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Results for “Journal of Morphology”

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At least 73 records · Page 4Linked to original sources

Influence of shell morphology on distributions of unionids in the upper Mississippi River

Attempts to predict the distribution of unionids from readily measurable microhabitat descriptors (i.e. water depth, current velocity, stream size, sediment type) have been largely unsuccessful, but certain biological and calculated hydraulic variables have recently shown some predictive power. We used historic and recent data on unionids (from 1987 to 2003) and hydraulic conditions at 438 sample locations over a 38-km reach of the Upper Mississippi River (Navigation Pool 8) to compare the distribution of unionids with different shell morphologies. We evaluated whether sculptured, thick-shelled (STK) species would be found in areas with higher velocity and shear stress, compared to nonsculptured, thin-shelled (NSTN) species. We used classification trees to model the presence and absence of STK and NSTN species to determine which variables were most likely to predict their distribution. Candidate predictor variables included sampling gear, field substrate, water depth (bathymetry), slope, velocity, shear stress and Froude number under low, moderate and high discharges. Our models predicted that STK mussels would occupy a larger portion of the total aquatic area in this reach of the river than NSTN mussels. However, our data demonstrated that NSTN species used areas of higher shear stress and velocity than STK species, but were also present in backwaters with low energy, thus rejecting our hypothesis. The presence of NSTN species over a wide range of shear stress and velocity was probably due to the wide array of life histories displayed within this guild. Overall, these results are consistent with the flow refuge concept in which unionids are more prevalent in areas with low to moderate hydraulic stresses, regardless of shell morphology, and demonstrate the importance of incorporating abiotic and biotic variables into predictive models.

Journal of Molluscan Studies↗

Processes that initiate turbidity currents and their influence on turbidites: A marine geology perspective

How the processes that initiate turbidity currents influence turbidite deposition is poorly understood, and many discussions in the literature rely on concepts that are overly simplistic. Marine geological studies provide information on the initiation and flow path of turbidity currents, including their response to gradient. In case studies of late Quaternary turbidites on the eastern Canadian and western U.S. margins, initiation processes are inferred either from real-time data for historical flows or indirectly from the age and contemporary paleogeography, erosional features, and depositional record. Three major types of initiation process are recognized: transformation of failed sediment, hyperpycnal flow from rivers or ice margins, and resuspension of sediment near the shelf edge by oceanographic processes. Many high-concentration flows result from hyperpycnal supply of hyperconcentrated bedload, or liquefaction failure of coarse-grained sediment, and most tend to deposit in slope conduits and on gradients < 0.5° at the base of slope and on the mid fan. Highly turbulent flows, from transformation of retrogressive failures and from ignitive flows that are triggered by oceanographic processes, tend to cannibalize these more proximal sediments and redeposit them on lower gradients on the basin plain. Such conduit flushing provides most of the sediment in large turbidites. Initiation mechanism exerts a strong control on the duration of turbidity flows. In most basins, there is a complex feedback between different types of turbidity-current initiation, the transformation of the flows, and the associated slope morphology. As a result, there is no simple relationship between initiating process and type of deposit.

Journal of Sedimentary Research↗

Quantifying large-scale surface change using SAR amplitude images: Crater morphology changes during the 2019-2020 Shishaldin Volcano eruption

Morphological processes often induce meter-scale elevation changes. When a volcano erupts, tracking such processes provides insights into the style and evolution of eruptive activity and related hazards. Compared to optical remote-sensing products, synthetic aperture radar (SAR) observes surface change during inclement weather and at night. Differential SAR interferometry estimates phase change between SAR acquisitions and is commonly applied to quantify deformation. However, large deformation or other coherence loss can limit its use. We develop a new approach applicable when repeated digital elevation models (DEMs) cannot be otherwise retrieved. Assuming an isotropic radar cross-section, we estimate meter-scale vertical morphological change directly from SAR amplitude images via an optimization method that utilizes a high-quality DEM. We verify our implementation through simulation of a collapse feature that we modulate onto topography. We simulate radar effects and recover the simulated collapse. To validate our method, we estimate elevation changes from TerraSAR-X stripmap images for the 2011–2012 eruption of Mount Cleveland. Our results reproduce those from two previous studies; one that used the same dataset, and another based on thermal satellite data. By applying this method to the 2019–2020 eruption of Shishaldin Volcano, Alaska, we generate elevation change time series from dozens of co-registered TerraSAR-X high-resolution spotlight images. Our results quantify previously unresolved cone growth in November 2019, collapses associated with explosions in December–January, and further changes in crater elevations into spring 2020. This method can be used to track meter-scale morphology changes for ongoing eruptions with low latency as SAR imagery becomes available.

