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Results for “Journal of Morphology”

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At least 73 records · Page 4Linked to original sources
USGS2014

Body morphology differs in wild juvenile Chinook salmon Oncorhynchus tshawytscha in the Willamette River, Oregon, USA

Body morphology of juvenile Chinook salmon Oncorhynchus tshawytscha in the upper Willamette River, Oregon, U.S.A., was analysed to determine if variation in body shape is correlated with migratory life-history tactics followed by juveniles. Body shape was compared between migrating juveniles that expressed different life-history tactics, i.e . autumn migrants and yearling smolts, and among parr sampled at three sites along a longitudinal river gradient. In the upper Willamette River, the expression of life-history tactics is associated with where juveniles rear in the basin with fish rearing in downstream locations generally completing ocean ward migrations earlier in life than fish rearing in upstream locations. The morphological differences that were apparent between autumn migrants and yearling smolts were similar to differences between parr rearing in downstream and upstream reaches, indicating that body morphology is correlated with life-history tactics. Autumn migrants and parr from downstream sampling sites had deeper bodies, shorter heads and deeper caudal peduncles compared with yearling smolts and parr from the upstream sampling site. This study did not distinguish between genetic and environmental effects on morphology; however, the results suggest that downstream movement of juveniles soon after emergence is associated with differentiation in morphology and with the expression of life-history variation.

Oregon↗
USGS2004

Genetic methods improve accuracy of gender determination in beaver

Gender identification of sexually monomorphic mammals can be difficult. We used analysis of zinc-finger protein (Zfx and Zfy) DNA regions to determine gender of 96 beavers ( Castor canadensis ) from 3 areas and used these results to verify gender determined in the field. Gender was correctly determined for 86 (89.6%) beavers. Incorrect assignments were not attributed to errors in any one age or sex class. Although methods that can be used in the field (such as morphological methods) can provide reasonably accurate gender assignments in beavers, the genetic method might be preferred in certain situations.

Journal of Mammalogy↗
USGS1996

Morphological plasticity following species-specific recognition and competition in two perennial grasses

Morphological characteristics and biomass allocation of two perennial grasses, Pseudoroegneria spicata (Pursh) A. Löve ssp. spicata (bluebunch wheatgrass) and Agropyron desertorum (Fisch. ex Link) Schult. (crested wheatgrass), were compared under different competition and nutrient treatments. The competitive responses of two plants grown in containers under field conditions were assessed in monocultures and mixtures in two experiments using different scales of nutrient application. In the Small-Scale Experiment, a localized fertilization was applied in the rooting zone between two plants; in the Large-Scale Experiment the entire container was supplied with nutrients. Agropyron responded more vigorously to fertilization than did Pseudoroegneria , but based on the relative performance of Agropyron in monoculture and mixture, it was not superior to Pseudoroegneria in resource competition. Pseudoroegneria was apparently able to recognize neighboring plants as either conspecifics or individuals of the other species. The responses included changes in shoot architecture, root morphology, and allocation between roots and shoots. Agropyron generally did not exhibit such morphological flexibility. In field plot plantings of 4-yr-old tussocks similar shoot differences were seen in Pseudoroegneria. There was, however, no indication of superior resource competition for Agropyron. Thus, any early advantage of Agropyron in vigorous growth of young plants in response to nutrients was apparently lost by the time the plants had reached this stage of development. Morphological and allocation flexibility of Pseudoroegneria may have compensated for slower, less vigorous growth. If species-specific recognition and morphological plasticity are common in nature, this complicates our attempts to understand mechanisms of competition.

