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USGS2026

Dog attacks on wild desert tortoises: A risk model

We retrospectively compiled a database of 6,727 live, wild Agassiz's desert tortoises ( Gopherus agassizii ) and evaluated them for clinical signs of trauma to shell and limbs at 50 sites in the Mojave and Colorado (western Sonoran) deserts of California, USA, spanning the years 1977–2006. Our objectives were to 1) identify tortoises with severe trauma to shell, limbs, and gular horns typically seen in attacks from dogs ( Canis familiaris ); 2) identify locations where severe injuries occurred; and 3) develop a risk model based on distances of tortoises from settlements, towns, or cities. Our models identified multiple variables of importance for tortoises with severe damage to shells, limbs, and gular horns: relative age and sex of tortoises, decades of occurrence, and location. Females and very old tortoises were more vulnerable to attacks than other tortoises. In the decades between the 1970s and 2000s, the risk of severe overall trauma to shell and limbs increased 4 times and to gular horns 16.5 times. Compared to previous decades, by the early 2000s the percent of tortoises with severe trauma increased exponentially the closer a tortoise site was to a settlement; the exponential increase began at approximately 12 km from a settlement. We suggest that the risks may be higher now because of the growth of human populations within the geographic range of the tortoise. The threats to tortoises from dogs are based on whether dogs are off-leash in the Mojave and Colorado deserts.

Arizona, California, Nevada, Utah↗

USGS1994

Hydrogeology and potential effects of changes in water use, Carson Desert agricultural area, Churchill County, Nevada

Operating Criteria and Procedures established in 1988 for delivery of water for irrigation in the Newlands Project area include regulations and methods to increase Project efficiency. Public Law 101-618 of 1990 includes a target of 75-percent Project efficiency and a program of water-rights acquisition for wetlands maintenance. The directives could result in large reductions in water used for irrigation in the Carson Desert, potentially affecting ground-water supplies. Previous studies of the area have been evaluated to determine the current understanding of how aquifers are recharged, what controls the flow and quality of ground water, potential effects of changes in water use, and what additional information would be needed to quantify further changes in water use. Inflow of surface water to the basin from Lahontan Reservoir averaged about 370,000 acre-ft/yr (acre-feet per year) from 1975 to 1992, supplying water for irrigation of more than 50,000 acres. More than half of the water released from the reservoir is lost to seepage, operational spills, and evaporation before delivery of about 170,000 acre-ft/yr to farm headgates. The volume of water delivered to farms that does not contribute to crop consumptive use (on-farm loss) is poorly known but could be as much as 60,000 acre-ft/yr. Consumptive use on irrigated land may be about 180,000 acre-ft/yr, of which 50,000 acre-ft/yr may be derived from the shallow aquifer. Outflow from irrigated land is a mixture of operational spill, runoff from irrigated fields, and ground-water seepage to drains. Total outflow averages about 170,000 to 190,000 acre-ft/yr. This water flows to wetlands at Carson Lake, Stillwater Wildlife Management Area, and Carson Sink. Three sedimentary aquifers were previously defined in the basin: a shallow aquifer having highly variable lithology and water quality, an intermediate aquifer containing principally fresh water, and a deep aquifer having water of poor quality. The deep aquifer could possibly be divided into sedimentary and volcanic zones. In addition, a near-surface zone may exist near the top of the shallow aquifer where vertical flow is inhibited by underlying clay beds. A basalt aquifer near the center of the basin is the source of public supply and is recharged by the shallow, intermediate, and deep aquifers. Water levels in the basalt aquifer have declined about 10 feet from pre-pumping levels, and chloride and arsenic concentrations in the water have increased. The average depth to ground water has decreased beneath large areas of the Carson Desert since 1904 as a result of recharge of surface water used for irrigation. Ground water generally flows from west to east, and dissolvedsolids concentrations increase greatly near areas of ground-water discharge, where State of Nevada drinking-water standards commonly are exceeded. Uncertainties in the rates of recharge to and discharge from the basin cause an imbalance in the calculated water budget. Estimates for total recharge range from 400,000 to 420,000 acreft/yr, whereas estimates for discharge range from 630,000 to 680,000 acre-ft/yr. Estimates of inflow to and outflow from aquifers of the study area are as follows: shallow aquifer, more than 120,000 acre-ft/yr; intermediate aquifer, possibly more than 25,000 acre-ft/yr; deep aquifer, unknown; and basalt aquifer, about 4,000 acre-ft/yr. Estimates for flow volumes to and from the shallow and intermediate aquifers are based on assumed aquifer properties and could be in error by an order of magnitude or more. Conceptual models of the basin show that ground-water flow is downward from the shallow aquifer to the intermediate aquifer in the western part and near the center of the basin, and is upward in the eastern part of the basin. Little is known about flow in the deep aquifer. Nearsurface clay beds inhibit vertical flow near the center and eastern part of the basin except where breached by relict sand-filled channels of the Carson River. Conceptual models of the basin show that changes in water use in the western part of the basin probably would affect recharge to the sedimentary and basalt aquifers. Near the center of the basin, water-use changes could affect the shallow and basalt aquifers but might have less effect on the intermediate aquifer. In the eastern part of the basin, changes could affect the shallow aquifer, but would probably not affect the intermediate or basalt aquifers. If seepage is decreased by lining canals, and land is removed from production, water-level declines in the shallow aquifer could be greater than 10 feet as far as 2 miles from the lined canals. Depending upon the distribution of specific yield, decreasing recharge by 25,000 to 50,000 acre-ft/yr beneath 30,000 acres could cause water levels to decline from 4 to 17 feet. Where ground water supplements crop consumptive use, water levels could temporarily rise when land is removed from production. Where water is pumped from a near-surface zone of the shallow aquifer, water-level declines might not greatly affect pumped wells where the nearsurface zone is thickest, but could cause wells to go dry where the zone is thin. The understanding of surface-water and ground-water relations, recharge and discharge of ground water, ground-water movement, and the potential effects of changes in water use in the Carson Desert can be refined by studying (1) the extent of potable water in the intermediate and basalt aquifers, (2) lithology and specific yield of aquifer materials, (3) data on ground-water levels and quality, and (4) data on surface-water flow and quality, as well as monitoring the effects of changes in water use as they take place.

