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USGS2004

Water-resources-related information for the Milwaukee Metropolitan Sewerage District planning area, Wisconsin, 1970-2002

The Milwaukee Metropolitan Sewerage District (MMSD) Corridor Study is a three-phase project designed to improve the understanding of water resources in the stream corridors of the MMSD planning area by initially compiling existing data and using the compiled information to develop 3-year baseline and long-term monitoring plans. This report is one of the products of Phase I of the Corridor Study. A literature review of surface-water-quality, surface water- quantity, and ecology studies conducted from 1970 through 2001 was completed and is summarized in this report. An inventory of Geographic Information System spatial coverages available for the MMSD planning area has been assembled. A database of water, sediment, and tissue (fish, shellfish, and others) chemistry, macroinvertebrates, fish, algae, habitat, geomorphic, and other physical and ecological data was compiled from data sets from MMSD, U.S. Geological Survey, Wisconsin Department of Natural Resources, and the U.S. Environmental Protection Agency. More than 2.7 million results are available in the MMSD Corridor Study database and the compilation of multiple datasets allows for retrieving data from a central database rather than from each of the source datasets. Data for 1970 through 2002 were collected for the 420-square-mile planning area by various agencies using different field data-collection and laboratory analysis methods. Chemical constituents and ecological components that are important to an urban setting and well represented in the database were selected for further investigation. Each constituent or component is described in this report with some or all of the following: a text summary, map of sampling locations, and in some cases median concentrations, statistical distributions of concentrations by subwatershed, table of summary statistics by subwatershed, and graphs of temporal and (or) seasonal trends. Physical data presented in the report include streamflow, stream stage, and precipitation data. Chemical indicators of water quality presented in the report include field measurements and miscellaneous constituents (pH, alkalinity, specific conductance, hardness, dissolved oxygen, biochemical oxygen demand, and chloride), sediment (total suspended solids and suspended sediment), nutrients (total nitrogen, nitrate, Kjeldahl nitrogen, total phosphorus, and dissolved phosphorus), trace elements (cadmium, mercury, copper, lead, arsenic, chromium, nickel, and zinc), pesticides (historically used pesticides and pesticides still in use), and polychlorinated biphenyls. Ecological indicators of water quality discussed in the report include community surveys of macroinvertebrates and fish, chlorophyll a concentrations, habitat assessments and channel-measurement data, and fecal coliform and E. coli bacterial counts. In addition to the compilation of the database, a major purpose of this investigation was to identify additional sampling that should be conducted under the baseline monitoring phase, which will be the second phase of the Corridor Study. Additional sampling may include: • Some subwatersheds, such as those in the headwaters. • Emerging contaminants such as pharmaceuticals and personal care products (PPCPs), human hormones, organic wastewater contaminants, and other constituents that result from human activity. • E. coli, which can serve as an indicator of health risk to swimmers and other recreational water users. • Pesticides in all media. • PCBs. • Trace elements in water, bed sediment, and tissues (fish, shellfish, and others). • Samples during winter months or during early snowmelt episodes to address constituents such as chloride and some nutrients that have seasonal variability and that may be affected by factors such as road deicing during the winter. • Samples for macroinvertebrate and fish-community data and habitat assessments. • Physical data such as stream-channel cross-section profiles, bridge-scour assessments, flood-plain maps, structures, and shoreline conditions.

Wisconsin↗

USGS2010

Evaluating release alternatives for a long-lived bird species under uncertainty about long-term demographic rates

The release of animals to reestablish an extirpated population is a decision problem that is often attended by considerable uncertainty about the probability of success. Annual releases of captive-reared juvenile Whooping Cranes (Grus americana) were begun in 1993 in central Florida, USA, to establish a breeding, non-migratory population. Over a 12-year period, 286 birds were released, but by 2004, the introduced flock had produced only four wild-fledged birds. Consequently, releases were halted over managers' concerns about the performance of the released flock and uncertainty about the efficacy of further releases. We used data on marked, released birds to develop predictive models for addressing whether releases should be resumed, and if so, under what schedule. To examine the outcome of different release scenarios, we simulated the survival and productivity of individual female birds under a baseline model that recognized age and breeding-class structure and which incorporated empirically estimated stochastic elements. As data on wild-fledged birds from captive-reared parents were sparse, a key uncertainty that confronts release decision-making is whether captive-reared birds and their offspring share the same vital rates. Therefore, we used data on the only population of wild Whooping Cranes in existence to construct two alternatives to the baseline model. The probability of population persistence was highly sensitive to the choice of these three models. Under the baseline model, extirpation of the population was nearly certain under any scenario of resumed releases. In contrast, the model based on estimates from wild birds projected a high probability of persistence under any release scenario, including cessation of releases. Therefore, belief in either of these models suggests that further releases are an ineffective use of resources. In the third model, which simulated a population Allee effect, population persistence was sensitive to the release decision: high persistence probability was achieved only through the release of more birds, whereas extirpation was highly probable with cessation of releases. Despite substantial investment of time and effort in the release program, evidence collected to date does not favor one model over another; therefore, any decision about further releases must be made under considerable biological uncertainty. However, given an assignment of credibility weight to each model, a best, informed decision about releases can be made under uncertainty. Furthermore, if managers can periodically revisit the release decision and collect monitoring data to further inform the models, then managers have a basis for confronting uncertainty and adaptively managing releases through time.

