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USGS2011

Aquatic ecology of the Elwha River estuary prior to dam removal: Chapter 7 in Coastal habitats of the Elwha River, Washington--biological and physical patterns and processes prior to dam removal

The removal of two long-standing dams on the Elwha River in Washington State will initiate a suite of biological and physical changes to the estuary at the river mouth. Estuaries represent a transition between freshwater and saltwater, have unique assemblages of plants and animals, and are a critical habitat for some salmon species as they migrate to the ocean. This chapter summarizes a number of studies in the Elwha River estuary, and focuses on physical and biological aspects of the ecosystem that are expected to change following dam removal. Included are data sets that summarize (1) water chemistry samples collected over a 16 month period; (2) beach seining activities targeted toward describing the fish assemblage of the estuary and migratory patterns of juvenile salmon; (3) descriptions of the aquatic and terrestrial invertebrate communities in the estuary, which represent an important food source for juvenile fish and are important water quality indicators; and (4) the diet and growth patterns of juvenile Chinook salmon in the lower Elwha River and estuary. These data represent baseline conditions of the ecosystem after nearly a century of changes due to the dams and will be useful in monitoring the changes to the river and estuary following dam removal.

Washington↗

USGS1995

Statistical characteristics of stream discharge in tributaries of selected estuaries in southern New Jersey

This report presents the results of a study, done in cooperation with the New Jersey Department of Environmental Protection, to analyze the characteristics of stream discharge for tributaries of the estuaries of the Metedeconk, Toms, Great Egg Harbor, Tuckahoe, and Maurice Rivers. The following statistics were calculated for selected streamflow-gaging stations: (1) mean annual and mean monthly discharge, and (2) lowest annual 7-day mean discharge for selected recurrence intervals.Values of lowest annual 7-day mean discharge were calculated for the entire year and for the 3-, 4-, 5-, and 6-month periods of greatest tributary discharge. The monthly variation in discharge was examined. Values of discharge at different stations were converted to runoff and compared; runoff is expressed as discharge per unit area of drainage for a given period. Tests for trend were conducted on values of monthly discharge and lowest annual discharges at continuous-record stations. Statistics were determined from discharge records of the U.S. Geological Survey. The monthly variation in discharge is similar for most streams in the study area; discharge is greatest during March and April and least during August, September, and October. The 3-, 4-, 5-, and 6-month periods of greatest discharge are February through April, January through April, January through May, and December through May, respectively. Mean annual runoff is greater in the tributaries of the Metedeconk and Toms River estuaries than in the tributaries of the other estuaries. Runoff in tributaries of these two basins ranges from 24 to 29 inches per year; the corresponding range for tributaries of the other estuaries is 16 to 23 inches per year. Trend analysis showed that values of lowest annual discharges at continuous-record stations on tributaries of all five estuaries decreased during water years 1970-89. For four stations, values of 183-day lowest annual discharge during the complete year decreased; for three of lowest annual 7- or 30-day mean discharge during the 3-, 4-, 5-, and 6-month periods of greatest discharge decreased. There were no trends in monthly discharge for water years 1970-89. For other periods tested, there were no trends either in lowest annual discharges or monthly discharges. Discharge statistics at the heads of tide were calculated from the period-of-record characteristics at continuous-record stations and characteristics determined for partial-record stations. Results show that discharge at the heads of tide of the estuaries is directly related to the drainage area.Drainage areas and discharge are greatest for the Great Egg Harbor and Maurice Rivers, whose mean annual discharges are 340 and 310 cubic feet per second, respectively. Mean annual discharges of the Toms and Metedeconk Rivers are 220 and 140 cubic feet per second, respectively. Drainage area and discharge of the Tuckahoe River are the smallest of the estuaries studied; mean annual discharge is 43.9 cubic feet per second.

