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Guidance documents: Continued support to improve operations of fish hatcheries and field sites to reduce the impact or prevent establishment of New Zealand Mudsnails and other invasive mollusks

This project tested and revised a risk assessment/management tool authored by Moffitt and Stockton designed to provide hatchery biologists and others a structure to measure risk and provide tools to control, prevent or eliminate invasive New Zealand mudsnails (NZMS) and other invasive mollusks in fish hatcheries and hatchery operations. The document has two parts: the risk assessment tool, and an appendix that summarizes options for control or management. The framework of the guidance document for risk assessment/hatchery tool combines approaches used by the Hazard Analysis and Critical Control Points (HACCP) process with those developed by the Commission for Environmental Cooperation (CEC), of Canada, Mexico, and the United States, in the Tri-National Risk Assessment Guidelines for Aquatic Alien Invasive Species. The framework approach for this attached first document assesses risk potential with two activities: probability of infestation and consequences of infestation. Each activity is treated equally to determine the risk potential. These two activities are divided into seven basic elements that utilize scientific, technical, and other relevant information in the process of the risk assessment. To determine the probability of infestation four steps are used that have scores reported or determined and averaged. This assessment follows a familiar HACCP process to assess pathways of entry, entry potential, colonization potential, spread potential. The economic, environmental and social consequences are considered as economic impact, environmental impact, and social and cultural influences. To test this document, the Principal Investigator worked to identify interested hatchery managers through contacts at regional aquaculture meetings, fish health meetings, and through the network of invasive species managers and scientists participating in the Western Regional Panel on Aquatic Nuisance Species and the 100th Meridian Initiative's Columbia River Basin Team, and the Western New Zealand Mudsnail Conference in Seattle. Targeted hatchery workshops were conducted with staff at Dworshak National Fish Hatchery Complex (ID), Similkameen Pond, Oroville WA, and Ringold Springs State Hatchery (WA). As a result of communications with hatchery staff, invasive species managers, and on site assessments of hatchery facilities, the document was modified and enhanced. Additional resources were added to keep it up to date. The result is a more simplified tool that can lead hatchery or management personnel through the process of risk assessment and provide an introduction to the risk management and communication process. In addition to the typical HACCP processes, this tool adds steps to rate and consider uncertainty and the weight of evidence regarding options and monitoring results . Uncertainty of outcome exists in most tools that can be used to control or prevent NZMS or other invasive mollusks from infesting an area. In additional this document emphasizes that specific control tools and plans must be tailored to each specific setting to consider the economic, environmental and social influences. From the testing and evaluation process, there was a strong recognition that a number of control and prevention tools previously suggested and reported in the literature from laboratory and small scale trials may not be compatible with regional and national regulations, economic constraints, social or cultural constraints, engineering or water chemistry characteristics of each facility. The options for control are summarized in the second document, Review of Control Measures for Hatcheries Infested with NZMS (Appendix A) that provides sources for additional resources and specific tools, and guidance regarding the feasibility and success of each approach. This tool also emphasizes that management plans need to be adaptive and incorporate oversight from professionals familiar with measuring risks of fish diseases, and treatments (e.g. the fish health practitioners and water quality and effluent management teams). Finally, with such a team, the adaptive management approach must be ongoing, and become a regular component of hatchery operations. Although it was the intent that this two part document would be included as part of the revised National Management and Control Plan for the NZMS proposed by the U.S. Fish and Wildlife Service (USFWS) and others, it is provided as a stand-alone document.

Cooperator Science Series↗

Assessing the distribution and habitat needs of the Least Darter and sympatric species of the Ozark and Arbuckle Mountain ecoregions

Limited information is known about factors driving the distribution of Least Darter in Oklahaoma. The Least Darter occurs in the Ozark Highland and Arbuckle Uplift ecoregions of Oklahoma which represent the southern extent of its range. Least Darter was historically recorded in Oklahoma from groundwater-fed streams. Our study objectives were to determine the distribution of Least Darter and a subset of congeners across the two ecoregions of Oklahoma and assess factors driving patch occupancy of Least Darter at a fine spatial scale. We used temporally replicated snorkel surveys conducted in July through October 2018-2019 to determine occupany by Least Darter. We snorkeled and seined for four species in each reach including two life stages of Smallmouth Bass (subadult and adult). We sampled 153 sites (i.e., riffle-pool complexes) nested within 61 stream reaches (i.e., 200-500-m long) in the Arbuckle Uplift and Ozark Highland ecoregions. Detection probability was similar between ecoregions. Least Darter was detected at more sites when snorkeling compared to seining (24 versus 18). Smallmouth Bass, Redspot Chub and Southern Redbelly Dace were typically 2-3 times more likely to be detected by snorkeling than by seining. We found relationships between occupancy and habitat parameters that were both shared among species but also species-specific. Least Darter occurrence probability in the Ozark Highlands was lower than in the Arbuckle Uplift. Occurrence probability was higher for subadult Smallmouth Bass and Southern Redbelly Dace in 2018 compared to 2019. Occurrence probabilities of both Least Darter and Southern Redbelly Dace were higher in cooler habitat patches. Southern Redbelly Dace was negatively associated with a higher proportion of pool habitat across a reach. Lastly, subadult Smallmouth Bass and Redspot Chub were more likely to occur in deeper pools and in larger streams (i.e., drainage area). We sampled one study reach (~150-m long with shallow riffles or a waterfall on each end) in the Arbuckle Uplift (winter and summer sampling) and Ozark Highland (winter sampling) ecoregions to determine fine-scale habitat selection during the thermally harsh seasons. We developed transects across the reaches to quantify depth, velocity, substrate, cover and water temperature. We found Least Darter used higher water column velocities and shallower water depths with little vegetation during the winter. The average water depth used was similar during summer and winter (~ 20 cm deep). Least Darter used denser vegetation during the summer and tended to avoid coarse substrates in both seasons. If the conservation of Least Darter is a management goal, actions to mitigate increasing stream water temperatures (e.g., protection of springs and riparian corridors) and protecting stream morphologies that facilitate species separations (i.e., allow for a wide range of water depth and velocities) may be beneficial (e.g., fencing cattle from streams, promoting natural bankful flows during spring)