Nevada↗

USGS1999

Effects on ground-water levels in the Missouri River alluvial aquifer caused by changes in Missouri River stage, Fremont and Monona Counties, Iowa

An analysis of available hydrologic data was conducted to evaluate the effects on groundwater levels in the Missouri River alluvial aquifer caused by changes in Missouri River stage at selected sites in Fremont and Monona Counties in western Iowa. Daily mean ground-water levels and river stage measured during November 1995- September 1996, simulated daily mean river stage for November 1995-December 1996 derived from simulated daily mean discharge for eight alternative water-management plans for the Missouri River, and simulated daily mean ground-water levels for November 1995- December 1996 for selected water-management plans were used in the study. The measured data represent hydrologic conditions for the Current (1998) Water-Control Plan of the U.S. Army Corps of Engineers. Ground-water levels in the alluvial aquifer vary in response to river stage, precipitation, proximity to drainage ditches, evapotranspiration, and pumpage. In Fremont County, measured ground-water levels generally were lower than river stage during the spring, summer, and fall months. In Monona County, measured ground-water levels generally were higher than river stage. Water levels in wells at distances greater than about 8,000 feet from the river in Fremont County and about 6,500 feet in Monona County likely were more affected by precipitation or proximity to drainage ditches than by river stage. Changes in river stage likely affect groundwater levels in Fremont County to a greater degree than in Monona County. In Fremont County, the hydraulic gradient generally is from the river to the aquifer; in Monona County, the gradient generally is from the aquifer to the river. The response of ground- water levels to changes in river stage in Monona County is less apparent than in Fremont County. The higher ground-water levels in Monona County indicate that the effects of other factors, such as differences in recharge from precipitation and aquifer properties, are more dominant than in Fremont County. Generally, the effects of simulated river stage caused higher simulated ground-water levels in Fremont and Monona Counties at distances less than 10,000 feet from the river during the spring months for selected alternatives to the Current Water-Control Plan that target increased benefits to fish and wildlife. Local hydrogeologic conditions will determine how significantly the possible 1- to 4-foot change in ground-water levels affects land use within 10,000 feet of the river. For example, lower river stage and ground-water levels during the mid-summer months could improve drainage in lowland areas during periods of greater-than-normal precipitation. Actual depth to ground water might be controlled by factors other than river stage, such as proximity to drainage ditches and local differences in recharge by precipitation, discharge from evapotranspiration, aquifer properties, and land-surface altitude.

Iowa↗

USGS2021

Ecological disturbance through patch-burn grazing influences lesser prairie-chicken space use

Across portions of the western Great Plains in North America, natural fire has been removed from grassland ecosystems, decreasing vegetation heterogeneity and allowing woody encroachment. The loss of fire has implications for grassland species requiring diverse vegetation patches and structure or patches that have limited occurrence in the absence of fire. The lesser prairie-chicken ( Tympanuchus pallidicinctus ) is a declining species of prairie-grouse that requires heterogeneous grasslands throughout its life history and fire has been removed from much of its occupied range. Patch-burn grazing is a management strategy that re-establishes the fire-grazing interaction to a grassland system, increasing heterogeneity in vegetation structure and composition. We evaluated the effects of patch-burn grazing on lesser prairie-chicken space use, habitat features, and vegetation selection during a 4-year field study from 2014–2017. Female lesser prairie-chickens selected 1- and 2-year post-fire patches during the lekking season, ≥4-year post-fire patches during the nesting season, and year-of-fire and 1-year post-fire patches during post-nesting and nonbreeding seasons. Vegetation selection during the lekking season was not similar to available vegetation in selected patches, suggesting that lesser prairie-chickens cue in on other factors during the lekking season. During the nesting season, females selected nest sites with greater visual obstruction, which was available in ≥4-year post-fire patches; during the post-nesting season, females selected sites with 15–25% bare ground, which was available in the year-of-fire, 1-year post-fire, and 2-year post-fire patches; and during the nonbreeding season they selected sites with lower visual obstruction, available in the year-of-fire and 1-year post-fire patches. Because lesser prairie-chickens selected all available time-since-fire patches during their life history, patch-burn grazing may be a viable management tool to restore and maintain lesser prairie-chicken habitat on the landscape. © 2021 The Wildlife Society.