New Jersey↗

USGS2008

Suspended sediment transport in the freshwater reach of the Hudson river estuary in eastern New York

Deposition of Hudson River sediment into New York Harbor interferes with navigation lanes and requires continuous dredging. Sediment dynamics at the Hudson estuary turbidity maximum (ETM) have received considerable study, but delivery of sediment to the ETM through the freshwater reach of the estuary has received relatively little attention and few direct measurements. An acoustic Doppler current profiler was positioned at the approximate limit of continuous freshwater to develop a 4-year time series of water velocity, discharge, suspended sediment concentration, and suspended sediment discharge. This data set was compared with suspended sediment discharge data collected during the same period at two sites just above the Hudson head-of-tide (the Federal Dam at Troy) that together represent the single largest source of sediment entering the estuary. The mean annual suspended sediment-discharge from the freshwater reach of the estuary was 737,000 metric tons. Unexpectedly, the total suspended sediment discharge at the study site in November and December slightly exceeded that observed during March and April, the months during which rain and snowmelt typically result in the largest sediment discharge to the estuary. Suspended sediment discharge at the study site exceeded that from the Federal Dam, even though the intervening reach appears to store significant amounts of sediment, suggesting that 30-40% of sediment discharge observed at the study site is derived from tributaries to the estuary between the Federal Dam and study site. A simple model of sediment entering and passing through the freshwater reach on a timescale of weeks appears reasonable during normal hydrologic conditions in adjoining watersheds; however, this simple model may dramatically overestimate sediment delivery during extreme tributary high flows, especially those at the end of, or after, the "flushing season" (October through April). Previous estimates of annual or seasonal sediment delivery from tributaries and the Federal Dam to the ETM and harbor may be high for those years with extreme tributary high-flow events. ?? 2008 Coastal and Estuarine Research Federation.

Estuaries and Coasts↗

USGS2024

Climate change scenarios for air and water temperatures in the upper San Francisco Estuary: Implications for thermal regimes and Delta Smelt

Climate projections and their effects in the San Francisco Estuary have been evaluated as part of the US Geological Survey’s CASCaDE2 project. Understanding the ecological effects of climate change can help manage and maintain the ecological health and productivity of the San Francisco Estuary. In this study, we assessed downscaled air temperature data from 10 global climate models (GCMs) under two representative concentration pathway (RCP) trajectories for greenhouse gas concentrations for three regions of the San Francisco Estuary: Sacramento–San Joaquin Delta, Suisun and Grizzly bays, and Suisun Marsh. We also used previously derived regression models to estimate future water temperatures at 16 locations in the upper San Francisco Estuary. We used a thermal regime approach to summarize water temperature projections to investigate changes to the thermal regime of the upper San Francisco Estuary, and used the Delta Smelt (Hypomesus transpacificus) to demonstrate the effects that a warming climate may have on the habitat needs of this fish species. Our results suggested there were no major differences in the extent of air-temperature warming among the three regions. Annual average air temperatures were projected to increase approximately 2.0 °C and 4.7 °C by the end of the century for the low and high RCP scenarios, respectively. We found timing, frequency, and magnitude metrics varied by period and RCP scenario, while duration and variability metrics varied by space for water-temperature thermal regimes. For example, the spawning window for Delta Smelt (thermal-regime duration metric) is projected to expand in the future, with spawning starting earlier for both RCP scenarios for most sites. Although our thermal-regime analysis focused on the life history of Delta Smelt, similar approaches could be used to assess climate-change threats to a wide array of native and invasive terrestrial and aquatic species found in San Francisco Estuary.