Florida↗

USGS2010

The principal rare earth elements deposits of the United States: A summary of domestic deposits and a global perspective

The rare earth elements (REE) are fifteen elements with atomic numbers 57 through 71, from lanthanum to lutetium ('lanthanides'), plus yttrium (39), which is chemically similar to the lanthanide elements and thus typically included with the rare earth elements. Although industrial demand for these elements is relatively small in tonnage terms, they are essential for a diverse and expanding array of high-technology applications. REE-containing magnets, metal alloys for batteries and light-weight structures, and phosphors are essential for many current and emerging alternative energy technologies, such as electric vehicles, energy-efficient lighting, and wind power. REE are also critical for a number of key defense systems and other advanced materials. Section 843 of the National Defense Authorization Act for Fiscal Year 2010, Public Law 111-84, directs the Comptroller General to complete a report on REE materials in the defense supply chain. The Office of Industrial Policy, in collaboration with other U.S. Government agencies, has initiated (in addition to this report) a detailed study of REE. This latter study will assess the Department of Defense's use of REE, as well as the status and security of domestic and global supply chains. That study will also address vulnerabilities in the supply chain and recommend ways to mitigate any potential risks of supply disruption. To help conduct this study, the Office of Industrial Policy asked the U.S. Geological Survey (USGS) to report on domestic REE reserves and resources in a global context. To this end, the enclosed report is the initial USGS contribution to assessing and summarizing the domestic REE resources in a global perspective. In 2009, the Mineral Resources Program of the USGS organized a new project under the title Minerals at Risk and For Emerging Technologies in order to evaluate mineral resource and supply issues of rare metals that are of increasing importance to the national economy. Leaders and members of this project, with the assistance of the USGS National Minerals Information Center, prepared the enclosed USGS report on domestic REE resources. The USGS Mineral Resources Program has investigated domestic and selected foreign REE resources for many decades, and this report summarizes what has been learned from this research. The USGS National Minerals Information Center (formerly Minerals Information Team) has monitored global production, trade, and resources for an equally long period and is the principal source of statistics used in this report. The objective of this study is to provide a nontechnical overview of domestic reserves and resources of REE and possibilities for utilizing those resources. At the present time, the United States obtains its REE raw materials from foreign sources, almost exclusively from China. Import dependence upon a single country raises serious issues of supply security. In a global context, domestic REE resources are modest and of uncertain value; hence, available resources in traditional trading partners (such as Canada and Australia) are of great interest for diversifying sources of supply. This report restates basic geologic facts about REE relevant to assessing security of supply, followed by a review of current United States consumption and imports of REE, current knowledge of domestic resources, and possibilities for future domestic production. Further detail follows in a deposit-by-deposit review of the most significant domestic REE deposits (see index map). Necessary steps to develop domestic resources are discussed in a separate section, leading into a review of current domestic exploration and a discussion of the value of a future national mineral resource assessment of REE. The report also includes an overview of known global REE resources and discusses the reliability of alternative foreign sources of REE.

Scientific Investigations Report↗

USGS2007

Vertical gradients in water chemistry and age in the Northern High Plains Aquifer, Nebraska, 2003

The northern High Plains aquifer is the primary source of water used for domestic, industrial, and irrigation purposes in parts of Colorado, Kansas, Nebraska, South Dakota, and Wyoming. Despite the aquifer’s importance to the regional economy, fundamental ground-water characteristics, such as vertical gradients in water chemistry and age, remain poorly defined. As part of the U.S. Geological Survey’s National Water-Quality Assessment Program, water samples from nested, short-screen monitoring wells installed in the northern High Plains aquifer were analyzed for major ions, nutrients, trace elements, dissolved organic carbon, pesticides, stable and radioactive isotopes, dissolved gases, and other parameters to evaluate vertical gradients in water chemistry and age in the aquifer. Chemical data and tritium and radiocarbon ages show that water in the aquifer was chemically and temporally stratified in the study area, with a relatively thin zone of recently recharged water (less than 50 years) near the water table overlying a thicker zone of older water (1,800 to 15,600 radiocarbon years). In areas where irrigated agriculture was an important land use, the recently recharged ground water was characterized by elevated concentrations of major ions and nitrate and the detection of pesticide compounds. Below the zone of agricultural influence, major-ion concentrations exhibited small increases with depth and distance along flow paths because of rock/water interactions. The concentration increases were accounted for primarily by dissolved calcium, sodium, bicarbonate, sulfate, and silica. In general, the chemistry of ground water throughout the aquifer was of high quality. None of the approximately 90 chemical constituents analyzed in each sample exceeded primary drinking-water standards. Mass-balance models indicate that changes in groundwater chemistry along flow paths in the aquifer can be accounted for by small amounts of feldspar and calcite dissolution; goethite and clay-mineral precipitation; organic-carbon and pyrite oxidation; oxygen reduction and denitrification; and cation exchange. Mixing with surface water affected the chemistry of ground water in alluvial sediments of the Platte River Valley. Radiocarbon ages in the aquifer, adjusted for carbon mass transfers, ranged from 1,800 to 15,600 14C years before present. These results have important implications with respect to development of ground-water resources in the Sand Hills. Most of the water in the aquifer predates modern anthropogenic activity so excessive removal of water by pumping is not likely to be replenished by natural recharge in a meaningful timeframe. Vertical gradients in ground-water age were used to estimate long-term average recharge rates in the aquifer. In most areas, the recharge rates ranged from 0.02 to 0.05 foot per year. The recharge rate was 0.2 foot per year in one part of the aquifer characterized by large downward hydraulic gradients. Nitrite plus nitrate concentrations at the water table were 0.13 to 3.13 milligrams per liter as nitrogen, and concentrations substantially decreased with depth in the aquifer. Dissolved-gas and nitrogen-isotope data indicate that denitrification in the aquifer removed 0 to 97 percent (average = 50 percent) of the nitrate originally present in recharge. The average amount of nitrate removed by denitrification in the aquifer north of the Platte River (Sand Hills) was substantially greater than the amount removed south of the river (66 as opposed to 0 percent), and the extent of nitrate removal appears to be related to the presence of thick deposits of sediment on top of the Ogallala Group in the Sand Hills that contained electron donors, such as organic carbon and pyrite, to support denitrification. Apparent rates of dissolved-oxygen reduction and denitrification were estimated on the basis of decreases in dissolved-oxygen concentrations and increases in concentrations of excess nitrogen gas and ground-water ages along flow paths from the water table to deeper wells. Median rates of dissolved-oxygen reduction and denitrification south of the Platte River were at least 10 times smaller than the median rates north of the river in the Sand Hills. The relatively large denitrification rates in the Sand Hills indicate that the aquifer in that area may have a greater capacity to attenuate nitrate contamination than the aquifer south of the river, depending on rates of ground-water movement in the two areas. Small denitrification rates south of the river indicate that nitrate contamination in that part of the aquifer would likely persist for a longer period of time.

