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Rhyolitic calderas of the Yukon-Tanana Terrane, east central Alaska: volcanic remnants of a mid-Cretaceous magmatic arc

Four large but poorly exposed rhyolitic calderas are present in the Yukon-Tanana terrane (YTT) in east central Alaska. At least two are mid-Cretaceous in age (~93 Ma). Similar volcanic rocks, the South Fork Volcanics, occur northeast of the Tintina fault in Yukon Territory. Evidence for the calderas consists of thick deposits of devitrified crystal- and lithic-rich densely welded tuff, interpreted as caldera fill, associated with lava domes or shallow intrusive rocks. Coeval outflow sheets have been largely stripped by erosion. The calderas are preserved within a northeast trending depression extending across the axis of the elongate mid-Cretaceous plutonic province. Trace element abundances in andesites and rhyolites associated with the caldera structures are similar to those of volcanic and plutonic rocks of subduction-related magmatic arcs developed on continental crust and thus are suggestive of formation in such an environment. Late Cretaceous and early Tertiary igneous rocks in the YTT near the calderas are interpreted to have been emplaced in a more extensional setting when the subduction-related magmatic front was farther oceanward.

Alaska

Marsh sediment in translation: A review of sediment transport across a natural tidal salt marsh in northern San Francisco Bay

Deposition of inorganic sediment is essential for the sustainability of tidal salt marshes. Understanding variability in sediment sources and the processes of sediment delivery to salt marshes are high priorities for decision-makers responsible for managing sediment and conserving and restoring marshes. Research on sediment transport to marshes is published in technical journals, but these scientific findings must be translated and communicated to inform critical decisions related to managing sediment in estuaries. We convened a diverse group of collaborators—including natural-resource managers, regulators, scientists, and restoration planners and practitioners—to review and interpret the results of previously published field investigations on and around the salt marsh at China Camp State Park in Marin County, California. We discussed and translated key results of those studies using new graphics and more accessible language. Here, we present a general introduction to the topic of sediment delivery to salt marshes, background descriptions of the China Camp marsh and the physical processes that we characterized there, key scientific conclusions, and proposed management implications. Key conclusions include (1) bay shallows are an important but variable source of marsh sediment, (2) flood tides and waves move sediment across the bay–marsh edge, (3) tidal creeks may not always import sediment to the marsh platform, and (4) protective effects of marsh vegetation depend on species and season. China Camp marsh is one of the last remaining pre-colonial salt marshes in the San Francisco Estuary and is unique in being relatively unmodified by humans and in retaining an unimpeded transition into natural uplands. Additional studies in a variety of marshes with different attributes and sediment regimes will broaden understanding of how best to conserve, manage, and restore tidal marshes that provide numerous ecosystem services to for humans and wildlife.

California

Hydrothermal circulation at the Cleft-Vance overlapping spreading center: Results of a magnetometric resistivity survey

We report on a magnetometric resistivity sounding carried out in the overlapping spreading center between the Cleft and Vance segments of the Juan de Fuca Ridge. The data collected reveal a strong three dimensionality in the crustal electrical resistivity structure on wavelengths of a few kilometers. Areas of reduced crustal electrical resistivities, with values approaching that of seawater, are seen beneath the neovolcanic zones of both active spreading centers. We interpret these reduced resistivities as evidence of active hydrothermal circulation within the uppermost 1 km of hot, young oceanic crust.

Journal of Geophysical Research B: Solid Earth

Olympic Fisher Reintroduction Project: Progress report 2008-2011

This progress report summarizes the final year of activities of Phase I of the Olympic fisher restoration project. The intent of the Olympic fisher reintroduction project is to reestablish a self-sustaining population of fishers on the Olympic Peninsula. To achieve this goal, the Olympic fisher reintroduction project released 90 fishers within Olympic National Park from 2008 to 2010. The reintroduction of fishers to the Olympic Peninsula was designed as an adaptive management project, including the monitoring of released fishers as a means to (1) evaluate reintroduction success, (2) investigate key biological and ecological traits of fishers, and (3) inform future reintroduction, monitoring, and research efforts. This report summarizes reintroduction activities and preliminary research and monitoring results completed through December 2011. The report is non-interpretational in nature. Although we report the status of movement, survival, and home range components of the research, we have not completed final analyses and interpretation of research results. Much of the data collected during the monitoring and research project will be analyzed and interpreted in the doctoral dissertation being developed by Jeff Lewis; the completion of this dissertation is anticipated prior to April 2013. We anticipate that this work, and analyses of other data collected during the project, will result in several peer-reviewed scientific publications in ecological and conservation journals, which collectively will comprise the final reporting of work summarized here. These publications will include papers addressing post-release movements, survival, resource selection, food habits, and age determination of fishers.