Alaska↗

Palynological composition of a Lower Cretaceous South American tropical sequence: Climatic implications and diversity comparisons with other latitudes.

Premise of the study : Reconstruction of floristic patterns during the early diversification of angiosperms is impeded by the scarce fossil record, especially in tropical latitudes. Here we collected quantitative palynological data from a stratigraphic sequence in tropical South America to provide floristic and climatic insights into such tropical environments during the Early Cretaceous. Methods : We reconstructed the floristic composition of an Aptian-Albian tropical sequence from central Colombia using quantitative palynology (rarefied species richness and abundance) and used it to infer its predominant climatic conditions. Additionally, we compared our results with available quantitative data from three other sequences encompassing 70 floristic assemblages to determine latitudinal diversity patterns. Key results : Abundance of humidity indicators was higher than that of aridity indicators (61% vs. 10%). Additionally, we found an angiosperm latitudinal diversity gradient (LDG) for the Aptian, but not for the Albian, and an inverted LDG of the overall diversity for the Albian. Angiosperm species turnover during the Albian, however, was higher in humid tropics. Conclusions : There were humid climates in northwestern South America during the Aptian-Albian interval contrary to the widespread aridity expected for the tropical belt. The Albian inverted overall LDG is produced by a faster increase in per-sample angiosperm and pteridophyte diversity in temperate latitudes. However, humid tropical sequences had higher rates of floristic turnover suggesting a higher degree of morphological variation than in temperate regions.

American Journal of Botany↗

Characteristics for the external identification of Black Carp from Grass Carp

Black Carp Mylopharyngodon piceus and Grass Carp Ctenopharyngodon idella are morphologically similar species native to eastern Asia and imported to North America as biological control organisms. Preferred identification methods are coloration and pharyngeal tooth form. Grass Carp possess serrated teeth and Black Carp molariform teeth. Examination of pharyngeal teeth causes extensive damage to a specimen and is labor and time intensive. Coloration can vary within a species and fades with preservation. We present a suite of external characteristics consisting of a truss network canonical variate analysis of distance measurements among landmarks on the lateral view of the head of each fish, the ratio of head length to mouth width, the visible presence of the premaxilla viewed dorsally with the mouth fully closed, and anterior lateral line angles among scales. Canonical variate analysis suggested that Grass Carp have a deeper head at the preoperculum and Black Carp a more elongate head relative to the preoperculum and eye. Comparisons of head length to mouth width ratio, visibility of the premaxilla dorsally with the mouth fully closed, and anterior lateral line angles all served as external characteristics of species, but outliers were present for each method. Because of the plastic morphology of wild populations, we suggest that a combination of characters be applied for identification.

Journal of Fish and Wildlife Management↗

Morphological evolution in the San Francisco Bight

San Francisco Bight, located near the coast of San Francisco, USA, is an extremely dynamic tidal inlet environmental subject to large waves and strong currents. Wave heights coming from the Pacific Ocean commonly exceed 5 m during winter storms. During peak flow tidal currents approach 3 m/s at the Golden Gate, a 1 km wide entrance that connects San Francisco Bay to the Pacific Ocean. Flow structure in this region varies markedly spatially and temporally due to the complex interaction by wind, waves and tidal currents. A multibeam sonar survey was recently completed that mapped in high resolution, for the first time, the bottom morphology in the region of the ebb tidal delta. This data set includes a giant sand wave field covering an area of approximately 4 square kilometers. The new survey enables the calculation of seabed change that has occurred in the past 50 years, since the last comprehensive survey of the area was completed. This comparison indicates an average erosion of 60 centimeters which equates to a total volume change of approximately 9.3 x 10 7 m 3 . Morphologic change also indicates that flood channels have filled and that the entire ebb delta is contracting radially.

California↗

Use of electricity to sedate Lake Trout for intracoelomic implantation of electronic transmitters

Use of telemetry data to inform fisheries conservation and management is becoming increasingly common; as such, fish typically must be sedated before surgical implantation of transmitters into the coelom. Given that no widely available, immediate-release chemical sedative currently exists in North America, we investigated the feasibility of using electricity to sedate Lake Trout Salvelinus namaycush long enough for an experienced surgeon to implant an electronic transmitter (i.e., 180 s). Specifically, our study objectives were to determine (1) whether some combination of electrical waveform characteristics (i.e., duty cycle, frequency, voltage, and pulse type) could sedate Lake Trout for at least 180 s; and (2) whether Lake Trout that were sequentially exposed to continuous DC and pulsed DC had greater rates of spinal injury and short-term mortality than control fish. A Portable Electrosedation System unit was used to sedate hatchery and wild Lake Trout. Dual-frequency pulsed-DC and two-stage approaches successfully sedated Lake Trout and had similar induction and recovery times. Lake Trout sedated using the two-stage approach did not have survival rates or spinal abnormalities that were significantly different from those of control fish. We concluded that electricity was a viable alternative to chemical sedatives for sedating Lake Trout before surgical implantation of an electronic transmitter, but we suggest that Lake Trout and other closely related species (e.g., Arctic Char Salvelinus alpinus ) may require morphotype-specific electrical waveforms due to their morphological diversity.

