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USGS2001

South China Sea

The South China Sea is poorly understood in terms of its marine biota, ecology and the human impacts upon it. What is known is most often contained in reports and workshop and conference documents that are not available to the wider scientific community. The South China Sea has an area of some 3.3 million km 2 and depths range from the shallowest coastal fringe to 5377 m in the Manila Trench. It is also studded with numerous islets, atolls and reefs many of which are just awash at low tide. It is largely confined within the Tropic of Cancer and, therefore, experiences a monsoonal climate being influenced by the Southwest Monsoon in summer and the Northeast Monsoon in winter. The South China Sea is a marginal sea and, therefore, largely surrounded by land. Countries that have a major influence on and claims to the sea include China, Malaysia, the Philippines and Vietnam, although Thailand, Indonesia and Taiwan have some too. The coastal fringes of the South China Sea are home to about 270 million people that have had some of the fastest developing and most vibrant economies on the globe. Consequently, anthropogenic impacts, such as over-exploitation of resources and pollution, are anticipated to be huge although, in reality, relatively little is known about them. The Indo-West Pacific biogeographic province, at the centre of which the South China Sea lies, is probably the world's most diverse shallow-water marine area. Of the three major nearshore habitat types, i.e., coral reefs, mangroves and seagrasses, 45 mangrove species out of a global of 51, most of the currently recognised 70 coral genera and 20 of 50 known seagrass species have been recorded from the South China Sea. The island groups of the South China Sea are all disputed and sovereignty is claimed over them by a number of countries. Conflicts have in recent decades arisen over them because of perceived national rights. It is perhaps because of this that so little research has been undertaken on the South China Sea. What data are available, however, and if Hong Kong is used , as it is herein, as an indicator of what the perturbations of other regional cities upon the South China Sea are like, then it is impacted grossly and an ecological disaster has probably already, but unknowingly, happened.

Marine Pollution Bulletin↗

USGS2018

Interisland genetic structure of two endangered Hawaiian waterbirds: The Hawaiian Coot and Hawaiian Gallinule

Most of Hawaii's endemic avifauna are species of conservation concern. Some of Hawaii's endangered waterbirds, however, have increased in number as a result of intensive management of wetlands. To inform these conservation efforts, we examined interisland genetic structure and gene flow within 2 Hawaiian endemic waterbirds, the Hawaiian Coot ( Fulica alai ) and the Hawaiian subspecies of the Common Gallinule ( Gallinula galeata sandvicensis ), using microsatellite and mitochondrial loci. Hawaiian Coots and Hawaiian Gallinules occupy coastal wetlands and exhibit similar life history characteristics and generation times, although they may differ in dispersal propensity. Mark–resight data for Hawaiian Coot indicate interisland movements, whereas Hawaiian Gallinules are sedentary. Genetic diversity is partitioned across the landscape differently for Hawaiian Coots and Hawaiian Gallinules; patterns of variation are likely influenced by behavioral and ecological mechanisms. Hawaiian Coots exhibit low levels of structure at microsatellite loci ( F ST = 0.029) and high levels of gene flow among islands. Conversely, Hawaiian Gallinules are highly structured across marker types (microsatellite F ST = 0.205, mtDNA control region F ST = 0.370, mtDNA ND2 F ST = 0.087), with restricted recent gene flow. Patterns of gene flow have changed after the population declines in the early to mid-1900s. Gene flow estimates indicate historical dispersal from Kauai to Oahu in both species, while recent estimates show individual Hawaiian Coots dispersing from Oahu and restricted gene flow between islands for the Hawaiian Gallinule. Changes in gene flow through time suggest that patterns of dispersal may be an artifact of the availability of habitat, which may be indirectly associated with the synergistic influences of population density and wetland quality. Despite recent population size increases for both species, continued threats to Hawaiian waterbirds (i.e. nonnative mammalian predators and invasive plants, avian disease, altered hydrology, and saltwater inundation of freshwater wetlands) will likely require continued active management to maintain viable populations.

