass and longevity of twenty−three dominant plant species of monsoonal wetlands in the Keoladeo National Park, India in a controlled experiment. With respect to total biomass and survival, six species responded positively to flooding and twelve species responded negatively to clipping. Responses to flooding and clipping, however, sometimes interacted. Individualistic responses of species to water levels and clipping regimes were apparent; species within a functional group did not always respond similarly. Therefore, detailed information on the individualistic responses of species may be needed to predict the vegetation composition of post−disturbance wetlands. In particular, as demands for fresh water increase around the world, studies of life history constraints and responses to hydrological changes will aid wetland managers in developing strategies to conserve biodiversity.

Keoladeo National Park↗

USGS2023

Genetic analysis of North American Phragmites australis guides management approaches

Phragmites australis subsp. australis is an invasive and ecologically detrimental plant in multiple regions of North America. Its co-occurrence with the native subspecies, and multiple instances of hybridization, has created the need to differentiate Phragmites subspecies or haplotypes so that management can be appropriately targeted to the invader. We compiled a review of current genetic discrimination methods among the three Phragmites subspecies inhabiting the United States and Canada, and discussed how each method can contribute to control of the introduced subspecies while preserving the two endemic subspecies. We also discussed various control tools and the implications of Phragmites genetics for implementation. The Phragmites subspecies endemic to North America have environmental or infrastructure significance (e.g., habitat sustainability, biodiversity, storm surge and erosion protection). Thus, faster and more accurate differentiation among the endemic and introduced subspecies is needed. Additionally, more in-depth genetic information on Phragmites subspecies could support better management decisions, as well as the development of improved control treatments. This review highlights technologies and approaches currently available for genetic identification, recently collected genomic, transcriptomic and proteomic information, and implications for biological control and herbicide treatments.

Aquatic Botany↗

USGS2005

Buffelgrass (Pennisetum ciliare) land conversion and productivity in the plains of Sonora, Mexico

Bufflelgrass ( Pennisetum ciliare syn. Cenchrus ciliaris ) is an African grass that has been widely introduced in subtropical arid regions of the world to improve rangelands for cattle production. However, it can have a negative effect on the diversity of native plant communities. Buffelgrass was introduced to Sonora, Mexico in the 1970s as a means to bolster the cattle industry. “Desmonte,” the process by which native desert vegetation is removed in preparation for buffelgrass seeding, alters the land surface such that buffelgrass plots are easily detectable from aerial and Landsat satellite images. We estimated the extent of conversion to buffelgrass in a 1,850,000 ha area centered on Hermosillo, from MSS and TM images from 1973, 1983, 1990 and 2000. We then compared the relative above-ground productivity of buffelgrass to native vegetation using Normalized Difference Vegetation Index values (NDVI) from Landsat and Moderate Resolution Imaging Spectrometer (MODIS) satellite sensor systems. Buffelgrass pastures have increased from just 7700 ha in 1973 to over 140,000 ha in 2000. Buffelgrass pastures now cover 8% of the land surface in the study area. Buffelgrass pastures have lower net primary productivity, estimated by MODIS NDVI values, than unconverted desert land. The desmonte process removes trees and shrubs, while the buffelgrass plantings are often sparse, leading to an apparent net loss in net primary production from land conversion. We recommend that the desmonte process be discontinued until its efficacy and safety for native ecosystems can be established, and that a comprehensive plan for preserving biodiversity while accomodating economic development be established for this region of the Sonoran Desert in Mexico.

Sonora↗

USGS2007

Second chance for the plains bison

Before European settlement the plains bison ( Bison bison bison ) numbered in the tens of millions across most of the temperate region of North America. Within the span of a few decades during the mid- to late-1800s its numbers were reduced by hunting and other factors to a few hundred. The plight of the plains bison led to one of the first major movements in North America to save an endangered species. A few individuals and the American Bison Society rescued the remaining animals. Attempts to hybridize cattle and bison when bison numbers were low resulted in extensive cattle gene introgression in bison. Today, though approximately 500,000 plains bison exist in North America, few are free of cattle gene introgression, 96% are subject to anthropogenic selection for commodity production, and only 4% are in herds managed primarily for conservation purposes. Small herd size, artificial selection, cattle-gene introgression, and other factors threaten the diversity and integrity of the bison genome. In addition, the bison is for all practical purposes ecologically extinct across its former range, with multiple consequences for grassland biodiversity. Urgent measures are needed to conserve the wild bison genome and to restore the ecological role of bison in grassland ecosystems. Socioeconomic trends in the Great Plains, combined with new information about bison conservation needs and new conservation initiatives by both the public and public sectors, have set the stage for significant progress in bison conservation over the next few years.