California↗

USGS2015

Net ecosystem production and organic carbon balance of U.S. East Coast estuaries: A synthesis approach

Net ecosystem production (NEP) and the overall organic carbon budget for the estuaries along the East Coast of the United States are estimated. We focus on the open estuarine waters, excluding the fringing wetlands. We developed empirical models relating NEP to loading ratios of dissolved inorganic nitrogen to total organic carbon, and carbon burial in the sediment to estuarine water residence time and total nitrogen input across the landward boundary. Output from a data-constrained water quality model was used to estimate inputs of total nitrogen and organic carbon to the estuaries across the landward boundary, including fluvial and tidal-wetland sources. Organic carbon export from the estuaries to the continental shelf was computed by difference, assuming steady state. Uncertainties in the budget were estimated by allowing uncertainties in the supporting model relations. Collectively, U.S. East Coast estuaries are net heterotrophic, with the area-integrated NEP of −1.5 (−2.8, −1.0) Tg C yr −1 (best estimate and 95% confidence interval) and area-normalized NEP of −3.2 (−6.1, −2.3) mol C m −2 yr −1 . East Coast estuaries serve as a source of organic carbon to the shelf, exporting 3.4 (2.0, 4.3) Tg C yr −1 or 7.6 (4.4, 9.5) mol C m −2 yr −1 . Organic carbon inputs from fluvial and tidal-wetland sources for the region are estimated at 5.4 (4.6, 6.5) Tg C yr −1 or 12 (10, 14) mol C m −2 yr −1 and carbon burial in the open estuarine waters at 0.50 (0.33, 0.78) Tg C yr −1 or 1.1 (0.73, 1.7) mol C m −2 yr −1 . Our results highlight the importance of estuarine systems in the overall coastal budget of organic carbon, suggesting that in the aggregate, U.S. East Coast estuaries assimilate (via respiration and burial) ~40% of organic carbon inputs from fluvial and tidal-wetland sources and allow ~60% to be exported to the shelf.

Global Biogeochemical Cycles↗

USGS2001

Nutrient transport to the Swan - Canning Estuary, Western Australia

Catchment nutrient availability in Western Australia is primarily controlled by the disposal of animal waste and the type and rate of fertilizer application, particularly on the relatively narrow (~25 km wide), sandy coastal plain. Nitrogen (N) and phosphorous (P) concentrations and fluxes during the wet season of 15 tributaries, including four urban drains to the Swan-Canning Estuary, were evaluated from 1986 to 1992 and additionally concentrations only were evaluated throughout the year from 1993 to 1996. Concentrations of filtered reactive P (FRP) and total P (TP) were generally low, with the volume-weighted means for all sites being 0.06 mg 1-1 and 0.12 mg 1-1 respectively. The urban drains had higher TP concentrations (volume-weighted mean of 0.21 mg 1-1) than the streams (0.12 mg 1-1), with the high concentrations associated with particulate matter. Total inorganic N (TIN, NH4N plus NO3N) and total N (TN), which is of interest to eutrophic status of the N-limited estuary, were likewise low, compared with other developed areas having a similar climate. Both TIN and TN were higher in the urban drains (0.76 mg 1-1 and 1.5 mg 1-1 respectively) than the streams (0.31 mg 1-1 and 1.2 mg 1-1 respectively). The Avon River, which drains 98.5% of the 121 000 km2 catchment area, contributes most of the N (0.03 kg ha-1 year-1 or 65%) and a high percentage of the P (<0.01 kg ha-1 year-1 or 32%) to the estuaries. The Avon River nutrient fluxes are much less than other tributaries closer to the estuary. The coastal plain receives significantly higher rainfall (1,200 mm year-1) and has more intense horticulture and animal production than inland areas (<300 mm year-1). Annual rainfall is seasonal, occuring primarily from May through December. The surficial aquifers on the coastal plain generally are sandy with a low nutrient retention capacity, and rapidly transmit soluble and colloidal material in subsurface flow. Ellen Brook, on the coastal plain, drains pastures treated with superphosphate and has the highest FRP (0.51 mg 1-1), TP (0.7 mg 1-1) and TN (2.1 mg 1-1) of any tributary to the estuary. The coastal plain is also undergoing urbanization, particularly in areas adjacent to the estuary. Nutrients are subsequently available for transport during the onset of seasonal wet weather. Perennial baseflow from urban areas is an important source of nutrients. Water yield from the urban areas was high, being as much as 50% of annual rainfall. The timing of the nutrients delivered by the tributaries may be an important control on estuarine ecology. Copyright ?? 2001 John Wiley and Sons, Ltd.