Report

Three-dimensional basin and fault structure from a detailed seismic velocity model of Coachella Valley, Southern California

The Coachella Valley in the northern Salton Trough is known to produce destructive earthquakes, making it a high seismic hazard area. Knowledge of the seismic velocity structure and geometry of the sedimentary basins and fault zones is required to improve earthquake hazard estimates in this region. We simultaneously inverted first P wave travel times from the Southern California Seismic Network (39,998 local earthquakes) and explosions (251 land/sea shots) from the 2011 Salton Seismic Imaging Project to obtain a 3-D seismic velocity model. Earthquakes with focal depths ≤10 km were selected to focus on the upper crustal structure. Strong lateral velocity contrasts in the top ~3 km correlate well with the surface geology, including the low-velocity (<5 km/s) sedimentary basin and the high-velocity crystalline basement rocks outside the valley. Sediment thickness is ~4 km in the southeastern valley near the Salton Sea and decreases to <2 km at the northwestern end of the valley. Eastward thickening of sediments toward the San Andreas fault within the valley defines Coachella Valley basin asymmetry. In the Peninsular Ranges, zones of relatively high seismic velocities (~6.4 km/s) between 2 to 4 km depth may be related to Late Cretaceous mylonite rocks or older inherited basement structures. Other high-velocity domains exist in the model down to 9 km depth and help define crustal heterogeneity. We identify a potential fault zone in Lost Horse Valley unassociated with mapped faults in Southern California from the combined interpretation of surface geology, seismicity, and lateral velocity changes in the model.

California

Antibody response to rabies vaccination in captive and freeranging wolves (Canis lupus)

Fourteen captive and five free-ranging Minnesota gray wolves (Canis lupus) were tested for the presence of rabies virus neutralizing antibodies (RVNA) after vaccination with an inactivated canine rabies vaccine. Blood was collected from all wolves prior to vaccination and at 1 mo postvaccination (PV) and from all captive and three wild wolves at 3 mo PV. In addition, one free-ranging wolf was sampled at 4 mo PV, and two free-ranging wolves were sampled at 6 mo PV. All wolves were seronegative prior to vaccination. RVNA were detected in 14 (100%) captive wolves and in four of five (80%) free-ranging wolves. The geometric mean titer of the captive wolves at 1 mo PV was significantly higher (P = 0.023) than in the free-ranging wolves. Five of 13 (38.5%) captive wolves and none of the three (0%) free-ranging wolves had measurable RVNA at 3 mo PV. No measurable RVNA were detected in the serum samples collected from the free-ranging wolves at 4 and 6 mo PV. These results should be interpreted with caution because of the small number of free-ranging wolves tested. Further research is needed to properly assess immune function and antibody response to vaccination in captive wolves in comparison with their free-ranging counterparts.

Journal of Zoo and Wildlife Medicine

Modern pollen deposition in Long Island Sound

Palynological analyses of 20 surface sediment samples collected from Long Island Sound show a pollen assemblage dominated by Carya, Betula, Pinus, Quercus, Tsuga , and Ambrosia , as is consistent with the regional vegetation. No trends in relative abundance of these pollen types occur either from west to east or associated with modern riverine inputs throughout the basin. Despite the large-scale, long-term removal of fine-grained sediment from winnowed portions of the eastern Sound, the composition of the pollen and spore component of the sedimentary matrix conforms to a basin-wide homogeneous signal. These results strongly support the use of select regional palynological boundaries as chronostratigraphic tools to provide a framework for interpretation of the late glacial and Holocene history of the Long Island Sound basin sediments.

Connecticut, New York

Effects of laboratory treatments on silver and other elements in native gold

Interpretation of the element content of gold and of alloy proportions of gold and silver may have useful applications in prospecting and ore genesis studies. The commonly used methods of concentration and recovery of gold for analysis (acid leach, roasting, or amalgamation), however, alter the content of silver and other elements in the gold. The treatment of gold with four mineral acids (HF, HCL, H 2 S0 4 , and HNO 3 ) and combinations of these acids, amalgamation of the gold, and roasting the gold in a muffle furnace at 650&deg;C for 8 hours caused losses of 0-100 percent of the elements studied. In some of the samples studied these treatments also caused losses totaling as much as 50 percent, by weight, of the silver content (which made up 20 percent of the total sample weight). The other elements studied show similar behavior to a lesser extent. The results of these studies show that before one interprets compositional analyses for prospecting or other applications he must know to what extent a recovery treatment changes the composition of the elements.