American Journal of Botany↗
USGS1997

Perception of neighboring plants by rhizomes and roots: Morphological manifestations of a clonal plant

A previous study showed that clonal morphology of the rhizomatous grass Elymus lanceolatus ssp. lanceolatus (Scibner & J.G. Smith Gould) was influenced more by neighbouring root systems than by the local distribution of nutrients. In this study we determine whether individual rhizomes or roots of E . lanceolatus perceive neighbouring root systems and how this is manifested in morphological responses of E . lanceolatus clones. Elymus lanceolatus was grown in the same bin with Pseudoroegneria spicata (Pursh) A. Love or Agropyron desertorum (Fisch. ex Link) Schult. plants. Elymus lanceolatus was separated from its neighbours by different barriers. The barriers allowed either only E . lanceolatus roots; only a single E . lanceolatus primary rhizome; or both roots and rhizomes to contact the neighbour root system. When only a single E . lanceolatus primary rhizome with potentially developing branching rhizomes made contact with the neighbour, the clonal structure of E . lanceolatus was modified more with P . spicata as the neighbour than with A . desertorum . With root contact of E . lanceolatus alone there was a similar effect with the neighbouring plants, but there was a more marked inhibitory effect on E . lanceolatus clonal growth with P . spicata than with A . desertorum , compared with the treatment with only a single rhizome in contact with the neighbour. Root resource competition in the unconstrained treatment (roots and rhizomes) between neighbouring plant and E . lanceolatus was more apparent with A . desertorum than with P . spicata . This study is one of the first to document that rhizome and root contact of a clonal plant with its neighbours may induce different clonal responses depending on the species of neighbour. Key words : Agropyron desertorum , clonal morphology, Elymus lanceolatus ssp. lanceolatus , plant interference, plant contact, Pseudoroegneria spicata , rhizome structure, root systems.

Canadian Journal of Botany↗
USGS2024

Declines and shifts in morphological diversity of ciscoes (Coregonus spp.) in lakes Huron and Michigan, 1917–2019

Ciscoes ( Coregonus spp . ) were historically abundant and ecologically important in Laurentian Great Lakes ecosystems. Despite well-documented declines in their abundance and taxonomic diversity, declines in morphological diversity remain understudied. This knowledge gap is especially pertinent for lakes Michigan and Huron, which have each lost six of eight historical species. Improved understanding of historical and contemporary morphological diversity of Great Lakes ciscoes can inform ongoing restoration efforts and further elucidate the factors that contributed to declines. Our goal was to characterize shifts in morphological diversity of ciscoes in lakes Michigan and Huron over a century (1917–2019). We analyzed size-corrected morphometric and meristic measurements from three periods: Early (1917–1923), Middle (1950–1972), and Contemporary (2015–2019). We then identified morphologically distinct clusters while remaining agnostic to species identifications. We found that morphological diversity and the number of distinct clusters declined over time. We then leveraged species identifications to highlight key species losses and examine morphological shifts among extant species. Our findings provide insights into the historical and contemporary morphological diversity of ciscoes and will inform restoration efforts.

Lake Huron, Lake Michigan↗
USGS2020

Sensitivity of storm response to antecedent topography in the XBeach model

Antecedent topography is an important aspect of coastal morphology when studying and forecasting coastal change hazards. The uncertainty in morphologic response of storm-impact models and their use in short-term hazard forecasting and decadal forecasting is important to account for when considering a coupled model framework. This study provided a methodology to investigate uncertainty of profile response within the storm impact model XBeach related to varying antecedent topographies. A parameterized island Gaussian fit (PIGF) model generated an idealized baseline profile and a suite of idealized profiles that vary specific characteristics based on collated observed LiDAR data from Dauphin Island, AL, USA. Six synthetic storm scenarios were simulated on each of the idealized profiles with XBeach in both 1- and 2-dimensional setups and analyzed to determine the morphological response and uncertainty related to the varied antecedent topographies. Profile morphologic response tends to scale with storm magnitude but among the varied profiles there is greater uncertainty in profile response to the medium range storm scenarios than to the low and high magnitude storm scenarios. XBeach can be highly sensitive to morphologic thresholds, both antecedent and time-varying, especially with regards to beach slope.

