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Results for “Journal of Marine Systems”

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At least 73 records · Page 4Linked to original sources
USGS1973

Dolomitization model for Upper Cambrian and Lower Ordovician carbonate rocks in the eastern United States

Existing models for dolomitization emphasize that penecontemporaneous dolomitization can occur in both subtidal and supratidal environments if the necessary chemical and physical factors favorable for the development of magnesium-rich hypersaline waters exist. Holocene shallow-water hypersaline environments that have the potential to produce dolomite without deposition of more soluble evaporite minerals are found in Shark Bay, Australia, and on the Great Bahama Bank. These hypersalinity systems are characterized by near-vertical isosalinity layers of increasing concentration landward from the open ocean and show little or no relationship to bottom topography. I suggest that a similar but larger scale epicontinentalsalinity system covering the Late Cambrian and Early Ordovician carbonate continental shelf produced a broad wedge of subtidally deposited dolomite in the eastern half of the United States from Mexico to Canada. The distribution of limestone and dolomite in this region is closely keyed to the salinity gradient and accounts for the natural progression from a normal marine limestone facies through a transition zone to a highly saline dolomite facies phase. Algal stromatolite mats and domes occupied low-energy niches in both the limestone and dolomite facies, whereas stratiform algal stromatolites were confined to the areas of moderate energy within the dolomite facies.

Journal of Research of the U.S. Geological Survey↗
USGS2021

Fatty acid profiles of feeding and fasting bears: Estimating calibration coefficients, the timeframe of diet estimates, and selective mobilization during hibernation

Accurate information on diet composition is central to understanding and conserving carnivore populations. Quantitative fatty acid signature analysis (QFASA) has emerged as a powerful tool for estimating the diets of predators, but ambiguities remain about the timeframe of QFASA estimates and the need to account for species-specific patterns of metabolism. We conducted a series of feeding experiments with four juvenile male brown bears ( Ursus arctos ) to (1) track the timing of changes in adipose tissue composition and QFASA diet estimates in response to a change in diet and (2) quantify the relationship between consumer and diet FA composition (i.e., determine “calibration coefficients”). Bears were fed three compositionally distinct diets for 90–120 days each. Two marine-based diets were intended to approximate the lipid content and composition of the wild diet of polar bears ( U. maritimus ). Bear adipose tissue composition changed quickly in the direction of the diet and showed evidence of stabilization after 60 days. During hibernation, FA profiles were initially stable but diet estimates after 10 weeks were sensitive to calibration coefficients. Calibration coefficients derived from the marine-based diets were broadly similar to each other and to published values from marine-fed mink ( Mustela vison ), which have been used as a model for free-ranging polar bears. For growing bears on a high-fat diet, the temporal window for QFASA estimates was 30–90 days. Although our results reinforce the importance of accurate calibration, the similarities across taxa and diets suggest it may be feasible to develop a generalized QFASA approach for mammalian carnivores.

Journal of Comparative Physiology B: Biochemical, ↗
USGS2010

Building the IOOS data management subsystem

We discuss progress to date and plans for the Integrated Ocean Observing System (IOOS??) Data Management and Communications (DMAC) subsystem. We begin by presenting a conceptual architecture of IOOS DMAC. We describe work done as part of a 3-year pilot project known as the Data Integration Framework and the subsequent assessment of lessons learned. We present work that has been accomplished as part of the initial version of the IOOS Data Catalog. Finally, we discuss near-term plans for augmenting IOOS DMAC capabilities.

Marine Technology Society Journal↗
USGS2022

Spatial effects in relation to reproductive performance of Common Murres (Uria aalge) at a re-established colony