Hydrological Processes↗

USGS2015

Rapid water quality change in the Elwha River estuary complex during dam removal

Dam removal in the United States is increasing as a result of structural concerns, sedimentation of reservoirs, and declining riverine ecosystem conditions. The removal of the 32 m Elwha and 64 m Glines Canyon dams from the Elwha River in Washington, U.S.A., was the largest dam removal project in North American history. During the 3 yr of dam removal—from September 2011 to August 2014—more than ten million cubic meters of sediment was eroded from the former reservoirs, transported downstream, and deposited throughout the lower river, river delta, and nearshore waters of the Strait of Juan de Fuca. Water quality data collected in the estuary complex at the mouth of the Elwha River document how conditions in the estuary changed as a result of sediment deposition over the 3 yr the dams were removed. Rapid and large-scale changes in estuary conditions—including salinity, depth, and turbidity—occurred 1 yr into the dam removal process. Tidal propagation into the estuary ceased following a large sediment deposition event that began in October 2013, resulting in decreased salinity, and increased depth and turbidity in the estuary complex. These changes have persisted in the system through dam removal, significantly altering the structure and functioning of the Elwha River estuary ecosystem.

Washington↗

USGS2005

Geochemistry of the Amazon Estuary

The Amazon River supplies more freshwater to the ocean than any other river in the world. This enormous volume of freshwater forces the estuarine mixing out of the river channel and onto the continental shelf. On the continental shelf, the estuarine mixing occurs in a very dynamic environment unlike that of a typical estuary. The tides, the wind, and the boundary current that sweeps the continental shelf have a pronounced influence on the chemical and biological processes occurring within the estuary. The dynamic environment, along with the enormous supply of water, solutes and particles makes the Amazon estuary unique. This chapter describes the unique features of the Amazon estuary and how these features influence the processes occurring within the estuary. Examined are the supply and cycling of major and minor elements, and the use of naturally occurring radionuclides to trace processes including water movement, scavenging, sediment-water interaction, and sediment accumulation rates. The biogeochemical cycling of carbon, nitrogen, and phosphorus, and the significances of the Amazon estuary in the global mass balance of these elements are examined.

Amazon River↗

USGS2013

Use of glacier river-fed estuary channels by juvenile coho salmon: transitional or rearing habitats?

Estuaries are among the most productive ecosystems in the world and provide important rearing environments for a variety of fish species. Though generally considered important transitional habitats for smolting salmon, little is known about the role that estuaries serve for rearing and the environmental conditions important for salmon. We illustrate how juvenile coho salmon Oncorhynchus kisutch use a glacial river-fed estuary based on examination of spatial and seasonal variability in patterns of abundance, fish size, age structure, condition, and local habitat use. Fish abundance was greater in deeper channels with cooler and less variable temperatures, and these habitats were consistently occupied throughout the season. Variability in channel depth and water temperature was negatively associated with fish abundance. Fish size was negatively related to site distance from the upper extent of the tidal influence, while fish condition did not relate to channel location within the estuary ecotone. Our work demonstrates the potential this glacially-fed estuary serves as both transitional and rearing habitat for juvenile coho salmon during smolt emigration to the ocean, and patterns of fish distribution within the estuary correspond to environmental conditions.