Kansas↗

USGS1995

Water-quality assessment of the upper Snake River Basin, Idaho and western Wyoming — Summary of aquatic biological data for surface water through 1992

The 35,800-square-mile upper Snake River Basin in eastern Idaho and western Wyoming was one of 20 areas selected for water-quality study under the National Water-Quality Assessment Program. As part of the initial phase of the study, data were compiled to describe the current (1992) and historical aquatic biological conditions of surface water in the basin. This description of natural and human environmental factors that affect aquatic life provides the framework for evaluating the status and trends of aquatic biological conditions in streams of the basins. Water resource development and stream alterations, irrigated agriculture, grazing, aquaculture, and species introductions have affected stream biota in the upper Snake River Basin. Cumulative effects of these activities have greatly altered cold-water habitat and aquatic life in the middle Snake River reach (Milner Dam to King Hill). Most of the aquatic Species of Special Concern in the basin , consisting of eight native mollusks and three native fish species, are in this reach of the Snake River. Selected long-term studies, including comprehensive monitoring on Rock Creek, have shown reduced pollutant loadings as a result of implementing practice on cropland; however, aquatic life remains affected by agricultural land use. Community level biological data are lacking for most of the streams in the basin, especially for large river. Aquatic life used to assess water quality of the basin includes primarily macroinvertebrate and fish communities. At least 26 different macroinvertebrate and fish community metrics have been utilized to assess water quality of the basin. Eight species of macroinvertebrates and fish are recognized as Species of Special Concern. The native fish faunas of the basin are composed primarily of cold-water species representing 5 families and 26 species. An additional 13 fish species have been introduced to the basin. Concentrations of synthetic organic compounds and trace-element contaminants in whole fish collected in the basin during 1970-90 generally did not exceed National Academy of Sciences and National Academy of Engineering concentration guidelines or the 1980-81 geometric mean concentrations from samples collected as part of the U.S. Fish and Wildlife Service National Contaminant Biomonitoring Program. Currently, there are no State fish consumption advisories on any streams in the basin, The organochlorine compounds DDT and PCB's were the most frequently detected fish tissue contaminant. Selected long-term data on DDT, its metabolites, and PCB's indicate decreasing concentrations of these compounds. Arsenic, mercury, and selenium were slightly elevated compared with nationwide baseline concentrations and may indicate bioaccumularion in the food chain. Concentrations of most other trace elements in fish tissue were below levels of concerns for the protection of humans and wildlife.

Idaho, Wyoming↗

USGS2021

Seasonal variation in resource selection by subadult golden eagles in the Great Basin Desert

Golden eagles Aquila chrysaetos are a long-lived and wide-ranging species believed to be stable or in slight decline across North America. Golden eagles have an extended subadult stage (4–5 years) that is critical to maintaining recruitment into the breeding population and population viability. Compared to adult golden eagles, the ecology of subadult golden eagles (hereafter, subadults) has received little attention. We investigated patterns of resource selection for subadults in the Great Basin Desert of the western United States during summer and winter, 2013–2019. We monitored 46 subadults with GPS transmitters and related locations (n = 99 037) with predictors hypothesized to influence seasonal patterns of space use with mixed-effects logistic regression. Subadults selected for ridges and upper slopes in summer and winter, but higher elevations in summer. Subadults showed weak selection for lower ridge density in summer, which was likely facilitated by selection for areas with greater thermal wind current potential. In contrast, subadults showed strong selection for higher ridge density in winter. Subadults selected areas further from roads in summer and closer to roads and electrical transmission lines in winter, which may be related to winter scavenging of road-killed ungulates. Resource selection functions suggested subadults selected for shrublands and woodlands in both seasons, but odds ratios revealed that during winter subadults avoided shrublands and increased selection of woodlands relative to summer. Subadults selected for areas with infrequent fires in both seasons; areas with frequent fires were avoided in summer but selected for in winter. Seasonal changes in resource selection suggested that subadults used woodlands more than expected, potentially reflecting spatial partitioning by subadults to lower-quality habitats to minimize competition with breeding adults during winter when energetic demands for thermoregulation were presumably higher and prey more limited.

Utah↗

USGS1986

Mid-winter food use and body weights of mallards and wood ducks in Mississippi

We obtained esophageal food samples from 311 mallards (Anas platyrhynchos) and 94 wood ducks (Aix sponsa) and body weights from 2,118 mallards and 315 wood ducks in western Mississippi during December and January 1979-83. On average, mallards ingested 3.0% animal food, principally aquatic invertebrates, and 97.0% plant food. Rice, soybeans, and seeds of 'moist soil' plants provided 41.3, 41.6, and 10-11% of the total food intake. Wood ducks ingested nearly 100% plant food, of which 23.4% was soybeans and 74.3% was acorns from Nuttall (Quercus nuttallii), water (Q. nigra), and willow oaks (Q. phellos). Mallard food use varied with water conditions; the use of rice decreased and soybeans increased during 1980-81 when cumulative November-January precipitation was < 50% of normal. Wood duck food use varied with habitat; the diet included more acorns at sites having larger acreages of intact bottomland hardwood forest. Mallard and wood duck body weights varied within and among winters. Mallard weights decreased by about 2% from December to January each year. We considered this a regulated loss, whereas we attributed increases and decreases of 4-5% in average weights during wet and dry winters to changes in feeding opportunities associated with winter precipitation. Wood duck weights followed similar trends. We concluded that continued drainage in the Mississippi Delta will adversely affect waterfowl foraging opportunities, and that research on winter feeding ecology will progress more rapidly if we develop an understanding of the foraging efficiencies associated with alternate food resources.