Nebraska↗

USGS2002

Possible sources of nitrate in ground water at swine licensed-managed feeding operations in Oklahoma, 2001

Samples collected and analyzed by the Oklahoma Department of Agriculture, Food, and Forestry from 1999 to 2001 determined that nitrate exceeded the U.S. Environmental Protection Agency maximum contaminant level for public drinking-water supplies of 10 milligrams per liter as nitrogen in 79 monitoring wells at 35 swine licensed-managed feeding operations (LMFO) in Oklahoma. The LMFOs are located in rural agricultural settings where long-term agriculture has potentially affected the ground-water quality in some areas. Land use prior to the construction of the LMFOs was assessed to evaluate the types of agricultural land use within a 500-meter radius of the sampled wells. Chemical and microbiological techniques were used to determine the possible sources of nitrate in water sampled from 10 wastewater lagoons and 79 wells. Samples were analyzed for dissolved major ions, dissolved trace elements, dissolved nutrients, nitrogen isotope ratios of nitrate and ammonia, wastewater organic compounds, and fecal coliform bacteria. Bacteria ribotyping analysis was done on selected samples to identify possible specific animal sources. A decision process was developed to identify the possible sources of nitrate. First, nitrogen isotope ratios were used to define sources as animal, mixed animal and fertilizer, or fertilizer. Second, wastewater organic compound detections, nitrogen-isotope ratios, fecal coliform bacteria detections, and ribotyping were used to refine the identification of possible sources as LFMO waste, fertilizer, or unidentified animal or mixtures of these sources. Additional evidence provided by ribotyping and wastewater organic compound data can, in some cases, specifically indicate the animal source. Detections of three or more wastewater organic compounds that are indicators of animal sources and detections of fecal coliform bacteria provided additional evidence of an animal source. LMFO waste was designated as a possible source of nitrate in water from 10 wells. The source of waste in water from five of those wells was determined through ribotyping, and the source of waste in water from the remaining five wells was determined by detections of three or more animal-waste compounds in the well samples. LMFO waste in the water from wells with unidentified animal source of nitrate does not indicate that LMFO waste was not the source, but indicated that multiple animal sources, including LMFO waste, may be the source of the nitrate.

Water-Resources Investigations Report↗

USGS1976

Water-quality effects on Baker Lake of recent volcanic activity at Mount Baker, Washington

Increased volcanic activity on Mount Baker, which began in March 1975, represents the greatest known activity of a Cascade Range volcano since eruptions at Lassen Peak, Calif. during 1914-17. Emissions of dust and increased emanations of steam, other gases, and heat from the Sherman Crater area of the mountain focused attention on the possibility of hazardous events, including lava flows, pyroclastic eruptions, avalanches, and mudflows. However, the greatest undesirable natural results that have been observed after one year of the increased activity are an increase in local atmospheric pollution and a decrease in the quality of some local water resources, including Baker Lake. Baker Lake, a hydropower reservoir behind Upper Baker Dam, supports a valuable fishery resource and also is used for recreation. The lake's feedwater is from Baker River and many smaller streams, some of which, like Boulder Creek, drain parts of Mount Baker. Boulder Creek receives water from Sherman Crater, and its channel is a likely route for avalanches or mudflows that might originate in the crater area. Boulder Creek drains only about 5 percent of the total drainage area of Baker Lake, but during 1975 carried sizeable but variable loads of acid and dissolved minerals into the lake. Sulfurous gases and the fumarole dust from Sherman Crater are the main sources for these materials, which are brought into upper Boulder Creek by meltwater from the crater. In September 1973, before the increased volcanic activity, Boulder Creek near the lake had a pH of 6.0-6.6; after the increase the pH ranged as low as about 3.5. Most nearby streams had pH values near 7. On April 29, in Boulder Creek the dissolved sulfate concentration was 6 to 29 times greater than in nearby creeks or in Baker River; total iron was 18-53 times greater than in nearby creeks; and other major dissolved constituents generally 2 to 7 times greater than in the other streams. The short-term effects on Baker Lake of the acidic, mineral-rich inflow depend mainly on: (1) the rate of flow and the character of Boulder Creek water at the time; (2) the relative rate of inflow of the feedwater from other streams; and (3) whether the reservoir is temperature-stratified (summer) or homothermal (winter). A distinct layer of Boulder Creek water was found in the lake in September 1975 extending at least 0.3 miles (.5 km) downreservoir. The greatest opportunity for water from Boulder Creek to persist as a layer and extend farthest before mixing with the other reservoir water is when Baker Lake is strongly stratified and Boulder Creek flow rate is large in relation to other feedwater. Baker Lake probably could assimilate indefinitely the acid loads measured during 1975, by dilution, chemical neutralization, and buffering of the acid-rich Boulder creek water. Minor elements found in Boulder Creek water included arsenic, selenium, and mercury; however, none of these would reach the limits recommended by the U.S. Environmental Protection Agency for public water supplies unless their concentrations increased to several times the amounts found during this study. Under the prevailing conditions, acid-rich Boulder Creek water apparently cannot accumulate as a pool, or persist as a layer long enough to reach Upper Baker Dam and attack the concrete. However, even if the acid load from Boulder Creek does not greatly increase, occasional light fish mortalities may result near the mouth of the creek. Greater acid and mineral loads, resulting from further increases in volcanic activity or other possible causes, could be more harmful, especially to the fish. Continued monitoring of Boulder Creek flow and water quality is needed to rapidly any changes in conditions at Sherman Crater, and to provide warning of possible greater impacts on Baker Lake from any future increases in Mount Baker activity.