Hawaii↗

USGS2014

Isotopic nitrogen in fecal fiber as an indicator of winter diet in caribou and muskoxen

RATIONALE: The ratios of stable nitrogen isotopes (δ 15 N values) in excreta have been used to examine aspects of trophic and nutritional ecology across taxa. Nitrogen fractions in feces of herbivores include endogenous (e.g., sloughed intestinal cells, unresorbed digestive secretions, and microbial debris) and dietary sources. For animals such as large herbivores, that have diets and feces with high concentrations of indigestible ﬁber, endogenous 15 N may constrain the use of fecal δ 15 N values to estimate dietary δ 15 N values and reconstruct diets. METHODS: We compared two techniques (detergent and detergent-free) to isolate fractions of plant ﬁbers in the forages of caribou ( Rangifer tarandus ) and muskoxen ( Ovibos moschatus ); estimated the discrimination factors between the δ 15 N values of fecal ﬁber residues and of the diets of captive animals; and used the more effective isotopic tracer of dietary δ 15 N values to examine the relationships between the δ 15 N values of fecal residues and diet composition in several populations of wild caribou and muskoxen throughout North America in winter. RESULTS: The detergent-based approach contaminated the fractions of plant ﬁbers in forages and feces with 14 N, whereas the detergent-free method was a good proxy to estimate δ 15 N values of plant ﬁbers (r 2 = 0.92) and provided a better estimate of the fecal-ﬁber to diet discrimination factor for both species (caribou = 3.6‰; muskoxen = 2.8‰). In wild populations, the δ 15 N values of fecal ﬁbers reﬂected diet composition in muskoxen (adjusted R 2 = 0.43) but not caribou (adjusted R 2 = 0.06). CONCLUSIONS: Contamination from detergent residues prohibited the use of detergent extraction in isolating forage 15 N from endogenous 15 N in the feces of herbivores. Although δ 15 N values in fecal ﬁbers can be used to track dietary δ 15 N values in wild herbivores, discrimination between fecal extracts and diet may vary with the contribution of endogenous nitrogen (N), and, therefore, residual endogenous 15 N in feces may limit dietary reconstructions from fecal δ 15 N values for some large herbivores.

Alaska↗

USGS2016

Ecological requirements for pallid sturgeon reproduction and recruitment in the Missouri River—A synthesis of science, 2005 to 2012