Alaska↗

USGS2007

A classification of U.S. estuaries based on physical and hydrologic attributes

A classification of U.S. estuaries is presented based on estuarine characteristics that have been identified as important for quantifying stressor-response relationships in coastal systems. Estuaries within a class have similar physical and hydrologic characteristics and would be expected to demonstrate similar biological responses to stressor loads from the adjacent watersheds. Nine classes of estuaries were identified by applying cluster analysis to a database for 138 U.S. estuarine drainage areas. The database included physical measures of estuarine areas, depth and volume, as well as hydrologic parameters (i.e., tide height, tidal prism volume, freshwater inflow rates, salinity, and temperature). The ability of an estuary to dilute or flush pollutants can be estimated using physical and hydrologic properties such as volume, bathymetry, freshwater inflow and tidal exchange rates which influence residence time and affect pollutant loading rates. Thus, physical and hydrologic characteristics can be used to estimate the susceptibility of estuaries to pollutant effects. This classification of estuaries can be used by natural resource managers to describe and inventory coastal systems, understand stressor impacts, predict which systems are most sensitive to stressors, and manage and protect coastal resources. ?? Springer Science+Business Media B.V. 2007.

Environmental Monitoring and Assessment↗

USGS2006

Biogeochemical transport in the Loxahatchee River estuary, Florida: The role of submarine groundwater discharge

The distributions of dissolved organic carbon (DOC), Ba, U, and a suite of naturally occurring radionuclides in the U/Th decay series (222Rn, 223,224,226,228Ra) were studied during high- and low-discharge conditions in the Loxahatchee River estuary, Florida to examine the role of submarine groundwater discharge in estuarine transport. The fresh water endmember of this still relatively pristine estuary may reflect not only river-borne constituents, but also those advected during active groundwater/surface water (hyporheic) exchange. During both discharge conditions, Ba concentrations indicated slight non-conservative mixing. Such Ba excesses could be attributed either to submarine groundwater discharge or particle desorption processes. Estuarine dissolved organic carbon concentrations were highest at salinities closest to zero. Uranium distributions were lowest in the fresh water sites and mixed mostly conservatively with an increase in salinity. Suspended particulate matter (SPM) concentrations were generally lowest (< 5??mg L- 1) close to zero salinity and increased several-fold (??? 18??mg L- 1; low discharge) toward the seaward endmember, which may be attributed to dynamic resuspension of bottom sediments within Jupiter Inlet. Surface water-column 222Rn activities were most elevated (> 28??dpm L- 1) at the freshwater endmember of the estuary and appear to identify regions of the river most influenced by the discharge of fresh groundwater. Activities of four naturally occurring isotopes of Ra (223,224,226,228Ra) in this estuary and select adjacent shallow groundwater wells yield mean estuarine water-mass transit times of less than 1 day; these values are in close agreement to those calculated by tidal prism and tidal frequency. Submarine groundwater discharge rates to the Loxahatchee River estuary were calculated using a tidal prism approach, an excess 226Ra mass balance, and an electromagnetic seepage meter. Average SGD rates ranged from 1.0 to 3.8 ?? 105??m3 d- 1 (20-74??L m- 2 d- 1), depending on river-discharge stage. Such calculated SGD estimates, which must include both a recirculated as well as fresh water component, are in close agreement with results obtained from a first-order watershed mass balance. Average submarine groundwater discharge rates yield NH4+ and PO4- 3 flux estimates to the Loxahatchee River estuary that range from 62.7 to 1063.1 and 69.2 to 378.5????mol m- 2 d- 1, respectively, depending on river stage. SGD-derived nutrient flux rates are compared to yearly computed riverine total N and total P load estimates. ?? 2006 Elsevier B.V. All rights reserved.

Marine Chemistry↗

USGS2020

Determining the drivers of suspended sediment dynamics in tidal marsh-influenced estuaries using high-resolution ocean color remote sensing