Open-File Report↗

USGS2005

Evaluation of geohydrologic framework, recharge estimates and ground-water flow of the Joshua Tree area, San Bernardino County, California

Ground water historically has been the sole source of water supply for the community of Joshua Tree in the Joshua Tree ground-water subbasin of the Morongo ground-water basin in the southern Mojave Desert. The Joshua Basin Water District (JBWD) supplies water to the community from the underlying Joshua Tree ground-water subbasin. The JBWD is concerned with the long-term sustainability of the underlying aquifer. To help meet future demands, the JBWD plans to construct production wells in the adjacent Copper Mountain ground-water subbasin. As growth continues in the desert, there may be a need to import water to supplement the available ground-water resources. In order to manage the ground-water resources and to identify future mitigating measures, a thorough understanding of the ground-water system is needed. The purpose of this study was threefold: (1) improve the understanding of the geohydrologic framework of the Joshua Tree and Copper Mountain ground-water subbasins, (2) determine the distribution and quantity of recharge using field and numerical techniques, and (3) develop a ground-water flow model that can be used to help manage the water resources of the region. The geohydrologic framework was refined by collecting and interpreting water-level and water-quality data, geologic and electric logs, and gravity data. The water-bearing deposits in the Joshua Tree and Copper Mountain ground-water subbasins are Quarternary alluvial deposits and Tertiary sedimentary and volcanic deposits. The Quarternary alluvial deposits were divided into two aquifers (referred to as the 'upper' and the 'middle' alluvial aquifers), which are about 600 feet (ft) thick, and the Tertiary sedimentary and volcanic deposits were assigned to a single aquifer (referred to as the 'lower' aquifer), which is as thick as 1,500 ft. The ground-water quality of the Joshua Tree and Copper Mountain ground-water subbasins was defined by collecting 53 ground-water samples from 15 wells (10 in the Joshua Tree ground-water subbasin and 5 in the Copper Mountain ground-water subbasin) between 1980 and 2002 and analyzing the samples for major ions, nutrients, and selected trace elements. Selected samples also were analyzed for oxygen-18, deuterium, tritium, and carbon-14. The water-quality data indicated that dissolved solids and nitrate concentrations were below regulatory limits for potable water; however, fluoride concentrations in the lower aquifer exceeded regulatory limits. Arsenic concentrations and chromium concentrations were generally below regulatory limits; however, arsenic concentrations measured in water from wells perforated in the lower aquifer exceeded regulatory limits. The carbon-14 activities ranged from 2 to 72 percent modern carbon and are consistent with uncorrected ground-water ages (time since recharge) of about 32,300 to 2,700 years before present. The oxygen-18 and deuterium composition of water sampled from the upper aquifer is similar to the volume-weighted composition of present-day winter precipitation indicating that winter precipitation was the predominant source of ground-water recharge. Field studies, conducted during water years 2001 through 2003 to determine the distribution and quantity of recharge, included installation of instrumented boreholes in selected washes and at a nearby control site. Core material and cuttings from the boreholes were analyzed for physical, chemical, and hydraulic properties. Instruments installed in the boreholes were monitored to measure changes in matric potential and temperature. Borehole data were supplemented with temperature data collected from access tubes installed at additional sites along study washes. Streambed hydraulic properties and the response of instruments to infiltration were measured using infiltrometers. Physical and geochemical data collected away from the stream channels show that direct infiltration of precipitation to depths below the root zone and subsequent gro

Scientific Investigations Report↗

USGS2009

Ground-Water Quality Data in the Upper Santa Ana Watershed Study Unit, November 2006-March 2007: Results from the California GAMA Program

