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USGS2018

Dynamics of gene expression responses for ion transport proteins and aquaporins in the gill of a Euryhaline Pupfish during freshwater and high salinity acclimation

Pupfishes (genus Cyprinodon ) evolved some of the broadest salinity tolerances of teleost fishes, with some taxa surviving in conditions from freshwater to nearly 160 ppt. In this study, we examined transcriptional dynamics of ion transporters and aquaporins in the gill of the desert Amargosa pupfish ( Cyprinodon nevadensis amargosae ) during rapid salinity change. Pupfish acclimated to 7.5 ppt were exposed to freshwater (0.3 ppt), seawater (35 ppt), or hypersaline (55 ppt) conditions over 4 h and sampled at these salinities over 14 d. Plasma osmolality and Cl − concentration became elevated 8 h after the start of exposure to 35 or 55 ppt but returned to baseline levels after 14 d. Osmolality recovery was paralleled by increased gill Na + /K + -ATPase activity and higher relative levels of messenger RNAs (mRNAs) encoding cystic fibrosis transmembrane conductance regulator ( cftr ) and Na + /K + /2Cl − cotransporter-1 ( nkcc1 ). Transcripts encoding one Na + -HCO 3 − cotransporter-1 isoform ( nbce1.1 ) also increased in the gills at higher salinities, while a second isoform ( nbce1.2 ) increased expression in freshwater. Pupfish in freshwater also had lower osmolality and elevated gill mRNAs for Na + /H + exchanger isoform-2a ( nhe2a ) and V-type H + -ATPase within 8 h, followed by increases in Na + /H + exchanger-3 ( nhe3 ), carbonic anhydrase 2 ( ca2 ), and aquaporin-3 ( aqp3 ) within 1 d. Gill mRNAs for Na + /Cl − cotransporter-2 ( ncc2 ) also were elevated 14 d after exposure to 0.3 ppt. These results offer insights into how coordinated transcriptional responses for ion transporters in the gill facilitate reestablishment of osmotic homeostasis after changes in environmental salinity and provide evidence that the teleost gill expresses two Na + -HCO 3 − cotransporter-1 isoforms with different roles in freshwater and seawater acclimation.

Physiological and Biochemical Zoology↗

USGS2009

A quarter-million years of paleoenvironmental change at Bear Lake, Utah and Idaho

A continuous, 120-m-long core (BL00-1) from Bear Lake, Utah and Idaho, contains evidence of hydrologic and environmental change over the last two glacial-interglacial cycles. The core was taken at 41.95??N, 111.31??W, near the depocenter of the 60-m-deep, spring-fed, alkaline lake, where carbonate-bearing sediment has accumulated continuously. Chronological control is poor but indicates an average sedimentation rate of 0.54 mm yr -1 . Analyses have been completed at multi-centennial to millennial scales, including (in order of decreasing temporal resolution) sediment magnetic properties, oxygen and carbon isotopes on bulk-sediment carbonate, organic- and inorganiccarbon contents, palynology; mineralogy (X-ray diffraction), strontium isotopes on bulk carbonate, ostracode taxonomy, oxygen and carbon isotopes on ostracodes, and diatom assemblages. Massive silty clay and marl constitute most of the core, with variable carbonate content (average = 31 ?? 19%) and oxygen-isotopic values (?? 18 O ranging from -18??? to -5??? in bulk carbonate). These variations, as well as fluctuations of biological indicators, reflect changes in the water and sediment discharged from the glaciated headwaters of the dominant tributary, Bear River, and the processes that influenced sediment delivery to the core site, including lake-level changes. Although its influence has varied, Bear River has remained a tributary to Bear Lake during most of the last quarter-million years. The lake disconnected from the river and, except for a few brief excursions, retracted into a topographically closed basin during global interglaciations (during parts of marine isotope stages 7, 5, and 1). These intervals contain up to 80% endogenic aragonite with high ?? 18 O values (average = -5.8 ?? 1.7???), indicative of strongly evaporitic conditions. Interglacial intervals also are dominated by small, benthic/tychoplanktic fragilarioid species indicative of reduced habitat availability associated with low lake levels, and they contain increased high-desert shrub and Juniperus pollen and decreased forest and forest-woodland pollen. The 87 Sr 86 Sr values (>0.7100) also increase, and the ratio of quartz to dolomite decreases, as expected in the absence of Bear River in flow. The changing paleoenvironments inferred from BL00-1 generally are consistent with other regional and global records of glacialinterglacial fluctuations; the diversity of paleoenvironmental conditions inferred from BL00-1 also reflects the influence of catchment-scale processes. Copyright ?? 2009 The Geological Society of America.