Journal of Research of the U.S. Geological Survey

Cauldron subsidence near Mount Lewis, Nevada: A misconception

The map and interpretation of the geology of the Mount Lewis quadrangle, northern Shoshone Range, Nev., contained in U.S. Geological Survey Professional Paper 465 (1965) have recently been criticized and reinterpreted by C. T. Wrucke and M. L. Silberman in Professional Paper 876 (1975). I contend, however, that the reinterpretation ignores much cogent evidence and is quite inconsistent with the geometric disposition of the rocks. No justification exists for postulating a caldera. The faults considered by Wrucke and Silberman to constitute the bounding faults of a caldera hence normal faults downthrown toward the "caldera" are in part nonexistent, in part a strike-slip fault formed concurrently with the Roberts thrust fault in Devonian and Mississippian time, and in part a listric thrust branching into the hanging wall of the main thrust. In short, the two real faults of Wrucke and Silberman's postulated caldera ring are about 200 million years older than the Oligocene volcanic rocks dated by Wrucke and Silberman. The paucity of dikes associated with the faults is thus readily understood, whereas it would be highly anomalous were the faults defining a caldera. The evidence for our thrust-fault interpretation was presented in the text, map, and sections of Professional Paper 465; further detail is included here. The evidence is clear and unequivocal: no caldera is here present.

Nevada

Techniques to improve ecological interpretability of black box machine learning models

Statistical modeling of ecological data is often faced with a large number of variables as well as possible nonlinear relationships and higher-order interaction effects. Gradient boosted trees (GBT) have been successful in addressing these issues and have shown a good predictive performance in modeling nonlinear relationships, in particular in classification settings with a categorical response variable. They also tend to be robust against outliers. However, their black-box nature makes it difficult to interpret these models. We introduce several recently developed statistical tools to the environmental research community in order to advance interpretation of these black-box models. To analyze the properties of the tools, we applied gradient boosted trees to investigate biological health of streams within the contiguous USA, as measured by a benthic macroinvertebrate biotic index. Based on these data and a simulation study, we demonstrate the advantages and limitations of partial dependence plots (PDP), individual conditional expectation (ICE) curves and accumulated local effects (ALE) in their ability to identify covariate–response relationships. Additionally, interaction effects were quantified according to interaction strength (IAS) and Friedman’s H 2 "> H 2 statistic. Interpretable machine learning techniques are useful tools to open the black-box of gradient boosted trees in the environmental sciences. This finding is supported by our case study on the effect of impervious surface on the benthic condition, which agrees with previous results in the literature. Overall, the most important variables were ecoregion, bed stability, watershed area, riparian vegetation and catchment slope. These variables were also present in most identified interaction effects. In conclusion, graphical tools (PDP, ICE, ALE) enable visualization and easier interpretation of GBT but should be supported by analytical statistical measures. Future methodological research is needed to investigate the properties of interaction tests. Supplementary materials accompanying this paper appear on-line.

Journal of Agricultural, Biological, and Environme

Intrusion of horizontal dikes: tectonic significance of Middle Proterozoic diabase sheets widespread in the upper crust of the southwestern United States

Initially horizontal sheet intrusions of Middle Proterozoic diabase are abundant in a region 650 by 300 km across in Arizona and California. The diabase forms discordant sheets in basement granite and gneiss and sills in overlying shelf sedimentary sequences. Massive granite is the most common basement host for the sheets, probably because it fractured more easily than foliated hosts during sheet emplacement. Steep feeder dikes are rare compared to the sheets. The diabase in many places is exposed in fault blocks that were tilted during Tertiary tectonic extension. Structure sections restored from the map patterns of upended blocks show that the sheets were intruded at levels throughout the upper crust, to depths of at least 13 km. Sheet intrusion implies a vertical orientation of the least compressive stress, so I conclude that the crust was under tectonic compression or in an isotropic state of stress at the time of diabase intrusion about 1.1 Ga. Magma overpressures, water encountered by rising magma, vertical changes in the crustal stress regime, and flotation of low-density granite all may be important factors for sheet intrusion. The stress conditions suggested by the presence of the sheets argue against an extensional tectonic regime earlier proposed for the diabase event. The diabase province contrasts structurally with similar-age provinces of basaltic magmatism elsewhere in North America that show evidence of tectonic extension, such as the midcontinent rift. The consistent orientations of the sheets commonly allow them to be used as structural markers for postdiabase deformation of basement blocks. Sheet intrusions in the geologic record may be seriously underreported. Their recognition is important for the interpretation of seismic reflection profiles of continental crust. Sheets in Arizona may be responsible for the Bagdad reflection sequence, which extends to depths of at least 15 km.