Sediment budgets are a critical metric to assess coastal marsh vulnerability to sea-level rise and declining riverine sediment inputs. However, calculating accurate sediment budgets is challenging in tidal marsh-influenced estuaries where suspended sediment concentrations (SSC) typically vary on scales of hours and meters, and where SSC dynamics are driven by a complex and often site-specific interplay of hydrodynamic and meteorological conditions. The mapping of SSC using ocean-color remote sensing is well established and can help capture the spatio-temporal variability needed to determine the dominant drivers regulating sediment budgets. However, the coarse spatial resolution of traditional ocean-color sensors (1-km) generally precludes their use in coastal-marsh estuaries. Here, using the Plum Island Estuary (Massachusetts, USA) as an example, we demonstrate that high-spatial-resolution maps of SSC derived from Landsat-8 Operational Land Imager (OLI) and Sentinel-2A/B Multispectral Instruments (MSI) can be used to determine the main drivers of SSC dynamics in tidal marsh-influenced estuaries, despite the long revisit time of these sensors. Local empirical algorithms between SSC and remote sensing reflectance were derived and applied to a total of 46 clear-sky scenes collected by the OLI and the MSI between 2013 and 2018. The analysis revealed that this 5-year record was sufficient to capture a representative range of meteorological and tidal conditions required to determine the main drivers of SSC dynamics in this mid-latitude system. The interplay between river and tidal flows dominated SSC dynamics in this estuary, whereas wind-driven resuspension had more moderate effects. The SSC were higher during spring because of increased river discharge due to snowmelt. Tidal asymmetry also enhanced sediment resuspension during flood tides, possibly favoring deposition on marsh platforms. Together, water level, water-level rate of change, river discharge and wind speed were able to explain > 60% of the variability in the main-channel thalweg-averaged SSC, thereby facilitating future prediction of SSC from these readily available variables. This study demonstrates that the existing multi-year records of high-resolution remote sensing can provide a representative depiction of SSC dynamics in hydrodynamically-complex and small-scale estuaries that moderate-resolution ocean color remote sensing and in situ measurements are unable to capture.

Massachusetts↗

USGS2010

Spring climate and salinity in the San Francisco Bay Estuary

Salinity in the San Francisco Bay Estuary almost always experiences its yearly maximum during late summer, but climate variability produces marked interannual variations. The atmospheric circulation pattern impacts the estuary primarily through variations of runoff from rainfall and snowmelt from the Sierra Nevada and, secondarily, through variations in the near-surface salinity in the coastal ocean. While winter precipitation is the primary influence upon salinity in the estuary, spring climate variations also contribute importantly to salinity fluctuations. Spring atmospheric circulation influences both the magnitude and the timing of freshwater flows, through anomalies of precipitation and temperature. To help discriminate between the effects of these two influences, the record is divided into subsets according to whether spring conditions in the region are cool and wet, warm and wet, cool and dry, or warm and dry. Warm springs promote early snowmelt-driven flows, and cool springs result in delayed flows. In addition to effects of winter and spring climate variability operating on the watershed, there are more subtle effects that are transmitted into the estuary from the coastal ocean. These influences are most pronounced in cool and dry springs with high surface salinity (SS) in the coastal ocean versus cool and wet springs with low SS in the coastal ocean. A transect of SS records at stations from the mouth to the head of the bay suggests that the coastal ocean anomaly signal is attenuated from the mouth to the interior of the estuary. In contrast, a delayed, postsummer signal caused by winter and spring runoff variations from the upstream watershed are most pronounced at the head of the estuary and attenuate toward the mouth.