Alabama↗
USGS2010

Bathymetry and absorptivity of Titan's Ontario Lacus

Ontario Lacus is the largest and best characterized lake in Titan's south polar region. In June and July 2009, the Cassini RADAR acquired its first Synthetic Aperture Radar (SAR) images of the area. Together with closest approach altimetry acquired in December 2008, these observations provide a unique opportunity to study the lake's nearshore bathymetry and complex refractive properties. Average radar backscatter is observed to decrease exponentially with distance from the local shoreline. This behavior is consistent with attenuation through a deepening layer of liquid and, if local topography is known, can be used to derive absorptive dielectric properties. Accordingly, we estimate nearshore topography from a radar altimetry profile that intersects the shoreline on the East and West sides of the lake. We then analyze SAR backscatter in these regions to determine the imaginary component of the liquid's complex index of refraction (κ). The derived value, κ = (6.1 −1.3 +1.7 ) × 10 −4 , corresponds to a loss tangent of tan Δ = (9.2 −2.0 +2.5 ) × 10 −4 and is consistent with a composition dominated by liquid hydrocarbons. This value can be used to test compositional models once the microwave optical properties of candidate materials have been measured. In areas that do not intersect altimetry profiles, relative slopes can be calculated assuming the index of refraction is constant throughout the liquid. Accordingly, we construct a coarse bathymetry map for the nearshore region by measuring bathymetric slopes for eleven additional areas around the lake. These slopes vary by a factor of ∼5 and correlate well with observed shoreline morphologies.

Journal of Geophysical Research E: Planets↗
USGS1971

Giant American brook lampreys, Lampetra lamottei , in the upper Great Lakes

Five female American brook lampreys, Lampetra lamottei , collected in lakes Michigan and Huron averaged nearly twice as long and about six times as heavy as American brook lampreys of normal size. Three factors suggested that the giant lampreys may have fed parasitically after metamorphosis: morphological adaptations of the species for parasitic life, their large size, and absence of extremely large ammocetes among a million sampled.

Journal of the Fisheries Research Board of Canada↗
USGS2003

Temperature, pressure, and compositional effects on anomalous or "self" preservation of gas hydrates

We previously reported on a thermal regime where pure, polycrystalline methane hydrate is preserved metastably in bulk at up to 75 K above its nominal temperature stability limit of 193 K at 0.1 MPa, following rapid release of the sample pore pressure. Large fractions (>50 vol.%) of methane hydrate can be preserved for 2-3 weeks by this method, reflecting the greatly suppressed rates of dissociation that characterize this "anomalous preservation" regime. This behavior contrasts that exhibited by methane hydrate at both colder (193-240 K) and warmer (272-290 K) isothermal test conditions, where dissociation rates increase monotonically with increasing temperature. Here, we report on recent experiments that further investigate the effects of temperature, pressure, and composition on anomalous preservation behavior. All tests conducted on sI methane hydrate yielded self-consistent results that confirm the highly temperature-sensitive but reproducible nature of anomalous preservation behavior. Temperature-stepping experiments conducted between 250 and 268 K corroborate the relative rates measured previously in isothermal preservation tests, and elevated pore-pressure tests showed that, as expected, dissociation rates are further reduced with increasing pressure. Surprisingly, sII methane-ethane hydrate was found to exhibit no comparable preservation effect when rapidly depressurized at 268 K, even though it is thermodynamically stable at higher temperatures and lower pressures than sI methane hydrate. These results, coupled with SEM imaging of quenched sample material from a variety of dissociation tests, strongly support our earlier arguments that ice-"shielding" effects provided by partial dissociation along hydrate grain surfaces do not serve as the primary mechanism for anomalous preservation. The underlying physical-chemistry mechanism(s) of anomalous preservation remains elusive, but appears to be based more on textural or morphological changes within the hydrate material itself, rather than on compositional zoning or ice-rind development.