North American Journal of Fisheries Management↗

Practical use of video imagery in nearshore oceanographic field studies

An approach was developed for using video imagery to quantify, in terms of both spatial and temporal dimensions, a number of naturally occurring (nearshore) physical processes. The complete method is presented, including the derivation of the geometrical relationships relating image and ground coordinates, principles to be considered when working with video imagery and the two-step strategy for calibration of the camera model. The techniques are founded on the principles of photogrammetry, account for difficulties inherent in the use of video signals, and have been adapted to allow for flexibility of use in field studies. Examples from field experiments indicate that this approach is both accurate and applicable under the conditions typically experienced when sampling in coastal regions. Several applications of the camera model are discussed, including the measurement of nearshore fluid processes, sand bar length scales, foreshore topography, and drifter motions. Although we have applied this method to the measurement of nearshore processes and morphologic features, these same techniques are transferable to studies in other geophysical settings.

IEEE Journal of Oceanic Engineering↗

Body morphology differs in wild juvenile Chinook salmon Oncorhynchus tshawytscha in the Willamette River, Oregon, USA

Body morphology of juvenile Chinook salmon Oncorhynchus tshawytscha in the upper Willamette River, Oregon, U.S.A., was analysed to determine if variation in body shape is correlated with migratory life-history tactics followed by juveniles. Body shape was compared between migrating juveniles that expressed different life-history tactics, i.e . autumn migrants and yearling smolts, and among parr sampled at three sites along a longitudinal river gradient. In the upper Willamette River, the expression of life-history tactics is associated with where juveniles rear in the basin with fish rearing in downstream locations generally completing ocean ward migrations earlier in life than fish rearing in upstream locations. The morphological differences that were apparent between autumn migrants and yearling smolts were similar to differences between parr rearing in downstream and upstream reaches, indicating that body morphology is correlated with life-history tactics. Autumn migrants and parr from downstream sampling sites had deeper bodies, shorter heads and deeper caudal peduncles compared with yearling smolts and parr from the upstream sampling site. This study did not distinguish between genetic and environmental effects on morphology; however, the results suggest that downstream movement of juveniles soon after emergence is associated with differentiation in morphology and with the expression of life-history variation.

Oregon↗

Genetic methods improve accuracy of gender determination in beaver

Gender identification of sexually monomorphic mammals can be difficult. We used analysis of zinc-finger protein (Zfx and Zfy) DNA regions to determine gender of 96 beavers ( Castor canadensis ) from 3 areas and used these results to verify gender determined in the field. Gender was correctly determined for 86 (89.6%) beavers. Incorrect assignments were not attributed to errors in any one age or sex class. Although methods that can be used in the field (such as morphological methods) can provide reasonably accurate gender assignments in beavers, the genetic method might be preferred in certain situations.

Journal of Mammalogy↗

Morphological plasticity following species-specific recognition and competition in two perennial grasses

Morphological characteristics and biomass allocation of two perennial grasses, Pseudoroegneria spicata (Pursh) A. Löve ssp. spicata (bluebunch wheatgrass) and Agropyron desertorum (Fisch. ex Link) Schult. (crested wheatgrass), were compared under different competition and nutrient treatments. The competitive responses of two plants grown in containers under field conditions were assessed in monocultures and mixtures in two experiments using different scales of nutrient application. In the Small-Scale Experiment, a localized fertilization was applied in the rooting zone between two plants; in the Large-Scale Experiment the entire container was supplied with nutrients. Agropyron responded more vigorously to fertilization than did Pseudoroegneria , but based on the relative performance of Agropyron in monoculture and mixture, it was not superior to Pseudoroegneria in resource competition. Pseudoroegneria was apparently able to recognize neighboring plants as either conspecifics or individuals of the other species. The responses included changes in shoot architecture, root morphology, and allocation between roots and shoots. Agropyron generally did not exhibit such morphological flexibility. In field plot plantings of 4-yr-old tussocks similar shoot differences were seen in Pseudoroegneria. There was, however, no indication of superior resource competition for Agropyron. Thus, any early advantage of Agropyron in vigorous growth of young plants in response to nutrients was apparently lost by the time the plants had reached this stage of development. Morphological and allocation flexibility of Pseudoroegneria may have compensated for slower, less vigorous growth. If species-specific recognition and morphological plasticity are common in nature, this complicates our attempts to understand mechanisms of competition.