Journal of Geophysical Research

A unique approach to estimating lateral anisotropy in complex geohydrologic environments

Aquifers in fractured rock or karstic settings are likely to have anisotropic transmissivity distributions. Aquifer tests that are performed in these settings also are frequently affected by leakage from adjacent confining units. Finite-difference models such as MODFLOW are convenient tools for estimating the hydraulic characteristics of the stressed aquifer and adjacent confining units but are poor tools for the estimation of lateral anisotropy. This limitation of finite-difference methods can be overcome by application of the spin method, a technique whereby the positions of the observation wells are rotated about the production well to estimate anisotropy and orientation. Formal parameter estimation is necessary to analyze aquifer tests because of the number of parameters that are estimated. As a test, transmissivity, anisotropy, and orientation were successfully estimated for a simple hypothetical problem with known properties. The technique also was applied to estimate hydraulic properties of the Santee Limestone/Black Mingo (SL/BM) aquifer and a leaky confining unit beneath Charleston, South Carolina. A 9-day aquifer test with an average discharge of 6441/min was analyzed numerically. Drawdowns in the SL/BM aquifer and confining unit were simulated with a 12-layer MODFLOW model that was discretized into 81 rows of 81 columns. Simulated drawdowns at seven observation wells that ranged from 23 to 2700 m from the production well were matched to measured drawdowns. Transmissivity estimated along the minor axis ranged from 10 to 15 m 2 /day and along the major axis ranged from 80 to 10Om 2 /day. The major axis of transmissivity was oriented along compass heading 116° (degrees clockwise from north), which agrees with geologic interpretations. Vertical hydraulic conductivity and specific storage estimates for the overlying confining unit were 4 x 10 -5 m/day and 2 x 10 -4 1/m, respectively.

South Carolina

Stabilities of calcite and aragonite

A revaluation of the 25&deg; C activity-product constants of calcite ( K C ) and aragonite ( K A ) was made on the basis of the known solubilities of these phases for which the activity of total dissolved calcium was corrected for the presence of the ion pair CaHCO 3 + in the aqueous phase. The value of the dissociation constant of CaHCO 3 + was taken to be 10 -1.225&plusmn;0.02 . This value, combined with values of the analytical concentrations in solutions with partial pressure P CO2 =0.97 atmosphere, leads to K C =l0 -8.52&plusmn;0.04 and K A = 10 -8.36&plusmn;0.04 . Based on these K values, standard free energies of formation of calcite and aragonite were calculated to be -270,144&plusmn;375 and -269,926&plusmn;375 calories mole -1 , (-1,130,282&plusmn;1,569 and -1,129,370&plusmn;1,569 joules mole -1 ), respectively. From the 25&deg;C K values, using appropriate entropy and heat capacity data, values of K C and K A were calculated over the temperature range 0&deg; to 200&deg;C. Possible errors in interpretation of measured pH values and inferred P CO2 values and the bearing of these errors on calculations of K values are discussed.

Journal of Research of the U.S. Geological Survey

Magnetotelluric investigation of the Vestfold Hills and Rauer Group, East Antarctica

The Vestfold Hills and Rauer Group in East Antarctica have contrasting Archean to Neoproterozoic geological histories and are believed to be juxtaposed along a suture zone that now lies beneath the S&oslash;rsdal Glacier. Exact location and age of this suture zone are unknown, as is its relationship to regional deformation associated with the amalgamation of East Gondwana. To image the suture zone, magnetotelluric (MT) data were collected in Prydz Bay, East Antarctica, mainly along a profile crossing the S&oslash;rsdal Glacier and regions inland of the Vestfold Hills and Rauer Group islands. Time-frequency analysis of the MT time series yielded three important observations: (1) Wind speeds in excess of &sim;8 m/s reduce coherence between electric and magnetic fields due to charged wind-blown particles of ice and snow. (2) Estimation of the MT transfer function is best between 1000 and 1400 UT when ionospheric Hall currents enhance the magnetic source field. (3) Nonplanar source field effects were minimal but detectable and removed from estimation of the MT transfer function. Inversions of MT data in 2-D and 3-D produce similar resistivity models, where structures in the preferred 3-D resistivity model correlate strongly with regional magnetic data. The electrically conductive Rauer Group is separated from the less conductive Vestfold Hills by a resistive zone under the S&oslash;rsdal Glacier, which is interpreted to be caused by oxidation during suturing. Though a suture zone has been imaged, no time constrains on suturing can be made from the MT data.