Oklahoma↗

Proceedings of the 12th Biennial Conference of research on the Colorado Plateau

Introduction The Colorado Plateau is a physiographic region that encompasses 330,000 square kilometers in parts of four states in the southwestern United States (Colorado, Utah, New Mexico, and Arizona). Known for its high deserts, the Colorado Plateau also includes isolated mountains, high plateaus, and rugged canyons. Not only is the region topographically diverse, but geologically, biologically, and culturally diverse as well. The landscape is managed by Federal entities including the Bureau of Land Management, the National Park Service, and the U.S. Forest Service; Tribal nations including the Navajo Nation, Kaibab Paiute, Mountain Ute, Southern Ute, Hopi, Zuni, Hualapai, Havasupai, and White Mountain Apache Tribes; State land and wildlife management agencies; and privately owned holdings, creating complex interactions and management challenges. Population growth, increased tourism to Federal and State lands, and energy development have increased water demands and altered land-use patterns, and these changes have emerged as management challenges facing the people working and living in the region. Climate change, particularly the ongoing drought, has exacerbated the effects of population growth, land-use change, and other stressors such as invasive species. As managers seek solutions to the challenges facing the region’s natural and cultural resources, the Biennial Conference of Science and Management of the Colorado Plateau has become an important venue for exchanging information about emerging management concerns and recent scientific research. Each biennial conference has sought to promote discussion, information sharing, and productive communication among the managers, scientists, students, administrators, tribal representatives, and others who attend the conference with the goal of enhancing the use of the best available science to manage the region’s incomparable natural and cultural resources. The publication and dissemination of a conference proceedings series expands the reach of the conference beyond those people in attendance and creates a record on the research presented. The idea of producing a conference proceedings, and its subsequent publication, first occurred in 1993 following the first biennial conference in 1991. A published volume of contributed papers has followed each subsequent biennial conference, including this volume. The venue for publishing proceedings has changed over the years and has included the National Park Service, the Government Printing Office, the U.S. Geological Survey, and University of Arizona Press. Recently, van Riper and others (2015) published a compilation of the abstracts from the 11 previous conference proceedings. Collectively, the proceedings highlight approximately 25 years of natural- and cultural-resources research, promoting the integration of research with resource management across the Colorado Plateau. This volume is freely downloadable by the public, thereby further expanding the influence of this conference beyond the Colorado Plateau. The 12th Biennial Conference held in Flagstaff, Arizona, from September 16 to 19, 2013, covered a range of topics in the physical, biological, and socio-cultural sciences. The conference was organized and hosted by Northern Arizona University’s ( NAU) Merriam-Powell Center for Environmental Research, the Colorado Plateau Cooperative Ecosystem Studies Unit, and the U.S. Geological Survey Southwest Biological Science Center. Financial and in-kind support was provided by a wide range of organizations including the U.S. Forest Service, National Park Service, Bureau of Land Management, Grand Canyon Trust, Colorado Plateau Research Station, and various NAU entities. NAU sponsors include the Landscape Conservation Initiative, School of Forestry, School of Earth Science and Environmental Sustainability, Office of the Provost, and Office of the Vice President of Research. Contributors to these proceedings include researchers and managers from Federal, State, and Tribal governments, universities, private entities, and non-profit organizations. In this regard, this conference has wide-ranging support and participation among private and public entities involved in the science and management of natural resources on the Colorado Plateau.

Arizona, Colorado, New Mexico, Utah↗

Flood-frequency estimation for very low annual exceedance probabilities using historical, paleoflood, and regional information with consideration of nonstationarity

Streamflow estimates for floods with an annual exceedance probability of 0.001 or lower are needed to accurately portray risks to critical infrastructure, such as nuclear powerplants and large dams. However, extrapolating flood-frequency curves developed from at-site systematic streamflow records to very low annual exceedance probabilities (less than 0.001) results in large uncertainties in the streamflow estimates. Traditionally, methods for statistically estimating flood frequency have relied on the systematic streamflow record, which provides a time series of annual maximum flood peaks, often including some historical peaks. However, most peak-flow records are less than 100 years, and uncertainties are large when trying to extrapolate magnitudes of very low annual exceedance probability events. Other data may be available that extend the record beyond the systematic dataset. Historical data are defined as data from outside the period of systematic records but within the period of human records. Examples of historical information include flood estimates from other agencies and newspaper accounts that can be translated to flood magnitude point estimates, interval estimates, or perception thresholds (such as a statement that an 1880 flood was the largest since 1869). Paleoflood data, which may also extend the dataset, include a broad range of information about flood occurrence or magnitude from sources like sediment deposits or tree rings. Several assumptions are made in flood-frequency analysis, and an understanding of whether the data conform to these assumptions is desired. A particularly difficult assumption to evaluate for flood-frequency analysis is the underlying assumption that the flood series is stationary—the assumption that a time series of peak flow varies around a constant mean within a particular range of values (constant variance). As the hydrologic community’s understanding of natural systems and anthropogenic effects on streamflows has evolved, the community has come to understand that many surface-water systems exhibit one or more forms of nonstationarity, and thus the stationarity assumption is often violated to some degree. However, there is currently (2020) no consensus among hydrologists regarding the most appropriate flood-frequency-analysis methods for nonstationary systems, and this topic remains an active area of research. A literature review was completed to summarize the state of the science of flood frequency. The literature review highlights tools available to detect nonstationarities and identifies approaches that include external information to inform flood-frequency analysis. To demonstrate methods for initial data analysis and for incorporating historical and paleoflood information in flood-frequency analysis, five sites were selected: the Red River of the North at James Avenue Pumping Station, Winnipeg, Manitoba, Canada; lower reach, Rapid Creek, South Dakota; Spring Creek, South Dakota; Cherry Creek near Melvin, Colorado; and Escalante River near Escalante, Utah. The sites were chosen for the availability of published historical and paleoflood data and for their geographic diversity and unique characteristics, which highlighted issues such as autocorrelation, change points, trends, outlier peaks, or short periods of record. An initial data analysis that involved examining records for autocorrelation, change points, and trends was completed for all sites. The flood-frequency analysis completed for this study used version 7.2 of the U.S. Geological Survey PeakFQ program. Multiple analyses were done on each site documenting the change in the flood-frequency curve when additional historical or paleoflood data were added. When other flood-frequency studies were available, their results were compared to the results here. The comparisons in some cases simply show the effect of additional years of data, whereas other comparisons show results from probability distributions or fitting methods other than those used in PeakFQ. For the Red River of the North, flood-frequency analysis shows that paleoflood data appear necessary to reasonably estimate very low annual exceedance probabilities. For the analysis of the lower reach of Rapid Creek and Spring Creek, paleoflood information helped put a high outlier from the systematic period in context; however, very low annual exceedance probabilities at these sites still had extraordinarily large confidence bounds. These sites also showed that paleoflood information might be transferred from one site to another, with the caveat that this is a case where we had existing paleoflood data to test the transfer of paleoflood information—this is not the case at many sites, and transferring paleoflood information requires assumptions about the comparability of floods at the sites. The Cherry Creek analysis affirmed the result of an earlier study that showed that the generalized Pareto distribution was not a good distribution for estimating very low annual exceedance probabilities. The Escalante River analysis showed that adding paleoflood information might increase uncertainty for very low annual exceedance probabilities, compared to analysis with the systematic period of record information only, when the paleoflood peaks are of much larger magnitudes than the systematic record.

Scientific Investigations Report↗

Peak-flow and low-flow magnitude estimates at defined frequencies and durations for nontidal streams in Delaware