American Journal of Botany↗

Perception of neighboring plants by rhizomes and roots: Morphological manifestations of a clonal plant

A previous study showed that clonal morphology of the rhizomatous grass Elymus lanceolatus ssp. lanceolatus (Scibner & J.G. Smith Gould) was influenced more by neighbouring root systems than by the local distribution of nutrients. In this study we determine whether individual rhizomes or roots of E . lanceolatus perceive neighbouring root systems and how this is manifested in morphological responses of E . lanceolatus clones. Elymus lanceolatus was grown in the same bin with Pseudoroegneria spicata (Pursh) A. Love or Agropyron desertorum (Fisch. ex Link) Schult. plants. Elymus lanceolatus was separated from its neighbours by different barriers. The barriers allowed either only E . lanceolatus roots; only a single E . lanceolatus primary rhizome; or both roots and rhizomes to contact the neighbour root system. When only a single E . lanceolatus primary rhizome with potentially developing branching rhizomes made contact with the neighbour, the clonal structure of E . lanceolatus was modified more with P . spicata as the neighbour than with A . desertorum . With root contact of E . lanceolatus alone there was a similar effect with the neighbouring plants, but there was a more marked inhibitory effect on E . lanceolatus clonal growth with P . spicata than with A . desertorum , compared with the treatment with only a single rhizome in contact with the neighbour. Root resource competition in the unconstrained treatment (roots and rhizomes) between neighbouring plant and E . lanceolatus was more apparent with A . desertorum than with P . spicata . This study is one of the first to document that rhizome and root contact of a clonal plant with its neighbours may induce different clonal responses depending on the species of neighbour. Key words : Agropyron desertorum , clonal morphology, Elymus lanceolatus ssp. lanceolatus , plant interference, plant contact, Pseudoroegneria spicata , rhizome structure, root systems.

Canadian Journal of Botany↗

Declines and shifts in morphological diversity of ciscoes (Coregonus spp.) in lakes Huron and Michigan, 1917–2019

Ciscoes ( Coregonus spp . ) were historically abundant and ecologically important in Laurentian Great Lakes ecosystems. Despite well-documented declines in their abundance and taxonomic diversity, declines in morphological diversity remain understudied. This knowledge gap is especially pertinent for lakes Michigan and Huron, which have each lost six of eight historical species. Improved understanding of historical and contemporary morphological diversity of Great Lakes ciscoes can inform ongoing restoration efforts and further elucidate the factors that contributed to declines. Our goal was to characterize shifts in morphological diversity of ciscoes in lakes Michigan and Huron over a century (1917–2019). We analyzed size-corrected morphometric and meristic measurements from three periods: Early (1917–1923), Middle (1950–1972), and Contemporary (2015–2019). We then identified morphologically distinct clusters while remaining agnostic to species identifications. We found that morphological diversity and the number of distinct clusters declined over time. We then leveraged species identifications to highlight key species losses and examine morphological shifts among extant species. Our findings provide insights into the historical and contemporary morphological diversity of ciscoes and will inform restoration efforts.

Lake Huron, Lake Michigan↗

Sensitivity of storm response to antecedent topography in the XBeach model

Antecedent topography is an important aspect of coastal morphology when studying and forecasting coastal change hazards. The uncertainty in morphologic response of storm-impact models and their use in short-term hazard forecasting and decadal forecasting is important to account for when considering a coupled model framework. This study provided a methodology to investigate uncertainty of profile response within the storm impact model XBeach related to varying antecedent topographies. A parameterized island Gaussian fit (PIGF) model generated an idealized baseline profile and a suite of idealized profiles that vary specific characteristics based on collated observed LiDAR data from Dauphin Island, AL, USA. Six synthetic storm scenarios were simulated on each of the idealized profiles with XBeach in both 1- and 2-dimensional setups and analyzed to determine the morphological response and uncertainty related to the varied antecedent topographies. Profile morphologic response tends to scale with storm magnitude but among the varied profiles there is greater uncertainty in profile response to the medium range storm scenarios than to the low and high magnitude storm scenarios. XBeach can be highly sensitive to morphologic thresholds, both antecedent and time-varying, especially with regards to beach slope.