Special Paper of the Geological Society of America↗

USGS2001

Assessing large-scale surveyor variability in the historic forest data of the original U.S. Public Land Survey

The U.S. General Land Office Public Land Survey (PLS) records are a valuable resource for studying pre-European settlement vegetation. However, these data were taken for legal, not ecological, purposes. In turn, the instructions the surveyors followed affected the data collected. For this reason, it has been suggested that the PLS data may not truly represent the surveyed landscapes. This study examined the PLS data of northern Wisconsin, U.S.A., to determine the extent of variability among surveyors. We statistically tested for differences among surveyors in recorded tree species, size, location, and distance from the survey point. While we cannot rule out effects from other influences (e.g., environmental factors), we found evidence suggesting some level of surveyor bias for four of five variables, including tree species and size. The PLS data remain one of the best records of pre-European settlement vegetation available. However, based on our findings, we recommend that projects using PLS records examine these data carefully. This assessment should include not only the choice of variables to be studied but also the spatial extent at which the data will be examined.

Canadian Journal of Forest Research↗

USGS2026

High-resolution landscape-scale maps of nutrients, phytoplankton, and related water-quality constituents in Suisun Bay and the Sacramento–San Joaquin Delta, California, during 2018—Results from high-resolution underway surveys

We examined the abundance and distribution of nutrients and phytoplankton in the tidal aquatic environments of the Sacramento–San Joaquin Delta (Delta) and Suisun, Grizzly, and Honker Bays in California by completing three spatial surveys that used continuous underway high frequency (1 hertz) measurements and sampling onboard a high-speed boat. Surveys were conducted in May, July, and October 2018. Water was sampled continuously during surveys to simultaneously collect information about the concentration and spatial distribution of all major nutrient forms together with information about the major classes of phytoplankton and associated standard field measurements of water quality, such as dissolved oxygen, dissolved organic matter, pH, salinity, specific conductance, turbidity, and water temperature. The results show a greater than 50-fold variation in nutrient and phytoplankton concentrations across space and time, providing evidence of the dynamic environmental processes that shape the ways nutrients interact with and affect Delta aquatic habitats.

California↗

USGS1998

Water quality in the vicinity of Mosquito Creek Lake, Trumbull County, Ohio, in relation to the chemistry of locally occurring oil, natural gas, and brine

Environmental samples collected in the Mosquito Creek Lake area were used to characterize water quality in relation to the chemistry of locally occurring oil, natural gas, and brine and to establish baseline water quality. Mosquito Creek Lake (a manmade reservoir) and the shallow bedrock aquifers near the lake are major sources of potable water in central Trumbull County. The city of Warren relies on the lake as a sole source of potable water. Some of the lake bottom may be in direct hydraulic connection with the underlying aquifers. The city of Cortland, along the southeastern shore of the lake, relies on the Cussewago Sandstone aquifer as a sole source of potable water. This aquifer subcrops beneath the glacio-fluvial sediments that underlie the lake. Nearly all residential homes around the lake, with the exception of homes in the city of Cortland, rely on domestic supply wells as a source of potable water. Oil and natural gas exploration and production have been ongoing in the Mosquito Creek Lakearea since the discovery of the historic Mecca Oil Pool in the Mississippian Berea and Cussewago Sandstones in 1860. Since the late 1970' s, the major drilling objective and zone of production is the Lower Silurian Clinton sandstone. The oil and natural gas resources of the Mosquito Creek Lake area, including reservoir pressure, production history, and engineering and abandonment practices are described in this report. The chemical and isotopic characteristics of the historic Mecca oil and natural gas are very different than those of the Clinton sandstone oil and natural gas. Gas chromatograms show that Mecca oil samples are extensively altered by biodegradation, whereas Clinton sandstone oils are not. Extensive alteration of Mecca oil is consistent with their occurrence at very shallow depths (less than 100 ft below land surface) where microbial activity can affect their composition. Also, the carbon-isotope composition of dissolved methane gas from Berea and Cussewago Sandstone water samples indicates that the gas is microbially generated, whereas the Clinton sandstone gases are thermogenically generated. Methane gas, in addition to crude oil, occurs naturally in the shallow Berea and Cussewago Sandstone aquifers in the Mosquito Creek Lake area and concentrations of dissolved methane are significant in the city of Cortland public-supply wells and in the domestic-supply wells near the southern shore of the lake. Water associated with oil and gas in the Clinton sandstone is a brine with high concentrations of chloride. Water from the Berea and Cussewago Sandstones, however, is fresh and potable. The contrasting geochemical characteristics are important for addressing water-quality issues that relate to oil and natural gas development in the Mosquito Creek area. A reexamination of the geologic framework and results of a subsurface-gas survey show that crude oil in the historic Mecca Oil Pool probably does not seep into Mosquito Creek Lake. Environmental samples show no evidence of any measurable release of oil, gas, or brine from the deeper Clinton sandstone oil and gas wells to the shallow aquifers, the lake, or lake tributaries. Brine is not associated with the hydrocarbons in the shallow Berea-Cussewago aquifer system and therefore cannot be a source of brine contamination. A mixing diagram constructed for dissolved bromide and chloride in surface water and water-supply wells shows no demonstrable mixing of these water resources with brine from the Clinton sandstone. There is some notable salinity in surface waters; however, the water is bromide poor, and a mixing diagram indicates that some local ground waters are influenced by halite solutions, presumably derived from leaching of road salt or from septic effluent.