This report is intended to synthesize the state of the scientific understanding of pallid sturgeon ecological requirements to provide recommendations for future science directions and context for Missouri River restoration and management decisions. Recruitment of pallid sturgeon has been low to non-existent throughout its range. Emerging understanding of the genetic structure of pallid sturgeon populations sets a broad framework for species and river management decisions, including decisions about managing the future genetic diversity of the species, but also decisions about where and what type of river restoration actions will be effective for subpopulations of this highly migratory species. Adult pallid sturgeon may migrate hundreds of kilometers (km) to spawn and their progeny may disperse even greater distances downstream as drifting free embryos. As a result of their complex life history pallid sturgeon naturally exploit a wide range of habitats during their life cycles. The construction of dams and reservoirs has fragmented habitats and may have shifted Missouri River subpopulations downstream. Research has not identified one primary biological or ecological constraint that appears to limit populations of the pallid sturgeon. With the present (2013) state of knowledge many life stages and life-stage transitions cannot be ruled out as contributing to recruitment failure. Biological opinions in 2000 (and amended in 2003) presented the dominant hypotheses for recruitment failure that existed at that time. Emphasis was on the role of the flow regime, specifically spring flow pulses (“spring rises”), to condition spawning substrate and cue reproductive aggregations and migrations, and on low flows and additional slow, shallow-water area to serve as rearing habitat for age-0 to juvenile pallid sturgeon. Studies on spawning habitat dynamics have documented that habitat patches selected for spawning by fish in the Lower Missouri River (Missouri River downstream from Gavins Point Dam to the confluence with the Mississippi River) are dominantly on outside, revetted bends in the deepest, fastest, and most turbulent water. Studies in more natural habitat on the Yellowstone River have documented spawning in convergent flow in the middle of the channel on discrete patches of gravel within a sand-dominated channel, an arrangement that may be more effective in attracting aggregations of reproductive fish compared to the nearly continuous revetment on the Lower Missouri River. Pallid sturgeon spawn in the spring and early summer during periods of increasing day length. Water temperature consistently exerts a threshold effect for spawning at 16–18 °C. In addition, the role of water temperature is indicated by pauses and reversals in upstream migrations that have been associated with cold weather fronts that create a transient decrease in water temperature. From 2005 to 2012 on the Lower Missouri River, no obvious relations between flow pulses and fish movements and spawning behaviors have been apparent. However, pallid sturgeon tracking at the Upper Missouri–Yellowstone confluence indicates that in most years, most telemetered pallid sturgeon migrate out of the Missouri River and into the Yellowstone River in the June–July timeframe in association with the spring pulse. This pattern was disrupted in 2011 when a high flow pulse with warm temperatures and high turbidity emanated from the Milk River, followed by record releases from Fort Peck Dam, and 36–39 percent of the telemetered population migrated up the Upper Missouri. This result supports the hypothesis that sufficiently large flow pulses may trigger migration and aggregation but it is not clear that functional pulses are within reservoir management authorities. Notably, a pallid sturgeon free embryo was captured on the Upper Missouri River in 2011 and another single, genetically confirmed embryo was captured on the Yellowstone River in 2012. Research on free-embryo drift has indicated the potential for hundreds of miles of downstream dispersal. Lack of distance to accommodate the extended downstream dispersal period of free embryos on the Upper Missouri and Yellowstone Rivers is the predominant hypothesis for recruitment failure in the upper basin. Long drift distances in the Lower Missouri River may be responsible for shifting Lower Missouri River sub-populations further into the Middle Mississippi River. Physical understanding of drift processes indicates that mean velocities could be slowed through decreased discharges or increased channel hydraulic radius (width and topographic diversity) to reduce free-embryo dispersal distances. In addition, the probability that free embryos are transported into and retained in channel-margin habitats is theoretically amenable to channel re-engineering that would increase cross-channel secondary currents in bends or channel expansions. Considerable uncertainty persists, however, about whether extended drift of Lower Missouri River larvae is responsible for recruitment failure. If drift distance is limiting, it is important to discern whether it would be advisable to retain larvae within the Missouri River, and where along the river restoration projects should be placed to optimize survival and growth of age-0 and juvenile sturgeon. Longitudinal differences in female pallid sturgeon fecundity lend support to the hypothesis that recruitment failure may be due, in part, to fish having insufficient nutrition to produce the numbers of gametes needed for the population to grow, perhaps because of simultaneous declines in prey-fish populations and their habitats. Establishing a chain of causality from habitat decline, to prey-fish populations, to sturgeon diets, to sturgeon fecundity, and to pallid sturgeon population growth presents a considerable scientific challenge. In addition to the dominant hypotheses relating pallid sturgeon populations to changes in flow regime and channel morphology, other factors have been identified that might be sources of stress and contribute to recruitment failure. Among these are water quality and contaminants. Ambient water-quality monitoring on the Missouri River has demonstrated summer episodes when dissolved oxygen dips below 5 milligrams per liter, a threshold that may be stressful especially to age-0 and juvenile sturgeon. Documented cases of intersex in shovelnose and pallid sturgeon indicate that agricultural and municipal sources of endocrine disrupting chemicals also may have a role in pallid sturgeon recruitment failure. Scientific understanding of the ecological requirements of pallid sturgeon has increased almost exponentially in the last two decades, and efforts are now turning from understanding fundamental biology of the species to quantifying how population dynamics relate to potential management actions. Progress in developing the science needed to inform management actions on the Missouri River may benefit from continuation of monitoring of reproductive cycles, reproductive movements, growth, and survival of telemetry tagged adults, increased emphasis on focused, complementary field and laboratory studies of factors influencing early life history, implementation of studies to resolve the role of food limitations in growth, survival, and reproductive condition, and implementation of studies designed specifically to parameterize models linking management to populations.