Mississippi↗

USGS2009

Hydrology of the Johnson Creek Basin, Oregon

The Johnson Creek basin is an important resource in the Portland, Oregon, metropolitan area. Johnson Creek forms a wildlife and recreational corridor through densely populated areas of the cities of Milwaukie, Portland, and Gresham, and rural and agricultural areas of Multnomah and Clackamas Counties. The basin has changed as a result of agricultural and urban development, stream channelization, and construction of roads, drains, and other features characteristic of human occupation. Flooding of Johnson Creek is a concern for the public and for water management officials. The interaction of the groundwater and surface-water systems in the Johnson Creek basin also is important. The occurrence of flooding from high groundwater discharge and from a rising water table prompted this study. As the Portland metropolitan area continues to grow, human-induced effects on streams in the Johnson Creek basin will continue. This report provides information on the groundwater and surface-water systems over a range of hydrologic conditions, as well as the interaction these of systems, and will aid in management of water resources in the area. High and low flows of Crystal Springs Creek, a tributary to Johnson Creek, were explained by streamflow and groundwater levels collected for this study, and results from previous studies. High flows of Crystal Springs Creek began in summer 1996, and did not diminish until 2000. Low streamflow of Crystal Springs Creek occurred in 2005. Flow of Crystal Springs Creek related to water-level fluctuations in a nearby well, enabling prediction of streamflow based on groundwater level. Holgate Lake is an ephemeral lake in Southeast Portland that has inundated residential areas several times since the 1940s. The water-surface elevation of the lake closely tracked the elevation of the water table in a nearby well, indicating that the occurrence of the lake is an expression of the water table. Antecedent conditions of the groundwater level and autumn and winter precipitation totals were used to anticipate flooding of Holgate Lake. Several factors affect annual mean flow of Johnson Creek. More precipitation falls in the southeastern area of the basin because of the topographic setting. Runoff from much of the northern and western areas of the basin does not flow into Johnson Creek due to permeable deposits, interception by combined sewer systems, and by groundwater flow away from Johnson Creek. Inflow from Crystal Springs Creek accounts for one-half of the increase in streamflow of Johnson Creek between the Sycamore and Milwaukie sites. Low flows of Johnson Creek vary as a result of fluctuations in groundwater discharge to the creek, although past water uses may have decreased flows. The groundwater contributions to streamflow upstream of river mile (RM) 5.5 are small compared to contributions downstream of this point. Comparison of flows to a nearby basin indicates that diversions of surface water may have resulted in a 50 percent decrease in low flows from about 1955 to 1977. Runoff from the drainage basin area upstream of the Johnson Creek at Sycamore site contributes more to peak streamflow and peak volume than the drainage basin area between the Sycamore and Milwaukie sites. The average increase in annual peak streamflow and annual peak volume between the two sites was 11 and 24 percent, respectively. Decreased contribution in the lower area of the drainage basin is a result of infiltration, interception by drywell and combined sewer systems, and temporary overbank storage. Trends in flow typically associated with increasing urban development were absent in Johnson Creek. Annual, low, and high flows showed no trend from 1941 to 2006. Much of the infrastructure that may affect runoff from agricultural, residential, and urban development was in place prior to collection of hydrologic data in the basin. Management of stormwater in the urban areas by routing runoff from impervious surfaces to dry

Oregon↗

USGS2016

Investigating impacts of oil and gas development on greater sage-grouse

The sagebrush ( Artemisia spp.) ecosystem is one of the largest ecosystems in western North America providing habitat for species found nowhere else. Sagebrush habitats have experienced dramatic declines since the 1950s, mostly due to anthropogenic disturbances. The greater sage-grouse ( Centrocercus urophasianus ) is a sagebrush-obligate species that has experienced population declines over the last several decades, which are attributed to a variety of disturbances including the more recent threat of oil and gas development. We developed a hierarchical, Bayesian state-space model to investigate the impacts of 2 measures of oil and gas development, and environmental and habitat conditions, on sage-grouse populations in Wyoming, USA using male lek counts from 1984 to 2008. Lek attendance of male sage-grouse declined by approximately 2.5%/year and was negatively related to oil and gas well density. We found little support for the influence of sagebrush cover and precipitation on changes in lek counts. Our results support those of other studies reporting negative impacts of oil and gas development on sage-grouse populations and our modeling approach allowed us to make inference to a longer time scale and larger spatial extent than in previous studies. In addition to sage-grouse, development may also negatively affect other sagebrush-obligate species, and active management of sagebrush habitats may be necessary to maintain some species.