Ohio↗

USGS2002

Sources, fate, and effects of PAHs in shallow water environments: a review with special reference to small watercraft

Polycyclic aromatic hydrocarbons (PAHs) are aromatic hydrocarbons with two to seven fused carbon (benzene) rings that can have substituted groups attached. Shallow coastal, estuarine, lake, and river environments receive PAHs from treated wastewater, stormwater runoff, petroleum spills and natural seeps, recreational and commercial boats, natural fires, volcanoes, and atmospheric deposition of combustion products. Abiotic degradation of PAHs is caused by photooxidation, photolysis in water, and chemical oxidation. Many aquatic microbes, plants, and animals can metabolize and excrete ingested PAHs; accumulation is associated with poor metabolic capabilities, high lipid content, and activity patterns or distributions that coincide with high concentrations of PAHs. Resistance to biological transformation increases with increasing number of carbon rings. Four- to seven-ring PAHs are the most difficult to metabolize and the most likely to accumulate in sediments. Disturbance by boating activity of sediments, shorelines, and the surface microlayer of water causes water column re-entry of recently deposited or concentrated PAHs. Residence time for PAHs in undisturbed sediment exceeds several decades. Toxicity of PAHs causes lethal and sublethal effects in plants and animals, whereas some substituted PAHs and metabolites of some PAHs cause mutations, developmental malformations, tumors, and cancer. Environmental concentrations of PAHs in water are usually several orders of magnitude below levels that are acutely toxic, but concentrations can be much higher in sediment. The best evidence for a link between environmental PAHs and induction of cancerous neoplasms is for demersal fish in areas with high concentrations of PAHs in the sediment.

Book chapter↗

USGS2000

Influence of calcium on the distribution of the pheasant in North America

Rapid Bioassessment Protocols (RBP) and the Sediment Quality Triad (SQT) were used to evaluate the biological effects of a municipal waste-water treatment facility (WWTF) on a small southern stream. During major storm events, raw sewage from the WWTF is released directly into the stream. The headwaters of the stream also receive non-point surface runoff from urban areas. RBP analyses, which included benthos, fish and habitat evaluations, and SQT, including the benthos (from the RBP), contaminant analyses (metals, organochlorine pesticides, PCBs and PAHs) andl toxicity tests of depositional sediment (exposures of Hyalella azteca to solid-phase sediment and pore water) were conducted at five sites on the stream (two upstream of the WWTF and three downstream). The stream has been channelized throughout its entire length, resulting in high, unstable banks, degraded stream channel, and unstable substratum. RBP analyses indicated that the two stations upstream of the WWTF were degraded due to poor physical habitat quality (unstable benthic substratum and lack of fish habitat). The SQT also showed reduced habitat quality at the two stations above the WWTF, but the cause was attributed to high concentrations of PAHs and metals in the sediments. The increased discharge and stabilized base flow provided by the WWTF improved habitat quality downnstream, although conditions were still impaired due to the habitat alteration. Though the causes of degradation were attributed to different factors (physical habitat vs. contamination), there was close concordance between the RBP and SQT in identifying the degraded sites in this stream. The combination of these two procedures provides a robust examination of environmental quality utilizing the weight of evidence approach.