California↗

USGS2016

Estuary-ocean connectivity: Fast physics, slow biology

Estuaries are connected to both land and ocean so their physical, chemical, and biological dynamics are influenced by climate patterns over watersheds and ocean basins. We explored climate-driven oceanic variability as a source of estuarine variability by comparing monthly time series of temperature and chlorophyll- a inside San Francisco Bay with those in adjacent shelf waters of the California Current System (CCS) that are strongly responsive to wind-driven upwelling. Monthly temperature fluctuations inside and outside the Bay were synchronous, but their correlations weakened with distance from the ocean. These results illustrate how variability of coastal water temperature (and associated properties such as nitrate and oxygen) propagates into estuaries through fast water exchanges that dissipate along the estuary. Unexpectedly, there was no correlation between monthly chlorophyll- a variability inside and outside the Bay. However, at the annual scale Bay chlorophyll- a was significantly correlated with the Spring Transition Index (STI) that sets biological production supporting fish recruitment in the CCS. Wind forcing of the CCS shifted in the late 1990s when the STI advanced 40 days. This shift was followed, with lags of 1–3 years, by 3- to 19-fold increased abundances of five ocean-produced demersal fish and crustaceans and 2.5-fold increase of summer chlorophyll- a in the Bay. These changes reflect a slow biological process of estuary–ocean connectivity operating through the immigration of fish and crustaceans that prey on bivalves, reduce their grazing pressure, and allow phytoplankton biomass to build. We identified clear signals of climate-mediated oceanic variability in this estuary and discovered that the response patterns vary with the process of connectivity and the timescale of ocean variability. This result has important implications for managing nutrient inputs to estuaries connected to upwelling systems, and for assessing their responses to changing patterns of upwelling timing and intensity as the planet continues to warm.

California↗

USGS2009

Defining winter trophic habitat of juvenile Gulf Sturgeon in the Suwannee and Apalachicola rivermouth estuaries, acoustic telemetry investigations

Three automated listening post-telemetry studies were undertaken in the Suwannee and Apalachicola estuaries to gain knowledge of habitats use by juvenile Gulf Sturgeons ( Acipenser oxyrinchus desotoi ) on winter feeding grounds. A simple and reliable method for external attachment of small acoustic tags to the dorsal fin base was developed using shrink-tubing. Suspending receivers on masts below anchored buoys improved reception and facilitated downloading; a detection range of 500–2500 m was realized. In the Apalachicola estuary, juvenile GS stayed in shallow water (< 2 m) within the estuarine transition zone all winter in the vicinity of the Apalachicola River mouth. Juvenile GS high-use areas did not coincide with high density benthic macrofauna areas from the most recent (1999) benthos survey. In the Suwannee estuary, juveniles ranged widely and individually throughout oligohaline to mesohaline subareas of the estuary, preferentially using mesohaline subareas seaward of Suwannee Reef (52% of acoustic detections). The river mouth subarea was important only in early and late winter, during the times of adult Gulf Sturgeon migrations (41% of detections). Preferred winter feeding subareas coincided spatially with known areas of dense macrofaunal benthos concentrations. Following a dramatic drop in air and water temperatures, juvenile GS left the river mouth and estuary, subsequently being detected 8 km offshore in polyhaline open Gulf of Mexico waters, before returning to the estuary. Cold-event offshore excursions demonstrate that they can tolerate full-salinity polyhaline waters in the open Gulf of Mexico, for at least several days at a time. For juvenile sturgeons, the stress and metabolic cost of enduring high salinity (Jarvis et al., 2001; McKenzie et al., 2001; Singer and Ballantyne, 2002) for short periods in deep offshore waters seems adaptively advantageous relative to the risk of cold-event mortality in shallow inshore waters of lower salinity. Thus, while juveniles can tolerate high salinities for days to weeks to escape cold events, they appear to make only infrequent use of open polyhaline waters. Throughout the winter foraging period, juvenile GS stayed primarily within the core area of Suwannee River mouth influence, extending about 12 km north and south of the river mouth, and somewhat seaward of Suwannee Reef (< 5 km offshore). None were detected departing the core area past either of the northern or southern acoustic gates, located 66 and 52 km distant from the river mouth, respectively.

