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Tick-, mosquito-, and rodent-borne parasite sampling designs for the National Ecological Observatory Network

Parasites and pathogens are increasingly recognized as significant drivers of ecological and evolutionary change in natural ecosystems. Concurrently, transmission of infectious agents among human, livestock, and wildlife populations represents a growing threat to veterinary and human health. In light of these trends and the scarcity of long-term time series data on infection rates among vectors and reservoirs, the National Ecological Observatory Network (NEON) will collect measurements and samples of a suite of tick-, mosquito-, and rodent-borne parasites through a continental-scale surveillance program. Here, we describe the sampling designs for these efforts, highlighting sampling priorities, field and analytical methods, and the data as well as archived samples to be made available to the research community. Insights generated by this sampling will advance current understanding of and ability to predict changes in infection and disease dynamics in novel, interdisciplinary, and collaborative ways.

Ecosphere

Cumulative Index to Chemicals and to Common and Scientific Names of Species Listed in Contaminant Hazard Reviews 1 through 34

The Patuxent Wildlife Research Center Contaminant Hazard Reviews (CHR) series synthesizes ecotoxicological data of selected environmental contaminants, with emphasis on hazards to native species of flora and fauna. From 1985 through 1998 a total of 34 reviews were published in various Reports series of the U.S. Department of the Interior on agricultural pesticides (carbofuran, chlordane, chlorpyrifos, diazinon, diflubenzuron, fenvalerate, mirex, paraquat, toxaphene), herbicides (acrolein, atrazine), metals and metalloids (arsenic, boron, cadmium, chromium, copper, lead, mercury, molybdenum, nickel, selenium, silver, tin, zinc), predacides (sodium monofluoroacetate), organic industrial wastes (dioxins, pentachlorophenol), veterinary chemicals (famphur), polycyclic aromatic hydrocarbons, polychlorinated biphenyls, mining wastes (cyanide), and ionizing radiations. This report is a cumulative index to the common and scientific names of all biological species listed in the first 34 reports in the CHR series, with individual species cross-referenced by contaminant and corresponding page numbers. A similar index is shown for chemicals.

Contaminant Hazard Reviews

Famphur Hazards to Fish, Wildlife, and Invertebrates: A Synoptic Review

Famphur (phosphorothioic acid, O,(4((dimethylamino)sulfonyl),phenoyl)O,Odimethyl ester), also known as Warbex, is a systemic organophosphorus insecticide used almost exclusively as a veterinary chemical to control parasite in livestock. Only famphur and its oxygen analog, famoxon, were of toxicological significance; other famphur metabolites were 31 to 237 times less toxic, as Judged by acute oraltoxicity tests in the mouse (Mus sp.). Famphur is administered to livestock by intramuscular or subcutaneous injection, through the diet, as a dermal pour-on, or as an oral bolus. Current recommendations include the discontinuance of topical applications of famphur to cattle because of its association with primary and secondary poisoning of birds, and more research on famphur in the three areas of latent effects on treated livestock, fate and effects in aquatic ecosystems, and carcinogenicity evaluation.

Contaminant Hazard Reviews

Antibiotic resistance in free-ranging wildlife

In this chapter, we provide an overview of antimicrobial resistant (AMR) bacteria in wildlife through the presentation of general trends of occurrence among both captive and free-ranging wild animal populations, discussion of importance to human health and wildlife conservation, and identification of priority areas for future research and monitoring efforts. Once most commonly identified in humans and domestic animals, AMR bacteria have now been reported to be widespread among free-ranging and captive wildlife and the broader environment. Antimicrobial resistance has been identified in wildlife inhabiting nearly every country, region, and habitat type from which samples have been obtained, although occurrence may be more common in animals that occupy anthropogenically impacted environments. Though AMR bacteria identified in free-ranging wildlife have generally not been associated with direct health impacts to the host, specific bacteria and types of resistance found in wildlife may be clinically relevant to humans. Furthermore, AMR bacteria harbored by captive or free-ranging animals may complicate veterinary treatment of captive, rare, or vulnerable wildlife provided care. Future investigations may obtain important information on the acquisition and dissemination of AMR bacteria by wildlife through the comparison of resistance harbored by bacteria from wildlife and the environments they occupy. The identification of specific environmental pathways through which resistance may be acquired would help to guide the development of intervention strategies to interrupt further spread of antimicrobial resistance to, from, and among wildlife. Implications of such strategies may also extend more broadly to promote domestic animal, human, and environmental health.