Society of Environmental Toxicology and Chemistry,↗

USGS1989

Late Quaternary paleolimnology of Walker Lake, Nevada

Diatoms, crustaceans, and pollen from sediment cores, in conjunction with dated shoreline tufas provide evidence for lake level and environmental fluctuations of Walker Lake in the late Quaternary. Large and rapid changes of lake chemistry and level apparently resulted from variations in the course and discharge of the Walker River. Paleolimnological evidence suggests that the basin contained a relatively deep and slightly saline to freshwater lake before ca. 30 000 years B.P. During the subsequent drawdown, the Walker River apparently shifted its course and flowed northward into the Carson Sink. As a result, Walker Lake shallowed and became saline. During the full glacial, cooler climates with more effective moisture supported a shallow brine lake in the basin even without the Walker River. As glacial climates waned after 15 000 years ago, Walker Lake became a playa. The Walker River returned to its basin 4700 years ago, filling it with fresh water in a few decades. Thereafter, salinity and depth increased as evaporation concentrated inflowing water, until by 3000 years ago Walker Lake was nearly 90 m deep, according to dated shoreline tufas. Lake levels fluctuated throughout this interval in response to variations in Sierra Nevada precipitation and local evaporation. A drought in the Sierras between 2400 and 2000 years ago reduced Walker Lake to a shallow, brine lake. Climate-controlled refilling of the lake beginning 2000 years ago required about one millennium to bring Walker lake near its historic level. Through time, lake basins in the complex Lake Lahontan system, fill and desiccate in response to climatic, tectonic and geomorphic events. Detailed, multidisciplinary paleolimnologic records from related subbasins are required to separate these processes before lake level history can be reliably used to interpret paleoclimatology. ?? 1989 Kluwer Academic Publishers.

Journal of Paleolimnology↗

USGS1995

Reproductive impairment in the Florida panther: Nature or nurture?

Many of the remaining members of the endangered Florida panther (Felis concolor coryi) population suffer from one or more of a variety of physiological, reproductive, endocrine, and immune system defects including congenital heart defects, abnormal sperm, low sperm density, cryptorchidism, thyroid dysfunction, and possible immunosuppression. Mercury contamination, determined to be the cause of death of a female panther in 1989, was presented as the likely cause of thyroid dysfunction. As genetic diversity in the species was less than expected, all of the other abnormalities have been attributed to inbreeding. However, exposure to a variety of chemical compounds, especially those that have been identified as environmental endocrine disrupters (including mercury, p,p'-DDE, and polychlorinated biphenyls), has elicited all of the listed abnormalities in other species. A number of these contaminants are present in South Florida. An exposure pathway has been identified, and evidence presented in this paper, including the fact that there appears to be no significant difference between serum estradiol levels in males and females, suggests that many male panthers may have been demasculinized and feminized as a result of either prenatal or postnatal exposure. Thus, regardless of the effects of inbreeding, current evidence seems to indicate that environmental contaminants may be a major factor contributing to reproductive impairment in the Florida panther population.

Environmental Health Perspectives↗

USGS2010

Protein expression and genetic structure of the coral Porites lobata in an environmentally extreme Samoan back reef: Does host genotype limit phenotypic plasticity?

The degree to which coral reef ecosystems will be impacted by global climate change depends on regional and local differences in corals' susceptibility and resilience to environmental stressors. Here, we present data from a reciprocal transplant experiment using the common reef building coral Porites lobata between a highly fluctuating back reef environment that reaches stressful daily extremes, and a more stable, neighbouring forereef. Protein biomarker analyses assessing physiological contributions to stress resistance showed evidence for both fixed and environmental influence on biomarker response. Fixed influences were strongest for ubiquitin-conjugated proteins with consistently higher levels found in back reef source colonies both pre and post-transplant when compared with their forereef conspecifics. Additionally, genetic comparisons of back reef and forereef populations revealed significant population structure of both the nuclear ribosomal and mitochondrial genomes of the coral host (F ST = 0.146 P < 0.0001, F ST = 0.335 P < 0.0001 for rDNA and mtDNA, respectively), whereas algal endosymbiont populations were genetically indistinguishable between the two sites. We propose that the genotype of the coral host may drive limitations to the physiological responses of these corals when faced with new environmental conditions. This result is important in understanding genotypic and environmental interactions in the coral algal symbiosis and how corals may respond to future environmental changes. ?? 2010 Blackwell Publishing Ltd.

