The sea birds of Culebra and its adjacent islands, Puerto Rico
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Living Bird↗
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Overview of avian toxicity studies for the Deepwater Horizon Natural Resource Damage Assessment
The Oil Pollution Act of 1990 establishes liability for injuries to natural resources because of the release or threat of release of oil. Assessment of injury to natural resources resulting from an oil spill and development and implementation of a plan for the restoration, rehabilitation, replacement or acquisition of natural resources to compensate for those injuries is accomplished through the Natural Resource Damage Assessment (NRDA) process. The NRDA process began within a week of the Deepwater Horizon oil spill, which occurred on April 20, 2010. During the spill, more than 8500 dead and impaired birds representing at least 93 avian species were collected. In addition, there were more than 3500 birds observed to be visibly oiled. While information in the literature at the time helped to identify some of the effects of oil on birds, it was not sufficient to fully characterize the nature and extent of the injuries to the thousands of live oiled birds, or to quantify those injuries in terms of effects on bird viability. As a result, the US Fish and Wildlife Service proposed various assessment activities to inform NRDA injury determination and quantification analyses associated with the Deepwater Horizon oil spill, including avian toxicity studies. The goal of these studies was to evaluate the effects of oral exposure to 1–20 ml of artificially weathered Mississippi Canyon 252 oil kg bw -1 day -1 from one to 28 days or one to five applications of oil to 20% of the bird's surface area. It was thought that these exposure levels would not result in immediate or short-term mortality but might result in physiological effects that ultimately could affect avian survival, reproduction and health. These studies included oral dosing studies, an external dosing study, metabolic and flight performance studies and field-based flight studies. Results of these studies indicated changes in hematologic endpoints including formation of Heinz bodies and changes in cell counts. There were also effects on multiple organ systems, cardiac function and oxidative status. External oiling affected flight patterns and time spent during flight tasks indicating that migration may be affected by short-term repeated exposure to oil. Feather damage also resulted in increased heat loss and energetic demands. The papers in this special issue indicate that the combined effects of oil toxicity and feather effects in avian species, even in the case of relatively light oiling, can significantly affect the overall health of birds.
Ecotoxicology and Environmental Safety↗
Food availability is expressed through physiological stress indicators in nestling white ibis: A food supplementation experiment
1. Physiological responses to environmental stress such as adrenocortical hormones and cellular stress proteins have recently emerged as potentially powerful tools for investigating physiological effects of avian food limitation. However, little is known about the physiological stress responses of free‐living nestling birds to environmental variation in food availability. 2. We experimentally tested how hydrologically mediated changes in food availability affect the physiological stress responses of juvenile white ibises Eudocimus albus in a fluctuating wetland. We provided supplementary food to free‐living nestlings during 2 years with contrasting hydrologic and food availability conditions, and used plasma (PCORT) and faecal (FCORT) corticosterone and heat shock proteins (HSP60 and HSP70) from first‐hatched (A‐nestlings) and second‐hatched (B‐nestlings) to detect relatively short‐ to long‐term responses to food limitation. 3. Nestling physiological stress responses were relatively low in all treatments during the year with optimal food availability, but PCORT, FCORT and HSP60 levels increased during the poor food year. FCORT and HSP60 responses were clearly due to nutritional condition as elevated concentrations were evident primarily in control nestlings. Significant year by hatch order interactions for both FCORT and HSP60 revealed that these increases were largely incurred by B‐nestlings. FCORT and HSP60 responses were also well developed early in neonatal development and remained elevated for the duration of the experiment suggesting a chronic stress response. PCORT and HSP70 were less informative stress responses. 4. The nutritionally mediated increases in FCORT and HSP60 provide compelling evidence that white ibis nestlings can be physiologically affected by environmental food levels. FCORT and HSP60 are effective indicators of nutritional mediated stress for nestling white ibises and potentially for other species prone to capture or handling stress.