A main goal of seabird colony restoration is for the colony to become self-sustaining. To do so, elevated rates must be attained in (1) reproductive success and (2) recruitment by immigrants and birds produced at the colony. Thus, an understanding of the factors affecting reproductive success and recruitment at restoration sites is vital. We examined how spatial features at the colony level affected reproductive success of Common Murres Uria aalge (hereafter, murres) over a six-year period at Devil's Slide Rock, California, a colony re-established using social attraction techniques. Clusters of sites with similar egg-laying dates, as well as high hatching and breeding success, occurred in the densest portion of the colony, which was also the last area occupied by murres at the time of extirpation and the first area to be re-colonized. Clusters of sites with low success occurred in outlying, low-density portions of the colony. Breeding success, influenced largely by high fledging success, averaged > 60% most years. Reproductive success was greatest at breeding sites with earlier egg-laying dates, those in closest proximity to the breeding sites of other murres and the Brandt's Cormorant Urile penicillatus , and those outside Brown Pelican Pelecanus occidentalis disturbance zones. Based on our findings, for future murre restoration projects in the California Current System, we suggest (1) placing social attraction equipment in the area(s) last utilized by murres prior to extirpation, (2) attempting to establish two dense breeding groups, (3) targeting sites already utilized regularly by nesting Brandt's Cormorants, and (4) avoiding sites or habitats prone to disturbance by larger and aggressive species such as Brown Pelicans, Bald Eagles Haliaeetus leucocephalus , or Common Ravens Corvus corax .

California↗
USGS2013

Great Lakes rivermouth ecosystems: scientific synthesis and management implications

At the interface of the Great Lakes and their tributary rivers lies the rivermouths, a class of aquatic ecosystem where lake and lotic processes mix and distinct features emerge. Many rivermouths are the focal point of both human interaction with the Great Lakes and human impacts to the lakes; many cities, ports, and beaches are located in rivermouth ecosystems, and these human pressures often degrade key ecological functions that rivermouths provide. Despite their ecological uniqueness and apparent economic importance, there has been relatively little research on these ecosystems as a class relative to studies on upstream rivers or the open-lake waters. Here we present a synthesis of current knowledge about ecosystem structure and function in Great Lakes rivermouths based on studies in both Laurentian rivermouths, coastal wetlands, and marine estuarine systems. A conceptual model is presented that establishes a common semantic framework for discussing the characteristic spatial features of rivermouths. This model then is used to conceptually link ecosystem structure and function to ecological services provided by rivermouths. This synthesis helps identify the critical gaps in understanding rivermouth ecology. Specifically, additional information is needed on how rivermouths collectively influence the Great Lakes ecosystem, how human alterations influence rivermouth functions, and how ecosystem services provided by rivermouths can be managed to benefit the surrounding socioeconomic networks.

Great Lakes↗
USGS1979

Exploitation of marine mammals: r-selection of K-strategists?

The importance of marine mammals as predators to the organization of marine communities is poorly known, although in several structurally analogous systems the ecological and evolutionary roles of predators are known to be of considerable importance. Occupation of the marine environment by mammals probably carried physiological constraints for single-young pregnancies thereby limiting all species to low intrinsic rates of population increase. As such, species subjected to high mortality rates from predation or other natural disturbances became extinct; those that survived probably were largely resource limited. In view of this scenario it is suggested that stable populations of marine mammals can be maintained at high levels without being manipulated in most communities. Exploitation probably constitutes a rather dramatic environmental change to marine mammals consequently subjecting them to selective forces fundamentally different from many of those under the influence of which they evolved.

Journal of the Fisheries Research Board of Canada↗
USGS1998

Does the Sverdrup critical depth model explain bloom dynamics in estuaries?

In this paper we use numerical models of coupled biological-hydrodynamic processes to search for general principles of bloom regulation in estuarine waters. We address three questions: what are the dynamics of stratification in coastal systems as influenced by variable freshwater input and tidal stirring? How does phytoplankton growth respond to these dynamics? Can the classical Sverdrup Critical Depth Model (SCDM) be used to predict the timing of bloom events in shallow coastal domains such as estuaries? We present results of simulation experiments which assume that vertical transport and net phytoplankton growth rates are horizontally homogeneous. In the present approach the temporally and spatially varying turbulent diffusivities for various stratification scenarios are calculated using a hydrodynamic code that includes the Mellor-Yamada 2.5 turbulence closure model. These diffusivities are then used in a time- and depth-dependent advection-diffusion equation, incorporating sources and sinks, for the phytoplankton biomass. Our modeling results show that, whereas persistent stratification greatly increases the probability of a bloom, semidiurnal periodic stratification does not increase the likelihood of a phytoplankton bloom over that of a constantly unstratified water column. Thus, for phytoplankton blooms, the physical regime of periodic stratification is closer to complete mixing than to persistent stratification. Furthermore, the details of persistent stratification are important: surface layer depth, thickness of the pycnocline, vertical density difference, and tidal current speed all weigh heavily in producing conditions which promote the onset of phytoplankton blooms. Our model results for shallow tidal systems do not conform to the classical concepts of stratification and blooms in deep pelagic systems. First, earlier studies (Riley, 1942, for example) suggest a monotonic increase in surface layer production as the surface layer shallows. Our model results suggest, however, a nonmonotonic relationship between phytoplankton population growth and surface layer depth, which results from a balance between several 'competing' processes, including the interaction of sinking with turbulent mixing and average net growth occurring within the surface layer. Second, we show that the traditional SCDM must be refined for application to energetic shallow systems or for systems in which surface layer mixing is not strong enough to counteract the sinking loss of phytoplankton. This need for refinement arises because of the leakage of phytoplankton from the surface layer by turbulent diffusion and sinking, processes not considered in the classical SCDM. Our model shows that, even for low sinking rates and small turbulent diffusivities, a significant % of the phytoplankton biomass produced in the surface layer can be lost by these processes.