Molecular Ecology↗

USGS2020

Revised perspectives on Devonian biozonation and environmental volatility in the wake of recent time-scale revisions

Revised time-scales for the Devonian Period have highlighted major discrepancies in the frequency of evolutionary, eustatic, carbon cycle, and biotic events. The number of conodont biozones per million years shows strong variation among stages. Using two alternative time scales, the lowest values are in the Emsian and highest in the Givetian, Frasnian, and Famennian stages. A similar result is obtained by dividing the Devonian time scale into 12 equal 5-million year bins and determining the number of conodont zonal subdivisions in each bin. The record of ammonoid biozones also shows interesting parallels. The acuity of biostratigraphic zonation and zonal subdivisions appears to be correlative with the frequency of environmental perturbations, including eustatic, positive carbon isotopic excursions, and hypoxic/anoxic related bioevents, and these are similarly unevenly distributed. All calculations of environmental volatility metrics show the late Eifelian through early Frasnian to be the most volatile interval of the Devonian, followed by the mid-late Famennian, while the Lochkovian through Emsian and mid-Frasnian through early Famennian are the least volatile. Furthermore, the majority of major bioevents occur in the Eifelian through early Frasnian, and late Famennian. The strong evidence for higher biotic and environmental volatility in the late Eifelian through early Frasnian and late Famennian rock record corresponds to the coolest paleoclimate conditions in the Devonian according to recent conodont apatite δ18O compilations, and the transition from an overall cooling to warming paleotemperature trend during the mid-Givetian. Regardless of mechanism, strong variations in volatility occurred during the Devonian Period. Intervals with greater biostratigraphic resolution also show much stronger environmental volatility including a series of relatively quasi-stable conditions punctuated by major turnovers with abrupt sea-level rise, widespread hypoxia, and changes in the carbon cycle. It was during these intervals that much net evolutionary and ecological change appears to have taken place.

Palaeogeography, Palaeoclimatology, Palaeoecology↗

USGS2026

Modeling chronic wasting disease transmission risk in mule deer related to habitat characteristics

Chronic wasting disease (CWD) is a prion disease of cervids that spreads to uninfected individuals through direct transmission (contact with infected individuals), vertical transmission (from mother to offspring), or indirect transmission (exposure to contaminated environments). The risk of indirect transmission is unevenly distributed on the landscape, and risk levels are expected to be controlled by patterns of habitat use by infected and uninfected individuals as well as environmental properties that alter the length of time prions remain infectious and available for uptake. Despite evidence from controlled or laboratory studies identifying environmental properties likely to affect patterns of CWD prion locations on the landscape, it remains difficult to connect mechanisms to realized increased or decreased risk of disease transmission, and few studies have attempted to detect patterns of different CWD risk in different environments. Using data from GPS-collared mule deer in Wyoming that were CWD-tested annually, we constructed models predicting annual probability of disease transmission contingent on environmental properties extracted from GPS use points. We compared models that emphasized different pathways of disease transmission by including or excluding sets of covariates that described deer density, habitat selection, and covariates expected to affect prion persistence in the environment. Results indicated that key habitat characteristics often selected by mule deer, such as proximity to secondary roads, were also associated with higher risk of testing positive for CWD, which supports the hypothesis that disease risk was correlated to patterns of habitat use by deer. We also found increased risk associated with spatial properties that were not selected-for by deer, such as areas where topography collects moisture, suggesting that prion retention mechanisms also play a role in risk. Incorporating these spatially-varying risk factors into our understanding of CWD transmission and outbreak progression can support managers in designing data collection and disease management strategies.