Florida↗
Waterfowl botulism--a brief summary
Botulism is a food poisoning caused by the ingestion of the toxin produced by the bacterium Clostridium botulinum of any of six strains, designated A through F. The disease, as it occurs in epidemic proportion in wild birds, is most commonly of the C type, although outbreaks caused by type E botulism have been observed on the Great Lakes. C. botulinum is a widely distributed anaerobic bacterium which is capable of existence for many years in spore form. Its vegetative cells grow and synthesize toxin, whenever and wherever the proper conditions exist in their environment. Outbreaks of botulism occur when aquatic birds consume this toxin which has been preformed in their food. Botulism is, therefore, an intoxication rather than an infection and is not a contagious disease. Botulism can be diagnosed conclusively only by demonstration of the toxin in the blood or serum of live affected birds, and a diagnostic laboratory should be contacted to confirm field diagnoses. A conclusive diagnosis cannot be reached by demonstrating the toxin or the organism in dead animals. The 'microenvironment concept' assumes that C. botulinum produces toxin in small, discrete, particulate food items which provide the requirements for growth of the bacteria independent of the surrounding wetland environment and which protect the toxin from dilution or inactivation. Optimum conditions for C. botulinum growth and toxin production include the absence of oxygen, a temperature of 76 deg. to 98 deg. F and suitable organic media, especially those composed of animal protein. Such conditions may be met in decaying invertebrate carcasses even though external conditions are unfavorable for toxin production. Vertebrate carcasses also may provide suitable conditions for the production of toxin, and maggots collected from duck carcasses during botulism outbreaks frequently contain extremely high levels of toxin. In determining the specific source of toxin and recommending control measures in the dynamic, complex, and diverse conditions of specific wetland ecosystem where botulism occurs, one's conclusions must necessarily become more speculative. Possibilities for reducing waterfowl losses due to botulism--Complete elimination of the causative organism, C. botulinum , from the wetland ecosystem is neither practical nor possible. Control methods may sometimes be profitably directed at prevention of toxin production, and the quantity of suitable media can be influenced. Rising water levels may drown terrestrial invertebrates, or flood vegetation thereby releasing nutrients which stimulate the increase in aquatic invertebrate populations to unstable levels which collapse. In other situations decreasing water levels may increase the numbers of invertebrate carcasses by increasing water temperatures or salinity which had been marginal for survival of previously thriving invertebrate populations or by stranding invertebrates on mud flats subject to periodic wind flooding. Therefore, a basic and important step in controlling botulism is stabilization of the wetland ecosystem in order to avoid the accumulation of decaying animal protein, especially during periods when temperatures are favorable for toxin production in these media. This can sometimes be accomplished by water level manipulation. If toxin production cannot be controlled by reducing the quantity of suitable media, another step is to prevent the ingestion of the toxic food items. Birds may be chased or lured from areas of toxin source or areas can be made less attractive by rapid and complete drainage, or draw down to a stable shoreline, where wind flooding does not occur. Removal of vertebrate carcasses, especially those of birds dying during the outbreak, reduces the availability of toxic maggots but carcass removal must be carried out frequently and diligently.Prevention of the effects of the toxin can be accomplished in some instances. Some degree of active immunity can be produced by injections of specific toxoi
Report↗
High rates of detection of Clade 2.3.4.4 Highly Pathogenic Avian Influenza H5 viruses in wild birds in the Pacific Northwest during the winter of 2014-2015
In 2014, Clade 2.3.4.4 H5N8 highly pathogenic avian influenza (HPAI) viruses spread across the Republic of Korea and ultimately were reported in China, Japan, Russia and Europe. Mortality associated with a reassortant HPAI H5N2 virus was detected in poultry farms in Western Canada at the end of November. The same strain (with identical genetic structure) was then detected in free-living wild birds that had died prior to December 8 of unrelated causes in Whatcom County, Washington, USA in an area contiguous with the index Canadian location. A gyrfalcon (Falco rusticolus) that had hunted and fed on an American wigeon (Anas americana) on December 6 in the same area and died two days later, tested positive for the Eurasian origin HPAI H5N8. Subsequently, an Active Surveillance Program using hunter-harvest waterfowl in Washington and Oregon detected ten HPAI H5 viruses, of three different subtypes (four H5N2, three H5N8 and three H5N1) with 4 segments in common (HA, PB2, NP and MA). In addition, a mortality-based Passive Surveillance Program detected 18 HPAI (14 H5N2 and four H5N8) cases from Idaho, Kansas, Oregon, Minnesota, Montana, Washington and Wisconsin. Comparatively, mortality-based passive surveillance appears to be detecting these HPAI infections at a higher rate than active surveillance during the period following initial introduction into the US.