Ground-water quality in the approximately 1,000-square-mile Upper Santa Ana Watershed study unit (USAW) was investigated from November 2006 through March 2007 as part of the Priority Basin Project of the Groundwater Ambient Monitoring and Assessment (GAMA) Program. The GAMA Priority Basin project was developed in response to the Groundwater Quality Monitoring Act of 2001, and is being conducted by the U.S. Geological Survey (USGS) in cooperation with the California State Water Resources Control Board (SWRCB). The Upper Santa Ana Watershed study was designed to provide a spatially unbiased assessment of raw ground-water quality within USAW, as well as a statistically consistent basis for comparing water quality throughout California. Samples were collected from 99 wells in Riverside and San Bernardino Counties. Ninety of the wells were selected using a spatially distributed, randomized grid-based method to provide statistical representation of the study unit (grid wells). Nine wells were selected to provide additional understanding of specific water-quality issues identified within the basin (understanding wells). The ground-water samples were analyzed for a large number of organic constituents (volatile organic compounds [VOCs], pesticides and pesticide degradates, pharmaceutical compounds, and potential wastewater-indicator compounds), constituents of special interest (perchlorate, N-nitrosodimethylamine [NDMA], 1,4-dioxane, and 1,2,3-trichloropropane [1,2,3-TCP]), naturally occurring inorganic constituents (nutrients, major and minor ions, and trace elements), radioactive constituents, and microbial indicators. Naturally occurring isotopes (tritium, carbon-14, and stable isotopes of hydrogen and oxygen in water) and dissolved noble gases also were measured to help identify sources and ages of the sampled ground water. Dissolved gases, and isotopes of nitrogen gas and of dissolved nitrate also were measured in order to investigate the sources and occurrence of nitrate in the study unit. In total, nearly 400 constituents and water-quality indicators were investigated for this study. This study did not attempt to evaluate the quality of water delivered to consumers; after withdrawal from the ground, water typically is treated, disinfected, and (or) blended with other waters to maintain acceptable water quality. Regulatory thresholds apply to treated water that is served to the consumer, not to raw ground water. However, to provide some context for the results, concentrations of constituents measured in the raw ground water were compared with regulatory and non-regulatory health-based thresholds established by the U.S. Environmental Protection Agency (USEPA) and the California Department of Public Health (CDPH) and thresholds established for aesthetic concerns (secondary maximum contaminant levels, SMCL-CA) by CDPH. Volatile organic compounds (VOCs) were detected in more than 80 percent of USAW grid wells. Most VOCs detected were at concentrations far less than thresholds established for drinking water to protect human health; however, six wells had VOC concentrations above health-based thresholds. Twenty-four of the 85 VOCs investigated were detected in the study unit;11 were detected in more than 10 percent of the wells. The VOCs detected above health-based thresholds in at least one well were dibromochloropropane (DBCP), tetrachloroethene (PCE), trichloroethene (TCE), carbon tetrachloride, and 1,1-dichoroethene. Pesticide compounds were detected in more than 75 percent of the grid wells. However, of the 134 different pesticide compounds investigated, 13 were detected at concentrations greater than their respective long-term method detection limits, and only 7 compounds (all herbicides or herbicide degradates) were detected in more than 10 percent of the wells. No pesticide compound was detected above its health-based threshold, although thresholds exist for fewer than half of the pesticide compounds investigat

Data Series↗

USGS1993

Flow recommendations for maintaining riparian vegetation along the Upper Missouri River, Montana

Montana Power Company, Inc. (MPC) submitted a final license application to the Federal Energy Regulatory Commission (FERC) on November 30, 1992. In this application, MPC proposed a plan for the protection of fish, wildlife, habitat, and water-quality resources. One concern was maintenance of woody riparian vegetation along the Missouri River, especially along the Wild and Scenic reach of the river, where the riparian forest occurs in relatively small discontinuous stands. The objectives of this project were 1) to recommend flows that would protect and enhance riparian forests along the Missouri River, and 2) to develop elements of an environmental monitoring program that could be used to assess the effectiveness of the recommended flows. Plains cottonwood ( Populus deltoides subsp. monilifera ) is the key structural component of riparian forests along the Missouri River. Therefore, we focused our analysis on factors affecting populations of this species. Previous work had demonstrated that the age structure of cottonwood populations is strongly influenced by aspects of flow that promote successfully establishment. In this study our approach was to determine the precise age of plains cottonwood trees growing along the Upper Missouri River and to relate years of establishment to the flow record. Our work was carried out between Coal Banks Landing and the Fred G. Robinson Bridge within the Wild and Scenic portion of the Missouri River. This segment of the river occupies a narrow valley and exhibits little channel migration. Maps and notes from the journals of Lewis and Clark (1804-1806) suggest that the present distribution and abundance of cottonwoods within the study reach is generally similar to presettlement conditions. Flows in the study reach are influenced by a number of dams and diversions, most importantly, Canyon Ferry and Tiber Dams. Although flow regulation has decreased peak flows and increased low flows, the gross seasonal pattern of flow has not been greatly altered. Most cottonwood establishment in our study reach occurred in years with a peak mean daily flow greater than 1,400 m 3 /s (49,434 cfs), or in the two years following such a flow. These years include 35 out of the 111 years of record, and account for establishment of 47 of 60 trees examined, a highly significant relationship. Infrequent establishment of cottonwood trees is not the result of scarcity of seed or seedlings. In the study reach seedlings become established most years on bare, relatively low surfaces deposited by the river. However, the high elevation of establishment of all trees dating to before 1978 indicates that only individuals established on high flood deposits are able to survive subsequent floods and ice jams. In order to maintain the present abundance of plains cottonwood in the study area we recommend flood flows in excess of 1,400 m 3 /s (49,434 cfs) measures as mean daily discharge at Fort Benton (U.S. Geological Survey gage 06090800) with a recurrence interval of approximately 9 years. Because cottonwood seeds remain viable for only a few weeks, and because seedling require a moist, bare surface, we further recommend maintenance of the historic timing of flooding with peak flood flows occurring between mid-May and late-June. Flow is not the only factor influencing cottonwood regeneration along this reach of the Missouri River. Land management, especially cattle grazing, is clearly having an impact, and changes in cottonwood populations could be expected if these practices were altered. However, the dependence of cottonwood establishment on high flow is clear in this reach in spite of the effects of other factors. Given the value of the resource, we strongly suggest establishment of a monitoring program to determine the effectiveness of the recommended flows and to provide the data necessary for refining them. We recommend a monitoring program that would include: 1) ten permanent, widely space channel cross sections for annual measurement of channel geometry and cottonwood establishment, growth, and survival; 2) five livestock enclosures to monitor the influence of grazing in the study area; and 3) low-elevation aerial photography of the reach every five years and after every flood to detect changes in channel geometry and forested area. Because cottonwood establishment is episodic, a long-term commitment to the monitoring effort is essential. In addition, cross sections and exclosures should be easy enough to access that measurements during flood years are possible.