Reliable estimates of the magnitude of peak flows in streams are required for the economical and safe design of transportation and water conveyance structures. In addition, reliable estimates of the magnitude of low flows at defined frequencies and durations are needed for meeting regulatory requirements, quantifying base flows in streams and rivers, and evaluating time of travel and dilution of toxic spills. This report, in cooperation with the Delaware Department of Transportation and the Delaware Geological Survey, presents methods for estimating the magnitude of peak flows and low flows at defined frequencies and durations on nontidal streams in Delaware, at locations both monitored by streamflow-gage sites and ungaged. Methods are presented for estimating (1) the magnitude of peak flows for return periods ranging from 2 to 500 years (50-percent to 0.2-percent annual-exceedance probability), and (2) the magnitude of low flows as applied to 7-, 14-, and 30-consecutive day low-flow periods with recurrence intervals of 2, 10, and 20 years (50-, 10-, and 5-percent annual non-exceedance probabilities). These methods are applicable to watersheds that exhibit a full range of development conditions in Delaware. The report also describes StreamStats, a web application that allows users to easily obtain peak-flow and low-flow magnitude estimates for user-selected locations in Delaware. Peak-flow and low-flow magnitude estimates for ungaged sites are obtained using statistical regression analysis through a process known as regionalization, where information from a group of streamflow-gage sites within a region forms the basis for estimates for ungaged sites within the same region. Ninety-four streamflow-gage sites in and near Delaware with at least 10 years of nonregulated annual peak-flow data were used for the peak-flow regression analysis, a subset of the 121 sites for which peak-flow estimates were computed. These sites included both continuous-record streamflow-gage sites as well as partial record sites. Forty-five streamflow-gage sites with at least 10 years of nonregulated low-flow data available were used for the low-flow regression analyses, a subset of the 68 sites for which low-flow estimates were computed. Estimates for gaged sites are obtained by combining (1) the station peak-flow statistics (mean, standard deviation, and skew) and peak-flow estimates using the recent Bulletin 17C guidelines that incorporate the Expected Moments Algorithm with (2) regional estimates of peak-flow magnitude derived from regional regression equations and regional skew derived from sites with records greater than or equal to 35 years. Example peak-flow estimate calculations using the methods presented in the report are given for (1) ungaged sites, (2) gaged sites, (3) sites upstream or downstream from a gaged location, and (4) sites between gaged locations. Estimates for low-flow gaged sites are obtained by combining (1) the station low-flow statistics (mean, standard deviation, and skew) and low-flow estimates with (2) regional estimates of low-flow magnitude derived from regional regression equations. Example low-flow estimate calculations using the methods presented in the report are given for (1) ungaged sites, (2) gaged sites, (3) sites upstream or downstream from a gaged location, and (4) sites between gaged locations. A total of 54 sites in the Coastal Plain region were used to develop peak-flow regressions for the region and 40 sites were used for the Piedmont region. Similarly, 24 sites were used for low-flow regression equation development in the Coastal Plain, with 21 in the Piedmont. Peak and low-flow site inclusion in the Coastal Plain tended to be more restricted with tidal influence and ranges of basin characteristics, including drainage area, limiting regression equation development and application. Regional regression equations for peak flows and low flows, as applicable to ungaged sites in the Piedmont and Coastal Plain Physiographic Provinces in Delaware, are presented. Peak-flow regression equations used variables that quantified drainage area, basin slope, percent area with well-drained soils, percent area with poorly drained soils, impervious area, and percent area of surface water storage in estimating peak-flow estimates, whereas low-flow regression equations used only drainage area and percent poorly drained soils in the estimation of low flows. Average standard errors for peak-flow regressions tended to be lower than those for low- flow regressions, with lower errors in the Piedmont region for both peak- and low-flow regressions. For peak-flow estimates, a sensitivity analysis of Piedmont regression equation estimates to changes in impervious area is also presented. Additional topics associated with the analyses performed during the study are discussed, including (1) the availability and description of 32 basin and climatic characteristics considered during the development of the regional regression equations; (2) the treatment of increasing trends in the annual peak-flow series identified at 18 gaged sites and inclusion in or exclusion from the regional analysis; (3) regional skew analysis and determination of regression regions; (4) sample adjustments and removal of sites owing to regulation and redundancy; and (5) a brief comparison of peak- and low-flow estimates at gages used in previous studies.

Delaware↗

Geohydrologic and water-quality characterization of a fractured-bedrock test hole in an area of Marcellus Shale gas development, Sullivan County, Pennsylvania

The stratigraphy, water-bearing zones, and quality of groundwater were characterized in a 1,400-ft-deep test hole drilled during 2013 in fractured bedrock in Sullivan County, Pa., by collection and analysis of measurements made during drilling, geophysical logs, and depth-specific hydraulic tests and water samples. The multidisciplinary characterization of the test hole was a cooperative effort between the Pennsylvania Department of Natural Resources, Bureau of Geological Survey (BGS), and the U.S. Geological Survey (USGS). The study provided information to aid the bedrock mapping of the Laporte 7.5-minute quad-rangle by BGS to help quantify the depth and character of fresh and saline groundwater in an area of shale-gas exploration (described in this report), which could help gas operators protect groundwater resources. The Laporte test hole was drilled with air-hammer methods in an upland setting in the headwaters of Loyalsock Creek in the Glaciated High Plateau section of the Appalachian Plateaus physiographic province. Bedrock residuum and till were penetrated from land surface to 8.5 ft, the Huntley Mountain Formation of Mississippian and Devonian age was penetrated from 8.5 to 540 ft, and the Catskill Formation of Devonian age was penetrated from 540 to 1,400 ft. Fractures, determined from optical televiewer, acoustic televiewer, and video logs, were commonly encountered to 200 ft bls (below land surface), then decreased exponentially with depth, except at a highly fractured zone from 637 to 644 ft bls. Most fractures were along bedding planes and had a strike of about 243 degrees and dip about 4 degrees to the northwest, consistent with the test-hole location on the north limb of the Muncy Creek anticline. Few fractures were noted below 650 ft. The depths of fresh and saline water-bearing fracture zones were identified in the test hole by geophysical-log analysis and were verified by pumping samples from zones isolated with packers and by collecting samples in the open hole with a wire-line point sampler. Six water-bearing zones associated with single or multiple fractures were identified at depths of 130–135, 180, 267–275, 425, 637–644, and 1,003 ft bls. Under ambient conditions, fresh water entered the hole from fractures at 130-135 and 180 ft bls, flowed downward and exited at fractures from 267–275, 425, and 637–644 ft. When pumped at 16.2 gal/min, most of the water from the open test hole was contributed from the fracture at 180 ft bls. Transmissivity, estimated from analysis of the specific-capacity data and flowmeter logs, is about 850 ft 2 /d for the entire open hole, and about 60 percent of the transmissivity is contributed from the fracture zone at 180 ft bls. The hydraulic heads in the deep water-bearing zones at 425 and 637–644 ft were about 100 ft lower than hydraulic heads in shallow water-bearing zones at 180 ft bls and above, indicating a large downward vertical hydraulic gradient. Water samples pumped from fracture zones isolated by packers at and above the water-bearing zone at 450 ft bls were fresh with dissolved-solids contents of 105 mg/L or less. The sample isolated at 637–644 ft bls was probably affected by leakage around packers, but the specific-conductance samples collected during drilling that were believed to be representa-tive of the fracture zone at 637–644 ft bls indicated slightly saline water. Below the 637–644 ft zone, a flowmeter log in the open hole did not detect any vertical flow, and the temperature log approached the geothermal gradient, indicating little ambient fluid flow and minimal fracture transmissivity below this depth. A petrophysical-log analysis using estimates of formation water resistivity from Archie’s Equation indicated an apparent transition from fresh to saline water in the sandstones occurs between 450 to 900 ft bls, with saline water indicated below 900 ft. Small seeps of saline water were delineated at 958, 989, and 1,003 ft bls by a time series of specific-conductance logs, and a discrete-point water sample at 990 ft bls with total dissolved-solids concentration of 19,900 mg/L verified that highly saline water was present below 900 ft bls. Occurrence of saline water at a depth of about 900 ft bls is below altitude of streams within 3 to 5 miles of the test hole but is about 930 ft above the altitude at the mouth of Loyalsock Creek where is enters the West Branch Susquehanna River at Montours-ville, Pa. The depth to saline water in this test hole is close to depths estimated at two other deep test holes drilled by the BGS in upland settings in Bradford and Tioga Counties in north-ern Pennsylvania. The saline water from 990 ft bls had a chemical composition similar to Appalachian Basin brines that had been diluted with fresh water. Predominant ions in the saline water were sodium, chloride, and calcium. Trace constituents of strontium, bromide, barium, lithium, and molybdenum were all more than 5,000 times greater than in freshwater samples from 167 or 270 ft bls. Methane concentration in the saline water sample from 990 ft was 120 mg/L. The concentration ratios of methane to higher-chain hydrocarbon gases and isotopic ratios of 13 C/ 12 C and 2 H/ 1 H of methane indicate that the gases are likely of thermogenic origin. In the sample from 990 ft bls, the 13 C/ 12 C of methane was less negative (-34.81 per mil) than 13 C/ 12 C of ethane (-37.1 per mil). Isotopic reversals such as this are generally found in gases from rocks older than the Catskill Formation, so its recognition in a natural upland setting at relatively shallow depth could be important when interpreting isotopic results to identify the origin of stray gas in the area.