Canadian Journal of Physics↗
USGS1978

A reexamination of the Pennsylvanian trace fossil Olivellites

The original interpretation of Olivellites plummeri Fenton and Fenton as the trace of an infaunal gastropod, is reconsidered and rejected. The original slab bearing several examples of O. plummeri has been reexamined and reillustrated. The slab came from the type-locality of O. plummeri in Eastland County, Tex., and is a shallow sub tidal sandstone of the Graham Formation; the sandstone, which has yielded additional specimens, is presumably a reworked delta-front deposit. Olivellites was also observed in the Caddo Creek Formation in Stephens County, Tex., but, to date, it has not been found elsewhere in north-central Texas. Interpretation of Paleozoic ichnofossils by analogy with modern traces is limited; behavioral characteristics may be the products of post-Paleozoic innovation. The internal morphology and path of Olivellites are unlike those of any modern gastropod trail, and the genus is removed from the Mollusca.

Texas↗
USGS2008

Temporal downscaling of decadal sediment load estimates to a daily interval for use in hindcast simulations

In this study we used hydrologic proxies to develop a daily sediment load time-series, which agrees with decadal sediment load estimates, when integrated. Hindcast simulations of bathymetric change in estuaries require daily sediment loads from major tributary rivers, to capture the episodic delivery of sediment during multi-day freshwater flow pulses. Two independent decadal sediment load estimates are available for the Sacramento/San Joaquin River Delta, California prior to 1959, but they must be downscaled to a daily interval for use in hindcast models. Daily flow and sediment load data to the Delta are available after 1930 and 1959, respectively, but bathymetric change simulations for San Francisco Bay prior to this require a method to generate daily sediment load estimates into the Delta. We used two historical proxies, monthly rainfall and unimpaired flow magnitudes, to generate monthly unimpaired flows to the Sacramento/San Joaquin Delta for the 1851-1929 period. This step generated the shape of the monthly hydrograph. These historical monthly flows were compared to unimpaired monthly flows from the modern era (1967-1987), and a least-squares metric selected a modern water year analogue for each historical water year. The daily hydrograph for the modern analogue was then assigned to the historical year and scaled to match the flow volume estimated by dendrochronology methods, providing the correct total flow for the year. We applied a sediment rating curve to this time-series of daily flows, to generate daily sediment loads for 1851-1958. The rating curve was calibrated with the two independent decadal sediment load estimates, over two distinct periods. This novel technique retained the timing and magnitude of freshwater flows and sediment loads, without damping variability or net sediment loads to San Francisco Bay. The time-series represents the hydraulic mining period with sustained periods of increased sediment loads, and a dramatic decrease after 1910, corresponding to a reduction in available mining debris. The analogue selection procedure also permits exploration of the morphological hydrograph concept, where a limited set of hydrographs is used to simulate the same bathymetric change as the actual set of hydrographs. The final daily sediment load time-series and morphological hydrograph concept will be applied as landward boundary conditions for hindcasting simulations of bathymetric change in San Francisco Bay.

California↗
USGS2014

The birth and death of transverse aeolian ridges on Mars

Transverse aeolian ridges (TARs) are small bright windblown deposits found throughout the Martian tropics that stand a few meters tall and are spaced a few tens of meters apart. The origin of these features remains mysterious more than 20 years after their discovery on Mars. This paper presents a new hypothesis, that some of the TARs could be indurated dust deposits emplaced millions of years ago during periods of higher axial obliquity. It suggests that these TARs are primary depositional bed forms that accumulated in place from dust carried by the winds in suspension, perhaps in a manner comparable to antidunes on Earth, and were subsequently indurated and eroded to their current states by eons of sandblasting. It points out examples of modern dust drifts and dune‐like features that appear to have been recently formed by dust accumulating directly onto the surface from atmospheric suspension. It shows how these pristine dust deposits could evolve to explain the range of morphologies of the TARs. Finally, it explains how the known properties of many TARs are consistent with this hypothesis, including their composition, thermal behavior, and distribution.