Missouri River↗

USGS2009

A landscape indicator approach to the identification and articulation of the consequences of land-cover change in the Mid-Atlantic Region, 1973-2001

Landscape indicators, derived from land-use and land-cover data, hydrology, nitrate deposition, and elevation data, were used by Jones and others (2001a) to calculate the ecological consequences of land-cover change. Nitrate loading and physical bird habitat were modeled from 1973 and 1992 land-cover and other spatial data for the Mid-Atlantic region. Utilizing the same methods, this study extends the analysis another decade with the use of the 2001 National Land Cover Dataset. Land-cover statistics and trends are calculated for three time periods: 1973-1992, 1992-2001 and 1973-2001. In addition, high-resolution aerial photographs (1 meter or better ground-sample distance) were acquired and analyzed for thirteen pairs of adjacent USGS 7.5 minute quadrangle maps in areas where distinct positive or negative changes to nitrogen loading and bird habitat were previously calculated. During the entire 30 year period, the data show that there was extensive loss of agriculture and forest area and a major increase in urban land-cover classes. However, the majority of the conversion of other classes to urban occurred during the 1992-2001 period. During the 1973-1992 period, there was only moderate increase in urban area, while there was an inverse relationship between agricultural change and forest change. In general, forest gain and agricultural loss was found in areas of improving landscape indicators, and forest loss and agricultural gain was found to occur in areas of declining indicators related to habitat and nitrogen loadings, which was generally confirmed by the aerial photographic analysis. In terms of the specific model results, bird habitat, which is mainly related to the extent of forest cover, declined overall with forest extent, but was also affected more in the decline of habitat quality. Nitrate loading, which is mainly related to agricultural land cover actually improved from 1992-2001, and in the overall study, mainly due to the conversion of agriculture to forests and urban. The high-resolution imagery analysis was significant in that it confirmed, at a very local level, the specific land-cover changes that were driving the landscape metrics and model results that were calculated from moderate resolution land-cover data and models. These were generally subtle changes in patch size of agriculture, forest, and urban areas, but had substantial effects on bird habitat and nitrogen loadings. This analysis of high-resolution imagery demonstrates and confirms the important ability of moderate-resolution land-cover data to capture significant landscape-level activity that is directly related to specific metrics of ecological significance. It also demonstrates consistent landscape-scale relationships between data derived from high-resolution, moderate-resolution and landscape-model sources. Finally, many of the areas of improvement and decline in bird habitat and nitrogen loadings appear to be potentially regional in nature and likely reflect some local trend in landscape activity. Although the use of ecoregions as sampling units has been criticized in recent years, these results show that basic changes in Level 1 land-cover categories, such as forest and agriculture, may still reflect ecoregional patterns and considerations at some scale of mapping and analysis. This is a potentially important area for future landscape-indicator research. This and other follow-on research opportunities are discussed.

Open-File Report↗

USGS2024

Vegetation community recovery on restored bottomland hardwood forests in northeast Indiana, USA

Vegetation communities in restored bottomland hardwood forests in northeast Indiana were studied 6–21 years after restoration to assess progress toward restoration objectives. The study focused on four sites that were restored to compensate for resource injuries after contaminant releases. The restored sites were compared with four reference-site conditions, including crops (prerestoration condition), old field communities representing a no-management alternative, locally sampled second-growth mature forests, and forest community types described by the US National Vegetation Classification (USNVC), which represent ideal or defining conditions of recognized vegetation communities. Fixed-area plots provided data on field-sampled environmental variables, vegetation, soil, and hydrological conditions for crops, old fields, restored areas, and mature forests. The USNVC database provided quantitative data for three historically and geographically relevant reference forest community types for comparison with the sampled communities. Results of nonmetric multidimensional scaling based on species cover revealed clear gradients relating to site age and canopy development. Along those gradients, restored areas demonstrated increasing similarity to mature forest reference communities in terms of floristic composition. Specifically, the floristic quality of restored areas was significantly greater than that of crops and old fields. Furthermore, soil health measurements of physical, chemical, and hydrological conditions indicated significant improvements in restored site soils compared with prerestoration conditions represented by cropland soils. Descriptions and data from the USNVC provided ecological context for restoration target conditions and facilitated the assessment of restoration recovery along a trajectory from starting conditions to those target conditions. Descriptions by USNVC also helped identify deviations from the intended restoration objectives (e.g., invasive species recruitment) and potential adaptive management actions to return sites to their intended trajectories. Integr Environ Assess Manag 2024;00:1–22. Published 2024. This article is a U.S. Government work and is in the public domain in the USA. Integrated Environmental Assessment and Management published by Wiley Periodicals LLC on behalf of Society of Environmental Toxicology & Chemistry (SETAC).