Journal of Marine Research↗
USGS2009

Snow and ice in a changing hydrological world

On the occasion of the 60th anniversary of the International Association of Hydrological Sciences, the 100th and 50th anniversaries of the First and Second International Polar Years, and the 25th anniversary of the International Geophysical Year, it seems appropriate to re-examine the world's water balance and the role of snow and ice in the global hydrological climatic system. Snow cover on land (especially in the Northern Hemisphere) and sea ice (especially in the Southern Hemisphere) vary seasonally, and this seasonal change has an important effect on the world climate because snow and sea ice reflect solar radiation efficiently and affect other heat flow processes between atmosphere and land or ocean. Glaciers, including ice sheets, store most of the fresh water on Earth, but change dimensions relatively slowly. There is no clear evidence that the glacier ice volume currently is declining, but more needs to be known about mountain glacier and ice sheet mass balances. The current rise in sea level poses an enigma: thermal expansion of the oceans may account for half of the present rise, but the other half is unexplained. Although major changes in the large ice sheets take place over time scales of 10 4 to 10 5 years, marine ice sheets may be subject to rapid disintegration due to grounding line instability, perhaps accompanied by surging. Ice cores may produce remarkably complete histories of air temperature, precipitation, fallout, and atmospheric composition. A recent core through the Greenland Ice Sheet shows an abrupt transition from glacial to modern climate just over 10000 years ago, suggesting that climate is an “almost intransitive” system. Because of the possibility of abrupt climate transitions and the uncertain stability of the West Antarctic Ice Sheet, future climatic variations are difficult to predict. The calculated heating of the atmosphere in the polar regions due to CO 2 increase is, therefore, of special interest.

Hydrological Sciences Journal↗
USGS2022

Bedrock geochemistry and alteration history of the clay-bearing Glen Torridon region of Gale crater, Mars

Glen Torridon is a topographic trough located on the slope of Aeolis Mons, Gale crater, Mars. It corresponds to what was previously referred to as the “clay-bearing unit”, due to the relatively strong spectral signatures of clay minerals (mainly ferric smectites) detected from orbit. Starting in January 2019, the Curiosity rover explored Glen Torridon for more than 700 sols (Martian days). The objectives of this campaign included acquiring a detailed understanding of the geologic context in which the clay minerals were formed and determining the intensity of aqueous alteration experienced by the sediments. Here, we present the major-element geochemistry of the bedrock as analyzed by the ChemCam instrument. Our results reveal that the two main types of bedrock exposures identified in the lower part of Glen Torridon are associated with distinct chemical compositions (K-rich and Mg-rich), for which we are able to propose mineralogical interpretations. Moreover, the topmost stratigraphic member exposed in the region displays a stronger diagenetic overprint, especially at two locations close to the unconformable contact with the overlying Stimson formation, where the bedrock composition significantly deviates from the rest of Glen Torridon. Overall, the values of the Chemical Index of Alteration determined with ChemCam are elevated by Martian standards, suggesting the formation of clay minerals through open system weathering. However, there is no indication that the alteration was stronger than in some terrains previously visited by Curiosity , which in turn implies that the enhanced orbital signatures are mostly controlled by non-compositional factors.