Journal of Geophysical Research E: Planets↗
USGS2016

Genetic analysis shows that morphology alone cannot distinguish asian carp eggs from those of other cyprinid species

Fish eggs and embryos (hereafter collectively referred to as “eggs”) were collected in the upper Mississippi River main stem (~300 km upstream of previously reported spawning by invasive Asian carp) during summer 2013. Based on previously published morphological characteristics, the eggs were identified as belonging to Asian carp. A subsample of the eggs was subsequently analyzed by using molecular methods to determine species identity. Genetic identification using the cytochrome-c oxidase 1 gene was attempted for a total of 41 eggs. Due to the preservation technique used (formalin) and the resulting DNA degradation, sequences were recovered from only 17 individual eggs. In all 17 cases, cyprinids other than Asian carp (usually Notropis sp.) were identified as the most likely species. In previously published reports, a key characteristic that distinguished Asian carp eggs from those of other cyprinids was size: Asian carp eggs exhibited diameters ranging from 4.0 to 6.0 mm and were thought to be much larger than the otherwise similar eggs of native species. Eggs from endemic cyprinids were believed to rarely reach 3.0 mm and had not been observed to exceed 3.3 mm. However, many of the eggs that were genetically identified as originating from native cyprinids were as large as 4.0 mm in diameter (at early developmental stages) and were therefore large enough to over- lap with the lower end of the size range observed for Asian carp eggs. Researchers studying the egg stages of Asian carp and other cyprinids should plan on preserving subsets of eggs for genetic analysis to confirm morphological identifications.

Upper Mississippi River↗
USGS2008

Wolf body mass cline across Minnesota related to taxonomy?

Recent genetic studies suggest that in northern Minnesota two species of wolves (Canis lupus L., 1758 or western wolf and Canis lycaon Schreber, 1775 (= Canis rufus Audubon and Bachman, 1851) or eastern wolf) meet and hybridize. However, little morphological information is available about these two types of wolves in Minnesota. We analyzed the mass of 950 female wolves and 1006 males older than 1 year from across northern Minnesota and found that it increased from 26.30 ?? 0.56 kg (mean ?? SE) for females and 30.60 ?? 0.72 kg for males in northeastern Minnesota to 30.01 ?? 0.43 kg for females and 35.94 ?? 0.45 kg for males in northwestern Minnesota (females: r2 = 0.79, P < 0.02; males: r2 = 0.63, P = 0.06). These mass differences add morphological information to the identities of eastern and western wolves and support the view that ranges of the two species meet in Minnesota. ?? 2008 NRC.

Canadian Journal of Zoology↗
USGS2020

Comparison of specimen- and image-based morphometrics in Cisco

Morphometric data from fish are typically generated using one of two methods: direct measurements made on a specimen or extraction of distances from a digital picture. We compared data on 12 morphometrics collected with these two methods on the same collection of Cisco Coregonus artedi from Lake Ontario, North America, to assess the degree of bias in measurements made directly on a specimen- vs. an image-based method. We also assessed the degree of reproducibility within the image-based method by evaluating the amount of variation between different analysts for each morphometric method. Our results indicate specific morphometrics may be more prone to bias across the two methods and between analysts. Four of 12 morphometrics evaluated showed significant deviation from a 1:1 relationship that would be expected if the imaged-based method produced accurate specimen-based measurements. Pelvic fin length and pelvic–anal fin distance had the highest between-analyst variation for image-based landmarks, indicating low reproducibility for these metrics, compared with pectoral fin or total length, which had lower between-analyst variation. Although some morphometric measurements can be accurately obtained with either method, and therefore potentially used interchangeably in studies on Cisco morphology, our findings highlight the importance of considering method bias in morphometric studies that use data collected by different methods.