Book chapter

Disseminated granulomas caused by an unidentified protozoan in sandhill cranes

Oral granulomas were observed in 31 (33%) of 95 captive sandhill cranes (Grus canadensis) at the Patuxent Wildlife Research Center. Necropsy of six of the afflicted cranes revealed granulomatous nodules throughout many of their organ systems. Intracellular protozoan organisms morphologically resembling schizogonic stages were observed within the granulomas by light and electron microscopy. Sexual and asexual stages of coccidia were seen in sections of the intestines of 4 of 5 cranes examined microscopically, and Eimerian oocysts were seen in fecal flotation specimens from 3 of 4 birds.

Journal of the American Veterinary Medical Associa

Disseminated visceral coccidiosis in whooping cranes

Three 13- to 18-day-old whooping cranes (Grus americana) and a 9-year-old whooping crane died in outdoor pens at the Patuxent Wildlife Research Center. The deaths were associated with an overwhelming systemic infection by an intracellular protozoan parasite, which resulted in enteritis, granulomatous bronchopneumonia, hepatitis, splenitis, and myocarditis. The clinical, histopathologic, and electron microscopic findings were similar to those in sandhill cranes (Grus canadensis) at the Patuxent Center found to be infected with Eimeria reichenowi and E gruis. Since these eimerian species also parasitize wild whooping cranes, this parasite might be an important pathogenic agent for this species.

Journal of the American Veterinary Medical Associa

Optimized methods for total nucleic acid extraction and quantification of the bat white-nose syndrome fungus, Pseudogymnoascus destructans , from swab and environmental samples

The continued spread of white-nose syndrome and its impacts on hibernating bat populations across North America has prompted nationwide surveillance efforts and the need for high-throughput, noninvasive diagnostic tools. Quantitative real-time polymerase chain reaction (qPCR) analysis has been increasingly used for detection of the causative fungus, Pseudogymnoascus destructans , in both bat- and environment-associated samples and provides a tool for quantification of fungal DNA useful for research and monitoring purposes. However, precise quantification of nucleic acid from P. destructans is dependent on effective and standardized methods for extracting nucleic acid from various relevant sample types. We describe optimized methodologies for extracting fungal nucleic acids from sediment, guano, and swab-based samples using commercial kits together with a combination of chemical, enzymatic, and mechanical modifications. Additionally, we define modifications to a previously published intergenic spacer–based qPCR test for P. destructans to refine quantification capabilities of this assay.

Journal of Veterinary Diagnostic Investigation

Disseminated visceral coccidiosis in sandhill cranes

Disseminated visceral coccidiosis (DVC) caused by Eimeria spp was first recognized as a disease entity in captive sandhill cranes (Grus canadensis) and whooping cranes (G americana) at the Patuxent Wildlife Research Center. Because cranes produced at the Center are reintroduced to the wild to augment wild populations, studies involving both experimentally induced and natural infections were initiated to determine the potential or actual occurrence of DVC in wild Gruidae. Nine sandhill cranes dosed orally with eimerian oocysts of wild origin developed lesions characteristic of DVC. Extraintestinal granulomas associated with developing schizonts were found in 6 birds. Similar lesions were observed in wild sandhill cranes throughout parts of midwestern United States, Alaska, and Saskatchewan. These studies revealed the wide geographic distribution and the high frequency of occurrence of DVC in wild cranes.

Journal of the American Veterinary Medical Associa

Eradication of peste des petits ruminants and the wildlife-livestock interface

Growing evidence suggests that multiple wildlife species can be infected with peste des petits ruminants virus (PPRV), with important consequences for the potential maintenance of PPRV in communities of susceptible hosts, and the threat that PPRV may pose to the conservation of wildlife populations and resilience of ecosystems. Significant knowledge gaps in the epidemiology of PPRV across the ruminant community (wildlife and domestic), and the understanding of infection in wildlife and other atypical host species groups (e.g., camelidae, suidae, and bovinae) hinder our ability to apply necessary integrated disease control and management interventions at the wildlife-livestock interface. Similarly, knowledge gaps limit the inclusion of wildlife in the FAO/OIE Global Strategy for the Control and Eradication of PPR, and the framework of activities in the PPR Global Eradication Programme that lays the foundation for eradicating PPR through national and regional efforts. This article reports on the first international meeting on, “Controlling PPR at the livestock-wildlife interface,” held in Rome, Italy, March 27–29, 2019. A large group representing national and international institutions discussed recent advances in our understanding of PPRV in wildlife, identified knowledge gaps and research priorities, and formulated recommendations. The need for a better understanding of PPRV epidemiology at the wildlife-livestock interface to support the integration of wildlife into PPR eradication efforts was highlighted by meeting participants along with the reminder that PPR eradication and wildlife conservation need not be viewed as competing priorities, but instead constitute two requisites of healthy socio-ecological systems.

Frontiers in Veterinary Science