Florida↗

USGS1981

The freshwater‐inflow‐to‐estuaries issue

Over 55% of the United States commercial fish and shellfish catch is dependent upon estuaries for spawning and nursery functions, but estuaries cannot function ecologically without an adequate supply, seasonal inflow, and quality of freshwater from inland rivers. Such inland river development projects as constructing reservoirs, leveeing rivers, dredging navigation channels, and diverting water for agriculture, cities, and industry have drastically changed freshwater inflows to many estuaries on the Atlantic and Pacific coasts and the Gulf of Mexico. The problems on the Atlantic coast are primarily reduced water quality and increased rate of runoff although reductions in quantity appear to be developing. On the Gulf of Mexico decreases in freshwater inflow quantity have reduced estuarine production on the Florida and Texas coasts. On the highly productive Mississippi Delta, levee and navigation channel construction has diverted river inflow to the Gulf of Mexico rather than allowing overflow to the estuarine habitats; this has resulted in saltwater intrusion and marsh erosion. On the Pacific coast, inflow to the San Francisco Bay complex has been reduced by over 50%, resulting in drastic estuarine changes. Studies on freshwater inflow are underway in Chesapeake Bay, Louisiana, Texas, and the San Francisco Bay complex. The freshwater‐inflow‐to‐estuary problem can be addressed by (1) considering the ecological effects of proposed inland water projects on estuarine production and communities; (2) developing nationwide criteria for evaluating the freshwater needs of estuaries; (3) refining methods for defining the economic and noneconomic benefit of freshwater inflow to estuaries; and (4) using existing laws and directives more effectively.

Fisheries↗

USGS2011

Seasonal Distribution and Movements of Atlantic and Shortnose Sturgeon in the Penobscot River Estuary, Maine

Relatively little is known about the distribution and seasonal movement patterns of shortnose sturgeon Acipenser brevirostrum and Atlantic sturgeon Acipenser oxyrinchus oxyrinchus occupying rivers in the northern part of their range. During 2006 and 2007, 40 shortnose sturgeon (66–113.4 cm fork length [FL]) and 8 Atlantic sturgeon (76.2–166.2 cm FL) were captured in the Penobscot River, Maine, implanted with acoustic transmitters, and monitored using an array of acoustic receivers in the Penobscot River estuary and Penobscot Bay. Shortnose sturgeon were present year round in the estuary and overwintered from fall (mid-October) to spring (mid-April) in the upper estuary. In early spring, all individuals moved downstream to the middle estuary. Over the course of the summer, many individuals moved upstream to approximately 2 km of the downstream-most dam (46 river kilometers [rkm] from the Penobscot River mouth [rkm 0]) by August. Most aggregated into an overwintering site (rkm 36.5) in mid- to late fall. As many as 50% of the tagged shortnose sturgeon moved into and out of the Penobscot River system during 2007, and 83% were subsequently detected by an acoustic array in the Kennebec River, located 150 km from the Penobscot River estuary. Atlantic sturgeon moved into the estuary from the ocean in the summer and concentrated into a 1.5-km reach. All Atlantic sturgeon moved to the ocean by fall, and two of these were detected in the Kennebec River. Although these behaviors are common for Atlantic sturgeon, regular coastal migrations of shortnose sturgeon have not been documented previously in this region. These results have important implications for future dam removals as well as for rangewide and river-specific shortnose sturgeon management.

Maine↗

USGS2001

Water budget for the Nueces Estuary, Texas, May-October 1998

The Texas Water Development Board (TWDB), Texas Parks and Wildlife Department (TPWD), and Texas Natural Resource Conservation Commission (TNRCC) are charged by the Texas Legislature with determining freshwater inflows required to maintain the ecological health of streams, bays, and estuaries in Texas. To determine required inflows, the three agencies collect data and conduct studies on the needs for freshwater inflows to Texas estuaries. The U.S. Geological Survey (USGS), in cooperation with the TWDB, conducted a study in the Nueces estuary (fig. 1) during May–October 1998 to provide water-budget data for calibration of a TWDB model that will be used to estimate the effects of different freshwater inflow volumes on circulation and salinity in the estuary. The water budget (inflows and outflows) for the Nueces estuary was estimated by using (1) data collected during this study, (2) data collected at two upstream streamflow-gaging stations previous to this study, and (3) evaporation and return-flow data obtained from other agencies. This fact sheet describes the data-collection methods and the results of the water-budget estimates for the Nueces estuary.

Texas↗