Journal of Fish and Wildlife Management↗
USGS2013

Linking morphodynamic response with sediment mass balance on the Colorado River in Marble Canyon: issues of scale, geomorphic setting, and sampling design

Measurements of morphologic change are often used to infer sediment mass balance. Such measurements may, however, result in gross errors when morphologic changes over short reaches are extrapolated to predict changes in sediment mass balance for long river segments. This issue is investigated by examination of morphologic change and sediment influx and efflux for a 100 km segment of the Colorado River in Grand Canyon, Arizona. For each of four monitoring intervals within a 7 year study period, the direction of sand-storage response within short morphologic monitoring reaches was consistent with the flux-based sand mass balance. Both budgeting methods indicate that sand storage was stable or increased during the 7 year period. Extrapolation of the morphologic measurements outside the monitoring reaches does not, however, provide a reasonable estimate of the magnitude of sand-storage change for the 100 km study area. Extrapolation results in large errors, because there is large local variation in site behavior driven by interactions between the flow and local bed topography. During the same flow regime and reach-average sediment supply, some locations accumulate sand while others evacuate sand. The interaction of local hydraulics with local channel geometry exerts more control on local morphodynamic response than sand supply over an encompassing river segment. Changes in the upstream supply of sand modify bed responses but typically do not completely offset the effect of local hydraulics. Thus, accurate sediment budgets for long river segments inferred from reach-scale morphologic measurements must incorporate the effect of local hydraulics in a sampling design or avoid extrapolation altogether.

Arizona↗
USGS2011

Patterns of morphological variation amongst semifossorial shrews in the highlands of Guatemala, with the description of a new species (Mammalia, Soricomorpha, Soricidae)

Members of the Cryptotis goldmani group of small-eared shrews (Mammalia, Soricomorpha, Soricidae) represent a clade within the genus that is characterized by modifications of the forelimb that include broadened forefeet, elongated and broadened foreclaws, and massive humeri with enlarged processes. These modifications are consistent with greater adaptation to their semifossorial habits than other members of the genus. The species in this group occur discontinuously in temperate highlands from southern Tamaulipas, Mexico, to Honduras. In Guatemala, there are three species: the relatively widespread Cryptotis goodwini and two species ( Cryptotis lacertosus , Cryptotis mam ) endemic to highland forests in the Sierra de los Cuchumatanes of western Guatemala. Ongoing studies focusing on the relationships of variation in cranial and postcranial skeletal morphology have revealed a fourth species from remnant cloud forest in the Sierra de Yalijux, central Guatemala. In this paper, I describe this new species and characterize its morphology relative to other species in the C. goldmani group and to other species of Cryptotis in Guatemala. In addition, I summarize available details of its habitat and ecology.

Zoological Journal of the Linnean Society↗
USGS2016

Eurytemora carolleeae in the Laurentian Great Lakes revealed by phylogenetic and morphological analysis

In the Laurentian Great Lakes, specimens of Eurytemora have been reported as Eurytemora affinis since its invasion in the late 1950s. During an intensive collection of aquatic invertebrates for morphological and molecular identification in Western Lake Erie in 2012-2013, several specimens of Eurytemora were collected. Analysis of these specimens identified them as the recently described species Eurytemora carolleeae Alekseev and Souissi 2011. This result led us to assess E. carolleeae’s identifying features, geographic distribution and historical presence in the Laurentian Great Lakes in view of its recent description in 2011. Cytochrome oxidase I (COI) DNA sequences of Eurytemora specimens were identified as closer (2 - 4% different) to recently described E. carolleeae than to most E. affinis sequences (14% different). Eurytemora from other areas of the Great Lakes and from North American rivers as far west as South Dakota (Missouri River) and east to Delaware (Christina River) also keyed to E. carolleeae . Morphological analysis of archival specimens from 1962 and from all the Great Lakes was identified as E. carolleeae . Additionally, Eurytemora drawings in previous publications were reassessed to determine if the species was E. carolleeae and are reported here. Additional morphological characters that may distinguish North American E. carolleeae from other taxa are also described. We conclude that E. carolleeae is the correct name for the species of Eurytemora that has inhabited the Great Lakes since its invasion, as established by both morphological and COI sequence comparisons to reference keys and sequence databases in present and archival specimens.

Great Lakes↗