Wyoming↗

USGS2013

Vegetation projections for Wind Cave National Park with three future climate scenarios: Final report in completion of Task Agreement J8W07100052

Introduction The effects of climate change on the natural resources protected by Parks will likely be substantial, but geographically variable, due to local variation in climate trajectories and differences among ecosystems in their vulnerability to climate change. The projections of general circulation models (GCMs) indicate the possible magnitude and direction of future climate change for a region, but the utility of these projections for more local scales, those of individual National Park Service (NPS) units, are more uncertain because the coarse-scale GCMs lack much of the topographic detail that alters local climates. In addition, complex, interacting effects of temperature, precipitation, atmospheric CO 2 concentrations, fire, and herbivores on the vegetation that is the foundational natural resource of many NPS units present challenges in assessing the effects of projected future climates on plant and animal assemblages managed by the NPS. In spring 2009, Wind Cave National Park (WICA) served as a case study in a workshop assessing the use of scenario planning as a tool for park management planning in the face of rapidly changing climate. One outcome of the workshop was the recognized need for quantitative models to better understand the range of possible vegetation changes under different future climates and management decisions. This report addresses this need; it describes our adaptation of a dynamic global vegetation model (DGVM) to WICA vegetation and the resulting projections of future vegetation under three future climate scenarios and 11 management scenarios determined by Park natural resource managers. Wind Cave National Park lies along a narrow transition zone between the ponderosa pine (Pinus ponderosa) forests of the Black Hills and the mixed grass prairie that once extended with few interruptions over the lower, gentler terrain, subject to warmer, drier climate to the east and south of the Park. The location and character of this transition is strongly influenced by fire frequency and intensity (Brown and Sieg 1999). Furthermore, the mixed grass prairie occupies a broader transition zone between eastern tallgrass prairie and the shortgrass prairie of the western Great Plains. The dominance of species characteristic of these two prairie types varies with soil moisture availability, evaporative demand, and recent grazing history (Cogan et al. 1999). In addition, Wind Cave lies near the midpoint of a long gradient of C 3 (cool season) grass dominance to the north and C 4 (warm season) grass dominance to the south. The ecotonal position of WICA may make it particularly sensitive to climate change. For example, small changes in fire frequency and/or intensity and the vigor of trees vs. grass could dramatically shift the proportions of these two lifeforms. The Park hydrology is also sensitive to changes in the balance between infiltration of precipitation and evapotranspiration, as on average, only a small fraction of annual precipitation reaches the deeper soil layers that feed permanent streamflow. The resources at risk at Wind Cave NP include the Cave itself, as well as small backcountry caves, a genetically important bison herd, and other prairie species including the black-tailed prairie dog and endangered black-footed ferrets. All of these resources will be directly affected by climate change impacts on vegetation and hydrology. Natural resource management challenges at WICA are substantial, diverse, and intertwined. Aboveground, the park has been recognized as exemplary for its high quality vegetation (Marriot et al. 1999), though the park is relatively small for the diversity of vegetation types and species that it supports. Even without a changing climate, maintaining the integrity of the plant communities is complicated by the park’s legislated responsibility to maintain viable populations of bison, elk and pronghorn. In addition, the federally endangered black-footed ferret was recently re-introduced to the park. This species requires large extents of prairie dog towns for prey and habitat. Prairie dogs impact vegetation by constant clipping, grazing and soil disturbance, thereby affecting plant composition and productivity. Moreover, naturally high interannual climate variability and the strong influence of precipitation on grass productivity in this region combine to yield high interannual variability in the amount of forage available for the wildlife that the park is tasked to maintain. Finally, fire, which is now primarily controlled by WICA and NPS Northern Great Plains fire management programs, is intertwined with all other natural resource issues at WICA, as it can impact prairie dog colony and forest expansion, ungulate foraging behavior, invasive plant species, and hydrological processes. Although not capable of capturing all of these complexities, dynamic vegetation models do provide a means for quantitatively projecting vegetation futures in future climates under plausible fire and grazing regimes. Our work uses the DGVM MC1 to simulate the effects of future climate projections and management practices on the vegetation of WICA. MC1 is designed to project potential vegetation as influenced by natural processes and hence is appropriate for national parks, where conservation of native biota and ecosystems is of great importance. Since the initial application of MC1 to a small portion of WICA (Bachelet et al. 2000), the model has been altered to improve model performance with the inclusion of dynamic fire. Applying this improved version to WICA required substantial recalibration, during which we have made a number of improvements to MC1 that will be incorporated as permanent changes. In this report we document these changes and our calibration procedure following a brief overview of the model. We compare the projections of current vegetation to the current state of the park and present projections of vegetation dynamics under future climates downscaled from three GCMs selected to represent the existing range in available GCM projections. In doing so, we examine the consequences of different management options regarding fire and grazing, major aspects of biotic management at Wind Cave.

South Dakota↗

USGS2012

Resource selection models are useful in predicting fine-scale distributions of black-footed ferrets in prairie dog colonies

Wildlife-habitat relationships are often conceptualized as resource selection functions (RSFs)—models increasingly used to estimate species distributions and prioritize habitat conservation. We evaluated the predictive capabilities of 2 black-footed ferret ( Mustela nigripes ) RSFs developed on a 452-ha colony of black-tailed prairie dogs ( Cynomys ludovicianus ) in the Conata Basin, South Dakota. We used the RSFs to project the relative probability of occurrence of ferrets throughout an adjacent 227-ha colony. We evaluated performance of the RSFs using ferret space use data collected via postbreeding spotlight surveys June–October 2005–2006. In home ranges and core areas, ferrets selected the predicted "very high" and "high" occurrence categories of both RSFs. Count metrics also suggested selection of these categories; for each model in each year, approximately 81% of ferret locations occurred in areas of very high or high predicted occurrence. These results suggest usefulness of the RSFs in estimating the distribution of ferrets throughout a black-tailed prairie dog colony. The RSFs provide a fine-scale habitat assessment for ferrets that can be used to prioritize releases of ferrets and habitat restoration for prairie dogs and ferrets. A method to quickly inventory the distribution of prairie dog burrow openings would greatly facilitate application of the RSFs.