Montana↗

USGS2007

Field-based evaluations of sampling techniques to support long-term monitoring of riparian ecosystems along wadeable streams on the Colorado Plateau

To better plan for and implement long-term ecological monitoring, we measured riparian vegetation and fluvial geomorphic features at pilot study sites on four wadeable perennial stream reaches, representative of drainages across the Colorado Plateau. Our primary objectives were to (1) collect field data, (2) evaluate the efficiency and effectiveness of various ecological measures and measurement techniques for riparian ecosystems, and (3) use field-based sampling to inform and refine the development of standard operating procedures for use in implementing integrated, long-term monitoring of riparian ecosystems. Ultimately, this work was aimed at providing NPS staff with some of the information and methods needed to design and implement long-term monitoring of NPS riparian resources, which is both relevant to management, and fully operational within institutional resource constraints. Our results suggest that selecting sampling reaches and establishing a sampling frame of 11 transects, across a range of stream types, is feasible given a limited set of decision rules. A distinctive feature of richness across all sites was the high percentage of rare species, defined here as species having a single occurrence at a site. Rare species represented from 33 percent to 47 percent of the species total across the four pilot sites. Our data show that the two smallest quadrat sizes, 0.01 m 2 and 0.1 m 2 , rarely had any species that occurred in the desired frequency range and can be omitted from the monitoring protocol. Few species fell within the 30–70 percent range in the 1-m 2 quadrats, but this quadrat size appears to be useful at the Tsaile Creek (CACH) site. We recommend continuing to collect information at the 1-m 2 scale and reevaluating its usefulness after more data are available from different types of sites. The 10-m 2 quadrat is adequate for monitoring changes in frequencies of very common species at all sites. Based on pilot study results, we conclude that at sites with low total species numbers (< 60 species), 40–60, 10-m 2 quadrats, would be sufficient to characterize overall species diversity for relatively common species. At sites with higher total numbers of species (> 100), 60–80, 10-m 2 quadrats would be required to characterize overall species diversity. Rare species of interest should be monitored using alternative approaches, such as a site inventory and/or mapping (see Elzinga and others, 1998). A large number of the systematically placed 10-m 2 quadrats span two or more geomorphic surfaces, especially adjacent to the channel. This makes resolution of species affinities with distinct geomorphic landforms difficult. Thus, we provide an amendment to improve characterization of herbaceous and shrub species on narrow, near-channel surfaces by sampling additional 0.5-m by 1-m quadrats on those surfaces. It appears that for sites in narrow valley settings where riparian zones average less than approximately 40 m, the number of 10-m 2 quadrats systematically placed on 11 transects will not provide shrub cover estimates at 20 percent precision. In such cases, additional sample reaches should be added in order to attain a minimum of 130 to 140 10-m 2 shrub quadrats. The line-intercept technique can provide a relatively rapid, reach-scale quantification of proportional cover for woody vegetation and geomorphic surface types and that variance in these measures stabilizes by the eighth or ninth transect sampled. An overlay of the distribution of geomorphic surface data derived from line-intercept sampling on topographic survey information indicates that delineation of geomorphic surfaces could be done in conjunction with the topographic survey of each transect, obviating the need to record surface breaks using the line intercept. To include geomorphic surface identifications with the topographic survey, surface breaks and transitional surfaces should be included and identified in the survey, in addition to systematically placed survey points. Compared to 5-m by 20-m tree quadrats, belt transects were shown to provide similar estimates of stand structure (stem density and stand basal area) in less than 30 percent of the time. Further, for the streams sampled, there were no statistically significant differences in stem density and basal area estimates between 10-m and 20-m belt transects and the smaller belts took approximately half the time to sample. There was, however, high variance associated with estimates of stand structure for infrequently occurring stems, such as large, relict or legacy riparian trees. Legacy riparian trees occurred in limited numbers at all sites sampled. A reachscale population census of these trees indicated that the 10-m belt transects tended to underestimate both stem density and basal area for these riparian forest elements and that a complete reach-scale census of legacy trees averaged less than one hour per site.

Colorado Plateau↗

USGS2013

Identification of metrics to monitor salt marsh integrity on National Wildlife Refuges in relation to conservation and management objectives