Avian Diseases↗
Net selectivity on the Great Lakes
Two experiments, using 784 bobwhite quail chicks, were conducted at the Patuxent Research Refuge, Bowie, Maryland, to find a growing diet that would meet wartime restrictions. In 1941 a diet containing 14 per cent sardine fish meal was formulated and gave satisfactory results from the standpoints of survival and growth. Since fish meal now is scarce, search was made for a diet without war-restricted commodities yet equal to the above-mentioned diet in feeding value. Ten diets were compared.....In the present experiments, quail fed this same diet modified by the substitution of 0.12 per cent of D-activated sterol for vitamin A and D feeding oil fortified showed the highest survival and the best live weights at the end of both the sixth and tenth weeks. They also were among the top three groups in requiring the least quantity of feed per unit of gain in weight; however, they consumed the greatest quantity of feed.....Of the other nine diets, that which seemed most promising, considering survival, live weight, and efficiency of feed utilization, was as follows (parts by weight) : Yellow corn, ground 26.08...Millet, ground 10.00...Alfalfa leaf meal, dehydrated 7.50...Soybean oil meal, solvent-processed 50.00...Dried whey 3.00...Special steamed bonemeal 1.50...Limestone, ground 0.80...Salt mixture 1.OO...D-activated animal sterol 0.12....100.00.....At the end of ten weeks the results on this diet (Diet l l ) , as compared with that containing sardine meal (Diet 23), were as follows: Diet No. 11 Percentage survival 71, Average live weight per bird, grams 144,....Growing mash consumed, per bird-day, grams 6.8 Feed consumed per gram of gain in weight (grams) 3.8......Diet 23....Percentage survival, 80,...Avg live weight per bird, grams....145,....Growing mash consumed , per bird-day, grams...7.4...Feed consumed per gram of gain in weight (grams)....3.9. Results were unsatisfactory when expeller-processed soybean oil meal was used in this diet to replace solvent-processed meal. At the end of ten weeks only 60 per cent of the quail survived and the average live weight was only 138 grams.....When the level of dried whey was raised to 5 per cent to provide a margin of safety against abnormal feather growth (resulting partly from riboflavin deficiency), the number of survivals was nearly as high as on the diet containing 14 per cent sardine meal, but the average live weight per bird was only 139 grams. The difference between this weight and that for the birds on Diet 11 (3% dried whey) was not statistically significant.....The general rating for the diet was as high as that for Diet 11, when ground wheat replaced ground millet in the diet containing 3 per cent dried whey. Survival of birds was 5 per cent-units lower, the average live weight was about the same, and efficiency of feed utilization was higher.....Using D-activated animal sterol as a source of vitamin D and yellow corn and a good grade of alfalfa leaf meal as sources of vitamin A, fish oils were omitted from the diets without causing symptons of avitaminosis. However because of the instability of vitamin A in storage, it is advisable to include sufficient fish oil, if obtainable, in quail diets to supply at least 2,000 I. U. of vitamin A per pound of feed on a total feed basis.
Gold Medal Netting News↗
Low pathogenic avian influenza viruses in wild migratory waterfowl in a region of high poultry production, Delmarva, Maryland
Migratory waterfowl are natural reservoirs for low pathogenic avian influenza viruses (AIVs) and may contribute to the long-distance dispersal of these pathogens as well as spillover into domestic bird populations. Surveillance for AIVs is critical to assessing risks for potential spread of these viruses among wild and domestic bird populations. The Delmarva Peninsula on the east coast of the United States is both a key convergence point for migratory Atlantic waterfowl populations and a region with high poultry production (>4,700 poultry meat facilities). Sampling of key migratory waterfowl species occurred at 20 locations throughout the Delmarva Peninsula in fall and winter of 2013–14. Samples were collected from 400 hunter-harvested or live-caught birds via cloacal and oropharyngeal swabs. Fourteen of the 400 (3.5%) birds sampled tested positive for the AIV matrix gene using real-time reverse transcriptase PCR, all from five dabbling duck species. Further characterization of the 14 viral isolates identified two hemagglutinin (H3 and H4) and four neuraminidase (N2, N6, N8, and N9) subtypes, which were consistent with isolates reported in the Influenza Research Database for this region. Three of 14 isolates contained multiple HA or NA subtypes. This study adds to the limited baseline information available for AIVs in migratory waterfowl populations on the Delmarva Peninsula, particularly prior to the highly pathogenic AIV A(H5N8) and A(H5N2) introductions to the United States in late 2014.