Journal of Geophysical Research E: Planets↗
USGS2019

Size-specific apparent survival rate estimates of white sharks using mark-recapture models

For species that exist at low abundance or are otherwise difficult to study, it is challenging to estimate vital rates such as survival and fecundity and common to assume that survival rates are constant across ages and sexes. Population assessments based on overly simplistic vital rates can lead to erroneous conclusions. We estimated sex and length-based annual apparent survival rates for white sharks (Carcharodon carcharias). We found evidence that annual apparent survival differed over ontogeny in a system with competitive foraging aggregations, from 0.63 (SE = 0.08) for newly recruiting sub-adults to 0.95 (SE = 0.02) for the largest sharks. Our results reveal a potential challenge to ontogenetic recruitment in a long-lived, highly mobile top marine predator, as survival rates for sub-adult white sharks may be lower than previously assumed. Alternatively, younger and competitively inferior individuals may be forced to permanently emigrate from primary foraging sites. This study provides new methodology for estimating apparent survival as a function of diverse covariates by capture-recapture study including when sex assignment is uncertain.

California↗
USGS1999

The evolutionary history of steelhead ( Oncorhynchus mykiss ) along the US Pacific Coast: Developing a conservation strategy using genetic diversity

Changes in genetic variation across a species range may indicate patterns of population structure resulting from past ecological and demographic events that are otherwise difficult to infer and thus provide insight into evolutionary development. Genetic data is used, drawn from 11 microsatellite loci amplified from anadromous steelhead ( Oncorhynchus mykiss ) sampled throughout its range in the eastern Pacific Ocean, to explore population structure at the southern edge in California. Steelhead populations in this region represent less than 10% of their reported historic abundance and survive in very small populations found in fragmented habitats. Genetic data derived from three independent molecular systems (allozymes, mtDNA, and microsatellites) have shown that the southernmost populations are characterized by a relatively high genetic diversity. Two hypothetical models supporting genetic population substructure such as observed were considered: (1) range expansion with founder-flush effects and subsequent population decline; (2) a second Pleistocene radiation from the Gulf of California. Using genetic and climatic data, a second Pleistocene refugium contributing to a southern ecotone seems more feasible. These data support strong conservation measures based on genetic diversity be developed to ensure the survival of this uniquely diverse gene pool.

ICES Journal of Marine Science↗
USGS2014

Where the waters meet: sharing ideas and experiences between inland and marine realms to promote sustainable fisheries management

Although inland and marine environments, their fisheries, fishery managers, and the realm-specific management approaches are often different, there are a surprising number of similarities that frequently go unrecognized. We contend that there is much to be gained by greater cross-fertilization and exchange of ideas and strategies between realms and the people who manage them. The purpose of this paper is to provide examples of the potential or demonstrated benefits of working across aquatic boundaries for enhanced sustainable management of the world’s fisheries resources. Examples include the need to (1) engage in habitat management and protection as the foundation for fisheries, (2) rethink institutional arrangements and management for open-access fisheries systems, (3) establish “reference points” and harvest control rules, (4) engage in integrated management approaches, (5) reap conservation benefits from the link to fish as food, and (6) reframe conservation and management of fish to better engage the public and industry. Cross-fertilization and knowledge transfer between realms could be realized using environment-independent curricula and symposia, joint scientific advisory councils for management, integrated development projects, and cross-realm policy dialogue. Given the interdependence of marine and inland fisheries, promoting discussion between the realms has the potential to promote meaningful advances in managing global fisheries.

Canadian Journal of Fisheries and Aquatic Sciences↗
USGS2025

The transition from resistance to acceptance: Managing a marine invasive species in a changing world