Pennsylvania↗

Development and application of a screening model for simulating regional ground-water flow in the St. Croix River basin, Minnesota and Wisconsin

A series of databases and an accompanying screening model were constructed by the U.S. Geological Survey, in cooperation with the National Park Service, to better understand the regional ground-water-flow system and its relation to stream drainage in the St. Croix River Basin. The St. Croix River and its tributaries drain about 8,000 square miles in northeastern Minnesota and northwestern Wisconsin. The databases contain information for the entire St. Croix River Basin pertaining to well logs, lithology, thickness of lithologic groups, ground-water levels, streamflow, and well pumpage. Maps and generalized cross sections created from the compiled data show the lithologic groups, extending from the water table to the crystalline bedrock, through which ground water flows. These lithologic groups are: fine-grained unconsolidated deposits; coarse-grained unconsolidated deposits; sandstone bedrock; carbonate bedrock; and other bedrock lithologies including shale, siltstone, conglomerate, and igneous intrusions. The steady-state screening model treats the ground-water-flow system as a single layer with transmissivity zones that reflect the distribution of lithologic groups, and with recharge zones that correspond to general areas of high or low evapotranspiration. The model includes representation of second- and higher-order streams and municipal and other high-capacity production wells. The analytic-element model code GFLOW was used to simulate the regional ground-water flow, the water-table surface across the St. Croix River Basin, and base-flow contributions from ground water to streams. In addition, the model routes tributary base flow through the stream network to the St. Croix River. The parameter-estimation inverse model UCODE was linked to the GFLOW model to select the combination of parameter values best able to match over 5,000 water-level measurements and base-flow estimates at 22 streamflow-gaging stations. Results from the calibrated screening model show ground-water contributing areas for selected stream reaches within the basin. The delineation of these areas is useful to water-resource managers concerned with protection of fisheries and other resources. The model results also identify the areas of the basin where ground-water travel time from the water table to streams and wells is relatively short (less than 50 years). Ninety percent of the simulated ground-water pathlines require travel times between 3 and 260 years. The median pathline distance traversed and the median pathline velocity were 1.7 mi and 177 ft/y, respectively. It is important to recognize the limitations of this screening model. Heterogeneities in subsurface properties and in recharge rates are considered only at a very broad scale (miles to tens of miles). No account is taken of vertical variations in properties or pumping rates, and no provision is made to account for stacked ground-water-flow systems that have different flow patterns at different depths. Small-scale (hundreds to thousands of feet) flow systems associated with minor water bodies are neglected, and as a result, the model is not useful for simulating typical site-specific problems. Despite its limitations, the model serves as a framework for understanding the regional pattern of ground-water flow and as a starting point for a generation of more targeted and detailed ground-water models that would be needed to address emerging water-supply and water-quality concerns in the St. Croix River Basin.

Scientific Investigations Report↗

Flood-inundation maps for the lower Pawcatuck River in Westerly, Rhode Island, and Stonington and North Stonington, Connecticut

A series of 11 digital flood-inundation maps was developed for a 5.5-mile reach of the lower Pawcatuck River in Westerly, Rhode Island, and Stonington and North Stonington, Connecticut, by the U.S. Geological Survey (USGS) in cooperation with the Town of Westerly, Rhode Island, and the Rhode Island Office of Housing and Community Development. The coverage of the maps extends from downstream from the Ashaway River inflow at the State Border between Hopkinton and Westerly, Rhode Island, and North Stonington, Connecticut, to about 500 feet (ft) downstream from the U.S. Route 1/Broad Street bridge on the State border between Westerly, Rhode Island, and Stonington, Connecticut. A one-dimensional step-backwater hydraulic model created and calibrated for an ongoing (2018) Federal Emergency Management Agency Flood-Insurance Study for New London County, Connecticut and Washington County, Rhode Island was updated for this study. The hydraulic model reflects the removal of the White Rock dam during 2015–16, and was calibrated using the stage-discharge relation at the USGS Pawcatuck River at Westerly, Rhode Island, streamgage (01118500) and documented high-water marks from the March 30, 2010, flood, which had a peak flow slightly greater than the estimated 0.2-percent annual exceedance probability floodflow. The hydraulic model was used to compute water-surface profiles for 11 flood stages at 1-ft intervals referenced to the USGS Pawcatuck River at Westerly, Rhode Island, streamgage (01118500) and ranging from 6.0 ft (3.32 ft, North American Vertical Datum of 1988), which is the National Weather Service Advanced Hydrologic Prediction Service flood category “action stage,” to 16.0 ft (13.32 ft, North American Vertical Datum of 1988), which is the maximum stage of the stage-discharge relation at the streamgage and exceeds the National Weather Service Advanced Hydrologic Prediction Service flood category “major flood stage” of 11.0 ft. The simulated water-surface profiles were combined with a geographic information system digital elevation model derived from light detection and ranging (lidar) data with a 1.0-ft vertical accuracy to create flood-inundation maps. The flood-inundation maps depict estimates of the areal extent and depth of flooding corresponding to 11 selected flood stages at the streamgage. The flood-inundation maps depict only riverine flooding and do not depict any tidal backwater or coastal storm surge that could occur in the lower part of the river reach. The flood-inundation maps can be accessed through the USGS Flood Inundation Mapping Science website at https://water.usgs.gov/osw/flood_inundation . Near-real-time stages and discharges at the Pawcatuck River streamgage can be obtained from the USGS National Water Information System at https://waterdata.usgs.gov/ . The National Weather Service Advanced Hydrologic Prediction Service provides flood forecast of stage for this site (WSTR1) at https://water.weather.gov/ahps/ . The availability of flood-inundation maps referenced to current and forecasted water levels at the USGS Pawcatuck River at Westerly, Rhode Island streamgage (01118500) can provide emergency management personnel and residents with information that is critical for flood response activities such as evacuations and road closures, and postflood recovery efforts. The flood-inundation maps are nonregulatory but provide Federal, State, and local agencies and the public with estimates of the potential extent of flooding during flood events.