Delaware, Maryland↗
Modelling effects of chemical exposure on birds wintering in agricultural landscapes: The western burrowing owl ( Athene cunicularia hypugaea ) as a case study
We describe an ecotoxicological model that simulates the sublethal and lethal effects of chronic, low-level, chemical exposure on birds wintering in agricultural landscapes. Previous models estimating the impact on wildlife of chemicals used in agro-ecosystems typically have not included the variety of pathways, including both dermal and oral, by which individuals are exposed. The present model contains four submodels simulating (1) foraging behavior of individual birds, (2) chemical applications to crops, (3) transfers of chemicals among soil, insects, and small mammals, and (4) transfers of chemicals to birds via ingestion and dermal exposure. We demonstrate use of the model by simulating the impacts of a variety of commonly used herbicides, insecticides, growth regulators, and defoliants on western burrowing owls ( Athene cunicularia hypugaea ) that winter in agricultural landscapes in southern Texas, United States. The model generated reasonable movement patterns for each chemical through soil, water, insects, and rodents, as well as into the owl via consumption and dermal absorption. Sensitivity analysis suggested model predictions were sensitive to uncertainty associated with estimates of chemical half-lives in birds, soil, and prey, sensitive to parameters associated with estimating dermal exposure, and relatively insensitive to uncertainty associated with details of chemical application procedures (timing of application, amount of drift). Nonetheless, the general trends in chemical accumulations and the relative impacts of the various chemicals were robust to these parameter changes. Simulation results suggested that insecticides posed a greater potential risk to owls of both sublethal and lethal effects than do herbicides, defoliants, and growth regulators under crop scenarios typical of southern Texas, and that use of multiple indicators, or endpoints provided a more accurate assessment of risk due to agricultural chemical exposure. The model should prove useful in helping prioritize the chemicals and transfer pathways targeted in future studies and also, as these new data become available, in assessing the relative danger to other birds of exposure to different types of agricultural chemicals.
Texas↗
Changing levels of heavy metal accumulation in birds at Tumacacori National Historic Park along the Upper Santa Cruz River Watershed in southern Arizona
National Parks and other protected areas can be influenced by contamination from outside their boundaries. This is particularly true of smaller parks and those in riparian ecosystems, a habitat that in arid environments provides critical habitat for breeding, migratory, and wintering birds. Animals living in contaminated areas are susceptible to adverse health effects as a result of long-term exposure and bioaccumulation of heavy metals. We investigated the distribution and cascading extent of heavy metal accumulation in Song Sparrows (Melospiza melodia) at Tumacacori National Historic Park (TUMA) along the upper Santa Cruz River watershed in southern Arizona. This study had three goals: (1) quantify the concentrations and distributional patterns of heavy metals in blood and feathers of Song Sparrows at Tumacacori National Historic Park, (2) quantify hematocrit values, body conditions (that is, residual body mass), and immune conditions of Song Sparrows in the park (3) compare our findings with prior studies at the park to assess the extent of heavy metal accumulation in birds at downstream sites after the 2009 wastewater treatment plant upgrade, and (4) quantify concentrations and distributional patterns of heavy metals in blood and feathers of Song Sparrows among six study sites throughout the upper Santa Cruz River watershed. This study design would allow us to more accurately assess song sparrow condition and blood parameters among sites with differing potential sources of contamination exposure, and how each location could have contributed to heavy metal levels of birds in the park.
Conference Paper↗
A genetic signature of the evolution of loss of flight in the Galapagos cormorant
INTRODUCTION Changes in the size and proportion of limbs and other structures have played a key role in the evolution of species. One common class of limb modification is recurrent wing reduction and loss of flight in birds. Indeed, Darwin used the occurrence of flightless birds as an argument in favor of his theory of natural selection. Loss of flight has evolved repeatedly and is found among 26 families of birds in 17 different orders. Despite the frequency of these modifications, we have a limited understanding of their underpinnings at the genetic and molecular levels. RATIONALE To better understand the evolution of changes in limb size, we studied a classic case of recent loss of flight in the Galapagos cormorant ( Phalacrocorax harrisi ). Cormorants are large water birds that live in coastal areas or near lakes, and P. harrisi is the only flightless cormorant among approximately 40 extant species. The entire population is distributed along the coastlines of Isabela and Fernandina islands in the Galapagos archipelago. P. harrisi has a pair of short wings, which are smaller than those of any other cormorant. The extreme reduction of the wings and pectoral skeleton observed in P. harrisi is an attractive model for studying the evolution of loss of flight because it occurred very recently; phylogenetic evidence suggests that P. harrisi diverged from its flighted relatives within the past 2 million years. We developed a comparative and predictive genomics approach that uses the genome sequences of P. harrisi and its flighted relatives to find candidate genetic variants that likely contributed to the evolution of loss of flight. RESULTS