Marine invasive species can transform coastal ecosystems, yet mitigating their effects can be difficult, and even impractical. Often, marine invasive species are managed at poorly matched spatial scales, and at the same time, rates of spread and establishment are increasing under climate change and can outpace resources available for population suppression. These circumstances challenge traditional conservation goals of maintaining a historic environmental state, especially for a species like the European green crab ( Carcinus maenas ), a formidable invader with few examples of successful long-term removal programs. A management paradigm where decision alternatives include resisting or accepting a new ecological trajectory may be needed. We apply mathematical concepts from decision theory to develop a quantitative framework for navigating management decisions in this new resist-accept paradigm. We develop a model of European green crab growth, removal and colonization, and we find optimal levels of removal effort that minimize both ecological change and removal cost. We establish a benchmark of colonization pressure at which green crab density becomes decoupled from a decision maker's actions, such that population control can no longer shape the invasion trajectory. For informing the decision boundary between resistance and acceptance, our results highlight that a decision maker's understanding of how removal cost scales with removal effort is more important than understanding the density-impact relationship. We show that assuming stationary system dynamics can result in sub-optimal levels of species removal effort, highlighting the importance of developing anticipatory management strategies by accounting for non-stationary dynamics. Policy implications . For marine invasive species that can disperse across long distances and recolonize rapidly after removal, the focus of conservation policy should shift away from understanding how to resist change to understanding when to stop resisting change. Navigating this decision problem involves trade-offs among competing objectives, highlighting the need for structured approaches to elicit objective weights that reflect the values of the decision maker. For natural resource managers facing possible ecosystem transformation, this decision framework can enable proactive and strategic decisions made under uncertainty in a changing world.

Journal of Applied Ecology↗
USGS2012

Tectonic relations of carbon dioxide discharges and earthquakes

CO 2 ‐rich springs occur worldwide along major zones of seismicity. They are mostly in young orogenic belts, but some are in areas of rifting continental platforms. Analyses of 13 C content indicate that much of the CO 2 is derived from the mantle and that other important sources are the metamorphism of marine carbonate‐bearing sedimentary rocks and the degradation of organic material. The presence of calc‐silicate minerals, such as pumpellyite in metagraywacke, is evidence of former conversion of carbonate‐bearing rocks into calc‐silicate minerals and release of CO 2 . The CO 2 pressure in fractured rocks of a fault zone reduces the effective normal stress and, if it is sufficiently great, allows the fault to slip. If the pressure were maintained at a sufficiently high level, the fault behavior might be characterized by frequent small earthquakes and aseismic creep such as occur along active segments of the San Andreas system. The presence of CO 2 ‐rich springs may indicate a potentially hazardous seismic region. Monitoring of CO 2 discharges could be useful in earthquake prediction.

Journal of Geophysical Research B: Solid Earth↗
USGS2012

Patterns and controlling factors of species diversity in the Arctic Ocean

Aim The Arctic Ocean is one of the last near-pristine regions on Earth, and, although human activities are expected to impact on Arctic ecosystems, we know very little about baseline patterns of Arctic Ocean biodiversity. This paper aims to describe Arctic Ocean-wide patterns of benthic biodiversity and to explore factors related to the large-scale species diversity patterns. Location Arctic Ocean. Methods We used large ostracode and foraminiferal datasets to describe the biodiversity patterns and applied comprehensive ecological modelling to test the degree to which these patterns are potentially governed by environmental factors, such as temperature, productivity, seasonality, ice cover and others. To test environmental control of the observed diversity patterns, subsets of samples for which all environmental parameters were available were analysed with multiple regression and model averaging. Results Well-known negative latitudinal species diversity gradients (LSDGs) were found in metazoan Ostracoda, but the LSDGs were unimodal with an intermediate maximum with respect to latitude in protozoan foraminifera. Depth species diversity gradients were unimodal, with peaks in diversity shallower than those in other oceans. Our modelling results showed that several factors are significant predictors of diversity, but the significant predictors were different among shallow marine ostracodes, deep-sea ostracodes and deep-sea foraminifera. Main conclusions On the basis of these Arctic Ocean-wide comprehensive datasets, we document large-scale diversity patterns with respect to latitude and depth. Our modelling results suggest that the underlying mechanisms causing these species diversity patterns are unexpectedly complex. The environmental parameters of temperature, surface productivity, seasonality of productivity, salinity and ice cover can all play a role in shaping large-scale diversity patterns, but their relative importance may depend on the ecological preferences of taxa and the oceanographic context of regions. These results suggest that a multiplicity of variables appear to be related to community structure in this system.