Executive Summary Most salt marshes in the US have been degraded by human activities, and threats from physical alterations, surrounding land-use, species invasions, and global climate change persist. Salt marshes are unique and highly productive ecosystems with high intrinsic value to wildlife, and many National Wildlife Refuges (NWRs) have been established in coastal areas to protect large tracts of salt marsh and wetland-dependent species. Various management practices are employed routinely on coastal NWRs to restore and enhance marsh integrity and ensure ecosystem sustainability. Prioritizing NWR salt marshes for application of management actions and choosing among multiple management options requires scientifically-based methods for assessing marsh condition. Monitoring is integral to structured decision-making (SDM), a formal process for decomposing a decision into its essential elements. Within a natural resource context, SDM involves identifying management objectives, alternative management actions, and expected management outcomes. The core of SDM is a set of criteria for measuring system performance and evaluating management responses. Therefore, use of SDM to frame natural resource decisions leads to logical selection of monitoring attributes that are linked explicitly to management needs. We used SDM to guide selection of variables for monitoring the ecological integrity of salt marshes within the National Wildlife Refuge System (NWRS). Our objectives were to identify indicators of salt marsh integrity that are effective across large geographic regions, responsive to a wide range of threats, and feasible to implement within funding and staffing constraints of the NWRS. In April, 2008, we engaged interdisciplinary experts in a week-long rapid prototyping SDM workshop to define the essential elements of salt marsh management decisions on refuges throughout the northeastern, southwestern, and northwestern US, corresponding to respective Regions 5, 2, and 1 of the US Fish and Wildlife Service (FWS). Through this process we identified measurable attributes for monitoring salt marsh ecosystems that are integrated into conservation practice and target management objectives. The following salt marsh attributes were identified through the SDM process either for describing state condition to determine management needs or for evaluating the achievement of management objectives: historical condition and geomorphic setting; ditch density; surrounding land use; ratio of open water area to vegetation area; rate of pesticide application; environmental contaminant concentration; change in marsh surface elevation relative to sea level rise; tidal range and groundwater level; surface topography; salinity; and species composition and abundance of vegetation, invasive species, invertebrates, nekton, and breeding and wintering birds. The identified attributes were too broadly defined to serve as operational monitoring variables. Therefore, we tested specific metrics for quantifying most of these attributes in summers of 2008 and 2009. The first four attributes in the above list can be characterized by office-based analysis of existing GIS data layers. The remaining attributes require field-based methods for assessment. We were forced to exclude a small number of attributes from field tests due to inconsistent data (pesticide application rate, environmental contaminant concentrations) or requirements that exceeded the scope of this project (change in marsh surface elevation; surface topography; benthic invertebrates; wintering birds). We evaluated potential metrics for evaluating all remaining field attributes. In partnership with NWRS biologists, we tested rapid versus intensive metrics for monitoring field attributes (tidal range and groundwater level; marsh surface elevation; salinity; and species composition and abundance of vegetation, invasive species, nekton, and breeding birds) at coastal refuges throughout FWS Region 5. Seven refuges participated in metric testing in 2008: Rachel Carson (ME), Parker River (MA), Wertheim (NY), E. B. Forsythe (NJ), Bombay Hook (DE), Prime Hook (DE), and Eastern Shore of Virginia Complex (VA). These seven and two additional refuges participated in metric testing in 2009: Rhode Island Complex (RI) and Stewart B. McKinney (CT). We based all field metrics on existing protocols for salt marsh assessment. Sampling locations were determined randomly within delineated marsh study units (MSUs) at each refuge. Detailed field methods are provided in appendices to this report. Measurements for individual metrics were averaged across samples within MSUs during each year of sampling. Each year, correlation or regression analysis was conducted on average measurements across MSUs within each attribute set to identify redundant metrics. Statistical redundancy between a pair of metrics within an attribute set (i.e., correlation or regression slopes with p-values < 0.05) was considered justification for eliminating one of the pair from the regional set of monitoring metrics. Decisions regarding metric elimination versus retention were based on feasibility of monitoring, considering such factors as sampling time, resources required, and potential for regional standardization in implementation. The result of these tests is a reduced suite of monitoring metrics that targets NWRS management decisions and is practicable for implementing on a regional scale. Based on these tests, we recommend the following list of metrics for monitoring integrity of NWRS salt marshes (marsh attribute category is in parentheses): (historical condition and geomorphic setting) position of marsh in the landscape, marsh shape, degree of fill and/or fragmentation, degree of tidal flushing, amount of aquatic edge; (ditch density) ranking of ditch density from none to severe; (surrounding land use) relative proportion of agricultural land in a 150-m buffer around the marsh, relative proportion of natural land in a 150-m buffer around the marsh, relative proportion of natural land in a 1-km buffer around the marsh; (ratio of open water area to vegetation area) ratio of open water to emergent herbaceous wetlands within the marsh; (marsh surface elevation) elevation referenced to NAVD88 in a representative area of the marsh; (tidal range and groundwater level) percent of time the marsh surface is flooded during deployment of a continuous water-level monitor at a representative marsh location, mean depth of surface flooding as measured by a continuous water-level monitor at a representative location; (salinity) salinity measured in surface water; (vegetation community) vegetation species richness using the point-intercept method in 100-m diameter survey plots, percent cover of various marsh community types within 100-m diameter survey plots; (invasive species abundance) percent cover of invasive plant species measured using the point-intercept method in 100-m diameter survey plots; (nekton community) nekton density, nekton species richness, length of Fundulus heteroclitus ; (breeding bird community) abundance of Willets counted per point during standard call-broadcast surveys, summed abundance of tidal marsh obligate species (Clapper Rail, Willet, Saltmarsh Sparrow, Seaside Sparrow) counted per point during standard call-broadcast surveys. Metrics describing the historical condition, geomorphic setting, and broad landscape features can be assessed using existing GIS databases. Our results support use of rapid methods to assess the majority of field metrics; only those used to describe the nekton community must be measured using intensive methods (throw traps or ditch nets, dependant on habitat configuration). Implementation of these metrics for quantitative assessment of NWRS salt marsh integrity in FWS Region 5 requires developing sampling designs for each refuge. Additionally, it is important to determine how the monitoring information will be used within a management context. SDM should be used to complete the analysis of salt marsh management decisions. The next steps would involve 1) prioritizing and weighting the management objectives; 2) predicting responses to individual management actions in terms of objectives and metrics; 3) using multiattribute utility theory to convert all measurable attributes to a common utility scale; 4) determining the total management benefit of each action by summing utilities across objectives; and 5) maximizing the total management benefits within cost constraints for each refuge. This process would allow the optimum management decisions for NWRS salt marshes to be selected and implemented based directly on monitoring data and current understanding of marsh responses to management actions. Monitoring the outcome of management actions would then allow new monitoring data to be incorporated into subsequent decisions.