South Dakota↗

USGS1999

The 1992 epizootic of Newcastle disease in double-crested cormorants in North America

In the summer of 1992, morbidity and mortality in juvenile double-crested cormorants (Phalacrocorax auritus; DCC) attributable to Newcastle disease virus (NDV) was observed for the first time in seven northern USA states and one Canadian province, and recurred in three western Canadian provinces. Based on clinical signs and laboratory diagnostic findings, DCC mortality from NDV occurred in 59 of the 63 nesting colonies and two of three non-colony sites investigated. An estimate of in excess of 20,000 DCC died, with mortality rates ranging from < 1 to 37% in Great Lakes colonies to 20 to 92% in Minnesota (USA) and North and South Dakota (USA) colonies. Sick juvenile white pelicans (Pelecanus erythrorhynchos) exhibiting signs similar to sick cormorants, and dead pelicans were observed in Minnesota and North Dakota. Mortality rates in pelican colonies were as high as in the adjacent cormorant colonies, but no cause for the mortality of an estimated 5,000 pelicans was determined. No evidence of NDV was found in other species nesting in proximity to affected cormorants. Although the source of the NDV infection is unknown in cormorants, the simultaneous onset of the epizootics in juvenile birds over a wide geographic area implies that the virus was acquired by adults prior to migration and was carried back to nest sites, exposing susceptible nestlings. The possible transmission of this virus from free-ranging wild birds to domestic poultry is a concern. Based on repeated epizootics in cormorants since 1990, NDV seems to be established in DCC.

Journal of Wildlife Diseases↗

USGS2023

Ring-necked Pheasant brood habitat selection and movements in an intensive agricultural landscape

Management of row crops can greatly influence wildlife populations in an agriculturally intensive landscape. Many upland gamebird populations, including Phasianus colchicus L. (Ringnecked Pheasant; hereafter pheasant) are experiencing contemporary population declines in such landscapes throughout the Midwest United States. Reduced availability of quality brood habitat may be a factor in these declines. Alternative practices, such as spring cover crops, may increase brood survival and benefit local pheasant populations. Our objectives were to follow radio-tagged females and assess pheasant brood 1) movements among available habitat patches within landscapes including spring cover crops and Conservation Reserve Program (CRP) fields, 2) relative use of available cover types within a landscape, 3) selection of vegetation structure, vegetation composition, and invertebrate community structure by brood-rearing hens in landscapes dominated by row-crop agriculture, and 4) survival rates. Broods were found primarily in grassy areas (native grass, pasture, train track right-of-way, and grass strips) and spring cover crop fields even though cover crops were the least common cover type in all study areas. Brood movements were limited with broods staying near nest locations for 30 days after hatch. Though movements were small, broods were found in multiple cover types, averaging 2.8 out of 6 available cover types. There was no difference between used and random locations for invertebrate metrics including total counts, biomass, and richness; order-specific biomass; and order-specific counts. Visual obstruction and vegetation composition were similar between used and random locations. Across our study sites, we found little support for point-site selection (i.e., within-patch 4th order selection) but significant support for patch-site selection by female pheasants attending broods. Spring cover crops (<5%) and CRP (<15%) comprised a small percentage of the landscape area, but were selected by females attending broods as each contained approximately 25% of brood locations. Apparent survival of pheasant broods was low compared to other studies. Female pheasants selected for spring cover crops and CRP when attending broods, both are alternatives to current row-crop farming practices. As pheasants continue to respond to changes in western Kansas landscapes, homogeneity of cover types found in agricultural landscapes can be detrimental if practices continue to shift from quality pheasant habitat but can be advantageous if practices shift towards favorable management practices.