Connecticut, Rhode Island↗

Crystalline-rock ejecta and shocked minerals of the Chesapeake Bay impact structure, USGS-NASA Langley core, Hampton, Virginia, with supplemental constraints on the age of impact

The USGS-NASA Langley corehole at Hampton , Va., was drilled 2000 as the first in a series of new coreholes drilled in the late Eocene Chesapeake Bay impact structure to gain a comprehensive understanding of its three-dimensional character. This understanding is important for assessing ground-water resources in the region, as well as for learning about marine impacts on Earth. We studied crystalline-rock ejecta and shock-metamorphosed minerals from the Langley core to determine what they reveal about the geology of crystalline rocks beneath the Atlantic Coastal Plain and how those rocks were affected by the impact . An unusual polymict diamicton, informally called the Exmore beds (upper Eocene), is 33.8 meters (m; 110.9 feet (ft)) thick and lies at a depth of 269.4 to 235.65 m (884.0 to 773.12 ft) in the core . This matrix-supported sedimentary deposit contains clasts of Tertiary and Cretaceous sediment (ranging up to boulder size) and sparse pebbles of crystalline rock . The matrix consists of muddy sand that contains abundant quartz grains and minor glauconite and potassium feldspar. Significantly, the sandy matrix of the Exmore beds contains sparse quartz grains (0.1 to 0.3 millimeter (0.004 to 0.012 inch) in diameter) that contain multiple sets of intersecting planar deformation features formerly referred to as shock lamellae. As many as five different sets have been observed in some quartz grains. Planar deformation features also occur in quartz grains in reworked crystalline-rock clasts in the Exmore beds. Such grains are clearly of shock-metamorphic origin. The presence of these features indicates that the quartz grains have experienced pressures greater than 6 gigapascals (GPa) and strain rates greater than 10 6 /second. Thus, the shock-metamorphosed quartz grains, although rare, provide clear and convincing evidence that the Exmore beds are of hybrid impact origin. Identification of shocked quartz grains in the Langley core adds to the number of sites in the structure where their presence is confirmed. Most of the clasts of crystalline rock that are in and just below the Exmore beds are rounded, detrital, and typical of coastal plain sediments. However, a few have angular shapes and consist of cataclastically deformed felsite having aphanitic-porphyritic to aphanitic texture and peraluminous rhyolite composition. Three of these clasts contain quartz grains that display two sets of planar deformation features of shock-metamorphic origin. Shock-metamorphosed quartz is an integral part of the cataclastic fabric in these three clasts, indicating that both the fabric and the shocked quartz were produced by the same high-energy impact event. Some felsite clasts have spherulitic textures that may be features either of an impact melt or of preimpact volcanic rocks. A weighted-mean total-fusion 40 Ar/ 39 Ar age of 35.3±0.1 Ma (±lσ) for 19 analyses of 4 North American tektites records the age of the late Eocene Chesapeake Bay impact event.

Chesapeake Bay↗

Floods in the Canadian and Pecos River basins of New Mexico, May and June 1937

In May and June floods occurred in the Canadian and Pecos River Basins of New Mexico that were unusually high and in many places were record breaking. The floods were caused by heavy rains that occurred over the eastern part of the State from May 23 to June 4 in a series of intense and intermittent storms. During these storms of the cloudburst type as much as 12 inches of rain fell in the 13-day period, and a fall of 7 inches in 2 hours and 40 minutes was reported from the vicinity of Clayton. Heavy rains also fell in the mountainous region west of Roswell, amounting to as much as l0 inches at some places. Much of the region that had excessive rainfall is relatively flat and has no well-defined drainage system. From these areas there was very little run-off and practically no water was contributed to the major streams. Hail fell at many places in eastern New Mexico, causing damage to crops, livestock, and other property. Hail fell somewhere in the Canadian and Pecos River Basins almost every day during the storm period, but the duration of the fall was generally short. The largest hailstones were reported from Clayton, where one stone measured 8 inches in circumference and weighed 9 ounces; at Centerville, where reports state that some stones were 9 to 10 inches in circumference; and near Roswell, where it was reported that six stones would fill a gallon bucket. The Canadian River flood reached a peak at Logan of 110,000 second-feet, which has been exceeded in this century only by the floods of 1904, 1909, and 1914. The total run-off at Logan for the flood period has been computed as 653,800 acre-feet. At Santa Rosa the Pecos River reached a maximum discharge of 88,200 second-feet, which is greater than any previously recorded. This flood was partly stored in the Alamogordo Reservoir; the peak below the reservoir was only 25,200 second-feet. The Pecos River flood at Roswell reached a maximum discharge of more than 80,000 second-feet. This water came mostly from tributaries that have .their sources in the mountainous area west of Roswell. The Cienaga del Macho, ordinarily a small dry creek, discharged about 49,800 second-feet at its peak. The Rio Hondo experienced several flood peaks, the largest at Roswell probably being near 20,000 second-feet. Berrendo Creek, which enters the Rio Hondo near Roswell, had a computed peak discharge of 37,700 second-feet. Roswell was subjected to several floods that inundated large areas of the town. Considerable damage was done by the water, which covered nearly all the area occupied by the town. Lake McMillan, an artificial reservoir on the Pecos River about 12 miles above Carlsbad, was put to a severe strain by the large quantity of water passing through it, but no serious damage resulted. The capacity of the lake at spillway level is about 39,000 acre-feet, but at the peak of the flood the lake held about 86,000 acre-feet. The total quantity of water passing through the lake during the flood period was more than 440,000 acre-feet. This report presents data pertinent to the floods of May and June 1937, including results of peak discharge determinations made at about 14 miscellaneous places, records of peak stages and discharges and of mean daily discharges during the flood period at 23 regular river-measurement stations, records of rainfall at about 190 places, an isohyetal map showing rainfall over the entire State and two isohyetal maps showing rainfall over the Canadian and Pecos River Basins, and a discussion of the weather conditions during the flood period, including an upper-air wind and pressure chart of the United States for May 28, 1937. In addition to the information listed above the report includes a summary of records of past floods at all places in New Mexico at which authentic records were available.

New Mexico↗

Flood-inundation maps for the Pawtuxet River in West Warwick, Warwick, and Cranston, Rhode Island

A series of 15 digital flood-inundation maps was developed for a 10.2-mile reach of the Pawtuxet River in the municipalities of West Warwick, Warwick, and Cranston, Rhode Island, by the U.S. Geological Survey (USGS), in cooperation with the Rhode Island Emergency Management Agency and the U.S. Army Corps of Engineers. The coverage of the maps extends downstream from Natick Pond dam near State Route 33/Providence Street bridge in West Warwick to the mouth of the river at Pawtuxet Cove (Broad Street bridge) on the border between Cranston and Warwick, R.I. A one-dimensional step-backwater hydraulic model created and calibrated for the Federal Emergency Management Agency Flood Insurance Studies for Kent and Providence Counties in 2015 was updated for this study. The updated hydraulic model reflects the removal of the Pawtuxet Falls dam during 2011 and the raised elevation of a levee surrounding the Warwick Sewer Authority wastewater treatment facility during 2014–17. The hydraulic model was calibrated by using the current (2018) stage-discharge relation at the USGS Pawtuxet River at Cranston, Rhode Island, streamgage (01116500) and documented high-water marks from the March 31, 2010, flood, which had a peak flow greater than the estimated 0.2-percent annual exceedance probability floodflow. The hydraulic model was used to compute water-surface profiles for 15 flood stages at 1-foot (ft) intervals referenced to the USGS Pawtuxet River at Cranston, Rhode Island, streamgage (01116500) and ranging from 8.0 ft (15.2 ft, North American Vertical Datum of 1988), which is the National Weather Service Advanced Hydrologic Prediction Service flood category “action stage,” to 22.0 ft (29.2 ft, North American Vertical Datum of 1988), which is the maximum stage of the stage-discharge relation at the streamgage and exceeds the National Weather Service Advanced Hydrologic Prediction Service flood category “major flood stage” of 13.0 ft. The simulated water-surface profiles were combined with a geographic information system digital elevation model derived from light detection and ranging (lidar) data with a 1.0-ft vertical accuracy to create flood-inundation maps. The flood-inundation maps depict estimates of the areal extent and depth of flooding corresponding to 15 selected flood stages at the streamgage. The flood-inundation maps depict only riverine flooding and do not depict any tidal backwater or coastal storm surge that might occur in the lower part of the river reach. The flood-inundation maps can be accessed through the USGS Flood Inundation Mapping Science website at https://water.usgs.gov/osw/flood_inundation . Near-real-time stages and discharges at the Pawtuxet River streamgage can be obtained from the USGS National Water Information System at https://waterdata.usgs.gov/ . The National Weather Service Advanced Hydrologic Prediction Service provides flood forecasts of stage for this site (CRAR1) at https:/water.weather.gov/ahps/ . The availability of flood-inundation maps referenced to current and forecasted water levels at the USGS Pawtuxet River at Cranston, Rhode Island, streamgage (01116500) can provide emergency management personnel and residents with information that is critical for flood response activities, such as evacuations and road closures, and postflood recovery efforts. The flood-inundation maps are nonregulatory but provide Federal, State, and local agencies and the public with estimates of the potential extent of flooding during flood events.