Wyoming↗

USGS2003

Toxicity of lead-contaminated sediment to mute swans

Most ecotoxicological risk assessments of wildlife emphasize contaminant exposure through ingestion of food and water. However, the role of incidental ingestion of sediment-bound contaminants has not been adequately appreciated in these assessments. This study evaluates the toxicological consequences of contamination of sediments with metals from hard-rock mining and smelting activities. Lead-contaminated sediments collected from the Coeur d'Alene River Basin in Idaho were combined with either a commercial avian maintenance diet or ground rice and fed to captive mute swans ( Cygnus olor ) for 6 weeks. Experimental treatments consisted of maintenance or rice diets containing 0, 12 (no rice group), or 24% highly contaminated (3,950 μg/g lead) sediment or 24% reference (9.7 μg/g lead) sediment. Although none of the swans died, the group fed a rice diet containing 24% lead-contaminated sediment were the most severely affected, experiencing a 24% decrease in mean body weight, including three birds that became emaciated. All birds in this treatment group had nephrosis; abnormally dark, viscous bile; and significant (p ≤ 0.05) reductions in hematocrit and hemoglobin concentrations compared to their pretreatment levels. This group also had the greatest mean concentrations of lead in blood (3.2 μg/g), brain (2.2 μg/g), and liver (8.5 μg/g). These birds had significant (α = 0.05) increases in mean plasma alanine aminotransferase activity, cholesterol, and uric acid concentrations and decreased plasma triglyceride concentrations compared to all other treatment groups. After 14 days of exposure, mean protoporphyrin concentrations increased substantially, and mean δ-aminolevulinic acid dehydratase activity decreased by more than 95% in all groups fed diets containing highly contaminated sediments. All swans fed diets that contained 24% lead-contaminated sediment had renal acid-fast intranuclear inclusion bodies, which are diagnostic of lead poisoning in waterfowl. Body weight and hematocrit and hemoglobin concentrations in swans on control (no sediment) and reference (uncontaminated) sediment diets remained unchanged. These data provide evidence that mute swans consuming environmentally relevant concentrations of Coeur d'Alene River Basin sediment developed severe sublethal lead poisoning. Furthermore, toxic effects were more pronounced when the birds were fed lead-contaminated sediment combined with rice, which closely resembles the diet of swans in the wild.

Archives of Environmental Contamination and Toxico↗

USGS2004

Determination of pharmaceutical compounds in surface- and ground-water samples by solid-phase extraction and high-performance liquid chromatography-electrospray ionization mass spectrometry

Commonly used prescription and over-the-counter pharmaceuticals are possibly present in surface- and ground-water samples at ambient concentrations less than 1 μg/L. In this report, the performance characteristics of a combined solid-phase extraction isolation and high-performance liquid chromatography–electrospray ionization mass spectrometry (HPLC–ESI-MS) analytical procedure for routine determination of the presence and concentration of human-health pharmaceuticals are described. This method was developed and used in a recent national reconnaissance of pharmaceuticals in USA surface waters. The selection of pharmaceuticals evaluated for this method was based on usage estimates, resulting in a method that contains compounds from diverse chemical classes, which presents challenges and compromises when applied as a single routine analysis. The method performed well for the majority of the 22 pharmaceuticals evaluated, with recoveries greater than 60% for 12 pharmaceuticals. The recoveries of angiotensin-converting enzyme inhibitors, a histamine (H2) receptor antagonist, and antihypoglycemic compound classes were less than 50%, but were retained in the method to provide information describing the potential presence of these compounds in environmental samples and to indicate evidence of possible matrix enhancing effects. Long-term recoveries, evaluated from reagent-water fortifications processed over 2 years, were similar to initial method performance. Method detection limits averaged 0.022 μg/L, sufficient for expected ambient concentrations. Compound-dependent matrix effects on HPLC/ESI-MS analysis, including enhancement and suppression of ionization, were observed as a 20–30% increase in measured concentrations for three compounds and greater than 50% increase for two compounds. Changing internal standard and more frequent ESI source maintenance minimized matrix effects. Application of the method in the national survey demonstrates that several pharmaceuticals are routinely detected at 0.010–0.100 μg/L concentrations.