Connecticut, Delaware, Maine, Massachusetts, New J↗

USGS2013

Geology, water-quality, hydrology, and geomechanics of the Cuyama Valley groundwater basin, California, 2008--12

To assess the water resources of the Cuyama Valley groundwater basin in Santa Barbara County, California, a series of cooperative studies were undertaken by the U.S. Geological Survey and the Santa Barbara County Water Agency. Between 2008 and 2012, geologic, water-quality, hydrologic and geomechanical data were collected from selected sites throughout the Cuyama Valley groundwater basin. Geologic data were collected from three multiple-well groundwater monitoring sites and included lithologic descriptions of the drill cuttings, borehole geophysical logs, temperature logs, as well as bulk density and sonic velocity measurements of whole-core samples. Generalized lithologic characterization from the monitoring sites indicated the water-bearing units in the subsurface consist of unconsolidated to partly consolidated sand, gravel, silt, clay, and occasional cobbles within alluvial fan and stream deposits. Analysis of geophysical logs indicated alternating layers of finer- and coarser-grained material that range from less than 1 foot to more than 20 feet thick. On the basis of the geologic data collected, the principal water-bearing units beneath the monitoring-well sites were found to be composed of younger alluvium of Holocene age, older alluvium of Pleistocene age, and the Tertiary-Quaternary Morales Formation. At all three sites, the contact between the recent fill and younger alluvium is approximately 20 feet below land surface. Water-quality samples were collected from 12 monitoring wells, 27 domestic and supply wells, 2 springs, and 4 surface-water sites and were analyzed for a variety of constituents that differed by site, but, in general, included trace elements; nutrients; dissolved organic carbon; major and minor ions; silica; total dissolved solids; alkalinity; total arsenic and iron; arsenic, chromium, and iron species; and isotopic tracers, including the stable isotopes of hydrogen and oxygen, activities of tritium, and carbon-14 abundance. Of the 39 wells sampled, concentrations of total dissolved solids and sulfate from 38 and 37 well samples, respectively, were greater than the U.S. Environmental Protection Agency’s secondary maximum contaminant levels. Concentrations greater than the maximum contaminant levels for nitrate were observed in five wells and were observed for arsenic in four wells. Differences in the stable-isotopic values of hydrogen and oxygen among groundwater samples indicated that water does not move freely between different formations or between different zones within the Cuyama Valley. Variations in isotopic composition indicated that recharge is derived from several different sources. The age of the groundwater, expressed as time since recharge, was between 600 and 38,000 years before present. Detectable concentrations of tritium indicated that younger water, recharged since the early 1950s, is present in parts of the groundwater basin. Hydrologic data were collected from 12 monitoring wells, 56 domestic and supply wells, 3 surface-water sites, and 4 rainfall-gaging stations. Rainfall in the valley averaged about 8 inches annually, whereas the mountains to the south received between 12 and 19 inches. Stream discharge records showed seasonal variability in surface-water flows ranging from no-flow to over 1,500 cubic feet per second. During periods when inflow to the valley exceeds outflow, there is potential recharge from stream losses to the groundwater system Water-level records included manual quarterly depth-to-water measurements collected from 68 wells, time-series data collected from 20 of those wells, and historic water levels from 16 wells. Hydrographs of the manual measurements showed declining water levels in 16 wells, mostly in the South-Main zone, and rising water levels in 14 wells, mostly in the Southern Ventucopa Uplands. Time-series hydrographs showed daily, seasonal, and longer-term effects associated with local pumping. Water-level data from the multiple-well monitoring sites indicated seasonal fluctuations as great as 80 feet and water-level differences between aquifers as great as 40 feet during peak pumping season. Hydrographs from the multiple-well groundwater monitoring sites showed vertical hydraulic gradients were upward during the winter months and downward during the irrigation season. Historic hydrographs showed water-level declines in the Southern-Main, Western Basin, Caliente Northern-Main, and Southern Sierra Madre zone ranging from 1 to 7 feet per year. Hydrographs of wells in the Southern Ventucopa Uplands zone showed several years with marked increases in water levels that corresponded to increased precipitation in the Cuyama Valley. Investigation of hydraulic properties included hydraulic conductivity and transmissivity estimated from aquifer tests performed on 63 wells. Estimates of horizontal hydraulic conductivity ranged from about 1.5 to 28 feet per day and decreased with depth. The median estimated hydraulic conductivity for the older alluvium was about five times that estimated for the Morales Formation. Estimates of transmissivity ranged from 560 to 163,400 gallons per day per foot and decreased with depth. The median estimated transmissivity for the younger alluvium was about three times that estimated for the older alluvium. Geomechanical analysis included land-surface elevation changes at five continuously operating global positioning systems (GPS) and land-subsidence detection at five interferometric synthetic aperture radar (InSAR) reference points. Analysis of data collected from continuously operating GPS stations showed the mountains to the south and west moved upward about 1 millimeter (mm) annually, whereas the station in the center of the Southern-Main zone moved downward more than 7 mm annually, indicating subsidence. It is likely that this subsidence is inelastic (permanent) deformation and indicates reduced storage capacity in the aquifer sediments. Analysis of InSAR data showed local and regional changes that appeared to be dependent, in part, on the time span of the interferogram, seasonal variations in pumping, and tectonic uplift. Long-term InSAR time series showed a total maximum detected subsidence rate of approximately 12 mm per year at one location and approximately 8 mm per year at a second location, while short-term InSAR time series showed maximum subsidence of about 15 mm at one location and localized maximum uplift of about 10 mm at another location.

California↗