Rhode Island↗

Sediment studies in the Assabet River, central Massachusetts, 2003

From its headwaters in Westborough, Massachusetts, to its confluence with the Sudbury River, the 53-kilometer-long Assabet River passes through a series of small towns and mixed land-use areas. Along the way, wastewater-treatment plants release nutrient-rich effluents that contribute to the eutrophic state of this waterway. This condition is most obvious where the river is impounded by a series of dams that have sequestered large amounts of sediment and support rooted and floating macrophytes and epiphytic algae. The water in parts of these impoundments may also have low concentrations of dissolved oxygen, another symptom of eutrophication. All of the impoundments had relatively shallow maximum water depths, which ranged from approximately 2.4 to 3.4 meters, and all had extensive shallow areas. Sediment volumes estimated for the six impoundments ranged from approximately 380 cubic meters in the Aluminum City impoundment to 580,000 cubic meters in the Ben Smith impoundment. The other impoundments had sediment volumes of 120,000 cubic meters (Powdermill), 67,000 cubic meters (Gleasondale), 55,000 cubic meters (Hudson), and 42,000 cubic meters (Allen Street). The principal objective of this study was the determination of sediment volume, extent, and chemistry, in particular, the characterization of toxic inorganic and organic chemicals in the sediments. To determine the bulk-sediment chemical-constituent concentrations, more than one hundred sediment cores were collected in pairs from the six impoundments. One core from each pair was sampled for inorganic constituents and the other for organic constituents. Most of the cores analyzed for inorganics were sectioned to provide information on the vertical distribution of analytes; a subset of the cores analyzed for organics was also sectioned. Approximately 200 samples were analyzed for inorganic constituents and 100 for organics; more than 10 percent were quality-control replicate or blank samples. Maximum bulk-sediment phosphorus concentrations in surface samples from the impoundments increased along a downstream gradient, with the exception of samples from the last impoundment, where the concentrations decreased. In addition, the highest phosphorus concentrations were generally in the surface samples; this finding may prove helpful if surface dredging is selected as a means to control phosphorus release from sediments. There is no known relation, however, between bulk-sediment concentration of phosphorus and the concentrations of phosphorus available to biota. Potentially toxic metals, including arsenic, cadmium, chromium, copper, nickel, lead, and zinc were frequently measured at concentrations that exceeded U.S. Environmental Protection Agency sediment-quality guidelines for the protection of aquatic life and that occasionally exceeded Massachusetts Department of Environmental Protection guidelines governing landfill disposal (reuse). Due to the effects of matrix interference and sample dilution on laboratory analyses, neither pesticides nor volatile organic compounds were detected at any sites. However, samples collected in other studies from nearby streams indicated the possibility that pesticides might have been detected in the impoundments if not for these analytical problems. Although polychlorinated biphenyl concentrations, as individual Aroclors, generally exceeded published U.S. Environmental Protection Agency guideline concentrations for potential effects on aquatic life, the U.S. Environmental Protection Agency guideline concentrations for human contact or the Massachusetts guidelines for landfill reuse were rarely exceeded. Concentrations of polycyclic aromatic hydrocarbons, both individually and total, frequently were greater than guideline concentrations. Concentrations of total extractable petroleum hydrocarbons did not exceed Massachusetts guideline concentrations in any samples. When the sediment analytes from surface samples are considered togethe

Scientific Investigations Report↗

Simulated responses of streams and ponds to groundwater withdrawals and wastewater return flows in southeastern Massachusetts

Water use, such as withdrawals, wastewater return flows, and interbasin transfers, can alter streamflow regimes, water quality, and the integrity of aquatic habitat and affect the availability of water for human and ecosystem needs. To provide the information needed to determine alteration of streamflows and pond water levels in southeastern Massachusetts, existing groundwater models of the Plymouth-Carver region and western (Sagamore flow lens) and eastern (Monomoy flow lens) Cape Cod were used to delineate subbasins and simulate long-term average and average monthly streamflows and pond levels for a series of water-use conditions. Model simulations were used to determine the extent to which streamflows and pond levels were altered by comparing simulated streamflows and pond levels under predevelopment conditions with streamflows and pond levels under pumping only and pumping with wastewater return flow conditions. The pumping and wastewater return flow rates used in this study are the same as those used in previously published U.S. Geological Survey studies in southeastern Massachusetts and represent the period from 2000 to 2005. Streamflow alteration for the nontidal portions of streams in southeastern Massachusetts was evaluated within and at the downstream outlets of 78 groundwater subbasins delineated for this study. Evaluation of streamflow alteration at subbasin outlets is consistent with the approach used by the U.S. Geological Survey for the topographically derived subbasins in the rest of Massachusetts. The net effect of pumping and wastewater return flows on streamflows and pond levels varied by location and included no change in areas minimally affected by water use, decreases in areas affected more by pumping than by wastewater return flows, or increases in areas affected more by wastewater return flows than by pumping. Simulated alterations to long-term average streamflows at subbasin outlets in response to pumping with wastewater return flows were within about 10 percent of predevelopment streamflows for most of the subbasins in the study area. Alterations ranged from a decrease (depletion) of 43.9 percent at an unnamed tributary to Salt Pond in the Plymouth-Carver region to an increase (surcharge) of 18.2 percent at an unnamed tributary to the Centerville River on western Cape Cod. In general, the relative effects of pumping and wastewater return flows typically were larger in the subbasins with low streamflows than in the subbasins with high streamflows, and there were more depleted streamflows than surcharged streamflows. Increases in streamflows in response to wastewater return flows were generally largest in subbasins with a high density of septic systems or a centralized wastewater treatment facility. For average monthly conditions, streamflow alteration results were similar spatially to results for long-term average conditions. However, differences in the extent of alteration by month were observed; percentage streamflow depletions in most subbasins typically were greatest during the low-streamflow months of August and October. The percentages of the total number of ponds affected by pumping with wastewater return flows under long-term average conditions in the modeled areas were 28 percent for the Plymouth-Carver region, 67 percent for western Cape Cod, and 75 percent for eastern Cape Cod. Pond-level alterations ranged from a decrease of 4.6 feet at Great South Pond in the Plymouth Carver region to an increase of 0.9 feet at Wequaquet Lake in western Cape Cod. The magnitudes of monthly alterations to pond water levels were fairly consistent throughout the year.