Indiana↗

USGS2014

Scale-dependent feedbacks between patch size and plant reproduction in desert grassland

Theoretical models suggest that scale-dependent feedbacks between plant reproductive success and plant patch size govern transitions from highly to sparsely vegetated states in drylands, yet there is scant empirical evidence for these mechanisms. Scale-dependent feedback models suggest that an optimal patch size exists for growth and reproduction of plants and that a threshold patch organization exists below which positive feedbacks between vegetation and resources can break down, leading to critical transitions. We examined the relationship between patch size and plant reproduction using an experiment in a Chihuahuan Desert grassland. We tested the hypothesis that reproductive effort and success of a dominant grass ( Bouteloua eriopoda ) would vary predictably with patch size. We found that focal plants in medium-sized patches featured higher rates of grass reproductive success than when plants occupied either large patch interiors or small patches. These patterns support the existence of scale-dependent feedbacks in Chihuahuan Desert grasslands and indicate an optimal patch size for reproductive effort and success in B. eriopoda . We discuss the implications of these results for detecting ecological thresholds in desert grasslands.

New Mexico↗

USGS2019

Comparison of methods to examine diet of feral horses from non-invasively collected fecal samples

Feral horses (Equus ferus caballus) have become abundant on public lands in the American West, particularly over the past 10 yr. In areas where they are overabundant, there is risk of habitat degradation. Most previous studies on diet and habitat use of feral horses were conducted more than 20 yr ago; rangelands have changed considerably in that time, so it is useful to revisit horse diets. We conducted a study to examine the diet of feral horses using noninvasive methods and subjectively compare diet analysis techniques. We collected feral horse fecal samples from a sagebrush/pinyon-juniper ecosystem in Colorado in May, August, and October 2014. We analyzed 30 fecal samples from each collection session by both microhistology and plant DNA barcoding. Both microhistology and plant DNA barcoding results indicated horse diet consisted primarily of graminoids (78.5% and 68.8%, respectively, both of which are in greater proportion than availability based on ecological site descriptions); however, the two methods differed in species composition of grasses. Similar to other studies, microhistological analyses underestimated the proportion of forbs in the diet compared with plant DNA barcoding analyses, which showed a surprisingly high contribution of forbs to the diet compared with previous studies. Our results suggest plant DNA barcoding analyses have great potential, although both methods have inherent biases.

Colorado↗

USGS1997

The effect of temperature on growth of juvenile bloater

The bloater ( Coregonus hoyi ), which feeds mainly on invertebrates and in turn is eaten by lake trout ( Salvelinus namaycush ) and burbot ( Lota lota ), is a major trophic integrator in coldwater ecosystems in the upper Great Lakes. To better understand their thermal niche and habitat distribution, we acclimated groups of yearling bloater to 3, 5, 10, 15, 20, or 25°C and then fed them ad libitum for 35 days. Bloater increased in length and weight at all of the test temperatures and at the end of the study were heaviest and longest at 15–20°C. The specific growth rate was highest at 20°C and progressively lower at 15, 25, 10, 5, and 3°C. A curve fitted to the specific growth rate data indicated that the optimum temperature for growth was 18.6°C. Our results are in agreement with other published information on the thermal ecology of juvenile bloater.

Journal of Great Lakes Research↗

USGS2011

Implementing a U.S. national phenology network

The passing of seasons, as gauged by annual events or phenophases in organisms' life cycles, is arguably one of the most pervasive environmental variations on Earth. Shifts in seasonal timing, or phenology, are observed in flowering and other stages of plant development, animal migration and reproduction, hibernation, and the seasonal activity of cold-blooded animals [e.g., Schwartz , 2003; Root et al ., 2005]. As an important life history trait, phenology is an object of natural selection; depending on timescales, shifts in phenology can lead to evolutionary change. Thus, phenology is not only an indicator of pattern in environmental science, but also its variation has fitness consequences for individuals, and these can scale up to broader ecological dynamics.