Journal of Chromatography A↗

USGS2023

Triple oxygen isotope compositions of globally distributed soil carbonates record widespread evaporation of soil waters

The stable isotopic composition of pedogenic carbonates is central to many studies of past climate and topography, providing a basis for our understanding of Earth's terrestrial history. A core assumption of many applications of oxygen isotope values (δ18O) of pedogenic carbonate is that they reflect the δ18O value of precipitation (rain/snow). This assumption is violated if soil carbonates form in evaporated soil waters. In this work, we develop a means to identify evaporation in ancient soils using the triple oxygen isotope composition (16O-17O-18O) of pedogenic carbonates. Both theoretical predictions of isotope kinetics during evaporation and studies of triple oxygen isotopes in other geological materials show that the deviation in the relationship between δ17O and δ18O from a reference line, evaluated using the parameter Δ'17O, is sensitive to evaporation. As a first step in developing the use of Δ'17O in ancient pedogenic carbonates, we report Δ'17O values from 47 near-modern pedogenic carbonate samples from globally distributed environments that vary in aridity (hyper-arid to humid). The Δ'17O values of pedogenic carbonate range from -154 to -60 per meg (as CaCO3, measured via O2, VSMOW-SLAP), corresponding to calculated soil water values of -66 to +27 per meg (VSMOW-SLAP) (using a carbonate-water triple oxygen isotope fractionation exponent of 0.5250 and clumped isotope-derived carbonate growth temperatures). The Δ'17O values indicate that evaporative modification of soil water from which pedogenic carbonate forms is common, especially in arid environments. Arid environments host pedogenic carbonates formed from soil waters ranging from highly to minimally evaporated, while humid environments host pedogenic carbonates formed from waters that are only minimally evaporated. The variability in Δ'17O within environments classified by the same aridity may relate to the fact that pedogenic carbonates record soil conditions only during times of carbonate mineralization, which may deviate from annual conditions. Thus, Δ'17O may be useful in understanding the specific circumstances of pedogenic carbonate formation but may not provide incontrovertible evidence of the magnitude of environmental aridity. Evaporative modification of δ18O values of pedogenic carbonates can be detected with Δ'17O, thereby improving estimates of δ18O of unevaporated waters. Our data show that evaporation must be (re)considered for all paleoclimate inferences based on the δ18O of pedogenic carbonate. The addition of Δ'17O will re-energize paleoclimate studies that use (or have avoided using) δ18O of pedogenic carbonate.

Geochimica et Cosmochimica Acta↗

USGS2016

Resource subsidies between stream and terrestrial ecosystems under global change

Streams and adjacent terrestrial ecosystems are characterized by permeable boundaries that are crossed by resource subsidies. Although the importance of these subsidies for riverine ecosystems is increasingly recognized, little is known about how they may be influenced by global environmental change. Drawing from available evidence, in this review we propose a conceptual framework to evaluate the effects of global change on the quality and spatiotemporal dynamics of stream–terrestrial subsidies. We illustrate how changes to hydrological and temperature regimes, atmospheric CO 2 concentration, land use and the distribution of nonindigenous species can influence subsidy fluxes by affecting the biology and ecology of donor and recipient systems and the physical characteristics of stream–riparian boundaries. Climate-driven changes in the physiology and phenology of organisms with complex life cycles will influence their development time, body size and emergence patterns, with consequences for adjacent terrestrial consumers. Also, novel species interactions can modify subsidy dynamics via complex bottom-up and top-down effects. Given the seasonality and pulsed nature of subsidies, alterations of the temporal and spatial synchrony of resource availability to consumers across ecosystems are likely to result in ecological mismatches that can scale up from individual responses, to communities, to ecosystems. Similarly, altered hydrology, temperature, CO 2 concentration and land use will modify the recruitment and quality of riparian vegetation, the timing of leaf abscission and the establishment of invasive riparian species. Along with morphological changes to stream–terrestrial boundaries, these will alter the use and fluxes of allochthonous subsidies associated with stream ecosystems. Future research should aim to understand how subsidy dynamics will be affected by key drivers of global change, including agricultural intensification, increasing water use and biotic homogenization. Our conceptual framework based on the match–mismatch between donor and recipient organisms may facilitate understanding of the multiple effects of global change and aid in the development of future research questions.

Global Change Biology↗

USGS2018

Discharge, sediment, and water chemistry in Clear Creek, western Nevada, water years 2013–16