Massachusetts↗

Topography and Landforms of Ecuador

EXPLANATION The digital elevation model of Ecuador represented in this data set was produced from over 40 individual tiles of elevation data from the Shuttle Radar Topography Mission (SRTM). Each tile was downloaded, converted from its native Height file format (.hgt), and imported into a geographic information system (GIS) for additional processing. Processing of the data included data gap filling, mosaicking, and re-projection of the tiles to form one single seamless digital elevation model. For 11 days in February of 2000, NASA, the National Geospatial-Intelligence Agency (NGA), the German Aerospace Center (DLR), and the Italian Space Agency (ASI) flew X-band and C-band radar interferometry onboard the Space Shuttle Endeavor. The mission covered the Earth between 60?N and 57?S and will provide interferometric digital elevation models (DEMs) of approximately 80% of the Earth's land mass when processing is complete. The radar-pointing angle was approximately 55? at scene center. Ascending and descending orbital passes generated multiple interferometric data scenes for nearly all areas. Up to eight passes of data were merged to form the final processed SRTM DEMs. The effect of merging scenes averages elevation values recorded in coincident scenes and reduces, but does not completely eliminate, the amount of area with layover and terrain shadow effects. The most significant form of data processing for the Ecuador DEM was gap-filling areas where the SRTM data contained a data void. These void areas are a result of radar shadow, layover, standing water, and other effects of terrain, as well as technical radar interferometry phase unwrapping issues. To fill these gaps, topographic contours were digitized from 1:50,000 - scale topographic maps which date from the mid-late 1980's (Souris, 2001). Digital contours were gridded to form elevation models for void areas and subsequently were merged with the SRTM data through GIS and remote sensing image-processing techniques. The data contained in this publication includes a gap filled, countrywide SRTM DEM of Ecuador projected in Universal Transverse Mercator (UTM) Zone 17 North projection, Provisional South American, 1956, Ecuador datum and a non gap filled SRTM DEM of the Galapagos Islands projected in UTM Zone 15 North projection. Both the Ecuador and Galapagos Islands DEMs are available as an ESRI Grid, stored as ArcInfo Export files (.e00), and in Erdas Imagine (IMG) file formats with a 90 meter pixel resolution. Also included in this publication are high and low resolution Adobe Acrobat (PDF) files of topography and landforms maps in Ecuador. The high resolution map should be used for printing and display, while the lower resolution map can be used for quick viewing and reference purposes.

Data Series↗

Irrigation-induced contamination of water, sediment, and biota in the western United States-synthesis of data from the National Irrigation Water Quality Program

In October 1985 the U.S. Department of the Interior (DOI), through the National Irrigation Water Quality Program (NIWQP), began a series of field investigations at 26 areas in the Western United States to determine whether irrigation drainage has had harmful effects on fish, wildlife, and humans or has reduced beneficial uses of water. In 1992 NIWQP initiated the Data Synthesis Project to evaluate data collected during the field investigations. Geologic, climatologic, and hydrologic data were evaluated and water, sediment, and biota from the 26 areas were analyzed to identify commonalities and dominant factors that result in irrigation-induced contamination of water and biota. Data collected for the 26 area investigations have been compiled and merged into a common data base. The structure of the data base is designed to enable assessment of relations between contaminant concentrations in water, sediment, and biota. The data base is available to the scientific community through the World Wide Web at URL http://www.usbr.gov/niwqp. Analysis of the data base for the Data Synthesis included use of summary statistics, factor analysis, and logistic regression. A Geographic Information System was used to store and analyze spatially oriented digital data such as land use, geology and evaporation rates. In the U.S. Department of the Interior (DOI) study areas, samples of water, bottom sediment, and biota were collected for trace-element and pesticide analysis. Contaminants most commonly associated with irrigation drainage were identified by comparing concentrations in water with established criteria. For surface water, the criteria used were typically chronic criteria for the protection of freshwater aquatic life. Because ground water can discharge to the surface where wildlife can be exposed to it, the criteria used for ground water were both the maximum contaminant levels (MCL's) for drinking water and the chronic criteria for the protection of freshwater aquatic life. Data collected by the NIWQP studies indicated that, in surface water, filtered and unfiltered samples had nearly the same concentrations of arsenic, boron, molybdenum, and selenium for concentrations greater than about 10 micrograms per liter. Therefore, in this concentration range, filtered concentrations can be directly compared to biological-effect levels developed for unfiltered samples. In the range of 1 to 10 micrograms per liter there may be a tendency for unfiltered arsenic concentrations to be greater than filtered concentrations. For selenium, however, the data suggest differences from equality in that range result from analytical imprecision and not a general tendency for unfiltered concentrations to be greater than filtered concentrations. This relation may not be true in lentic, nutrient-rich waters because in such settings algae can bioaccumulate large amounts of selenium and other trace elements. Selenium was the trace element in surface water that most commonly exceeded chronic criteria for the protection of freshwater aquatic life; more than 40 percent of the selenium concentrations in surface-water samples exceeded the U.S. Environmental Protection Agency (USEPA) aquatic-life chronic criterion (5 micrograms per liter). In 12 of the 26 areas at least 25 percent of the surface water-samples had selenium concentrations that either equaled or exceeded the chronic criterion (5 micrograms per liter). More than 28 percent of boron concentrations and almost 17 percent of the molybdenum concentrations exceeded the aquatic life criteria established by the State of California (550 and 19 micrograms per liter, respectively). In ground water, more than 22 percent of the arsenic concentrations and more than 35 percent of the selenium concentrations exceeded the MCL (10 and 50 micrograms per liter, respectively). Few samples of uranium in surface water exceeded a criterion for the protection of aquatic life (300 micrograms per liter), but 44 percent

Professional Paper↗

Archive of digital boomer subbottom profile data collected in the Atlantic Ocean offshore northeast Florida during USGS cruises 03FGS01 and 03FGS02 in September and October of 2003