Journal of Biogeography↗
USGS2023

Changes in abiotic drivers of green sea urchin demographics following the loss of a keystone predator

Sea urchin population demographics can respond to changes in keystone species abundances, with the magnitude of these responses varying depending on environmental influences. In this study, sea urchin populations were surveyed across 15 Aleutian archipelago islands over a 30-year period to understand how patterns of sea urchin demography (density, biomass, and size structure) varied through different ecological regimes that were caused by changes in the abundance of sea otters, a keystone species in this system. To examine long-term changes in sea urchin demographics, four time periods across the recent decline of sea otters were examined: during sea otter presence (1987-1994), nearing absence at the end of the decline (1997-2000), 10 years postdecline (2008-2010), and 15-20 years following the loss of sea otters from the ecosystem (2014-2017). Our results show that when sea otters were broadly present, sea urchin demographics were generally similar across the archipelago, with few urchins that had large-sized bodies. During this time, bottom-up environmental controls were muted relative to top-down forces from keystone predation. However, as sea otters declined and remained absent from the system, abiotic factors became more influential on sea urchin biomass, density, and size structure. In particular, differences among island groups during these periods were correlated with variation in ocean temperature, bathymetric complexity, and habitat availability. Sea urchin recruitment also varied among island groups, corresponding to ecoregions delineated by oceanic passes across the archipelago. The functional extinction of sea otters revealed an increasing influence of abiotic forcing in the absence of top-down control. This study further highlights the importance of understanding how keystone predators regulate herbivore demographics.

Alaska↗
USGS2018

Projected 21st century coastal flooding in the Southern California Bight. Part 1: Development of the third generation CoSMoS model

Due to the effects of climate change over the course of the next century, the combination of rising sea levels, severe storms, and coastal change will threaten the sustainability of coastal communities, development, and ecosystems as we know them today. To clearly identify coastal vulnerabilities and develop appropriate adaptation strategies due to projected increased levels of coastal flooding and erosion, coastal managers need local-scale hazards projections using the best available climate and coastal science. In collaboration with leading scientists world-wide, the USGS designed the Coastal Storm Modeling System (CoSMoS) to assess the coastal impacts of climate change for the California coast, including the combination of sea-level rise, storms, and coastal change. In this project, we directly address the needs of coastal resource managers in Southern California by integrating a vast range of global climate change projections in a thorough and comprehensive numerical modeling framework. In Part 1 of a two-part submission on CoSMoS, methods and the latest improvements are discussed, and an example of hazard projections is presented.

Journal of Marine Science and Engineering↗
USGS2022

Na+/HCO3- cotransporter 1 (nbce1) isoform gene expression during smoltification and seawater acclimation of Atlantic salmon

The life history of Atlantic salmon ( Salmo salar ) includes an initial freshwater phase (parr) that precedes a springtime migration to marine environments as smolts. The development of osmoregulatory systems that will ultimately support the survival of juveniles upon entry into marine habitats is a key aspect of smoltification. While the acquisition of seawater tolerance in all euryhaline species demands the concerted activity of specific ion pumps, transporters, and channels, the contributions of Na + /HCO 3 − cotransporter 1 (Nbce1) to salinity acclimation remain unresolved. Here, we investigated the branchial and intestinal expression of three Na + /HCO 3 − cotransporter 1 isoforms, denoted nbce1.1 , -1.2a , and -1.2b . Given the proposed role of Nbce1 in supporting the absorption of environmental Na + by ionocytes, we first hypothesized that expression of a branchial nbce1 transcript ( nbce1.2a ) would be attenuated in salmon undergoing smoltification and following seawater exposure. In two separate years, we observed spring increases in branchial Na + /K + -ATPase activity, Na + /K + /2Cl − cotransporter 1 , and cystic fibrosis transmembrane regulator 1 expression characteristic of smoltification, whereas there were no attendant changes in nbce1.2a expression. Nonetheless, branchial nbce1.2a levels were reduced in parr and smolts within 2 days of seawater exposure. In the intestine, gene transcript abundance for nbce1.1 increased from spring to summer in the anterior intestine, but not in the posterior intestine or pyloric caeca, and nbce1.1 and -1.2b expression in the intestine showed season-dependent transcriptional regulation by seawater exposure. Collectively, our data indicate that tissue-specific modulation of all three nbce1 isoforms underlies adaptive responses to seawater.

Journal of Comparative Physiology B: Biochemical, ↗