Journal of Geophysical Research B: Solid Earth

Joint 3-D tomographic imaging of Vp, Vs and Vp/Vs and hypocenter relocation at Sinabung volcano, Indonesia from November to December 2013

We conducted travel time tomography using P- and S-wave arrival times of volcanic-tectonic (VT) events that occurred between November and December 2013 to determine the three-dimensional (3D) seismic velocity structure (Vp, Vs, and Vp/Vs) beneath Sinabung volcano, Indonesia in order to delineate geological subsurface structure and to enhance our understanding of the volcanism itself. This was a time period when phreatic explosions became phreatomagmatic and then magma migrated to the surface forming a summit lava dome. We used 4846 VT events with 16,138 P- and 16,138 S-wave arrival time phases recorded by 6 stations for the tomographic inversion. The relocated VTs collapse into three clusters at depths from the surface to sea level, from 2 to 4 km below sea level, and from 5 to 8.5 km below sea level. The tomographic inversion results show three prominent regions of high Vp/Vs (~ 1.8) beneath Sinabung volcano at depths consistent with the relocated earthquake clusters. We interpret these anomalies as intrusives associated with previous eruptions and possibly surrounding the magma conduit, which we cannot resolve with this study. One anomalous region might contain partial melt, at sea level and below the eventual eruption site at the summit. Our results are important for the interpretation of a conceptual model of the “plumbing system” of this hazardous volcano.

Sinabung Volcano

Observation of the geology and geomorphology of the 1999 Marsokhod test site

The Marsokhod rover returned data from six stations that were used to decipher the geomorphology and geology of a region not previously visited by members of the geomorphology field team. Satellite images and simulated descent images provided information about the regional setting. The landing zone was on an alluvial apron flanking a mountain block to the west and a playa surface to the east. Rover color images, infrared spectra analysis of the mountains, and the apron surface provided insight into the rock composition of the nearby mountains. From the return data the geomorphology team interpreted the region to consist of compressionally deformed, ancient marine sediments and igneous rocks exposed by more recent extensional tectonics. Unconsolidated alluvial materials blanket the lower flanks of the mountains. An ancient shoreline cut into alluvial material marks a high stand of water during a past, wetter climate period. Playa sediments floor a present-day, seasonally, dry lake. Observations made by the rover using panoramic and close-up (hand specimens-scale) image data and color scene data confirmed the presence of boulders, cobbles, and fines of various provinces. Rover traverses to sites identified as geologically distinct, such as fan, channel, shoreline, and playa, provided useful clues to the geologic interpretations. Analysis of local rocks was given context only through comparison with distant geologic features. These results demonstrated the importance of a multifaceted approach to site interpretation through comparison of interpretations derived by differing geologic techniques.

California

Dark materials in Valles Marineris: Indications of the style of volcanism and magmatism on Mars

Rifting on the equatorial canyon system of Valles Marineris provides a unique view of the interior of the Martian crust to depths reaching 7 km, exposing several in situ bedrock units which testify to past volcanic and magmatic processes on Mars. A thick, regionally extensive deposit observed in Coprates and Juventae chasmata is interpreted on the basis of spectral reflectance, erosional morphology, and tendency for eolian mobilization to be composed of mafic glass, possibly an ancient Martian analogue of the lunar terra mantling deposits. Spectral mapping suggests that the dark floor‐covering materials in the lower canyons are derived from this unit. A series of cliffs in the Ophir Chasma wall rock is interpreted to be exposures of resistant bedrock; the spectral signature of this massive and uniform unit most closely resembles that of terrestrial mafic rocks altered to or coated by crystalline hematite. Application of computer mapping techniques to probable young volcanic materials in the central troughs yields an inferred distribution of volcanic activity consistent with the interpretation of extrusion along faults near the margins of the canyon floors. This result supports the hypothesis that the valles originated through tectonic extension.

Journal of Geophysical Research B: Solid Earth

Comendite (peralkaline rhyolite) and basalt in the Mitu Group, Peru: Evidence for Permian-Triassic lithospheric extension in the central Andes

The Mitu Group consists of generally coarse clastic strata and volcanic rock of Permian and (or) Triassic age filling elongate basins that parallel the general structural trend of the Peruvian Andes. Volcanic rocks of the Mitu Group include peralkaline and nonperalkaline rhyolite and subalkaline basalt. To our knowledge, the peralkaline rhyolites are the first of this rock type reported from South America. The presence of appreciable volumes of peralkaline rhyolite and basalt, supports the interpretation that the Mitu Group was deposited in major graben structures that resulted from lithospheric extension produced by rifting or possible backarc extension.

central Andes Mountains