Biological Conservation↗

USGS2009

Using occupancy models of forest breeding birds to prioritize conservation planning

As urban development continues to encroach on the natural and rural landscape, land-use planners struggle to identify high priority conservation areas for protection. Although knowing where urban-sensitive species may be occurring on the landscape would facilitate conservation planning, research efforts are often not sufficiently designed to make quality predictions at unknown locations. Recent advances in occupancy modeling allow for more precise estimates of occupancy by accounting for differences in detectability. We applied these techniques to produce robust estimates of habitat occupancy for a subset of forest breeding birds, a group that has been shown to be sensitive to urbanization, in a rapidly urbanizing yet biological diverse region of New York State. We found that detection probability ranged widely across species, from 0.05 to 0.8. Our models suggest that detection probability declined with increasing forest fragmentation. We also found that the probability of occupancy of forest breeding birds is negatively influenced by increasing perimeter-area ratio of forest fragments and urbanization in the surrounding habitat matrix. We capitalized on our random sampling design to produce spatially explicit models that predict high priority conservation areas across the entire region, where interior-species were most likely to occur. Finally, we use our predictive maps to demonstrate how a strict sampling design coupled with occupancy modeling can be a valuable tool for prioritizing biodiversity conservation in land-use planning. ?? 2009 Elsevier Ltd.

Biological Conservation↗

USGS2010

Multi-species occurrence models to evaluate the effects of conservation and management actions

Conservation and management actions often have direct and indirect effects on a wide range of species. As such, it is important to evaluate the impacts that such actions may have on both target and non-target species within a region. Understanding how species richness and composition differ as a result of management treatments can help determine potential ecological consequences. Yet it is difficult to estimate richness because traditional sampling approaches detect species at variable rates and some species are never observed. We present a framework for assessing management actions on biodiversity using a multi-species hierarchical model that estimates individual species occurrences, while accounting for imperfect detection of species. Our model incorporates species-specific responses to management treatments and local vegetation characteristics and a hierarchical component that links species at a community-level. This allows for comprehensive inferences on the whole community or on assemblages of interest. Compared to traditional species models, occurrence estimates are improved for all species, even for those that are rarely observed, resulting in more precise estimates of species richness (including species that were unobserved during sampling). We demonstrate the utility of this approach for conservation through an analysis comparing bird communities in two geographically similar study areas: one in which white-tailed deer (Odocoileus virginianus) densities have been regulated through hunting and one in which deer densities have gone unregulated. Although our results indicate that species and assemblage richness were similar in the two study areas, point-level richness was significantly influenced by local vegetation characteristics, a result that would have been underestimated had we not accounted for variability in species detection.

Biological Conservation↗

USGS2013

The conservation status of the world’s reptiles

Effective and targeted conservation action requires detailed information about species, their distribution, systematics and ecology as well as the distribution of threat processes which affect them. Knowledge of reptilian diversity remains surprisingly disparate, and innovative means of gaining rapid insight into the status of reptiles are needed in order to highlight urgent conservation cases and inform environmental policy with appropriate biodiversity information in a timely manner. We present the first ever global analysis of extinction risk in reptiles, based on a random representative sample of 1500 species (16% of all currently known species). To our knowledge, our results provide the first analysis of the global conservation status and distribution patterns of reptiles and the threats affecting them, highlighting conservation priorities and knowledge gaps which need to be addressed urgently to ensure the continued survival of the world’s reptiles. Nearly one in five reptilian species are threatened with extinction, with another one in five species classed as Data Deficient. The proportion of threatened reptile species is highest in freshwater environments, tropical regions and on oceanic islands, while data deficiency was highest in tropical areas, such as Central Africa and Southeast Asia, and among fossorial reptiles. Our results emphasise the need for research attention to be focussed on tropical areas which are experiencing the most dramatic rates of habitat loss, on fossorial reptiles for which there is a chronic lack of data, and on certain taxa such as snakes for which extinction risk may currently be underestimated due to lack of population information. Conservation actions specifically need to mitigate the effects of human-induced habitat loss and harvesting, which are the predominant threats to reptiles.

Biological Conservation↗

USGS2014

Organizing phenological data resources to inform natural resource conservation

Changes in the timing of plant and animal life cycle events, in response to climate change, are already happening across the globe. The impacts of these changes may affect biodiversity via disruption to mutualisms, trophic mismatches, invasions and population declines. To understand the nature, causes and consequences of changed, varied or static phenologies, new data resources and tools are being developed across the globe. The USA National Phenology Network is developing a long-term, multi-taxa phenological database, together with a customizable infrastructure, to support conservation and management needs. We present current and potential applications of the infrastructure, across scales and user groups. The approaches described here are congruent with recent trends towards multi-agency, large-scale research and action.