Alabama↗

Bathymetry and absorptivity of Titan's Ontario Lacus

Ontario Lacus is the largest and best characterized lake in Titan's south polar region. In June and July 2009, the Cassini RADAR acquired its first Synthetic Aperture Radar (SAR) images of the area. Together with closest approach altimetry acquired in December 2008, these observations provide a unique opportunity to study the lake's nearshore bathymetry and complex refractive properties. Average radar backscatter is observed to decrease exponentially with distance from the local shoreline. This behavior is consistent with attenuation through a deepening layer of liquid and, if local topography is known, can be used to derive absorptive dielectric properties. Accordingly, we estimate nearshore topography from a radar altimetry profile that intersects the shoreline on the East and West sides of the lake. We then analyze SAR backscatter in these regions to determine the imaginary component of the liquid's complex index of refraction (κ). The derived value, κ = (6.1 −1.3 +1.7 ) × 10 −4 , corresponds to a loss tangent of tan Δ = (9.2 −2.0 +2.5 ) × 10 −4 and is consistent with a composition dominated by liquid hydrocarbons. This value can be used to test compositional models once the microwave optical properties of candidate materials have been measured. In areas that do not intersect altimetry profiles, relative slopes can be calculated assuming the index of refraction is constant throughout the liquid. Accordingly, we construct a coarse bathymetry map for the nearshore region by measuring bathymetric slopes for eleven additional areas around the lake. These slopes vary by a factor of ∼5 and correlate well with observed shoreline morphologies.

Journal of Geophysical Research E: Planets↗

Giant American brook lampreys, Lampetra lamottei , in the upper Great Lakes

Five female American brook lampreys, Lampetra lamottei , collected in lakes Michigan and Huron averaged nearly twice as long and about six times as heavy as American brook lampreys of normal size. Three factors suggested that the giant lampreys may have fed parasitically after metamorphosis: morphological adaptations of the species for parasitic life, their large size, and absence of extremely large ammocetes among a million sampled.

Journal of the Fisheries Research Board of Canada↗

Temperature, pressure, and compositional effects on anomalous or "self" preservation of gas hydrates

We previously reported on a thermal regime where pure, polycrystalline methane hydrate is preserved metastably in bulk at up to 75 K above its nominal temperature stability limit of 193 K at 0.1 MPa, following rapid release of the sample pore pressure. Large fractions (>50 vol.%) of methane hydrate can be preserved for 2-3 weeks by this method, reflecting the greatly suppressed rates of dissociation that characterize this "anomalous preservation" regime. This behavior contrasts that exhibited by methane hydrate at both colder (193-240 K) and warmer (272-290 K) isothermal test conditions, where dissociation rates increase monotonically with increasing temperature. Here, we report on recent experiments that further investigate the effects of temperature, pressure, and composition on anomalous preservation behavior. All tests conducted on sI methane hydrate yielded self-consistent results that confirm the highly temperature-sensitive but reproducible nature of anomalous preservation behavior. Temperature-stepping experiments conducted between 250 and 268 K corroborate the relative rates measured previously in isothermal preservation tests, and elevated pore-pressure tests showed that, as expected, dissociation rates are further reduced with increasing pressure. Surprisingly, sII methane-ethane hydrate was found to exhibit no comparable preservation effect when rapidly depressurized at 268 K, even though it is thermodynamically stable at higher temperatures and lower pressures than sI methane hydrate. These results, coupled with SEM imaging of quenched sample material from a variety of dissociation tests, strongly support our earlier arguments that ice-"shielding" effects provided by partial dissociation along hydrate grain surfaces do not serve as the primary mechanism for anomalous preservation. The underlying physical-chemistry mechanism(s) of anomalous preservation remains elusive, but appears to be based more on textural or morphological changes within the hydrate material itself, rather than on compositional zoning or ice-rind development.

Canadian Journal of Physics↗

A reexamination of the Pennsylvanian trace fossil Olivellites

The original interpretation of Olivellites plummeri Fenton and Fenton as the trace of an infaunal gastropod, is reconsidered and rejected. The original slab bearing several examples of O. plummeri has been reexamined and reillustrated. The slab came from the type-locality of O. plummeri in Eastland County, Tex., and is a shallow sub tidal sandstone of the Graham Formation; the sandstone, which has yielded additional specimens, is presumably a reworked delta-front deposit. Olivellites was also observed in the Caddo Creek Formation in Stephens County, Tex., but, to date, it has not been found elsewhere in north-central Texas. Interpretation of Paleozoic ichnofossils by analogy with modern traces is limited; behavioral characteristics may be the products of post-Paleozoic innovation. The internal morphology and path of Olivellites are unlike those of any modern gastropod trail, and the genus is removed from the Mollusca.

Texas↗