In September and October of 2003, the U.S. Geological Survey (USGS), in cooperation with the Florida Geological Survey, conducted geophysical surveys of the Atlantic Ocean offshore northeast Florida from St. Augustine, Florida, to the Florida-Georgia border. This report serves as an archive of unprocessed digital boomer subbottom profile data, trackline maps, navigation files, Geographic Information System (GIS) files, Field Activity Collection System (FACS) logs, and formal Federal Geographic Data Committee (FGDC) metadata. Filtered and gained (a relative increase in signal amplitude) digital images of the seismic profiles are also provided. Refer to the Acronyms page for expansions of all acronyms and abbreviations used in this report. The USGS St. Petersburg Coastal and Marine Science Center (SPCMSC) assigns a unique identifier to each cruise or field activity. For example, 03FGS01 tells us the data were collected in 2003 as part of cooperative work with the Florida Geological Survey (FGS) and that the data were collected during the first field activity for that project in that calendar year. Refer to http://walrus.wr.usgs.gov/infobank/programs/html/definition/activity.html for a detailed description of the method used to assign the field activity identification (ID). The naming convention used for each seismic line is as follows: yye##a, where 'yy' are the last two digits of the year in which the data were collected, 'e' is a 1-letter abbreviation for the equipment type (for example, b for boomer), '##' is a 2-digit number representing a specific track, and 'a' is a letter representing the section of a line if recording was prematurely terminated or rerun for quality or acquisition problems. The boomer plate is an acoustic energy source that consists of capacitors charged to a high voltage and discharged through a transducer in the water. The transducer is towed on a sled floating on the water surface and when discharged emits a short acoustic pulse, or shot, which propagates through the water, sediment column, or rock beneath. The acoustic energy is reflected at density boundaries (such as the seafloor, sediment, or rock layers beneath the seafloor), detected by hydrophone receivers, and recorded by a PC-based seismic acquisition system. This process is repeated at timed intervals (for example, 0.5 seconds) and recorded for specific intervals of time (for example, 100 milliseconds). In this way, a two-dimensional (2-D) vertical profile of the shallow geologic structure beneath the ship track is produced. Refer to the handwritten FACS operation log (PDF, 442 KB) for diagrams and descriptions of acquisition geometry, which varied throughout the cruises. Table 1 displays a summary of acquisition parameters. See the digital FACS equipment logs (PDF, 9-13 KB each) for details about the acquisition equipment used. The archived trace data are in standard Society of Exploration Geophysicists (SEG) SEG Y (Barry and others, 1975) format (rev. 0), except for the first 3,200 bytes of the card image header, which are stored in ASCII format instead of the standard EBCDIC format. The SEG Y files may be downloaded and processed with commercial or public domain software such as Seismic Unix (SU) (Cohen and Stockwell, 2005). See the How To Download SEG Y Data page for download instructions. The printable profiles provided here are Graphics Interchange Format (GIF) images that were filtered and gained using SU software. Refer to the Software page for details about the processing and links to example SU processing scripts and USGS software for viewing the SEG Y files (Zihlman, 1992).

Florida;Georgia↗

USGS Streamgages Linked to the Medium Resolution NHD

The locations of approximately 23,000 current and historical U.S. Geological Survey (USGS) streamgages in the United States and Puerto Rico (with the exception of Alaska) have been snapped to the medium resolution National Hydrography Dataset (NHD). The NHD contains geospatial information about mapped surface-water features, such as streams, lakes, and reservoirs, etc., creating a hydrologic network that can be used to determine what is upstream or downstream from a point of interest on the NHD network. An automated snapping process made the initial determination of the NHD location of each streamgage. These initial NHD locations were comprehensively reviewed by local USGS personnel to ensure that streamgages were snapped to the correct NHD reaches. About 75 percent of the streamgages snapped to the appropriate NHD reach location initially and 25 percent required adjustment and relocation. This process resulted in approximately 23,000 gages being successfully snapped to the NHD. This dataset contains the latitude and longitude coordinates of the point on the NHD to which the streamgage is snapped and the location of the gage house for each streamgage. A process known as indexing may be used to create reference points (event tables) to the NHD reaches, expressed as a reach code and measure (distance along the reach). Indexing is dependent on the version of NHD to which the indexing is referenced. These data are well suited for use in indexing because nearly all the streamgage NHD locations have been reviewed and adjusted if necessary, to ensure they will index to the appropriate NHD reach. Flow characteristics were computed from the daily streamflow data recorded at each streamgage for the period of record. The flow characteristics associated with each streamgage include: *First date (year, month, day) of streamflow data *Last date (year, month, day) of streamflow data *Number of days of streamflow data *Number of days of non-zero streamflow data *Minimum and maximum daily flow for the period of record (cubic feet per second) *Percentiles (1, 5, 10, 20, 25, 50, 75, 80, 90, 95, 99) of daily flow for the period of record (cubic feet per second) *Average and standard deviation of daily flow for the period of record (cubic feet per second) *Mean annual base-flow index (BFI) computed for the period of record (fraction, ranging from 0 to 1) *Year-to-year standard deviation of the annual base-flow index computed for the period of record (fraction) *Number of years of data used to compute the base-flow index (years) The streamflow data used to compute flow characteristics were copied from the NWIS-Web historical daily discharge archive (nadww01.er.usgs.gov:/www/htdocs/nwisweb/data/discharge) on June 15, 2005.

Data Series↗

Evaluation of stream flow effects on smolt survival in the Yakima River Basin, Washington, 2012-2014

The influence of stream flow on survival of emigrating juvenile (smolts) Pacific salmon Oncorhynchus spp. and steelhead trout O. mykiss is of key management interest. However, few studies have quantified flow effects on smolt migration survival, and available information does not indicate a consistent flow-survival relationship within the typical range of flows under management control. It is hypothesized that smolt migration and dam passage survival are positively correlated with stream flow because higher flows increase migration rates, potentially reducing exposure to predation, and reduce delays in reservoirs. However, available empirical data are somewhat equivocal concerning the influence of flow on smolt survival and the underlying mechanisms driving this relationship. Stream flow effects on survival of emigrating anadromous salmonids in the Yakima Basin have concerned water users and fisheries managers for over 20 years, and previous studies do not provide sufficient information at the resolution necessary to inform water operations, which typically occur on a small spatiotemporal scale. Using a series of controlled flow releases from 2012-2014, combined with radio telemetry, we quantified the relationship between flow and smolt survival from Roza Dam 208 km downstream to the Yakima River mouth, as well as for specific routes of passage at Roza Dam. A novel multistate mark-recapture model accounted for weekly variation in flow conditions experienced by radio-tagged fish. Groups of fish were captured and radio-tagged at Roza Dam and released at two locations, upstream at the Big Pines Campground (river kilometer [rkm] 211) and downstream in the Roza Dam tailrace (rkm 208). A total of 904 hatchery-origin yearling Chinook salmon O. tshawytscha were captured in the Roza Dam fish bypass, radio-tagged and released upstream of Roza Dam. Two hundred thirty seven fish were released in the tailrace of Roza Dam. Fish released in the tailrace of Roza Dam were tagged concurrently with fish released upstream of the dam using identical tagging methods. Tagging and release events were conducted to target a range of flow conditions indicative of flows observed during the typical migration period (March-May) for juvenile spring Chinook salmon in the Yakima River. Three, five and four separate upstream releases were conducted in 2012, 2013, and 2014 respectively, and at least 43 fish were released alive on each occasion. The release sample sizes in 2014 were much larger (~130) compared to previous years for the purpose of increasing precision of survival estimates across the range of flows tested. Migration movements of radio-tagged spring Chinook salmon smolts were monitored with an array of telemetry receiver stations (fixed sites) that extended 208 rkm downstream from the forebay of Roza Dam to the mouth of the Yakima River. Fixed monitoring sites included the forebay of Roza Dam (rkm 208), the tailrace of Roza Dam (rkm 207.9), the mouth of Wenas Creek (rkm 199.2), the mouth of the Naches River (two sites, rkm 189.4), Sunnyside Dam (two sites, rkm 169.1), Prosser Dam (rkm 77.2), and the mouth of the Yakima River (two sites, rkm2 3). This array segregated the study area into four discrete reaches in which survival of tagged fish was estimated. Aerial and underwater antennas were also used to monitor tagged fish at Roza Dam. Aerial antennas were located in the forebay, on the East gate, on the West gate, and in the tailrace of Roza Dam. Underwater antennas were located in the fish bypass, upstream of the East gate, and upstream of the West gate to collect route-specific passage data for tagged fish. Additional years of data collection and analysis could alter or improve our understanding of the influence of flow and other environmental factors on smolt survival in the Yakima River. Nevertheless, during 2012-2014, yearling hatchery Chinook salmon smolt emigration survival was significantly associated with stream flow in the

Report↗