Eos, Transactions, American Geophysical Union↗

USGS2014

The role of landscape features and density dependence in growth and fledging rates of Piping Plovers in North Dakota, USA

For species with precocial young, survival from hatching to fledging is a key factor influencing recruitment. Furthermore, growth rates of precocial chicks are an indicator of forage quality and habitat suitability of brood-rearing areas. We examined how growth and fledging rates of Piping Plover ( Charadrius melodus ) chicks were influenced by landscape features, such as hatchling density (hatchlings per hectare of remotely sensed habitat [H ha -1 ]), island vs. mainland, and wind fetch (exposure to waves) at 2-km segments (n ¼ 15) of Lake Sakakawea, North Dakota, during 2007–2008. Hatchling growth was comparable with published estimates for other habitats. Models for fledging rate (fledged young per segment) assuming density dependence had more support (wi ¼ 96%) than those assuming density independence (wi ¼ 4%). Density-dependent processes appeared to influence fledging rate only at densities .5 H ha -1 , which occurred in 19% of the segments we sampled. When areas with densities .5 H ha -1 were excluded, density-dependence and density-independence models were equally supported (wi ¼ 52% and 48%, respectively). Fledging rate declined as the wind fetch of a segment increased. Fledging rate on mainland shorelines was 4.3 times greater than that on islands. Previous work has indicated that plovers prefer islands for nesting, but our results suggest that this preference is not optimal and could lead to an ecological trap for chicks. While other researchers have found nesting-habitat requirements to be gravelly areas on exposed beaches without fine-grain substrates, our results suggest that chicks fledge at lower rates in these habitats. Thus, breeding plovers likely require complexes of these nesting habitats along with protected areas with fine, nutrient-rich substrate for foraging by hatchlings.

North Dakota↗

USGS2024

A multi-sensor approach to characterize winter water-level drawdown patterns in lakes

Artificial manipulation of lake water levels through practices like winter water-level drawdown (WD) is prevalent across many regions, but the spatiotemporal patterns are not well documented due to limited in situ monitoring. Multi-sensor satellite remote sensing provides an opportunity to map and analyze drawdown frequency and metrics (timing, magnitude, duration) at broad scales. This study developed a cloud computing framework to process time series of synthetic aperture radar (Sentinel 1-SAR) and optical sensor (Landsat 8, Sentinel 2) data to characterize WD in 166 lakes across Massachusetts, USA, during 2016–2021. Comparisons with in situ logger data showed that the Sentinel 1-derived surface water area captured relative water-level fluctuations indicative of WD. A machine learning approach classified lakes as WD versus non-WD based on seasonal water-level fluctuations derived from Sentinel 1-SAR data. The framework mapped WD lakes statewide, revealing prevalence throughout Massachusetts with interannual variability. Results showed WDs occurred in over 75% of lakes during the study period, with high interannual variability in the number of lakes conducting WD. Mean WD magnitude was highest in the wettest year (2018) but % lake area exposure did not show any association with precipitation and varied between 8% to 12% over the 5-year period. WD start date was later and duration was longer in wet years, indicating climate mediation of WD implementation driven by management decisions. The data and tools developed provide an objective information resource to evaluate ecological impacts and guide management of this prevalent but understudied phenomenon. Overall, the results and interactive web tool developed as part of this study provide new hydrologic intelligence to inform water management and policies related to WD practices.

Massachusetts↗

USGS1986

Nest sites of ducks in grazed mixed-grass prairie in North Dakota

Habitat use and nesting success of seven species of dabbling ducks were evaluated in five vegetative associations within grazed mixed-grass prairie in central North Dakota. During 1976-80, 548 nests were found on 412 ha of grazed prairie for an annual average density of 27 nests/100 ha. Numbers of nests found ranged from 1/100 ha in 1977 (a drought year) to 58/100 ha in 1979 (a very wet year), reflecting the variability that may be expected in a dynamic prairie wetland environment. Nesting success ranged from an average of 23% in the western snowberry (Symphoricarpos occidentalis) association to 34% in the mixed-grass association. Forty-two percent of the mallard (Anas platyrhynchos) nests and 35% of the gadwall (A. strepera) nests were in patches of western snowberry and/or Wood's rose (Rosa woodsii) that made up 2% of the available cover. Numbers of nests of blue-winged teal (A. discors) and northern shoveler (A. clypeata) were highest in cool-season grasses, especially green needlegrass (Stipa viridula) and western wheatgrass (Agropyron smithii). Height/density (HD) of residual cover decreased exponentially with increased grazing pressure. Use of grazed prairie by blue-winged teal was maximized when the HD of residual cover was 0.5 dm or higher, as could be maintained under light grazing. Results of this study indicated that properly grazed mixed-grass prairie can provide adequate nesting habitat for dabbling ducks. We recommend that preservation and sound ecological management be focused on large tracts of mixed-grass prairie with complexes of seasonal and semipermanent wetlands.