We sequenced and de novo assembled the whole genomes of P. harrisi and three closely related flighted cormorant species. We identified thousands of coding variants exclusive to P. harrisi and classified them according to their probability of altering protein function based on conservation. Variants most likely to alter protein function were significantly enriched in genes mutated in human skeletal ciliopathies, including Ofd1 , Evc , Wdr34 , and Ift122 . We carried out experiments in Caenorhabditis elegans to confirm that a missense variant present in the Galapagos cormorant IFT122 protein is sufficient to affect ciliary function. The primary cilium is essential for Hedgehog (Hh) signaling in vertebrates, and individuals affected by ciliopathies have small limbs and ribcages, mirroring the phenotype of P. harrisi . We also identified a 4–amino acid deletion in the regulatory domain of Cux1 , a highly conserved transcription factor that has been experimentally shown to regulate limb growth in chicken. The four missing amino acids are perfectly conserved in all birds and mammals sequenced to date. We tested the consequences of this deletion in a chondrogenic cell line and showed that it impairs the ability of CUX1 to transcriptionally up-regulate cilia-related genes (some of which contain function-altering variants in P. harrisi ) and to promote chondrogenic differentiation. Finally, we show that positive selection may have played a role in the fixation of the variants associated with loss of flight in P. harrisi . CONCLUSION Our results indicate that the combined effect of variants in genes necessary for the correct transcriptional regulation and function of the primary cilium likely contributed to the evolution of highly reduced wings and other skeletal adaptations associated with loss of flight in P. harrisi . Our approach may be generally useful for identification of variants underlying evolutionary novelty from genomes of closely related species.
Science↗
Confirmation of diving and swimming behavior in the Sora (Porzana carolina)
We first observed Sora ( Porzana carolina ) swimming and diving under water while capturing them with hand nets at night. Since that time, we have observed the behavior several times and documented it with photos and video. Rails are among the most elusive birds. Despite living in wetlands, water depth has often been discussed as a factor limiting habitat use by rails, with the assumption that when water levels are too deep, rails walk on top of floating or emergent vegetation. Here we present new photo and video evidence that confirms previous observations that Sora are adept at swimming and diving in deep water wetland environments, which should alter how we think about their ability to avoid predators and use deeper water habitats.
Wilson Journal of Ornithology↗
Survival of breeding Pacific common eiders on the Yukon-Kuskokwim Delta, Alaska
Populations of Pacific common eiders ( Somateria mollissima v-nigrum ) breeding in Alaska, USA, have declined markedly over the past 40 years. We studied survival of adult female Pacific common eiders using capture—recapture of nesting hens at 3 sites on the Yukon-Kuskokwim Delta (YKD), Alaska from 1994 to 2004. We used data consisting of 268 recapture events from 361 uniquely marked individuals to investigate temporal, geographic, and environmental variation in adult female survival. Our results suggest apparent annual survival of adult eiders from the YKD was high (0.892, SE = 0.022) and spatially and temporally invariant (σ 2 = 0.005), a pattern consistent with other long-lived marine birds. Moreover, our results suggest adult survival may be functionally fixed for Pacific common eiders, and at the present, adult survival may be relatively unresponsive to environmental or management perturbations. Our data did not support hypothesized variation in survival relative to mortality factors such as predation on breeding grounds, physiologic costs of reproduction, and wintering conditions. Although changes in adult survival likely have a large potential effect on prospective population growth, our results suggest viable management actions aimed at increasing survival may be extremely limited.
Journal of Wildlife Management↗
Newcastle disease
Newcastle Disease (ND) in domestic poultry is a focus for concern throughout much of the world’s agricultural community because of severe economic losses that have occurred from illness, death, and reduced egg production following infection with pathogenic or disease causing strains. Prior to 1990, this disease had rarely been reported as a cause of mortality in the free-living native birds of the United States or Canada. Repeated large-scale losses of double-crested cormorants from ND in both countries has resulted in a need for enhanced awareness of ND as a disease of wild birds and, therefore, its inclusion within this Manual. Background information about ND in poultry is needed to provide a perspective for understanding the complexity of the disease agent, Newcastle disease virus (NDV). Some general information about ND in other avian species is also provided, but the primary focus for this chapter is the effect of NDV on double-crested cormorants.
Information and Technology Report↗
Some observations on habitats of the Swainson's warbler
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Living Bird↗
A comparative study of mollusk predation by limpkins, Everglade kites, and boat-tailed grackles
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Living Bird↗
Breeding biology of swallow-tailed kites in Florida
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Living Bird↗
The distribution and ecology of the Puerto Rican whip-poor-will, an endangered species
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Living Bird↗
Biology and conservation of the Bahama parrot
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Living Bird↗