Biological Conservation↗

USGS2014

Acceptability of residential development in a regional landscape: Potential effects on wildlife occupancy patterns

The conversion of natural lands to developed uses may pose the single greatest human threat to global terrestrial biodiversity. Continued human growth and development over the next century will further exacerbate these effects of habitat loss and fragmentation. Natural resource managers are tasked with managing wildlife as a public trust, yet often have little say in land use decisions. Generally speaking, decision makers could benefit from an understanding of what different regulations mean in terms of wildlife distribution. In a previous paper ( Bettigole et al., 2013 ), we surveyed town residents throughout Vermont to measure how respondents feel about a range of development levels within their town boundaries. We estimated the “social carrying capacity for development” – or SK d – for 251 towns in Vermont. SK d provides an estimate of the level of developed land cover classes that town residents deem “acceptable” within their town boundaries. In this paper, we design a framework for linking the town-specific SK d estimates with the wildlife distribution patterns for three wide-ranging mammalian species: American black bear ( Ursus americanus ), fisher ( Martes pennanti ), and bobcat ( Lynx rufus ). We simulated landscape conditions at SK d for each town in Vermont, and then used existing occupancy models for the three target species to spatially map and compare occupancy rates in the baseline year 2000 with occupancy rates at SK d . With nearly 90% of Vermont towns willing to increase developed landcover classes within town boundaries compared to baseline levels, significant state-wide changes in occupancy rates were predicted for all three focal species. Average occupancy rates declined by −15.9% and −3.1% for black bear and bobcats, respectively. Average occupancy rates for fisher increased by 9.0%. This study provides a method for linking development standards within a town with wildlife occurrence. Across towns, the methodology spatially identifies areas that may be at risk of future development, as well as identifying areas where wildlife distribution patterns may face future change as a result of increased human population growth and development.

Biological Conservation↗

USGS2014

The role of protected area wetlands in waterfowl habitat conservation: implications for protected area network design

The principal goal of protected area networks is biodiversity preservation, but efficacy of such networks is directly linked to animal movement within and outside area boundaries. We examined wetland selection patterns of mallards (Anas platyrhynchos) during non-breeding periods from 2010 to 2012 to evaluate the utility of protected areas to migratory waterfowl in North America. We tracked 33 adult females using global positioning system (GPS) satellite transmitters and implemented a use-availability resource selection design to examine mallard use of wetlands under varying degrees of protection. Specifically, we examined effects of proximities to National Wildlife Refuges, private land, state wildlife management areas, Wetland Reserve Program easements (WRP), and waterfowl sanctuaries on mallard wetland selection. In addition, we included landscape-level variables that measured areas of sanctuary and WRP within the surrounding landscape of each used and available wetland. We developed 8 wetland selection models according to season (autumn migration, winter, spring migration), hunting season (present, absent), and time period (diurnal, nocturnal). Model averaged parameter estimates indicated wetland selection patterns varied across seasons and time periods, but ducks consistently selected wetlands with greater areas of sanctuary and WRP in the surrounding landscape. Consequently, WRP has the potential to supplement protected area networks in the midcontinent region. Additionally, seasonal variation in wetland selection patterns indicated considering the effects of habitat management and anthropogenic disturbances on migratory waterfowl during the non-breeding period is essential in designing protected area networks.

Biological Conservation↗

USGS2015

Moving environmental DNA methods from concept to practice for monitoring aquatic macroorganisms

The discovery that macroorganisms can be detected from their environmental DNA (eDNA) in aquatic systems has immense potential for the conservation of biological diversity. This special issue contains 11 papers that review and advance the field of eDNA detection of vertebrates and other macroorganisms, including studies of eDNA production, transport, and degradation; sample collection and processing to maximize detection rates; and applications of eDNA for conservation using citizen scientists. This body of work is an important contribution to the ongoing efforts to take eDNA detection of macroorganisms from technical breakthrough to established, reliable method that can be used in survey, monitoring, and research applications worldwide. While the rapid advances in this field are remarkable, important challenges remain, including consensus on best practices for collection and analysis, understanding of eDNA diffusion and transport, and avoidance of inhibition in sample collection and processing. Nonetheless, as demonstrated in this special issue, eDNA techniques for research and monitoring are beginning to realize their potential for contributing to the conservation of biodiversity globally.