Clear Creek is a small stream that drains the eastern Carson Range near Lake Tahoe, flows roughly parallel to the Highway 50 corridor, and discharges to the Carson River near Carson City, Nevada. Historical and ongoing development in the drainage basin is thought to be affecting Clear Creek and its sediment-transport characteristics. Previous studies from water years (WYs) 2004 to 2007 and from 2010 to 2012 evaluated discharge, selected water-quality parameters, and suspended-sediment concentrations, loads, and yields at three Clear Creek sampling sites. This report serves as a continuation of the data collection and analyses of the Clear Creek discharge regime and associated water-chemistry and sediment concentrations and loads during WYs 2013–16. Total annual sediment loads ranged from 870 to 5,300 tons during WYs 2004–07, from 320 to 1,770 tons during WYs 2010–12, and from 50 to 200 tons during WYs 2013–16. Ranges in annual loads during the three study periods were not significantly different; however, total loads were greater during 2004–07 than they were during 2013–16. Annual suspended-sediment loads in WYs 2013–16 showed no significant change since WYs 2010–12 at sites 1 (U.S. Geological Survey reference site 10310485; Clear Creek above Highway 50, near Spooner Summit, Nevada) or 2 (U.S. Geological Survey streamgage 10310500; Clear Creek above Highway 50, near Spooner Summit, Nevada), but significantly lower loads at site 3 (U.S. Geological Survey site 10310518; Clear Creek at Fuji Park, at Carson City, Nevada), supporting the theory of sediment deposition between sites 2 and 3 where the stream gradient becomes more gradual. Currently, a threshold discharge of about 3.3 cubic feet per second is required to mobilize streambed sediment (bedload) from site 2 in Clear Creek. Mean daily discharge was significantly lower in 2010–12 than in 2004–07 and also significantly lower in 2013–16 than in 2010–12. During this study, lower bedload, and therefore lower total sediment load in Clear Creek was primarily due to significantly lower discharge and cannot be directly attributed to sediment mitigation work in the basin. Water chemistry in Clear Creek shows that the general water type of the creek under base-flow conditions in autumn is a dilute calcium bicarbonate. During winter and spring, the chemistry shifts toward a slightly more sodium and chloride character. Though the chemical characteristics show seasonal change, the water chemistries examined as part of this investigation remain within ecological criteria as adopted by the Nevada Division of Environmental Protection. There was no evidence of aqueous polynuclear aromatic hydrocarbons (PAHs) present in Clear Creek water during this study. Concentrations of PAHs, as determined in one bed-sediment sample and multiple semi-permeable membrane device extracts, were either less than quantifiable limits of analysis or were found at similar concentrations as blank samples. In July 2014, a 250–300-acre fire burned in the Clear Creek drainage basin. One day after the fire was extinguished, a thunderstorm washed sediment into the creek. A water chemistry sample collected as part of the post-fire storm event showed that the stormwater entering the creek had increased the concentrations of ammonium and organic nitrogen, phosphorus, manganese, and potassium; a similar finding of many other studies evaluating the effects of fires in small drainage basins. Subsequent chemical analyses of Clear Creek water in August 2014 (one month later) showed that these constituents had returned to pre-fire concentrations.

Nevada↗

USGS2021

Detecting resource limitation in a large herbivore population is enhanced with measures of nutritional condition

Resource limitation at the population level is a function of forage quality and its abundance relative to its per capita availability, which in turn, determines nutritional condition of individuals. Effects of resource limitation on population dynamics in ungulates often occur through predictable and sequential changes in vital rates, which can enable assessments of how resource limitation influences population growth. We tested theoretical predictions of bottom-up (i.e., resource limitation) forcing on moose ( Alces alces ) through the lens of vital rates by quantifying the relative influence of intrinsic measures of nutritional condition and extrinsic measures of remotely sensed environmental data on demographic rates. We measured rates of pregnancy, parturition, juvenile, and adult survival for 82 adult females in a population where predators largely were absent. Life stage simulation analyses (LSAs) indicated that interannual fluctuations in adult survival contributed to most of the variability in λ. We then extended the LSA to estimate vital rates as a function of bottom-up covariates to evaluate their influence on λ. We detected weak signatures of effects from environmental covariates that were remotely sensed and spatially explicit to each seasonal range. Instead, nutritional condition strongly influenced rates of pregnancy, parturition, and overwinter survival of adults, clearly implicating resource limitation on λ. Our findings depart from the classic life-history paradigm of population dynamics in ungulates in that adult survival was highly variable and generated most of the variability in population growth rates. At the surface, lack of variation explained by environmental covariates may suggest weak evidence of resource limitation in the population, when nutritional condition actually underpinned most demographics. We suggest that variability in vital rates and effects of resource limitation may depend on context more than previously appreciated, and density dependence can obfuscate the relationships between remotely sensed data and demographic rates.

Wyoming↗