Kansas↗

USGS2011

Survey of invasive ants at Hakalau Forest National Wildlife Refuge

We conducted a survey for invasive ants at Hakalau Forest National Wildlife Refuge, Hawai‘i Island, during 2009–2010 to evaluate potential threats to native arthropod communities and food webs. The focal area of the survey was the upper portion of the Hakalau Unit of the refuge, where native forest was being restored in abandoned cattle pastures. This area, between 1575 and 1940 m elevations, contained much alien kikuyu grass (Pennisetum clandestinum), but koa (Acacia koa) trees and other native species that were planted in the past 20 years were rapidly filling in the pasture. We surveyed for ants at predetermined points along roads, fences, and corridors of planted koa. Sampling methods primarily consisted of hand searching and pitfall traps, but bait cards were used additionally in some instances. Our results indicated that a single species, Cardiocondyla kagutsuchi, was widespread across the upper portion of the refuge. Cardiocondyla kagutsuchi seemed absent, or at least rare, in areas of tall, dense grass. Due to the undulating topography of the area, however, the dense grass cover was interspersed with outcroppings of exposed, gravelly soil. Presumably due to warming by the sun, many of the outcropped habitats supported colonies of C. kagutsuchi. We did not detect ants in the old-growth forest below the abandoned pastures, presumably because microhabitat conditions under the forest canopy were unsuitable. Although ecological impacts of C. kagutsuchi have not been reported, they may be limited by the small size of the ant, the relatively small size of colonies, and the apparent preference of the ant for disturbed areas that are dominated by alien species. Notably, our survey of Keanakolu-Mana Road between the Observatory Road (John A. Burns Way) and the town of Waimea detected a population of Argentine ants (Linepithema humile) approximately 5.1 km north of the Maulua Section of the refuge. We also surveyed for ants on the Kona Forest Unit of the refuge. This small survey focused on approximately 14 km of roads located below about 1600 m elevation. We found two species, Solenopsis papuana and Nylanderia bourbonica. Solenopsis papuana was more widespread, being found along the southern, northern, and western boundaries, while N. bourbonica was detected only at 790 m elevation on the southern boundary. Of the two species, S. papuana seemed more likely to affect native arthropod communities due to its tendency to form relatively large, aggressive colonies and its ability to inhabit intact mesic and wet forests below 1100 m elevation. In contrast, the restriction of N. bourbonica to disturbed habitats indicated a reduced threat to native arthropod communities. Our results on the Kona Forest Unit corroborated those of a study conducted during 1999–2000, although the earlier study was more intensive over time and yielded small numbers of two additional species, Cardiocondyla wroughtonii and Tetramorium bicarinatum, both of which were detected below 792 m elevation along the southern boundary.

Hawaii↗

USGS1966

Breeding ecology of the redhead duck in western Montana

The habits of the redhead duck ( Aythya americana ) were studied in the Flathead Valley of western Montana in 1960 and 1961 to determine their habitat preferences in this pothole breeding ground. The 2,600-acre study area, surrounding the Ninepipe Reservoir, contained 686 potholes. Redheads usually were paired by the time they arrived on the study area in March. The average density of redhead breeding pairs was 25 pairs per square mile. For all spring activities except nesting, the birds used large, deep, open potholes or breeding-pair potholes. The several breeding-pair potholes and the nesting pothole utilized by the pair comprised their home range. Starting in late April, the pairs moved about the home range as the hens selected nesting sites, usually in the dense emergent vegetation of small, shallow potholes. Hard-stem bulrush ( Scirpus acutus ) and cat-tail ( Typha latifolia ) were preferred nesting cover. Redhead nesting success was only 15 percent, a low rate apparently caused by degenerate nesting behavior complicated by high redhead density, a lack of suitable nest hosts, and certain habitat deficiencies. By late June most drakes and unsuccessful hens had moved from the potholes to nearby reservoirs. All successful hens led their newly hatched broods from the nesting potholes to larger brood potholes and many eventually moved to the reservoir. By mid-July virtually all redheads had moved from the potholes to the reservoirs, where they remained until fall migration.

Montana↗

USGS2018

Duck nest depredation, predator behavior, and female response using video

Depredation plays an important role in determining duck nest success and predator and female duck behavior during nest depredation can influence nest fate. We examined depredation of mallard ( Anas platyrhynchos ) and gadwall ( A. strepera ) nests in Suisun Marsh, California, USA, in 2015–2016 with continuous infrared video monitoring to identify nest predators and characterize predator and female duck behavior during depredation events. We recorded predators at 44% of 147 nests monitored. Raccoons ( Procyon lotor ) were the most frequent predator observed at nests (40% of nests visited and 53% of depredated eggs) followed by striped skunks ( Mephitis mephitis ; 27% and 27%), coyotes ( Canis latrans ; 4% and 9%), common ravens ( Corvus corax ; 4% and 9%), gopher snakes ( Pituophis catenifer catenifer ; 19% and 0%), and western yellow‐bellied racers ( Coluber constrictor mormon ; 1% and 0%). The number of eggs depredated per depredation bout varied among predators (raccoons: 7.3 eggs; skunks: 2.5; coyotes: 7.4; ravens: 7.7; and snakes: 0.0). Mammal depredation occurred between 1600 and 0400, whereas snakes and ravens were observed at nests during the day (snakes: 1000–2100; ravens: 1700). Females flushed from nests immediately before predator arrival ( = 29.0 ± 16.6 [SD] sec), and this timing did not vary among predators. However, the length of nest depredation bouts varied among predators. Nest visits by gopher snakes were longer (18.6 ± 19.4 min) than depredation bouts by other predators (12.3 ± 10.7 min), but snakes did not successfully consume any eggs. Females took more time to return to nests when nests were depredated by raccoons (239 ± 137 min), whereas females returned more quickly when nests were visited by skunks (81 ± 163 min) or gopher snakes (15 ± 128 min). Partial clutch depredation occurred at 15% of depredated nests, but only 23% of partially depredated nests successfully hatched ≥1 egg. Our results indicate that predator type and behavior can influence female behavior and nest fate, and that management actions that reduce the effectiveness of raccoons and skunks encountering waterfowl nests may benefit these nesting populations.