Biological Conservation↗

USGS2016

Developing population models with data from marked individuals

Population viability analysis (PVA) is a powerful tool for biodiversity assessments, but its use has been limited because of the requirements for fully specified population models such as demographic structure, density-dependence, environmental stochasticity, and specification of uncertainties. Developing a fully specified population model from commonly available data sources – notably, mark–recapture studies – remains complicated due to lack of practical methods for estimating fecundity, true survival (as opposed to apparent survival), natural temporal variability in both survival and fecundity, density-dependence in the demographic parameters, and uncertainty in model parameters. We present a general method that estimates all the key parameters required to specify a stochastic, matrix-based population model, constructed using a long-term mark–recapture dataset. Unlike standard mark–recapture analyses, our approach provides estimates of true survival rates and fecundities, their respective natural temporal variabilities, and density-dependence functions, making it possible to construct a population model for long-term projection of population dynamics. Furthermore, our method includes a formal quantification of parameter uncertainty for global (multivariate) sensitivity analysis. We apply this approach to 9 bird species and demonstrate the feasibility of using data from the Monitoring Avian Productivity and Survivorship (MAPS) program. Bias-correction factors for raw estimates of survival and fecundity derived from mark–recapture data (apparent survival and juvenile:adult ratio, respectively) were non-negligible, and corrected parameters were generally more biologically reasonable than their uncorrected counterparts. Our method allows the development of fully specified stochastic population models using a single, widely available data source, substantially reducing the barriers that have until now limited the widespread application of PVA. This method is expected to greatly enhance our understanding of the processes underlying population dynamics and our ability to analyze viability and project trends for species of conservation concern.

Biological Conservation↗

USGS2017

Ecosystem implications of conserving endemic versus eradicating introduced large herbivores in the Galapagos Archipelago

Restoration of damaged ecosystems through invasive species removal and native species conservation is an increasingly common practice in biodiversity conservation. Estimating the degree of ecosystem response attributable specifically to eradication of exotic herbivores versus restoration of native herbivores is often difficult and is complicated by concurrent temporal changes in other factors, especially climate. We investigated the interactive impacts of native mega-herbivores (giant tortoises) and the eradication of large alien herbivores (goats) on vegetation productivity across the Galapagos Archipelago. We examined archipelago-wide patterns of Normalized Difference Vegetation Index (NDVI) as a proxy for vegetation productivity between 2001 and 2015 and evaluated how goat and historical and current tortoise occurrence influenced productivity. We used a breakpoint analysis to detect change in trends in productivity from five targeted areas following goat eradication. We found a positive association between tortoise occurrence and vegetation productivity and a negative association with goat occurrence. We also documented an increase in plant productivity following goat removal with recovery higher in moister regions than in arid region, potentially indicating an alternate stable state has been created in the latter. Climate variation also contributed to the detected improvement in productivity following goat eradication, sometimes obscuring the effect of eradication but more usually magnifying it by up to 300%. Our work offers perspectives regarding the effectiveness and outcomes of eradicating introduced herbivores and re-introducing native herbivores, and the merits of staging them simultaneously in order to restore critical ecosystem processes such as vegetation productivity.

Galapagos Islands↗

USGS2018

Slow and steady wins the race? Future climate and land use change leaves the imperiled Blanding's turtle (Emydoidea blandingii) behind

Climate change is accompanied by shifts in species distributions, as portions of current ranges become less suitable. Maintaining or improving landscape connectivity to facilitate species movements is a primary approach to mitigate the effects of climate change on biodiversity. However, it is not clear how ongoing changes in land use and climate may affect the existing connectivity of landscapes. We evaluated shifts in habitat suitability and connectivity for the imperiled Blanding's turtle ( Emydoidea blandingii ) in Wisconsin using species distribution modeling in combination with different future scenarios of both land use change and climate change for the 2050s. We found that climate change had significant effects on both habitat suitability and connectivity, however, there was little difference in the magnitude of effects among different economic scenarios. Under both our low- and high-CO 2 emissions scenarios, suitable habitat for the Blanding's turtle shifted northward. In the high-emissions scenario, almost no suitable habitat remained for Blanding's turtle in Wisconsin by the 2050s and there was up to a 100,000-fold increase in landscape resistance to turtle movement, suggesting the landscape essentially becomes impassable. Habitat loss and landscape resistance were exponentially greater in southern versus northern Wisconsin, indicating a strong trailing edge effect. Thus, populations at the southern edge of the range are likely to “fall behind” shifts in suitable habitat faster than northern populations. Given its limited dispersal capability, loss of suitable habitat may occur at a rate far faster than the Blanding's turtle can adjust to changing conditions via shifts in range.

Wisconsin↗