North Dakota↗

USGS2017

Using resilience and resistance concepts to manage persistent threats to sagebrush ecosystems and greater sage-grouse

Conservation of imperiled species often demands addressing a complex suite of threats that undermine species viability. Regulatory approaches, such as the US Endangered Species Act (1973), tend to focus on anthropogenic threats through adoption of policies and regulatory mechanisms. However, persistent ecosystem-based threats, such as invasive species and altered disturbance regimes, remain critical issues for most at-risk species considered to be conservation-reliant. We describe an approach for addressing persistent ecosystem threats to at-risk species based on ecological resilience and resistance concepts that is currently being used to conserve greater sage-grouse (Centrocercus urophasianus) and sagebrush ecosystems. The approach links biophysical indicators of ecosystem resilience and resistance with species-specific population and habitat requisites in a risk-based framework to identify priority areas for management and guide allocation of resources to manage persistent ecosystem-based threats. US federal land management and natural resource agencies have adopted this framework as a foundation for prioritizing sage-grouse conservation resources and determining effective restoration and management strategies. Because threats and strategies to address them cross-cut program areas, an integrated approach that includes wildland fire operations, postfire rehabilitation, fuels management, and habitat restoration is being used. We believe this approach is applicable to species conservation in other largely intact ecosystems with persistent, ecosystem-based threats.

Rangeland Ecology and Management↗

USGS2020

Species richness responses to water withdrawal scenarios and minimum flow levels: Evaluating presumptive standards in the Tennessee and Cumberland River basins

Water resource managers are challenged to balance growing water demand with protecting aquatic ecosystems and biodiversity. Management decisions can benefit from improved understanding of water withdrawal impacts on hydrologic regimes and ecological assemblages. This study used Ecological Limit Functions for fish groups within the Tennessee and Cumberland river basins to predict species richness responses under simulated constant-rate (CR) and percent-of-flow (POF) withdrawals and for different minimum flow level protections. Streamflow characteristics (SFC) and richness were generally less sensitive to POF withdrawals than CR withdrawals among sites, fish groups, and ecoregions. Species richness generally declined with increasing withdrawals, but responses were variable depending on site-specific departures of SFCs from reference conditions, drainage area, fish group, ecoregion, and minimum flow level. Under POF withdrawals, 10% and 20% daily flow reductions often resulted in loss of <1 species and/or ≤5% richness among fish groups. Median ecological withdrawal thresholds ranged from 3.5-31% for POF withdrawals and from 0.01-0.92 m3/s for CR withdrawals across fish groups and ecoregions. Application of minimum flow level cutoffs often resulted in damping effects on SFC and richness responses, indicating that protection of low streamflows may mitigate hydrologic alteration and fish species richness loss related to water withdrawals. Site-specific and regionally summarized responses of flow regimes and fish assemblages under alternative withdrawal strategies in this study may be useful in informing water management decisions regarding streamflow allocation and maintaining ecological flows.

Cumberland River basin↗

USGS2022

Freshwater corridors in the conterminous US: A coarse-filter approach based on lake-stream networks