Journal of Wildlife Management↗

USGS1994

Reconnaissance investigation of water quality, bottom sediment, and biota associated with irrigation drainage in the Owyhee and Vale Projects, Oregon and Idaho, 1990-91

A reconnaissance investigation was conducted during 1990--91 in the Owyhee and Vale projects in eastern Oregon and southwestern Idaho, as well as at a number of sites in the Snake River and tributaries to the Snake River in the area of study. The objective of the study was to determine if agricultural drainwater entering the study area was causing, or had the potential to cause, significant harmful effects to human health, fish and wildlife, or may adversely affect the suitability of water for beneficial uses. Approximately 153,000 acres of land are irrigated annually within the areas of the Owyhee and Vale projects. Large quantities of water are required because of the semiarid climate and relatively high evaporation rates. Several reservoirs in the area are filled annually during the wet, nonirrigation season to sustain irrigation during the dry summer months. During the irrigation season, this impounded water, along with direct diversions from the Malheur, Owyhee, and Snake Rivers, is transported to the irrigated areas through a series of diversion tunnels, siphons, canals, aqueducts, ditches, and drains. Major crops grown in the area include sugar beets, alfalfa hay and other hay crops, onions, and winter wheat. Minor crops include corn, potatoes, mint, various seed crops, and fruit. In 1987, it was estimated that the following amounts of pesticides were used in the project areas: 2,4-D (21,000 lbs [pounds]), chlorpyrifos (1,000 lbs), dacthal (40,000 lbs), dicamba (320 lbs), endosulfan (2,500 lbs), ethion (11,000 lbs), malathion (24,000 lbs), parathion (5,000 lbs), and phorate (11,000 lbs). Median concentrations and values for total dissolved solids, alkalinity, sodium adsorption ratio, and hardness in the Vale project area were greater than 1.5 times those values observed in the Owyhee project area or at other Snake River locations. During irrigation (August 1990), total dissolved solids, alkalinity, sodium adsorption ratio, and hardness values increased in a downstream manner. Constituent values at drainwater sites generally were comparable to concentrations below the irrigated ureas in the Owyhee and Vale project areas. The trace elements arsenic, boron, copper, molybdenum, vanadium, and zinc were detected in most water samples; cadmium, chromium, lead, and selenium were detected in some samples at concentrations generally near the analytical reporting limit; mercury was not detected in any samples. In some water samples, concentrations of arsenic, boron, cadmium, copper, and lead exceeded State or Federal water-quality standards or criteria. Most trace elements in bottom sediment were detected at concentrations within the expected 95-percent baseline range for soils from the Western United States. Concentrations that exceeded the 95-percent baseline range for study area soils were: (1) arsenic and lead in one sample from a site in the Vale project area; (2) mercury, lead, and tin in one sample from a site in the Snake River system; (3) manganese in two samples from two sites in the Snake River system; and (4) manganese from one sample from a site in the Vale project area. Fifteen pesticides and metabolites were detected in whole-water samples collected from sites in the study area. DDT, plus its metabolites (DDE and DDD), dieldrin, endrin, 2,4-D, dicamba, and dacthal were detected in samples collected from seven or more sites. Other pesticides detected included chlorpyrifos, endosulfan, ethion, malathion, parathion, phorate, and lindane. Most of the detected pesticide concentrations generally were largest in drainwater and at the most downstream sampling locations in the Owyhee and Vale project areas. Concentrations exceeded water-quality criteria established for the protection of freshwater aquatic life in 86 percent of the whole-water samples analyzed for DDT plus its metabolites, 71 percent of the dieldrin samples, 14 percent of the endrin samples, and 10 percent of the parathion samples. Eight pesticides and

Water-Resources Investigations Report↗

USGS2020

Using ultrasonic acoustics to detect cryptic flying squirrels: Effects of season and habitat suitability

New technologies allow for more efficient and effective monitoring of rare or elusive species. However, standardizing protocol to ensure high detection rates is important prior to widespread use of a new technique. The use of ultrasonic acoustic detectors to survey for flying squirrels ( Glaucomys spp.) is a novel method that is more efficient than traditional methods. However, certain methodologies for this technique still need to be refined. During 2015, we conducted a seasonal and habitat quality study on the endangered Carolina northern flying squirrel ( G. sabrinus coloratus ) in western North Carolina, USA. Our seasonal study examined differences in probability of detection (POD) and latency to detection (LTD) at 30 high-quality sites across 10 survey nights in spring, summer, and autumn. The habitat quality study focused on POD and LTD among 15 sites with varying habitat quality (5 High, 5 Medium, 5 Low) across 20 survey nights. We found POD similar between seasons, with POD 15–20% greater during spring. The LTD was comparable among seasons. We found that POD and LTD varied at sites with different habitat quality. The POD was similar between High and Medium sites (0.26 ± 0.04 SE and 0.29 ± 0.05, respectively), but greater than Low sites (0.02 ± 0.02). The LTD was not different among sites with differing habitat quality, although LTD at High sites was 2.7 and 4.5 times lower than Medium and Low sites, respectively. Trill calls, the most distinctive species-specific call type produced by species of flying squirrels, was recorded at greater rates in spring versus other times of the year. Our results indicate flying squirrels can be surveyed during any season, although habitat quality needs to be considered when determining survey length. For Carolina northern flying squirrel, the optimal time to perform acoustic surveys is during the spring season for 6–10 survey nights at sites with high or medium habitat quality.

North Carolina↗