Maintaining regional-scale freshwater connectivity is challenging owing to the dendritic, easily fragmented structure of freshwater networks, but is essential for promoting ecological resilience under climate change. Although the importance of stream network connectivity has been recognized, lake-stream network connectivity has largely been ignored. Furthermore, protected areas are generally not designed to maintain or encompass entire freshwater networks. We applied a coarse-filter approach to identify potential freshwater corridors for diverse taxa by calculating connectivity scores for 385 lake-stream networks across the conterminous US based on network size, structure, resistance to fragmentation, and dam prevalence. We also identified 2080 disproportionately important lakes for maintaining intact networks (i.e., “hubs”; 2% of all network lakes) and analyzed the protection status of hubs and potential freshwater corridors. Just 3% of networks received high connectivity scores based on their large size and structure (medians of 1303 lakes, 498.6 km north-south stream distance), but these also contained a median of 454 dams. In contrast, undammed networks (17% of networks) were considerably smaller (medians of 6 lakes, 7.2 km north-south stream distance), indicating that the functional connectivity of the largest potential freshwater corridors in the conterminous US currently may be diminished compared to smaller, undammed networks. Network lakes and hubs were protected at similar rates nationally across different levels of protection (8-18% and 6-20%, respectively), but were generally more protected in the western US. Our results indicate that conterminous US protection of major freshwater corridors and the hubs that maintain them generally fell short of the international conservation goal of protecting an ecologically representative, well-connected set of fresh waters (≥ 17%) by 2020 (Aichi Target 11). Conservation planning efforts might consider focusing on restoring natural hydrologic connectivity at or near hubs, particularly in larger networks, less protected, or biodiverse regions, to support freshwater biodiversity conservation under climate change.

Ecosphere↗

USGS2006

Forest reproduction along a climatic gradient in the Sierra Nevada, California

To elucidate broad-scale environmental controls of coniferous forest reproduction in the Sierra Nevada, California, we monitored reproduction for 5 years in 47 plots arrayed across a steep elevational (climatic) gradient. We found that both absolute seedling densities (stems < 1.37 m) and seedling densities relative to overstory parent tree basal area declined sharply with elevation. Rates of seedling turnover (the average of birth and death rates) also declined with elevation. In contrast, seed production was not predicted by elevation and was highly variable from year to year. During a mast year of seed production, the intensity of masting was uneven among plots. Seedling densities were elevated only during the single year immediately following the mast year, suggesting reproduction in our forests may be primarily limited by abiotic factors such as the availability of suitable sites and weather. Disturbance also clearly affected reproduction; plots that had recently burned had significantly higher seedling to parent tree ratios for Abies species, suggesting that even though established Abies concolor may be relatively susceptible to fire, the species can recover rapidly through prolific reproduction. Since reproductive failures may be our earliest signal of changing forest conditions, seedling dynamics could provide a sensitive, if variable, indicator of environmental changes.

California↗

USGS2014

Reduced population variance in strontium isotope values informs domesticated turkey use at Chaco Canyon, New Mexico, USA

Traditionally strontium isotopes (87Sr/86Sr) have been used as a sourcing tool in numerous archaeological artifact classes. The research presented here demonstrates that 87Sr/86Srbioapatite ratios also can be used at a population level to investigate the presence of domesticated animals and methods of management. The proposed methodology combines ecology, isotope geochemistry, and behavioral ecology to assess the presence and nature of turkey (Meleagris gallopavo) domestication. This case study utilizes 87Sr/86Srbioapatite ratios from teeth and bones of archaeological turkey, deer (Odocoileus sp.), lagomorph (Lepus sp. and Sylvilagus sp.), and prairie-dog (Cynomys sp.) from Chaco Canyon, New Mexico, U.S.A. (ca. A.D. 800 – 1250). Wild deer and turkey from the southwestern U.S.A. have much larger home ranges and dispersal behaviors (measured in kilometers) when compared to lagomorphs and prairie dogs (measured in meters). Hunted deer and wild turkey from archaeological contexts at Chaco Canyon are expected to have a higher variance in their 87Sr/86Srbioapatite ratios, when compared to small range taxa (lagomorphs and prairie dogs). Contrary to this expectation, 87Sr/86Srbioapatite values of turkey bones from Chacoan assemblages have a much lower variance than deer and are similar to that of smaller mammals. The sampled turkey values show variability most similar to lagomorphs and prairie dogs, suggesting the turkeys from Chaco Canyon were consuming a uniform diet and/or were constrained within a limited home range, indicating at least proto-domestication. The population approach has wide applicability for evaluating the presence and nature of domestication when combined with paleoecology and behavioral ecology in a variety of animals and environments.

New Mexico↗